FFCP PHASE1:Hg19::chr7:27157924..27157950,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:27157924..27157950,- | |||
|coexpression_cluster_id=C4678 | |||
|description=CAGE_peak_at_chr7:27157924..27157950,- | |||
|id=chr7:27157924..27157950,- | |||
|ontology_enrichment_celltype=CL:0000192!5.47e-17!42;CL:0000514!5.47e-17!42;CL:0000183!9.82e-17!59;CL:0000187!2.86e-14!54;CL:0000680!3.61e-13!57;CL:0000056!3.61e-13!57;CL:0000355!3.61e-13!57;CL:0000393!3.51e-12!60;CL:0000211!3.51e-12!60;CL:1000507!2.81e-10!12;CL:1000494!2.81e-10!12;CL:1000497!5.87e-10!18;CL:0002518!5.87e-10!18;CL:0002539!1.17e-09!10;CL:1000449!3.32e-09!16;CL:0000222!5.83e-09!119;CL:0000359!5.89e-08!32;CL:0002603!4.89e-07!3;CL:0002681!5.27e-07!13;CL:0002584!5.27e-07!13;CL:0000239!6.74e-07!3;CL:1000615!6.74e-07!3;CL:0002306!6.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.29e-19;10!CL:1000494;5.29e-19;10!CL:1000497;1.04e-14;17!CL:0002518;1.04e-14;17!CL:1000449;1.72e-12;15!CL:0002593;4.18e-12;2!CL:0000650;1.32e-11;2!CL:1000500;1.32e-11;2!CL:1000618;1.32e-11;2!CL:1001318;1.32e-11;2!CL:0002173;1.32e-11;2!CL:0002595;8.69e-11;5!CL:0002539;5.98e-09;10!CL:0000239;2.94e-08;3!CL:1000615;2.94e-08;3!CL:0000322;2.94e-08;3!CL:0002306;2.94e-08;3!CL:0000632;5.06e-08;3!CL:0002603;5.06e-08;3!CL:0000359;9.17e-08;32!CL:0002681;2.33e-07;12!CL:0002584;2.33e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.29e-19,10;CL:1000494,3.29e-19,10;CL:1000497,6.28e-15,17;CL:0002518,6.28e-15,17;CL:1000449,1.26e-12,15;CL:0002593,6.17e-12,2;CL:0000650,9.06e-12,2;CL:1000500,9.06e-12,2;CL:1000618,9.06e-12,2;CL:1001318,9.06e-12,2;CL:0002173,9.06e-12,2;CL:0002595,1.10e-10,5;CL:0002539,5.63e-09,10;CL:0000322,2.20e-08,3;CL:0000239,2.74e-08,3;CL:1000615,2.74e-08,3;CL:0002306,2.74e-08,3;CL:0000632,5.85e-08,3;CL:0002603,5.85e-08,3;CL:0000359,1.34e-07,32;CL:0002681,2.00e-07,12;CL:0002584,2.00e-07,12;CL:0000192,4.88e-07,43;CL:0000514,4.88e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.73e-15!113;UBERON:0002100!8.43e-14!216;UBERON:0000466!7.41e-13!126;UBERON:0000464!2.62e-12!104;UBERON:0001134!7.10e-12!61;UBERON:0002036!7.10e-12!61;UBERON:0003082!7.10e-12!61;UBERON:0001135!1.51e-11!15;UBERON:0002385!2.71e-11!63;UBERON:0001015!2.71e-11!63;UBERON:0000383!2.71e-11!63;UBERON:0005256!5.22e-11!143;UBERON:0002417!7.03e-11!61;UBERON:0000916!7.03e-11!61;UBERON:0003914!1.88e-10!118;UBERON:0004573!2.75e-10!33;UBERON:0004571!2.75e-10!33;UBERON:0009773!2.81e-10!12;UBERON:0001231!2.81e-10!12;UBERON:0004810!2.81e-10!12;UBERON:0000080!9.35e-10!18;UBERON:0002120!9.35e-10!18;UBERON:0004875!9.35e-10!18;UBERON:0005721!9.35e-10!18;UBERON:0005754!9.35e-10!18;UBERON:0007297!9.35e-10!18;UBERON:0002113!9.99e-10!27;UBERON:0003918!9.99e-10!27;UBERON:0005095!9.99e-10!27;UBERON:0007687!9.99e-10!27;UBERON:0004237!1.17e-09!10;UBERON:0004695!1.17e-09!10;UBERON:0002111!1.17e-09!10;UBERON:0004178!1.17e-09!10;UBERON:0004290!1.55e-09!70;UBERON:0003886!1.99e-09!63;UBERON:0003104!2.67e-09!238;UBERON:0009142!2.67e-09!238;UBERON:0004211!3.32e-09!16;UBERON:0001285!3.32e-09!16;UBERON:0007684!3.32e-09!16;UBERON:0003220!3.32e-09!16;UBERON:0004208!3.32e-09!16;UBERON:0000058!4.97e-09!26;UBERON:0004876!1.52e-08!20;UBERON:0006555!1.52e-08!17;UBERON:0005103!1.52e-08!17;UBERON:0000083!1.52e-08!17;UBERON:0009201!1.52e-08!17;UBERON:0004819!1.52e-08!17;UBERON:0006553!1.52e-08!17;UBERON:0003074!1.52e-08!17;UBERON:0003060!1.52e-08!17;UBERON:0005177!3.28e-08!107;UBERON:0000481!4.35e-08!347;UBERON:0003887!4.99e-08!21;UBERON:0003688!5.76e-08!6;UBERON:0002358!5.76e-08!6;UBERON:0003684!5.76e-08!6;UBERON:0001178!5.76e-08!6;UBERON:0002553!6.32e-08!70;UBERON:0000025!8.80e-08!194;UBERON:0000947!9.51e-08!21;UBERON:0010191!9.51e-08!21;UBERON:0000489!1.04e-07!32;UBERON:0000475!1.97e-07!365;UBERON:0001637!2.85e-07!42;UBERON:0003509!2.85e-07!42;UBERON:0004572!2.85e-07!42;UBERON:0000486!2.86e-07!82;UBERON:0000914!4.11e-07!83;UBERON:0002329!4.11e-07!83;UBERON:0003077!4.11e-07!83;UBERON:0003059!4.11e-07!83;UBERON:0007282!4.11e-07!83;UBERON:0009618!4.11e-07!83;UBERON:0007285!4.11e-07!83;UBERON:0005172!4.12e-07!55;UBERON:0005173!4.12e-07!55;UBERON:0001225!5.27e-07!13;UBERON:0008987!5.27e-07!13;UBERON:0006853!6.74e-07!3;UBERON:0007685!6.74e-07!3;UBERON:0004134!6.74e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.29e-19;10!UBERON:0009773;5.29e-19;10!UBERON:0001231;5.29e-19;10!UBERON:0004810;5.29e-19;10!UBERON:0006555;1.72e-12;15!UBERON:0004819;1.72e-12;15!UBERON:0001285;1.72e-12;15!UBERON:0007684;1.72e-12;15!UBERON:0002456;4.18e-12;2!UBERON:0003567;1.32e-11;2!UBERON:0003838;1.32e-11;2!UBERON:0003586;1.32e-11;2!UBERON:0005169;1.32e-11;2!UBERON:0002321;1.32e-11;2!UBERON:0005215;1.32e-11;2!UBERON:0002303;1.32e-11;2!UBERON:0002319;1.32e-11;2!UBERON:0003834;8.69e-11;5!UBERON:0001533;8.69e-11;5!UBERON:0002113;3.65e-10;24!UBERON:0011143;3.65e-10;24!UBERON:0004237;5.98e-09;10!UBERON:0004695;5.98e-09;10!UBERON:0002111;5.98e-09;10!UBERON:0004178;5.98e-09;10!UBERON:0000489;2.93e-08;29!UBERON:0004821;2.94e-08;3!UBERON:0007499;2.94e-08;3!UBERON:0003215;2.94e-08;3!UBERON:0006853;2.94e-08;3!UBERON:0007685;2.94e-08;3!UBERON:0010368;2.94e-08;3!UBERON:0009911;2.94e-08;3!UBERON:0002299;2.94e-08;3!UBERON:0004134;2.94e-08;3!UBERON:0006524;2.94e-08;3!UBERON:0008874;2.94e-08;3!UBERON:0002169;2.94e-08;3!UBERON:0004894;2.94e-08;3!UBERON:0002114;5.06e-08;2!UBERON:0006554;5.91e-08;30!UBERON:0001008;5.91e-08;30!UBERON:0003513;7.91e-08;7!UBERON:0001225;2.33e-07;12!UBERON:0008987;2.33e-07;12!UBERON:0003914;3.16e-07;74!UBERON:0004573;9.36e-07;33!UBERON:0004571;9.36e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.29e-19,10;UBERON:0004211,1.26e-12,15;UBERON:0009773,1.26e-12,15;UBERON:0001231,1.26e-12,15;UBERON:0001285,1.26e-12,15;UBERON:0007684,1.26e-12,15;UBERON:0004208,1.26e-12,15;UBERON:0003914,1.28e-12,117;UBERON:0002456,6.17e-12,2;UBERON:0006555,8.44e-12,16;UBERON:0004819,8.44e-12,16;UBERON:0003567,9.06e-12,2;UBERON:0003838,9.06e-12,2;UBERON:0003586,9.06e-12,2;UBERON:0005169,9.06e-12,2;UBERON:0002321,9.06e-12,2;UBERON:0005215,9.06e-12,2;UBERON:0002303,9.06e-12,2;UBERON:0002319,9.06e-12,2;UBERON:0003834,1.10e-10,5;UBERON:0001533,1.10e-10,5;UBERON:0002113,1.88e-09,26;UBERON:0003918,1.88e-09,26;UBERON:0011143,1.88e-09,26;UBERON:0005095,1.88e-09,26;UBERON:0007687,1.88e-09,26;UBERON:0009569,5.22e-09,112;UBERON:0004237,5.63e-09,10;UBERON:0004695,5.63e-09,10;UBERON:0002111,5.63e-09,10;UBERON:0004178,5.63e-09,10;UBERON:0004821,2.20e-08,3;UBERON:0003215,2.20e-08,3;UBERON:0010368,2.20e-08,3;UBERON:0009911,2.20e-08,3;UBERON:0002299,2.20e-08,3;UBERON:0006524,2.20e-08,3;UBERON:0008874,2.20e-08,3;UBERON:0002169,2.20e-08,3;UBERON:0004894,2.20e-08,3;UBERON:0006853,2.74e-08,3;UBERON:0007685,2.74e-08,3;UBERON:0004134,2.74e-08,3;UBERON:0002114,7.23e-08,2;UBERON:0000025,7.62e-08,192;UBERON:0000489,8.79e-08,31;UBERON:0003513,9.32e-08,7;UBERON:0002100,1.64e-07,199;UBERON:0001225,2.00e-07,12;UBERON:0008987,2.00e-07,12;UBERON:0004573,2.42e-07,33;UBERON:0004571,2.42e-07,33;UBERON:0002417,3.47e-07,60;UBERON:0000916,3.47e-07,60;UBERON:0003104,3.74e-07,160;UBERON:0009142,3.74e-07,160 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.893922188854576,0,0,0,0,2.45733936501509,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,1.10808952269109,0.816002764977012,1.56727360739044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0.301439377059586,3.48613383440118,2.59929777073348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.640695746278505,1.02341449813341,0.482561763430822,1.48418066444991,0,0,0.164254312027618,1.03850885836724,0,0,0,0,0,0,0,0,0.924184045252977,2.35304930753057,0,1.68882606228601,0,0,0.863663664408557,0,1.62567862526312,1.50506932156456,0.254876273045038,1.66215201785745,2.0148727924996,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,1.85938219718914,0.94443704049192,2.0911118104818,0,0,2.60979897622522,0,0.143124886741991,0,0,0.38126038784765,0.767693373934002,0,0.636406495851874,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,1.21856744815642,3.16950440270266,0.136499911407986,0.282810863907425,0,12.6814029015609,0,0,0.578775534266688,1.9676842561399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0.0801588202515337,0,0,0,2.1761953271524,0,0,0.372757606696298,0,0,0,0,2.88950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,5.28202867534807,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24349760466224,0.147855149989634,0.159296767163702,0,0.310525913752519,0,0.53168342911599,0,3.75644022493046,0.380805212168795,0,0,1.28892668450986,0,0,0,0,0,0,0,0,0,0,1.389134845943,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0,0,0,0,0,0,1.72742072974897,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,4.84983668596732,3.7514978221865,0,0,0.426467963801962,0.476128862927481,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:27157924..27157950,- | |||
}} |
Latest revision as of 09:01, 31 July 2015
Short description: | p@chr7:27157924..27157950, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:27157924..27157950, - |
Coexpression cluster: | C4678_Smooth_Mesothelial_glioma_mesenchymal_Renal_liposarcoma_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.29e-19 | 10 |
nephron tubule epithelial cell | 3.29e-19 | 10 |
kidney cell | 6.28e-15 | 17 |
kidney epithelial cell | 6.28e-15 | 17 |
epithelial cell of nephron | 1.26e-12 | 15 |
smooth muscle cell of the internal thoracic artery | 6.17e-12 | 2 |
mesangial cell | 9.06e-12 | 2 |
kidney interstitial cell | 9.06e-12 | 2 |
juxtaglomerular complex cell | 9.06e-12 | 2 |
renal interstitial pericyte | 9.06e-12 | 2 |
extraglomerular mesangial cell | 9.06e-12 | 2 |
smooth muscle cell of the subclavian artery | 1.10e-10 | 5 |
aortic smooth muscle cell | 5.63e-09 | 10 |
pneumocyte | 2.20e-08 | 3 |
brush border epithelial cell | 2.74e-08 | 3 |
kidney cortex tubule cell | 2.74e-08 | 3 |
epithelial cell of proximal tubule | 2.74e-08 | 3 |
hepatic stellate cell | 5.85e-08 | 3 |
astrocyte of the cerebellum | 5.85e-08 | 3 |
vascular associated smooth muscle cell | 1.34e-07 | 32 |
kidney cortical cell | 2.00e-07 | 12 |
renal cortical epithelial cell | 2.00e-07 | 12 |
smooth muscle cell | 4.88e-07 | 43 |
smooth muscle myoblast | 4.88e-07 | 43 |