UBERON:0002114
From FANTOM5_SSTAR
| Name: | duodenum | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one)." [ISBN:0815318960, Wikipedia:Duodenum] | ||
| Xrefs: |
| ||
| Synonyms: |
"proximal intestine" RELATED [BTO:0000365] "upper intestine" RELATED [BTO:0000365] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_7206-MA_0000338-MIAA_0000044-XAO_0000236 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004921(subdivision of digestive tract) |
|---|---|
| part_of: | UBERON:0002108(small intestine) |
Children
| derives from: | FF:0010063 (human duodenum - fetal sample) |
|---|---|
| develops from: | UBERON:0003922 (pancreatic epithelial bud) |
| part of: | UBERON:0004914 (duodenal papilla),FF:0010063 (human duodenum - fetal sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10063-101H9 (temporal lobe, fetal, donor1)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002114 (duodenum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:49545691..49545692,+#_75c62016a3c8f3a32af131955696dd28 | p@chr19:49545691..49545692, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:98807901..98807908,-#_75c62016a3c8f3a32af131955696dd28 | p@chr7:98807901..98807908, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:99779265..99779276,+#_75c62016a3c8f3a32af131955696dd28 | p15@STAG3 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:20093569..20093572,+#_75c62016a3c8f3a32af131955696dd28 | p@chr15:20093569..20093572, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:20093569..20093572,+#_75c62016a3c8f3a32af131955696dd28 | p@chr15:20093569..20093572, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:98796685..98796688,-#_75c62016a3c8f3a32af131955696dd28 | p@chr7:98796685..98796688, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:15923954..15923958,-#_75c62016a3c8f3a32af131955696dd28 | p@chr19:15923954..15923958, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:49545691..49545692,+#_75c62016a3c8f3a32af131955696dd28 | p@chr19:49545691..49545692, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:98807901..98807908,-#_75c62016a3c8f3a32af131955696dd28 | p@chr7:98807901..98807908, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:99779265..99779276,+#_75c62016a3c8f3a32af131955696dd28 | p15@STAG3 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:98796685..98796688,-#_75c62016a3c8f3a32af131955696dd28 | p@chr7:98796685..98796688, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:15923954..15923958,-#_75c62016a3c8f3a32af131955696dd28 | p@chr19:15923954..15923958, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_7908796ddf21d6f42395ac3b8938756b | p@chr3:139035972..139036016, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chrX:14748928..14748935,+#_7908796ddf21d6f42395ac3b8938756b | p@chrX:14748928..14748935, + |
| 4.27e-34 | FFCP PHASE1:Hg19::chr7:98595103..98595105,-#_7908796ddf21d6f42395ac3b8938756b | p@chr7:98595103..98595105, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr19:49545646..49545652,+#_7908796ddf21d6f42395ac3b8938756b | p@chr19:49545646..49545652, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_7908796ddf21d6f42395ac3b8938756b | p@chr3:139035972..139036016, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chrX:14748928..14748935,+#_7908796ddf21d6f42395ac3b8938756b | p@chrX:14748928..14748935, + |
| 4.27e-34 | FFCP PHASE2:Hg19::chr7:98595103..98595105,-#_7908796ddf21d6f42395ac3b8938756b | p@chr7:98595103..98595105, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr19:49545646..49545652,+#_7908796ddf21d6f42395ac3b8938756b | p@chr19:49545646..49545652, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr2:133408105..133408109,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr2:133408105..133408109, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr3:148545430..148545465,+#_00a07033bab602d3d78334f8a1f069c9 | p8@CPB1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr16:67965041..67965045,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:67965041..67965045, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr16:20322541..20322560,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20322541..20322560, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr22:30653778..30653783,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr22:30653778..30653783, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:118315554..118315565,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118315554..118315565, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr5:40415240..40415245,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr5:40415240..40415245, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr16:20322541..20322560,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20322541..20322560, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr7:75910322..75910332,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr7:75910322..75910332, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:118307937..118307947,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118307937..118307947, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:22307532..22307539,+#_00a07033bab602d3d78334f8a1f069c9 | p10@CELA3B |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:220292419..220292423,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr1:220292419..220292423, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:124594497..124594500,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:124594497..124594500, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr3:148552307..148552332,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr3:148552307..148552332, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr2:174136708..174136746,-#_00a07033bab602d3d78334f8a1f069c9 | p2@MLK7-AS1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr16:20329594..20329605,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20329594..20329605, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr7:130022025..130022028,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr7:130022025..130022028, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr20:8630056..8630060,+#_00a07033bab602d3d78334f8a1f069c9 | p6@PLCB1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr16:20321376..20321386,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20321376..20321386, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr3:148558735..148558742,+#_00a07033bab602d3d78334f8a1f069c9 | p3@BC015104 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr16:20329594..20329605,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20329594..20329605, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr2:40184895..40184905,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr2:40184895..40184905, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:118314765..118314775,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118314765..118314775, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:118307916..118307927,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118307916..118307927, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr16:20321376..20321386,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20321376..20321386, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr13:70035762..70035773,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr13:70035762..70035773, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr7:98870790..98870795,+#_00a07033bab602d3d78334f8a1f069c9 | p7@MYH16 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr11:8290633..8290665,-#_00a07033bab602d3d78334f8a1f069c9 | p11@LMO1 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:26505179..26505186,+#_00a07033bab602d3d78334f8a1f069c9 | p13@GAD2 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr2:50320593..50320596,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr2:50320593..50320596, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr13:70035762..70035773,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr13:70035762..70035773, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:39290407..39290416,-#_00a07033bab602d3d78334f8a1f069c9 | p5@KCNK16 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr3:148545533..148545534,+#_00a07033bab602d3d78334f8a1f069c9 | p10@CPB1 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr2:139535391..139535401,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr2:139535391..139535401, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr17:26818577..26818591,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr17:26818577..26818591, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:118315582..118315593,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118315582..118315593, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chrX:11408506..11408511,-#_00a07033bab602d3d78334f8a1f069c9 | p@chrX:11408506..11408511, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr16:20319465..20319474,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20319465..20319474, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:118314717..118314725,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118314717..118314725, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:15653436..15653448,+#_00a07033bab602d3d78334f8a1f069c9 | p12@FHAD1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr4:174456011..174456013,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr4:174456011..174456013, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr16:20319465..20319474,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20319465..20319474, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr7:142480038..142480045,+#_00a07033bab602d3d78334f8a1f069c9 | p2@TRY6 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr20:61339609..61339610,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr20:61339609..61339610, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr14:24162221..24162248,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr14:24162221..24162248, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr3:148552336..148552342,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr3:148552336..148552342, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:22310762..22310769,+#_00a07033bab602d3d78334f8a1f069c9 | p9@CELA3B |
| 5.96e-34 | FFCP PHASE1:Hg19::chr16:20329655..20329664,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20329655..20329664, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr3:148563293..148563303,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr3:148563293..148563303, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr14:24162221..24162248,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr14:24162221..24162248, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:118315554..118315565,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118315554..118315565, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr7:98870980..98870981,+#_00a07033bab602d3d78334f8a1f069c9 | p8@MYH16 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr5:112214095..112214109,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr5:112214095..112214109, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr16:20329655..20329664,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr16:20329655..20329664, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr11:69867159..69867175,-#_00a07033bab602d3d78334f8a1f069c9 | p3@ENST00000528507 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr7:142479959..142479966,+#_00a07033bab602d3d78334f8a1f069c9 | p4@TRY6 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:118314966..118314971,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118314966..118314971, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:118307937..118307947,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118307937..118307947, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr8:107669952..107669963,+#_00a07033bab602d3d78334f8a1f069c9 | p34@OXR1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr3:148558688..148558695,+#_00a07033bab602d3d78334f8a1f069c9 | p5@BC015104 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:124594497..124594500,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:124594497..124594500, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr7:150037547..150037552,-#_00a07033bab602d3d78334f8a1f069c9 | p10@RARRES2 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr7:100907782..100907785,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr7:100907782..100907785, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:118314765..118314775,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118314765..118314775, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr2:133408105..133408109,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr2:133408105..133408109, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr11:1023637..1023640,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr11:1023637..1023640, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr3:148545430..148545465,+#_00a07033bab602d3d78334f8a1f069c9 | p8@CPB1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr11:8290633..8290665,-#_00a07033bab602d3d78334f8a1f069c9 | p11@LMO1 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr22:30653778..30653783,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr22:30653778..30653783, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr17:26818577..26818591,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr17:26818577..26818591, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr5:40415240..40415245,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr5:40415240..40415245, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr2:79365549..79365554,-#_00a07033bab602d3d78334f8a1f069c9 | p1@REG1P |
| 5.96e-34 | FFCP PHASE2:Hg19::chr7:75910322..75910332,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr7:75910322..75910332, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:22307532..22307539,+#_00a07033bab602d3d78334f8a1f069c9 | p10@CELA3B |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:118315582..118315593,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118315582..118315593, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:220292419..220292423,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr1:220292419..220292423, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr3:148552307..148552332,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr3:148552307..148552332, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr7:130022025..130022028,-#_00a07033bab602d3d78334f8a1f069c9 | p@chr7:130022025..130022028, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:118307868..118307873,+#_00a07033bab602d3d78334f8a1f069c9 | p@chr10:118307868..118307873, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr20:8630056..8630060,+#_00a07033bab602d3d78334f8a1f069c9 | p6@PLCB1 |
