FFCP PHASE1:Hg19::chr6:31846768..31846780,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80736 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13941 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000229729,ENST00000462671,ENST00000465707_5end | |||
|cluster_id=chr6:31846768..31846780,- | |||
|coexpression_cluster_id=C1339 | |||
|description=CAGE_peak_1_at_SLC44A4_5end | |||
|id=chr6:31846768..31846780,- | |||
|ontology_enrichment_celltype=CL:0002368!2.36e-12!13;CL:1000507!1.01e-10!12;CL:1000494!1.01e-10!12;CL:1000449!3.05e-09!16;CL:0002202!1.46e-08!9;CL:0002632!1.46e-08!9;CL:1000497!6.87e-08!18;CL:0002518!6.87e-08!18;CL:0002076!6.03e-07!43;CL:0000223!8.84e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.06e-12;10!CL:1000494;1.06e-12;10!CL:1000449;3.42e-10;15!CL:0002368;3.76e-10;13!CL:1000497;9.26e-09;17!CL:0002518;9.26e-09;17!CL:0000244;1.39e-07;4!CL:0000731;1.39e-07;4!CL:0000239;2.88e-07;3!CL:1000615;2.88e-07;3!CL:0002306;2.88e-07;3!CL:0002202;3.73e-07;9!CL:0002632;3.73e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.12e-12,10;CL:1000494,1.12e-12,10;CL:1000449,3.57e-10,15;CL:0002368,3.72e-10,13;CL:1000497,9.59e-09,17;CL:0002518,9.59e-09,17;CL:0000244,1.10e-07,4;CL:0000731,1.10e-07,4;CL:0000239,3.01e-07,3;CL:1000615,3.01e-07,3;CL:0002306,3.01e-07,3;CL:0002202,3.39e-07,9;CL:0002632,3.39e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006595;7.60e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.33e-22!169;UBERON:0000925!4.33e-22!169;UBERON:0006595!4.33e-22!169;UBERON:0004921!9.32e-20!129;UBERON:0004185!9.32e-20!129;UBERON:0000466!2.83e-18!126;UBERON:0001007!1.42e-17!155;UBERON:0001555!1.42e-17!155;UBERON:0007026!1.42e-17!155;UBERON:0007023!1.07e-15!115;UBERON:0000077!2.46e-15!130;UBERON:0000464!3.02e-15!104;UBERON:0005177!3.77e-15!107;UBERON:0001008!6.97e-15!45;UBERON:0000058!1.22e-14!26;UBERON:0006554!5.41e-14!44;UBERON:0009569!1.04e-12!113;UBERON:0005911!1.11e-12!82;UBERON:0003064!5.96e-12!37;UBERON:0004876!8.96e-12!20;UBERON:0000080!1.79e-11!18;UBERON:0002120!1.79e-11!18;UBERON:0004875!1.79e-11!18;UBERON:0005721!1.79e-11!18;UBERON:0005754!1.79e-11!18;UBERON:0007297!1.79e-11!18;UBERON:0001041!9.49e-11!98;UBERON:0009773!1.01e-10!12;UBERON:0001231!1.01e-10!12;UBERON:0004810!1.01e-10!12;UBERON:0003887!1.38e-10!21;UBERON:0006555!2.53e-10!17;UBERON:0005103!2.53e-10!17;UBERON:0000083!2.53e-10!17;UBERON:0009201!2.53e-10!17;UBERON:0004819!2.53e-10!17;UBERON:0006553!2.53e-10!17;UBERON:0003074!2.53e-10!17;UBERON:0003060!2.53e-10!17;UBERON:0005172!6.02e-10!55;UBERON:0005173!6.02e-10!55;UBERON:0000489!2.35e-09!32;UBERON:0000065!2.43e-09!53;UBERON:0004211!3.05e-09!16;UBERON:0001285!3.05e-09!16;UBERON:0007684!3.05e-09!16;UBERON:0003220!3.05e-09!16;UBERON:0004208!3.05e-09!16;UBERON:0002113!3.53e-09!27;UBERON:0003918!3.53e-09!27;UBERON:0005095!3.53e-09!27;UBERON:0007687!3.53e-09!27;UBERON:0000481!5.56e-09!347;UBERON:0003104!6.20e-09!238;UBERON:0009142!6.20e-09!238;UBERON:0005178!1.12e-08!34;UBERON:0002224!1.12e-08!34;UBERON:0000922!1.91e-08!612;UBERON:0007196!2.71e-08!14;UBERON:0001558!2.71e-08!14;UBERON:0005181!2.73e-08!35;UBERON:0002417!2.86e-08!61;UBERON:0000916!2.86e-08!61;UBERON:0002553!4.94e-08!70;UBERON:0001004!5.88e-08!72;UBERON:0000062!8.07e-08!511;UBERON:0000468!1.37e-07!659;UBERON:0002294!2.09e-07!7;UBERON:0001173!2.09e-07!7;UBERON:0004912!2.09e-07!7;UBERON:0004111!2.72e-07!241;UBERON:0003886!3.90e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;6.05e-14;30!UBERON:0001008;6.05e-14;30!UBERON:0005409;8.64e-14;22!UBERON:0000160;3.45e-13;17!UBERON:0004921;5.04e-13;33!UBERON:0004211;1.06e-12;10!UBERON:0009773;1.06e-12;10!UBERON:0001231;1.06e-12;10!UBERON:0004810;1.06e-12;10!UBERON:0006555;3.42e-10;15!UBERON:0004819;3.42e-10;15!UBERON:0001285;3.42e-10;15!UBERON:0007684;3.42e-10;15!UBERON:0000058;1.09e-09;10!UBERON:0002113;9.16e-09;24!UBERON:0011143;9.16e-09;24!UBERON:0000489;3.38e-08;29!UBERON:0002108;7.35e-08;4!UBERON:0002294;1.49e-07;7!UBERON:0001173;1.49e-07;7!UBERON:0007196;2.45e-07;15!UBERON:0001558;2.45e-07;15!UBERON:0006853;2.88e-07;3!UBERON:0007685;2.88e-07;3!UBERON:0004134;2.88e-07;3!UBERON:0006947;3.27e-07;3!UBERON:0004054;3.27e-07;3!UBERON:0000059;4.78e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.48e-20,160;UBERON:0000925,7.48e-20,160;UBERON:0006595,7.48e-20,160;UBERON:0004921,7.12e-19,118;UBERON:0001008,5.96e-18,48;UBERON:0006554,9.00e-17,47;UBERON:0001007,3.44e-15,145;UBERON:0001555,3.44e-15,145;UBERON:0007026,3.44e-15,145;UBERON:0000160,3.36e-13,17;UBERON:0004810,1.12e-12,10;UBERON:0005177,3.15e-12,101;UBERON:0005409,8.48e-12,25;UBERON:0006555,1.21e-11,16;UBERON:0004819,1.21e-11,16;UBERON:0002113,3.07e-11,26;UBERON:0003918,3.07e-11,26;UBERON:0011143,3.07e-11,26;UBERON:0005095,3.07e-11,26;UBERON:0007687,3.07e-11,26;UBERON:0007023,5.22e-11,114;UBERON:0000489,1.92e-10,31;UBERON:0004211,3.57e-10,15;UBERON:0009773,3.57e-10,15;UBERON:0001231,3.57e-10,15;UBERON:0001285,3.57e-10,15;UBERON:0007684,3.57e-10,15;UBERON:0004208,3.57e-10,15;UBERON:0009569,2.68e-09,112;UBERON:0001041,1.30e-08,87;UBERON:0005911,2.92e-08,82;UBERON:0005172,6.77e-08,54;UBERON:0005173,6.77e-08,54;UBERON:0002108,7.42e-08,4;UBERON:0000065,1.88e-07,54;UBERON:0007196,2.26e-07,15;UBERON:0001558,2.26e-07,15;UBERON:0006853,3.01e-07,3;UBERON:0007685,3.01e-07,3;UBERON:0004134,3.01e-07,3;UBERON:0006947,3.27e-07,3;UBERON:0004054,3.27e-07,3;UBERON:0003103,3.30e-07,68;UBERON:0000059,4.68e-07,11;UBERON:0001046,5.32e-07,19;UBERON:0002100,5.73e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,22.3617882216373,65.5933097894082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7197314015334,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.662648841607426,1.51052125730374,0.725627385107593,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,3.81264159483652,0,0,0,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,1.93370076765382,0,0,0,41.9615640003893,18.8687575905816,6.27479815341484,10.2297457257282,6.01644284689391,0,0,0,0,0.270946437543853,0.501689773854853,29.8205239462695,81.445448875015,3.1342465661105,0,0,0,0,0,10.6132241997154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,1.34533047155574,1.27612712494584,4.75441570021085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,2.68120910214315,3.26672954583968,9.13194867534758,2.58303223602738,1.68471475667626,3.99087138183008,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.9973458759483,0,0,0,0,0,0,0,0,0,0,0,0,26.4999824373923,40.8900194986099,2.26739473068848,0,0,0,6.20091622916555,13.0685457513195,0,11.4426350538843,0,0,0,0,0,0,0.874599999961957,5.79999660347835,0,9.66163871112512,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,8.15672740140249,0,0,0.179515288819544,0,0.638002319463839,1.19076871422421,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,165.213480559032,136.755394722162,119.761908406991,0,0,0,0.337005664903385,0,0,0,0,0,22.0967265595659,54.4458222218988,0,0.063186579628488,0,0,0,0,0,0,4.55375273647668,0,0,0,0.957651272384428,9.78469342155369,0,0,0,0,0.484945082442097,0,4.97157629717171,0,0,0,3.91102765469606,0.480952921509202,128.925608822569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,1.16495949527454,0.315132729228895,0.247247575143499,0.202210631562555,0,0,0,0,0.482259445395058,0.275078873194468,0,1.799791132412,4.6428117273477,0.0607495566580247,0,55.9520521824307,45.1109457960984,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0.258565912723101,0,0,22.5540807141335,36.0941454478808,42.4451623769098,21.9546699334014,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11312123358627,0,0,0,0,0,1.95831310807222,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,11.7328112224841,0,14.0672522021957,0,0,21.7348446739057,0,0,0,0,0,2.19303106742873,11.9090682813431,0,0.255524855279191,0,0,6.06965604236632,10.4724608021597,1.50794029276486,0,0,0,0,0,1.77970243027311,48.1947590102156,0,6.44625975621715,35.6131900998703,0,0,0.0714765441766563,0,0,0,0,0,0,0,27.964778323318,0,0,19.4758043087827,0,0,0,0.223710863595585,7.16496705391274,110.457640033936,0,0,0,2.91426595835484,0,0,0.118920090777569,0,0,0,198.723457127957,89.1723006856146,0,1.96118657403124,0,0,0,0,0,0,0.0644578879735772,0,4.6424024037471,0,0,56.9662382832283,4.58729283404541,0,0,0,0,52.3736572110246,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,1.81868875723775,0,0,0,18.5513564253853,17.378703496853,0.322944549180031,0.744896571550295,0,0.700118741059814,0,2.17716747896961,2.39563310759697,9.42928742204225,151.40557558394,19.6269610362148,0.569822880276821,0,0,0,2.34640942403454,5.25638209986326,2.44137706989443,4.66029741929859,0.201273793591026,0 | |||
|short_description=p1@SLC44A4 | |||
}} |
Latest revision as of 00:48, 18 September 2015
Short description: | p1@SLC44A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC44A4_5end |
Coexpression cluster: | C1339_small_colon_signet_trachea_gall_adenocarcinoma_Renal |
Association with transcript: | 0bp_to_ENST00000229729, ENST00000462671, ENST00000465707_5end |
EntrezGene: | SLC44A4 |
HGNC: | 13941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.12e-12 | 10 |
nephron tubule epithelial cell | 1.12e-12 | 10 |
epithelial cell of nephron | 3.57e-10 | 15 |
respiratory epithelial cell | 3.72e-10 | 13 |
kidney cell | 9.59e-09 | 17 |
kidney epithelial cell | 9.59e-09 | 17 |
transitional epithelial cell | 1.10e-07 | 4 |
urothelial cell | 1.10e-07 | 4 |
brush border epithelial cell | 3.01e-07 | 3 |
kidney cortex tubule cell | 3.01e-07 | 3 |
epithelial cell of proximal tubule | 3.01e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.39e-07 | 9 |
epithelial cell of lower respiratory tract | 3.39e-07 | 9 |