FFCP PHASE1:Mm9::chr13:24508747..24508820,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12763|HGNC=|MCL_coexpression_id=33|UniProt=Q3UM08|association_with_transcript=0bp_to_ENSMUST00000144621,uc007pvw.1,uc007pvx.2_5end|description=CAGE_peak_1_at_Cmah_5end|id=chr13:24508747..24508820,+|ontology_enrichment_celltype=CL:0000542!6.13e-09!13;CL:0000051!6.13e-09!13;CL:0000838!1.27e-08!12;CL:0000791!3.50e-08!9;CL:0000789!3.50e-08!9;CL:0002420!3.50e-08!9;CL:0002419!3.50e-08!9;CL:0000790!3.50e-08!9;CL:0000084!5.90e-08!11;CL:0000827!5.90e-08!11;CL:0000624!2.32e-07!8;CL:0000414!3.73e-07!11|ontology_enrichment_celltype_v019_2=CL:0000791,2.14e-13,9;CL:0000789,2.14e-13,9;CL:0002420,2.14e-13,9;CL:0002419,2.14e-13,9;CL:0000790,2.14e-13,9;CL:0000542,2.94e-12,13;CL:0000051,2.94e-12,13;CL:0000624,6.20e-12,8;CL:0002031,8.63e-12,25;CL:0000838,1.17e-11,12;CL:0000084,1.69e-10,11;CL:0000827,1.69e-10,11;CL:0000988,3.89e-09,32;CL:0002032,3.89e-09,32;CL:0000037,3.89e-09,32;CL:0000837,3.89e-09,32;CL:0000893,4.03e-09,6;CL:0002489,4.03e-09,6;CL:0000898,4.03e-09,6;CL:0000809,4.03e-09,6;CL:0000810,4.03e-09,6;CL:0000895,4.03e-09,6;CL:0000808,4.03e-09,6;CL:0000894,4.03e-09,6;CL:0000806,4.03e-09,6;CL:0000807,4.03e-09,6;CL:0000805,4.03e-09,6;CL:0002425,4.03e-09,6;CL:0002436,4.03e-09,6;CL:0002427,4.03e-09,6;CL:0002428,4.03e-09,6;CL:0002429,4.03e-09,6;CL:0002433,4.03e-09,6;CL:0002431,4.03e-09,6;CL:0002432,4.03e-09,6;CL:0000738,1.22e-08,17;CL:0002087,1.22e-08,17;CL:0000553,3.72e-08,6;CL:0000556,3.72e-08,6;CL:0002320,5.93e-08,46;CL:0000134,5.93e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!4.32e-15!51;UBERON:0002405!1.31e-14!70;UBERON:0004177!5.29e-14!29;UBERON:0001041!1.59e-12!92;UBERON:0000077!2.07e-12!97;UBERON:0002193!3.19e-12!48;UBERON:0001007!1.88e-11!128;UBERON:0001555!1.88e-11!128;UBERON:0007026!1.88e-11!128;UBERON:0003408!1.89e-11!24;UBERON:0004119!2.09e-11!130;UBERON:0000925!2.09e-11!130;UBERON:0006595!2.09e-11!130;UBERON:0006562!6.21e-11!24;UBERON:0001557!6.21e-11!24;UBERON:0001042!6.21e-11!24;UBERON:0008814!6.21e-11!24;UBERON:0009145!6.21e-11!24;UBERON:0002370!6.30e-11!23;UBERON:0000974!6.30e-11!23;UBERON:0004807!6.30e-11!23;UBERON:0005058!6.30e-11!23;UBERON:0003351!6.30e-11!23;UBERON:0009113!6.30e-11!23;UBERON:0003295!6.30e-11!23;UBERON:0009722!6.30e-11!23;UBERON:0005562!6.30e-11!23;UBERON:0007690!6.30e-11!23;UBERON:0001004!1.06e-10!42;UBERON:0004921!1.42e-10!126;UBERON:0004185!1.42e-10!126;UBERON:0002390!1.64e-10!45;UBERON:0003061!1.64e-10!45;UBERON:0000065!3.21e-10!41;UBERON:0005911!6.50e-10!69;UBERON:0002530!2.38e-09!65;UBERON:0000072!1.23e-08!27;UBERON:0002368!3.00e-08!60;UBERON:0003929!6.69e-08!55;UBERON:0003104!1.96e-07!131;UBERON:0009142!1.96e-07!131;UBERON:0000949!3.17e-07!72;UBERON:0001048!4.77e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.08e-23,48;UBERON:0002405,1.08e-23,48;UBERON:0004177,4.24e-22,29;UBERON:0005057,4.24e-22,29;UBERON:0002390,1.83e-20,45;UBERON:0003061,1.83e-20,45;UBERON:0003408,1.47e-18,24;UBERON:0000077,1.71e-18,35;UBERON:0002370,1.24e-17,23;UBERON:0000974,1.24e-17,23;UBERON:0004807,1.24e-17,23;UBERON:0005058,1.24e-17,23;UBERON:0003351,1.24e-17,23;UBERON:0009113,1.24e-17,23;UBERON:0003295,1.24e-17,23;UBERON:0009722,1.24e-17,23;UBERON:0005562,1.24e-17,23;UBERON:0007690,1.24e-17,23;UBERON:0001004,7.49e-17,42;UBERON:0006562,1.19e-16,24;UBERON:0001557,1.19e-16,24;UBERON:0001042,1.19e-16,24;UBERON:0008814,1.19e-16,24;UBERON:0009145,1.19e-16,24;UBERON:0001041,4.97e-16,80;UBERON:0000065,5.23e-16,41;UBERON:0000072,3.75e-14,27;UBERON:0001007,2.66e-13,116;UBERON:0001555,2.66e-13,116;UBERON:0007026,2.66e-13,116;UBERON:0005911,5.45e-13,69;UBERON:0004119,7.38e-13,118;UBERON:0000925,7.38e-13,118;UBERON:0006595,7.38e-13,118;UBERON:0004921,5.51e-12,114;UBERON:0003081,1.77e-10,87;UBERON:0007811,2.27e-10,36;UBERON:0003929,3.00e-10,55;UBERON:0002530,4.24e-10,65;UBERON:0002368,8.64e-09,60;UBERON:0001048,1.31e-08,134;UBERON:0000949,3.73e-08,72;UBERON:0002384,5.93e-08,46;UBERON:0000153,8.83e-08,43;UBERON:0000490,2.35e-07,66|phase1_expression=0,0,0,0,0,0,0,72.5673077741659,60.398361803065,55.4732927383125,5.99262888789267,3.58974715479014,181.301572997147,137.861974614759,5.99597571268193,8.70643649776252,2.09868563438444,38.6441152563841,48.4013950628258,27.1609377150739,1.53077922271926,0.0992909512008853,0.783599367416806,5.59973479776923,4.81759490241057,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5096517571223,113.15649415377,180.818463938646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,1.44932244350839,0.860423876981386,0.679971333707751,1.07940638327563,3.24888208723835,1.79210754838934,2.52799956237153,0,0,0.35333957451034,0,0,0,0,0,0,0,3.4255163915718,107.459221713576,0.742210695324124,0,0,0,0,0.117588707135705,0.125666591329675,0,2.31358971071859,2.65383165584962,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0.255715457330331,0,0,0,2.23932547098167,0,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0.985004784474571,0.324275238183423,0.146199987425332,1.09775057645525,1.07365135008297,0,0,0,0,1.06644125267617,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,1.25667604400135,0.397912944082302,1.36474860983384,1.79763881730844,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0.202860121388503,0,0.763877555344259,0.575392274901621,1.29708181420028,0,8.62609239164127,2.23284568601102,0.312037673114561,0,1.25578189465339,0.482443521363367,9.23765950833023,0,0,0,0,0.502518772325447,0.238043640886014,0.195133647857799,3.15270288212382,2.21464689648775,3.82691444777969,8.1931657357869,9.49767400262426,6.07526046042349,0,0,2.95058563811422,3.86311444826625,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0,0.307435147943927,0,0.363533729477506,1.06949213515416,3.16036757935816,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0.469343416127421,0,0.441056796109924,0.65954501176592,0.322928853391811,0.120625849856312,0.119372344003136,0,2.33184669303881,0.18542530201051,12.6444451790411,0.206386867963223,2.77791791054568,9.98352822124862,15.0363650493128,11.8964650067392,0.339956859987711,0.419854356970974,0.690999869022119,0,0.316335993581135,0,0,0,0,0,0.41326727862668,0.26175594198403,0.648074866458964,3.10669656543463,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,43.9255457673168,0.202725215290164,0.410843828659309,2.98817892848929,13.4270021750611,33.3784676032525,35.0970712598309,37.5131399023426,40.4875464292072,51.0585604588499,42.8511286831572,42.2967202410525,37.7150419230091,81.1125701140088,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.581385666529314,0.470546902076653,0.507687647350059,0.182927972872773,0.789209134313529,0.271608227691724,0,0.474540072496697,0.492522411877817,0,0,0.192906610981141,0,0.701794825336225,1.07435527024149,0.57386499620653,1.32354851471709,0.463735671240843|short_description=p1@Cmah}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12763 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UM08 | |||
|association_with_transcript=0bp_to_ENSMUST00000144621,uc007pvw.1,uc007pvx.2_5end | |||
|cluster_id=chr13:24508747..24508820,+ | |||
|description=CAGE_peak_1_at_Cmah_5end | |||
|id=chr13:24508747..24508820,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.13e-09!13;CL:0000051!6.13e-09!13;CL:0000838!1.27e-08!12;CL:0000791!3.50e-08!9;CL:0000789!3.50e-08!9;CL:0002420!3.50e-08!9;CL:0002419!3.50e-08!9;CL:0000790!3.50e-08!9;CL:0000084!5.90e-08!11;CL:0000827!5.90e-08!11;CL:0000624!2.32e-07!8;CL:0000414!3.73e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.14e-13,9;CL:0000789,2.14e-13,9;CL:0002420,2.14e-13,9;CL:0002419,2.14e-13,9;CL:0000790,2.14e-13,9;CL:0000542,2.94e-12,13;CL:0000051,2.94e-12,13;CL:0000624,6.20e-12,8;CL:0002031,8.63e-12,25;CL:0000838,1.17e-11,12;CL:0000084,1.69e-10,11;CL:0000827,1.69e-10,11;CL:0000988,3.89e-09,32;CL:0002032,3.89e-09,32;CL:0000037,3.89e-09,32;CL:0000837,3.89e-09,32;CL:0000893,4.03e-09,6;CL:0002489,4.03e-09,6;CL:0000898,4.03e-09,6;CL:0000809,4.03e-09,6;CL:0000810,4.03e-09,6;CL:0000895,4.03e-09,6;CL:0000808,4.03e-09,6;CL:0000894,4.03e-09,6;CL:0000806,4.03e-09,6;CL:0000807,4.03e-09,6;CL:0000805,4.03e-09,6;CL:0002425,4.03e-09,6;CL:0002436,4.03e-09,6;CL:0002427,4.03e-09,6;CL:0002428,4.03e-09,6;CL:0002429,4.03e-09,6;CL:0002433,4.03e-09,6;CL:0002431,4.03e-09,6;CL:0002432,4.03e-09,6;CL:0000738,1.22e-08,17;CL:0002087,1.22e-08,17;CL:0000553,3.72e-08,6;CL:0000556,3.72e-08,6;CL:0002320,5.93e-08,46;CL:0000134,5.93e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!4.32e-15!51;UBERON:0002405!1.31e-14!70;UBERON:0004177!5.29e-14!29;UBERON:0001041!1.59e-12!92;UBERON:0000077!2.07e-12!97;UBERON:0002193!3.19e-12!48;UBERON:0001007!1.88e-11!128;UBERON:0001555!1.88e-11!128;UBERON:0007026!1.88e-11!128;UBERON:0003408!1.89e-11!24;UBERON:0004119!2.09e-11!130;UBERON:0000925!2.09e-11!130;UBERON:0006595!2.09e-11!130;UBERON:0006562!6.21e-11!24;UBERON:0001557!6.21e-11!24;UBERON:0001042!6.21e-11!24;UBERON:0008814!6.21e-11!24;UBERON:0009145!6.21e-11!24;UBERON:0002370!6.30e-11!23;UBERON:0000974!6.30e-11!23;UBERON:0004807!6.30e-11!23;UBERON:0005058!6.30e-11!23;UBERON:0003351!6.30e-11!23;UBERON:0009113!6.30e-11!23;UBERON:0003295!6.30e-11!23;UBERON:0009722!6.30e-11!23;UBERON:0005562!6.30e-11!23;UBERON:0007690!6.30e-11!23;UBERON:0001004!1.06e-10!42;UBERON:0004921!1.42e-10!126;UBERON:0004185!1.42e-10!126;UBERON:0002390!1.64e-10!45;UBERON:0003061!1.64e-10!45;UBERON:0000065!3.21e-10!41;UBERON:0005911!6.50e-10!69;UBERON:0002530!2.38e-09!65;UBERON:0000072!1.23e-08!27;UBERON:0002368!3.00e-08!60;UBERON:0003929!6.69e-08!55;UBERON:0003104!1.96e-07!131;UBERON:0009142!1.96e-07!131;UBERON:0000949!3.17e-07!72;UBERON:0001048!4.77e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.08e-23,48;UBERON:0002405,1.08e-23,48;UBERON:0004177,4.24e-22,29;UBERON:0005057,4.24e-22,29;UBERON:0002390,1.83e-20,45;UBERON:0003061,1.83e-20,45;UBERON:0003408,1.47e-18,24;UBERON:0000077,1.71e-18,35;UBERON:0002370,1.24e-17,23;UBERON:0000974,1.24e-17,23;UBERON:0004807,1.24e-17,23;UBERON:0005058,1.24e-17,23;UBERON:0003351,1.24e-17,23;UBERON:0009113,1.24e-17,23;UBERON:0003295,1.24e-17,23;UBERON:0009722,1.24e-17,23;UBERON:0005562,1.24e-17,23;UBERON:0007690,1.24e-17,23;UBERON:0001004,7.49e-17,42;UBERON:0006562,1.19e-16,24;UBERON:0001557,1.19e-16,24;UBERON:0001042,1.19e-16,24;UBERON:0008814,1.19e-16,24;UBERON:0009145,1.19e-16,24;UBERON:0001041,4.97e-16,80;UBERON:0000065,5.23e-16,41;UBERON:0000072,3.75e-14,27;UBERON:0001007,2.66e-13,116;UBERON:0001555,2.66e-13,116;UBERON:0007026,2.66e-13,116;UBERON:0005911,5.45e-13,69;UBERON:0004119,7.38e-13,118;UBERON:0000925,7.38e-13,118;UBERON:0006595,7.38e-13,118;UBERON:0004921,5.51e-12,114;UBERON:0003081,1.77e-10,87;UBERON:0007811,2.27e-10,36;UBERON:0003929,3.00e-10,55;UBERON:0002530,4.24e-10,65;UBERON:0002368,8.64e-09,60;UBERON:0001048,1.31e-08,134;UBERON:0000949,3.73e-08,72;UBERON:0002384,5.93e-08,46;UBERON:0000153,8.83e-08,43;UBERON:0000490,2.35e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,72.5673077741659,60.398361803065,55.4732927383125,5.99262888789267,3.58974715479014,181.301572997147,137.861974614759,5.99597571268193,8.70643649776252,2.09868563438444,38.6441152563841,48.4013950628258,27.1609377150739,1.53077922271926,0.0992909512008853,0.783599367416806,5.59973479776923,4.81759490241057,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5096517571223,113.15649415377,180.818463938646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,1.44932244350839,0.860423876981386,0.679971333707751,1.07940638327563,3.24888208723835,1.79210754838934,2.52799956237153,0,0,0.35333957451034,0,0,0,0,0,0,0,3.4255163915718,107.459221713576,0.742210695324124,0,0,0,0,0.117588707135705,0.125666591329675,0,2.31358971071859,2.65383165584962,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0.255715457330331,0,0,0,2.23932547098167,0,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0.985004784474571,0.324275238183423,0.146199987425332,1.09775057645525,1.07365135008297,0,0,0,0,1.06644125267617,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,1.25667604400135,0.397912944082302,1.36474860983384,1.79763881730844,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0.202860121388503,0,0.763877555344259,0.575392274901621,1.29708181420028,0,8.62609239164127,2.23284568601102,0.312037673114561,0,1.25578189465339,0.482443521363367,9.23765950833023,0,0,0,0,0.502518772325447,0.238043640886014,0.195133647857799,3.15270288212382,2.21464689648775,3.82691444777969,8.1931657357869,9.49767400262426,6.07526046042349,0,0,2.95058563811422,3.86311444826625,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0,0.307435147943927,0,0.363533729477506,1.06949213515416,3.16036757935816,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0.469343416127421,0,0.441056796109924,0.65954501176592,0.322928853391811,0.120625849856312,0.119372344003136,0,2.33184669303881,0.18542530201051,12.6444451790411,0.206386867963223,2.77791791054568,9.98352822124862,15.0363650493128,11.8964650067392,0.339956859987711,0.419854356970974,0.690999869022119,0,0.316335993581135,0,0,0,0,0,0.41326727862668,0.26175594198403,0.648074866458964,3.10669656543463,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,43.9255457673168,0.202725215290164,0.410843828659309,2.98817892848929,13.4270021750611,33.3784676032525,35.0970712598309,37.5131399023426,40.4875464292072,51.0585604588499,42.8511286831572,42.2967202410525,37.7150419230091,81.1125701140088,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.581385666529314,0.470546902076653,0.507687647350059,0.182927972872773,0.789209134313529,0.271608227691724,0,0.474540072496697,0.492522411877817,0,0,0.192906610981141,0,0.701794825336225,1.07435527024149,0.57386499620653,1.32354851471709,0.463735671240843 | |||
|short_description=p1@Cmah | |||
}} |
Latest revision as of 07:40, 27 September 2015
Short description: | p1@Cmah |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cmah_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000144621, uc007pvw.1, uc007pvx.2_5end |
EntrezGene: | Cmah |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data