FFCP PHASE1:Hg19::chr2:108602971..108602986,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14025 | |||
|TSSclassifier=strong | |||
|UniProt=Q9GZV3,F5H382 | |||
|association_with_transcript=0bp_to_ENST00000409059,ENST00000540517_5end | |||
|cluster_id=chr2:108602971..108602986,+ | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_1_at_SLC5A7_5end | |||
|id=chr2:108602971..108602986,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;8.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,8.34e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.26e-11;2!UBERON:0006241;4.12e-08;3!UBERON:0003057;4.12e-08;3!UBERON:0006601;6.81e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-51!115;UBERON:0001049!1.27e-21!57;UBERON:0005068!1.27e-21!57;UBERON:0006241!1.27e-21!57;UBERON:0007135!1.27e-21!57;UBERON:0003075!1.87e-18!86;UBERON:0007284!1.87e-18!86;UBERON:0002308!1.05e-17!9;UBERON:0000125!1.05e-17!9;UBERON:0002346!2.97e-17!90;UBERON:0005743!1.03e-16!86;UBERON:0001017!1.69e-16!82;UBERON:0000073!1.54e-15!94;UBERON:0001016!1.54e-15!94;UBERON:0002616!1.84e-15!59;UBERON:0000955!2.14e-13!69;UBERON:0006238!2.14e-13!69;UBERON:0009663!4.92e-13!7;UBERON:0002780!2.12e-12!41;UBERON:0001890!2.12e-12!41;UBERON:0006240!2.12e-12!41;UBERON:0003076!3.70e-12!15;UBERON:0003057!3.70e-12!15;UBERON:0003080!5.24e-12!42;UBERON:0002298!3.64e-11!8;UBERON:0000369!9.01e-11!4;UBERON:0002435!9.01e-11!4;UBERON:0000204!9.01e-11!4;UBERON:0010082!9.01e-11!4;UBERON:0002020!1.90e-10!34;UBERON:0003528!1.90e-10!34;UBERON:0002420!6.27e-10!9;UBERON:0007245!6.27e-10!9;UBERON:0010009!6.27e-10!9;UBERON:0010011!6.27e-10!9;UBERON:0000454!6.27e-10!9;UBERON:0004121!7.84e-10!169;UBERON:0004111!1.21e-09!241;UBERON:0000062!1.50e-09!511;UBERON:0000481!1.86e-09!347;UBERON:0000924!2.15e-09!173;UBERON:0006601!2.15e-09!173;UBERON:0000153!4.47e-09!129;UBERON:0007811!4.47e-09!129;UBERON:0000922!5.39e-09!612;UBERON:0002791!6.49e-09!33;UBERON:0000025!1.04e-08!194;UBERON:0001893!1.43e-08!34;UBERON:0005383!1.48e-08!3;UBERON:0005382!1.48e-08!3;UBERON:0000988!1.84e-08!3;UBERON:0001896!2.03e-08!3;UBERON:0005290!2.03e-08!3;UBERON:0010096!2.03e-08!3;UBERON:0000477!2.18e-08!286;UBERON:0000033!2.54e-08!123;UBERON:0002240!3.80e-08!3;UBERON:0000468!4.63e-08!659;UBERON:0003056!4.84e-08!61;UBERON:0001869!6.41e-08!32;UBERON:0003978!1.32e-07!3;UBERON:0009751!1.32e-07!3;UBERON:0000946!1.32e-07!3;UBERON:0002523!1.32e-07!3;UBERON:0005983!1.32e-07!3;UBERON:0002165!1.32e-07!3;UBERON:0002062!1.32e-07!3;UBERON:0007280!1.32e-07!3;UBERON:0006947!3.71e-07!3;UBERON:0004054!3.71e-07!3;UBERON:0004733!3.86e-07!12;UBERON:0002028!3.86e-07!12;UBERON:0007277!3.86e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;7.35e-36;9!UBERON:0002308;7.35e-36;9!UBERON:0009663;5.35e-26;7!UBERON:0002298;1.24e-21;6!UBERON:0000369;8.40e-21;4!UBERON:0002435;8.40e-21;4!UBERON:0000204;8.40e-21;4!UBERON:0002420;4.22e-20;9!UBERON:0007245;4.22e-20;9!UBERON:0010009;4.22e-20;9!UBERON:0010011;4.22e-20;9!UBERON:0000454;4.22e-20;9!UBERON:0005383;3.24e-16;3!UBERON:0005382;3.24e-16;3!UBERON:0001896;6.14e-16;3!UBERON:0005290;6.14e-16;3!UBERON:0003528;9.08e-14;34!UBERON:0002020;9.08e-14;34!UBERON:0000073;1.81e-13;53!UBERON:0002616;1.81e-13;53!UBERON:0000160;1.06e-12;17!UBERON:0005409;1.07e-12;22!UBERON:0001017;4.24e-12;75!UBERON:0001905;5.06e-12;2!UBERON:0002757;5.06e-12;2!UBERON:0010134;5.06e-12;2!UBERON:0005408;5.06e-12;2!UBERON:0001899;5.06e-12;2!UBERON:0002148;7.74e-12;2!UBERON:0006331;7.74e-12;2!UBERON:0009662;7.74e-12;2!UBERON:0002780;8.27e-12;41!UBERON:0001890;8.27e-12;41!UBERON:0000955;1.70e-11;68!UBERON:0001875;2.20e-11;2!UBERON:0006514;2.20e-11;2!UBERON:0001873;2.26e-11;2!UBERON:0004733;1.08e-10;12!UBERON:0002028;1.08e-10;12!UBERON:0002791;1.12e-10;32!UBERON:0001869;3.11e-10;32!UBERON:0004732;7.52e-10;13!UBERON:0002108;2.76e-09;4!UBERON:0001016;4.53e-09;83!UBERON:0001893;2.39e-08;34!UBERON:0000988;3.65e-08;3!UBERON:0002240;4.12e-08;3!UBERON:0005174;4.12e-08;3!UBERON:0001137;4.12e-08;3!UBERON:0004921;9.22e-08;33!UBERON:0000059;1.38e-07;11!UBERON:0001894;2.27e-07;7!UBERON:0007023;4.84e-07;114!UBERON:0000922;5.82e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,6.00e-36,9;UBERON:0002308,6.00e-36,9;UBERON:0001049,2.22e-28,56;UBERON:0005068,2.22e-28,56;UBERON:0006241,2.22e-28,56;UBERON:0007135,2.22e-28,56;UBERON:0009663,4.41e-26,7;UBERON:0007023,2.48e-24,114;UBERON:0000073,1.08e-23,53;UBERON:0002616,1.08e-23,53;UBERON:0001017,1.30e-22,81;UBERON:0003075,2.04e-22,82;UBERON:0007284,2.04e-22,82;UBERON:0002298,1.26e-21,6;UBERON:0002346,3.64e-21,86;UBERON:0000369,7.40e-21,4;UBERON:0002435,7.40e-21,4;UBERON:0000204,7.40e-21,4;UBERON:0010082,7.40e-21,4;UBERON:0002420,3.63e-20,9;UBERON:0007245,3.63e-20,9;UBERON:0010009,3.63e-20,9;UBERON:0010011,3.63e-20,9;UBERON:0000454,3.63e-20,9;UBERON:0001016,6.24e-20,89;UBERON:0000955,1.20e-19,68;UBERON:0006238,1.20e-19,68;UBERON:0010371,1.34e-18,104;UBERON:0011216,2.09e-16,223;UBERON:0003076,2.70e-16,15;UBERON:0003057,2.70e-16,15;UBERON:0005383,3.24e-16,3;UBERON:0005382,3.24e-16,3;UBERON:0001896,6.30e-16,3;UBERON:0005290,6.30e-16,3;UBERON:0010096,6.30e-16,3;UBERON:0003528,1.44e-15,34;UBERON:0002020,1.44e-15,34;UBERON:0002780,4.06e-15,41;UBERON:0001890,4.06e-15,41;UBERON:0003080,4.06e-15,41;UBERON:0006240,4.06e-15,41;UBERON:0000160,1.04e-12,17;UBERON:0010314,3.27e-12,132;UBERON:0001905,5.07e-12,2;UBERON:0002757,5.07e-12,2;UBERON:0010134,5.07e-12,2;UBERON:0005408,5.07e-12,2;UBERON:0001899,5.07e-12,2;UBERON:0002148,7.75e-12,2;UBERON:0006331,7.75e-12,2;UBERON:0009662,7.75e-12,2;UBERON:0004121,1.47e-11,171;UBERON:0000924,1.47e-11,171;UBERON:0006601,1.47e-11,171;UBERON:0001875,1.99e-11,2;UBERON:0006514,1.99e-11,2;UBERON:0001873,2.20e-11,2;UBERON:0010122,2.20e-11,2;UBERON:0003056,3.83e-11,61;UBERON:0005409,4.32e-11,25;UBERON:0002791,6.32e-11,32;UBERON:0001869,6.32e-11,32;UBERON:0004733,1.09e-10,12;UBERON:0002028,1.09e-10,12;UBERON:0007277,1.09e-10,12;UBERON:0001893,3.26e-10,34;UBERON:0004732,7.59e-10,13;UBERON:0002108,3.06e-09,4;UBERON:0000988,3.65e-08,3;UBERON:0002240,4.20e-08,3;UBERON:0005174,4.20e-08,3;UBERON:0001137,4.20e-08,3;UBERON:0000025,5.96e-08,192;UBERON:0000059,1.28e-07,11;UBERON:0001894,2.25e-07,7;UBERON:0006222,2.25e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,2.46608514092334,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,4.42870692906919,5.66803261539417,0,0,0,19.3059149495496,0,0,3.77056266668606,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.76915129006678,6.11030144933625,0,0,0,0.202203398942031,0,2.57690890297873,0,0,0,0.394584402849391,2.41981432097328,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.969890164884194,0,2.03382666702479,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,22.815970970972,2.60120219894787,0,0,0,0.558564802544508,1.14580212005842,0.717873024576814,0,0.429226048136571,0,0.604651252380536,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.182248669974074,0,0.236417121897595,0.209818352539992,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,57.7894814936131,21.2894488805731,0,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88091034828085,1.44207766997908,7.5136647559074,0,0,0,0,0,0,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0,0,0,0,147.305017684526,0,0,2.89031512934068,0,0,0,1.00828678488687,0,0.322951291263702,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,4.92277328116398,0.548257766857182,1.48863353516788,0,0,1890.49177881447,598.921309271725,0,0,0,0,0,0.883606528698812,0,0,0,0.470958557103084,5.34193005714407,0,10.9579046461139,0,0,1.1436247068265,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,1.66488127088596,0,0,0,1.08043821351123,1.74847648403166,0,2.94177986104687,0,13.3489757638163,0.297046400327086,22.4007535619202,0,0,0,0,0,0,0,3.65168194123259,0,0,0,0,0.436350690340377,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.620597975171371,0,0.952257725854961,0,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.435433495793923,0,0.134704106029175,0.286888821570705,0.99798106963804,0,0,0,0,0,1.58913877437726,0.813792356631477,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@SLC5A7 | |||
}} |
Latest revision as of 05:45, 16 September 2015
Short description: | p1@SLC5A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC5A7_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 0bp_to_ENST00000409059, ENST00000540517_5end |
EntrezGene: | SLC5A7 |
HGNC: | 14025 |
UniProt: | Q9GZV3F5H382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 8.34e-07 | 1 |