FFCP PHASE1:Hg19::chr17:46627545..46627560,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:46627545..46627560,+ | |||
|description=CAGE_peak_at_chr17:46627545..46627560,+ | |||
|id=chr17:46627545..46627560,+ | |||
|ontology_enrichment_celltype=CL:0000183!9.31e-17!59;CL:0000055!8.87e-14!180;CL:0000680!1.15e-13!57;CL:0000056!1.15e-13!57;CL:0000355!1.15e-13!57;CL:0000187!1.17e-13!54;CL:0002539!1.65e-13!10;CL:1000507!6.64e-13!12;CL:1000494!6.64e-13!12;CL:0000192!1.66e-12!42;CL:0000514!1.66e-12!42;CL:0000393!1.54e-11!60;CL:0000211!1.54e-11!60;CL:1000449!4.56e-11!16;CL:0002551!1.94e-10!6;CL:1000497!1.63e-09!18;CL:0002518!1.63e-09!18;CL:0000222!1.77e-09!119;CL:0002371!2.58e-08!591;CL:0000144!2.79e-08!625;CL:0000057!1.52e-07!75;CL:0002681!1.69e-07!13;CL:0002584!1.69e-07!13;CL:0000359!4.62e-07!32;CL:0002334!5.80e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.11e-18;10!CL:1000494;1.11e-18;10!CL:0002539;1.54e-15;10!CL:1000449;3.68e-15;15!CL:0002551;2.63e-13;6!CL:1000497;3.58e-13;17!CL:0002518;3.58e-13;17!CL:0002559;4.44e-11;5!CL:0000632;7.79e-10;3!CL:0000192;1.17e-09;43!CL:0002504;1.97e-09;3!CL:1000279;1.97e-09;3!CL:1000280;1.97e-09;3!CL:0002681;5.27e-09;12!CL:0002584;5.27e-09;12!CL:0000187;3.13e-08;55!CL:0002554;4.63e-08;2!CL:0002561;7.86e-08;2!CL:0002600;2.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.11e-18,10;CL:1000494,1.11e-18,10;CL:0002539,1.19e-15,10;CL:1000449,3.92e-15,15;CL:0000192,2.78e-13,43;CL:0000514,2.78e-13,43;CL:1000497,3.79e-13,17;CL:0002518,3.79e-13,17;CL:0002551,3.88e-13,6;CL:0002559,4.34e-11,5;CL:0000187,5.81e-11,55;CL:0000680,3.38e-10,58;CL:0000056,3.38e-10,58;CL:0000355,3.38e-10,58;CL:0000632,7.57e-10,3;CL:0000222,8.68e-10,121;CL:0000393,1.65e-09,61;CL:0000211,1.65e-09,61;CL:0002504,1.88e-09,3;CL:1000279,1.88e-09,3;CL:1000280,1.88e-09,3;CL:0002681,5.21e-09,12;CL:0002584,5.21e-09,12;CL:0002554,4.63e-08,2;CL:0002561,8.69e-08,2;CL:0002600,2.36e-07,2;CL:0002195,7.90e-07,2;CL:0002571,7.90e-07,2;CL:0002602,7.90e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.17e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.16e-22!143;UBERON:0004290!1.32e-19!70;UBERON:0000914!3.16e-17!83;UBERON:0002329!3.16e-17!83;UBERON:0003077!3.16e-17!83;UBERON:0003059!3.16e-17!83;UBERON:0007282!3.16e-17!83;UBERON:0009618!3.16e-17!83;UBERON:0007285!3.16e-17!83;UBERON:0002100!2.29e-16!216;UBERON:0000486!3.62e-15!82;UBERON:0001135!7.37e-15!15;UBERON:0003104!9.84e-14!238;UBERON:0009142!9.84e-14!238;UBERON:0004237!1.65e-13!10;UBERON:0004695!1.65e-13!10;UBERON:0002111!1.65e-13!10;UBERON:0004178!1.65e-13!10;UBERON:0009773!6.64e-13!12;UBERON:0001231!6.64e-13!12;UBERON:0004810!6.64e-13!12;UBERON:0001134!2.96e-12!61;UBERON:0002036!2.96e-12!61;UBERON:0003082!2.96e-12!61;UBERON:0002067!5.70e-12!9;UBERON:0004016!5.70e-12!9;UBERON:0010083!5.70e-12!9;UBERON:0002385!1.27e-11!63;UBERON:0001015!1.27e-11!63;UBERON:0000383!1.27e-11!63;UBERON:0000080!2.97e-11!18;UBERON:0002120!2.97e-11!18;UBERON:0004875!2.97e-11!18;UBERON:0005721!2.97e-11!18;UBERON:0005754!2.97e-11!18;UBERON:0007297!2.97e-11!18;UBERON:0004211!4.56e-11!16;UBERON:0001285!4.56e-11!16;UBERON:0007684!4.56e-11!16;UBERON:0003220!4.56e-11!16;UBERON:0004208!4.56e-11!16;UBERON:0003887!1.14e-10!21;UBERON:0006555!3.03e-10!17;UBERON:0005103!3.03e-10!17;UBERON:0000083!3.03e-10!17;UBERON:0009201!3.03e-10!17;UBERON:0004819!3.03e-10!17;UBERON:0006553!3.03e-10!17;UBERON:0003074!3.03e-10!17;UBERON:0003060!3.03e-10!17;UBERON:0004876!8.31e-10!20;UBERON:0000058!3.34e-09!26;UBERON:0000475!4.29e-09!365;UBERON:0000481!4.82e-09!347;UBERON:0000353!1.18e-08!17;UBERON:0002113!1.67e-07!27;UBERON:0003918!1.67e-07!27;UBERON:0005095!1.67e-07!27;UBERON:0007687!1.67e-07!27;UBERON:0001225!1.69e-07!13;UBERON:0008987!1.69e-07!13;UBERON:0002417!3.39e-07!61;UBERON:0000916!3.39e-07!61;UBERON:0000490!4.26e-07!138;UBERON:0003914!5.53e-07!118;UBERON:0005172!6.39e-07!55;UBERON:0005173!6.39e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;1.58e-19;15!UBERON:0004211;1.11e-18;10!UBERON:0009773;1.11e-18;10!UBERON:0001231;1.11e-18;10!UBERON:0004810;1.11e-18;10!UBERON:0002067;6.91e-17;9!UBERON:0004237;1.54e-15;10!UBERON:0004695;1.54e-15;10!UBERON:0002111;1.54e-15;10!UBERON:0004178;1.54e-15;10!UBERON:0006555;3.68e-15;15!UBERON:0004819;3.68e-15;15!UBERON:0001285;3.68e-15;15!UBERON:0007684;3.68e-15;15!UBERON:0002073;4.44e-11;5!UBERON:0002385;6.38e-10;31!UBERON:0001015;6.38e-10;31!UBERON:0000383;6.38e-10;31!UBERON:0011135;1.09e-09;5!UBERON:0002216;1.09e-09;5!UBERON:0011134;1.09e-09;5!UBERON:0002209;1.09e-09;5!UBERON:0002213;1.09e-09;5!UBERON:0007844;1.09e-09;5!UBERON:0011138;1.09e-09;5!UBERON:0001130;1.09e-09;5!UBERON:0001066;1.09e-09;5!UBERON:0001468;1.09e-09;5!UBERON:0000353;1.27e-09;15!UBERON:0001225;5.27e-09;12!UBERON:0008987;5.27e-09;12!UBERON:0002113;7.81e-09;24!UBERON:0011143;7.81e-09;24!UBERON:0000947;1.13e-08;21!UBERON:0010191;1.13e-08;21!UBERON:0005933;7.86e-08;2!UBERON:0005942;7.86e-08;2!UBERON:0005932;7.86e-08;2!UBERON:0005172;1.11e-07;52!UBERON:0005173;1.11e-07;52!UBERON:0001851;4.66e-07;15!UBERON:0000489;4.99e-07;29!UBERON:0006554;9.67e-07;30!UBERON:0001008;9.67e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.04e-24,160;UBERON:0009142,4.04e-24,160;UBERON:0001135,1.21e-19,15;UBERON:0007503,5.72e-19,78;UBERON:0004810,1.11e-18,10;UBERON:0002329,7.75e-18,71;UBERON:0003059,7.75e-18,71;UBERON:0007282,7.75e-18,71;UBERON:0004290,7.75e-18,71;UBERON:0009618,7.75e-18,71;UBERON:0003077,1.66e-17,72;UBERON:0007285,1.66e-17,72;UBERON:0007524,3.50e-17,73;UBERON:0005256,7.82e-17,122;UBERON:0002067,9.03e-17,9;UBERON:0004016,9.03e-17,9;UBERON:0010083,9.03e-17,9;UBERON:0004237,1.19e-15,10;UBERON:0004695,1.19e-15,10;UBERON:0002111,1.19e-15,10;UBERON:0004178,1.19e-15,10;UBERON:0004211,3.92e-15,15;UBERON:0009773,3.92e-15,15;UBERON:0001231,3.92e-15,15;UBERON:0001285,3.92e-15,15;UBERON:0007684,3.92e-15,15;UBERON:0004208,3.92e-15,15;UBERON:0000486,2.17e-14,83;UBERON:0002100,2.86e-14,199;UBERON:0006555,4.45e-14,16;UBERON:0004819,4.45e-14,16;UBERON:0000490,1.59e-11,148;UBERON:0002073,4.34e-11,5;UBERON:0005086,4.34e-11,5;UBERON:0000483,1.44e-10,306;UBERON:0000119,2.32e-10,309;UBERON:0011135,1.11e-09,5;UBERON:0002216,1.11e-09,5;UBERON:0011134,1.11e-09,5;UBERON:0002209,1.11e-09,5;UBERON:0002213,1.11e-09,5;UBERON:0005856,1.11e-09,5;UBERON:0005866,1.11e-09,5;UBERON:0005863,1.11e-09,5;UBERON:0007844,1.11e-09,5;UBERON:0011138,1.11e-09,5;UBERON:0001130,1.11e-09,5;UBERON:0001066,1.11e-09,5;UBERON:0001468,1.11e-09,5;UBERON:0000353,1.26e-09,15;UBERON:0003914,2.34e-09,117;UBERON:0001134,2.70e-09,62;UBERON:0002036,2.70e-09,62;UBERON:0003082,2.70e-09,62;UBERON:0005172,2.80e-09,54;UBERON:0005173,2.80e-09,54;UBERON:0001225,5.21e-09,12;UBERON:0008987,5.21e-09,12;UBERON:0002385,6.89e-09,64;UBERON:0001015,6.89e-09,64;UBERON:0000383,6.89e-09,64;UBERON:0000947,8.90e-09,21;UBERON:0010191,8.90e-09,21;UBERON:0002417,5.12e-08,60;UBERON:0000916,5.12e-08,60;UBERON:0002113,5.18e-08,26;UBERON:0003918,5.18e-08,26;UBERON:0011143,5.18e-08,26;UBERON:0005095,5.18e-08,26;UBERON:0007687,5.18e-08,26;UBERON:0005933,8.69e-08,2;UBERON:0005942,8.69e-08,2;UBERON:0005932,8.69e-08,2;UBERON:0005177,2.32e-07,101;UBERON:0001851,4.61e-07,15;UBERON:0006444,7.90e-07,2;UBERON:0001995,7.90e-07,2;UBERON:0004715,7.90e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,3.44027511102112,2.09340350391728,0,0,1.60896258848061,1.65698687863958,4.70627602516243,4.82155622419182,5.84248072309899,4.39139518911456,1.10808952269109,5.50801866359483,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85372853138506,0,0,0,0,0,0,0,0,0,0,0,3.1216007683032,0.570471821544449,1.04614076386261,3.28816596202542,4.20869655357142,4.77532742787645,0,0,0,0,0,15.4727431529464,15.090980978141,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.843881661206331,0.292311015483596,0,0.460249493211497,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,3.85944562915731,5.52539685409922,4.17931135228781,5.77503585335668,0,0,0,0,0,0,0,0,0,0,11.2193419042757,2.4694440679884,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,2.83698264046557,0,1.57275793023962,0.542621605391443,0,0,1.77695974371273,0.791951872933429,2.41151501647669,0.871533458600294,1.59956785891291,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,3.25518028439683,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0,0,3.32870879020994,0,0,0.306923946576125,0.280660094433074,0.640695746278505,0,0,0,1.07946785661859,0.177561725313127,1.47828880824856,2.59627214591811,0.929683027679674,0,0.40101294060657,0,0,0,0,3.60959690325929,4.85196623757813,2.35304930753057,1.46139224653261,1.26661954671451,0,0,0,0,0.812839312631559,2.00675909541941,3.3133915495855,0.831076008928724,2.46262230194396,0,0,0,0.984043937099117,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0.770243085573222,1.07452572308291,0.413509717453592,0,0,0.340906509664404,0,0,0,0,0,16.269594225405,7.24068397710472,0.6970372701606,0.308033580176089,0,1.73986598415015,0,0,0,0.632758849437452,4.19386426632415,60.3918787494748,0,0,0,1.07923474549989,1.92175920815238,2.12062324222236,0,0,0,2.43816869544795,0,0,0,0,0,0,0,0,21.4146947678674,1.31178950409327,0,0.30982349809975,0,0.860468113224309,0.0982490410131212,0,0,0,0,0,1.04980416073495,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,2.92425886013794,1.5652351854352,0.450772826991655,2.28483127301277,1.62748293281865,0,0.107410557042488,0,0,2.00013882331577,0.686791410365586,0.336749488765919,0,0,0,0,0,1.15761237161917,0,0,0,0,3.18040462702586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:46627545..46627560,+ | |||
}} |
Latest revision as of 18:07, 25 July 2015
Short description: | p@chr17:46627545..46627560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46627545..46627560, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.11e-18 | 10 |
nephron tubule epithelial cell | 1.11e-18 | 10 |
aortic smooth muscle cell | 1.19e-15 | 10 |
epithelial cell of nephron | 3.92e-15 | 15 |
smooth muscle cell | 2.78e-13 | 43 |
smooth muscle myoblast | 2.78e-13 | 43 |
kidney cell | 3.79e-13 | 17 |
kidney epithelial cell | 3.79e-13 | 17 |
fibroblast of dermis | 3.88e-13 | 6 |
hair follicle cell | 4.34e-11 | 5 |
muscle cell | 5.81e-11 | 55 |
muscle precursor cell | 3.38e-10 | 58 |
myoblast | 3.38e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.38e-10 | 58 |
hepatic stellate cell | 7.57e-10 | 3 |
mesodermal cell | 8.68e-10 | 121 |
electrically responsive cell | 1.65e-09 | 61 |
electrically active cell | 1.65e-09 | 61 |
enteric smooth muscle cell | 1.88e-09 | 3 |
smooth muscle cell of large intestine | 1.88e-09 | 3 |
smooth muscle cell of colon | 1.88e-09 | 3 |
kidney cortical cell | 5.21e-09 | 12 |
renal cortical epithelial cell | 5.21e-09 | 12 |
fibroblast of lymphatic vessel | 4.63e-08 | 2 |
outer root sheath cell | 8.69e-08 | 2 |
smooth muscle cell of trachea | 2.36e-07 | 2 |
hepatic stem cell | 7.90e-07 | 2 |
hepatic mesenchymal stem cell | 7.90e-07 | 2 |
annulus pulposus cell | 7.90e-07 | 2 |