FFCP PHASE1:Hg19::chr11:75201791..75201815,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81544 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28804 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000529721,uc001owo.3_5end | |||
|cluster_id=chr11:75201791..75201815,- | |||
|description=CAGE_peak_3_at_GDPD5_5end | |||
|id=chr11:75201791..75201815,- | |||
|ontology_enrichment_celltype=CL:0000066!2.86e-32!254;CL:1000497!8.93e-13!18;CL:0002518!8.93e-13!18;CL:1000449!1.35e-12!16;CL:0000076!1.23e-11!62;CL:0002321!1.40e-11!248;CL:0000220!2.64e-11!246;CL:0000077!7.84e-11!19;CL:1000507!2.16e-10!12;CL:1000494!2.16e-10!12;CL:0002681!3.46e-09!13;CL:0002584!3.46e-09!13;CL:0000243!3.06e-08!15;CL:0000125!3.06e-08!15;CL:0000030!3.06e-08!15;CL:0000339!3.06e-08!15;CL:0000213!6.77e-08!57;CL:0000215!6.77e-08!57;CL:0000548!1.19e-07!679;CL:0000004!1.19e-07!679;CL:0000255!1.19e-07!679;CL:0000012!1.92e-07!682;CL:1000612!4.24e-07!7;CL:1000746!4.24e-07!7;CL:0000095!4.70e-07!17;CL:0000123!4.70e-07!17;CL:0002319!7.53e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.63e-22;19!CL:1000497;1.28e-16;17!CL:0002518;1.28e-16;17!CL:1000449;2.23e-15;15!CL:1000507;1.78e-14;10!CL:1000494;1.78e-14;10!CL:0002681;1.01e-11;12!CL:0002584;1.01e-11;12!CL:0002586;2.19e-11;3!CL:0000064;1.65e-10;3!CL:0000067;1.65e-10;3!CL:0005012;1.65e-10;3!CL:0002304;1.65e-10;3!CL:0000149;1.27e-08;4!CL:0000075;1.01e-07;27!CL:0000306;1.59e-07;4!CL:0002222;1.59e-07;4!CL:0002224;1.59e-07;4!CL:1000746;2.08e-07;7!CL:1000612;2.08e-07;7!CL:0000650;3.00e-07;2!CL:1000500;3.00e-07;2!CL:1000618;3.00e-07;2!CL:1001318;3.00e-07;2!CL:0002173;3.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.53e-22,19;CL:0000066,7.86e-21,253;CL:1000497,1.61e-16,17;CL:0002518,1.61e-16,17;CL:1000449,2.77e-15,15;CL:1000507,2.15e-14,10;CL:1000494,2.15e-14,10;CL:0002681,1.41e-11,12;CL:0002584,1.41e-11,12;CL:0002586,2.06e-11,3;CL:0000064,9.45e-11,3;CL:0000067,9.45e-11,3;CL:0005012,9.45e-11,3;CL:0002304,9.45e-11,3;CL:0000149,1.22e-08,4;CL:0000076,7.77e-08,63;CL:0000213,9.70e-08,58;CL:0000215,9.70e-08,58;CL:0000075,1.12e-07,27;CL:0000306,1.46e-07,4;CL:0002222,1.46e-07,4;CL:0002224,1.46e-07,4;CL:1000746,1.81e-07,7;CL:1000612,1.81e-07,7;CL:0000650,2.09e-07,2;CL:1000500,2.09e-07,2;CL:1000618,2.09e-07,2;CL:1001318,2.09e-07,2;CL:0002173,2.09e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.03e-11!106;DOID:162!1.19e-09!235;DOID:14566!1.80e-09!239;DOID:0050687!2.33e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.04e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.26e-13!11;UBERON:0004211!1.35e-12!16;UBERON:0001285!1.35e-12!16;UBERON:0007684!1.35e-12!16;UBERON:0003220!1.35e-12!16;UBERON:0004208!1.35e-12!16;UBERON:0006555!1.28e-11!17;UBERON:0005103!1.28e-11!17;UBERON:0000083!1.28e-11!17;UBERON:0009201!1.28e-11!17;UBERON:0004819!1.28e-11!17;UBERON:0006553!1.28e-11!17;UBERON:0003074!1.28e-11!17;UBERON:0003060!1.28e-11!17;UBERON:0000080!9.45e-11!18;UBERON:0002120!9.45e-11!18;UBERON:0004875!9.45e-11!18;UBERON:0005721!9.45e-11!18;UBERON:0005754!9.45e-11!18;UBERON:0007297!9.45e-11!18;UBERON:0009773!2.16e-10!12;UBERON:0001231!2.16e-10!12;UBERON:0004810!2.16e-10!12;UBERON:0001851!2.40e-10!16;UBERON:0000058!3.90e-10!26;UBERON:0004876!2.75e-09!20;UBERON:0001225!3.46e-09!13;UBERON:0008987!3.46e-09!13;UBERON:0003887!1.16e-08!21;UBERON:0003064!6.66e-08!37;UBERON:0000019!1.21e-07!19;UBERON:0000047!1.21e-07!19;UBERON:0004088!1.21e-07!19;UBERON:0003072!1.21e-07!19;UBERON:0003071!1.21e-07!19;UBERON:0004128!1.21e-07!19;UBERON:0002113!4.01e-07!27;UBERON:0003918!4.01e-07!27;UBERON:0005095!4.01e-07!27;UBERON:0007687!4.01e-07!27;UBERON:0003886!4.19e-07!63;UBERON:0000970!4.20e-07!20;UBERON:0000074!4.24e-07!7;UBERON:0001229!4.24e-07!7;UBERON:0001230!4.24e-07!7;UBERON:0005749!4.24e-07!7;UBERON:0004199!4.24e-07!7;UBERON:0004209!4.24e-07!7;UBERON:0004198!4.24e-07!7;UBERON:0000488!6.35e-07!4;UBERON:0006554!7.28e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.56e-28;11!UBERON:0000019;1.81e-15;19!UBERON:0000047;1.81e-15;19!UBERON:0004088;1.81e-15;19!UBERON:0010230;1.81e-15;19!UBERON:0006555;2.23e-15;15!UBERON:0004819;2.23e-15;15!UBERON:0001285;2.23e-15;15!UBERON:0007684;2.23e-15;15!UBERON:0000970;1.38e-14;20!UBERON:0004211;1.78e-14;10!UBERON:0009773;1.78e-14;10!UBERON:0001231;1.78e-14;10!UBERON:0004810;1.78e-14;10!UBERON:0002104;8.64e-14;21!UBERON:0001456;8.64e-14;21!UBERON:0000488;1.46e-13;4!UBERON:0006554;1.53e-12;30!UBERON:0001008;1.53e-12;30!UBERON:0000020;2.10e-12;23!UBERON:0001851;3.47e-12;15!UBERON:0010371;4.65e-12;31!UBERON:0001032;8.47e-12;24!UBERON:0004456;8.47e-12;24!UBERON:0001225;1.01e-11;12!UBERON:0008987;1.01e-11;12!UBERON:0001781;2.19e-11;3!UBERON:0001782;2.19e-11;3!UBERON:0002113;3.59e-11;24!UBERON:0011143;3.59e-11;24!UBERON:0001778;1.65e-10;3!UBERON:0001775;1.65e-10;3!UBERON:0001801;2.50e-10;14!UBERON:0000353;3.56e-09;15!UBERON:0002203;4.85e-09;6!UBERON:0001768;4.85e-09;6!UBERON:0002200;4.85e-09;6!UBERON:0000489;6.70e-09;29!UBERON:0010077;1.59e-07;4!UBERON:0005389;1.59e-07;4!UBERON:0000484;1.59e-07;4!UBERON:0000965;1.59e-07;4!UBERON:0001803;1.59e-07;4!UBERON:0000074;2.08e-07;7!UBERON:0001229;2.08e-07;7!UBERON:0003567;3.00e-07;2!UBERON:0003838;3.00e-07;2!UBERON:0003586;3.00e-07;2!UBERON:0005169;3.00e-07;2!UBERON:0002321;3.00e-07;2!UBERON:0005215;3.00e-07;2!UBERON:0002303;3.00e-07;2!UBERON:0002319;3.00e-07;2!UBERON:0000966;5.89e-07;5!UBERON:0005388;5.89e-07;5!UBERON:0001802;5.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.23e-28,11;UBERON:0004211,2.77e-15,15;UBERON:0009773,2.77e-15,15;UBERON:0001231,2.77e-15,15;UBERON:0001285,2.77e-15,15;UBERON:0007684,2.77e-15,15;UBERON:0004208,2.77e-15,15;UBERON:0000019,9.39e-15,20;UBERON:0000047,9.39e-15,20;UBERON:0010312,9.39e-15,20;UBERON:0004088,9.39e-15,20;UBERON:0010230,9.39e-15,20;UBERON:0003072,9.39e-15,20;UBERON:0004128,9.39e-15,20;UBERON:0003071,9.39e-15,20;UBERON:0004810,2.15e-14,10;UBERON:0006555,3.21e-14,16;UBERON:0004819,3.21e-14,16;UBERON:0000970,6.01e-14,21;UBERON:0002104,6.01e-14,21;UBERON:0000488,7.71e-14,4;UBERON:0001456,3.25e-13,22;UBERON:0001851,4.71e-12,15;UBERON:0000020,6.20e-12,24;UBERON:0001032,6.20e-12,24;UBERON:0004456,6.20e-12,24;UBERON:0001225,1.41e-11,12;UBERON:0008987,1.41e-11,12;UBERON:0001782,2.06e-11,3;UBERON:0005424,2.06e-11,3;UBERON:0001778,9.45e-11,3;UBERON:0001775,9.45e-11,3;UBERON:0005085,1.62e-10,31;UBERON:0001801,1.76e-10,14;UBERON:0002113,4.28e-10,26;UBERON:0003918,4.28e-10,26;UBERON:0011143,4.28e-10,26;UBERON:0005095,4.28e-10,26;UBERON:0007687,4.28e-10,26;UBERON:0002203,3.21e-09,6;UBERON:0001768,3.21e-09,6;UBERON:0002200,3.21e-09,6;UBERON:0000353,4.61e-09,15;UBERON:0001781,1.22e-08,4;UBERON:0000489,3.77e-08,31;UBERON:0010077,1.46e-07,4;UBERON:0005389,1.46e-07,4;UBERON:0000484,1.46e-07,4;UBERON:0002546,1.46e-07,4;UBERON:0000965,1.46e-07,4;UBERON:0001803,1.46e-07,4;UBERON:0003073,1.46e-07,4;UBERON:0005426,1.46e-07,4;UBERON:0010532,1.81e-07,7;UBERON:0000074,1.81e-07,7;UBERON:0001229,1.81e-07,7;UBERON:0001230,1.81e-07,7;UBERON:0003220,1.81e-07,7;UBERON:0005749,1.81e-07,7;UBERON:0004199,1.81e-07,7;UBERON:0004209,1.81e-07,7;UBERON:0004198,1.81e-07,7;UBERON:0003567,2.09e-07,2;UBERON:0003838,2.09e-07,2;UBERON:0003586,2.09e-07,2;UBERON:0005169,2.09e-07,2;UBERON:0002321,2.09e-07,2;UBERON:0005215,2.09e-07,2;UBERON:0002303,2.09e-07,2;UBERON:0002319,2.09e-07,2;UBERON:0006554,4.91e-07,47;UBERON:0001008,7.73e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.369363174230364,0.204000691244253,0,2.0036519099174,0.684372125364421,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59232305223458,4.21285855178871,1.93236528524877,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.835979866147242,0,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0.267899184852239,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,1.2333377420858,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0.67824236924195,0.57978255948989,1.63647672354501,0,0.487894824518382,0,0.348581828608555,0.10366105501537,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,3.77449182656756,0.219500570817251,0,0,0.555530670951178,0,0,2.88662684050547,1.62302566965108,0,0,0,0,0,0,0,0,0,0,1.34385702559088,0.283550194484773,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19967589418468,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.902399225814824,1.30926073077505,3.92174884588428,2.92278449306521,0.949964660035881,0,0.680374821106063,1.29549549661284,3.08454505380579,1.62567862526312,2.50844886927427,1.01950509218015,0,1.11937377361089,0,0,10.7709052548883,11.8085272451894,6.83294628795036,0,0.183138929636687,0.577566499444116,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.765676274967505,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,1.29151611801369,5.05414427002877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00177834520615,2.63686198762815,0.211125408127993,0,0.276283915531148,0,11.6586298052456,0,0,1.61763032065188,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,1.30586246527318,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,2.15231080825299,0,0,0,0,0.126373159256976,0,0,0,0.661983911750998,0,0,1.42304773014896,0,0.173559738335131,0,0.261177619741208,0,0,0,0,0,0,0,0,7.2632220062778,1.39100228192093,0,0,3.68730573157055,0,0.799238438328521,0,0,0,0,1.11827282008889,0.235694034616795,1.22313785466253,1.15063130943567,1.73396969981747,0.866851769704557,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.643012593860077,1.2378549293751,0,0,0,0,0,0,0,0.422401346077626,0,0.959575986597226,0,0,0,0,0,0,1.19730191562487,0,0,1.35974509824151,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.465788870628778,0,0,0,0.150257608997218,0,0,0,0.644463342254931,0,0,0,0,0,0,0.385239660814607,12.6520538911206,6.7858515910955,6.80117776536817,2.77826969188601,3.42631386309055,0,4.01441881309264,3.0699766941019,1.41351316756705,1.92914038270915,0,0,1.72715170865599,1.51929978088691,0,0,0,0,0.655219697692825,0.737318726261158,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.207471757392654,0,0,0.588886311006154,0,0,0,0,0.690359926060101,0,0,2.21875575573872,0,0,0.818859587550484,1.47856086217045,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0.177404740325278,0,0.857440047187092,0,0,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,2.37520350340484,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.68732060563215,0.31020638566432,1.91107787795487,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,3.65882632021729,0,0,1.22386595690378,0.26721740526556,0.36757959813938,0,0,0,0,0,0,0,0,0,6.16725244193374,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GDPD5 | |||
}} |
Latest revision as of 06:17, 20 September 2015
Short description: | p3@GDPD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDPD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529721, uc001owo.3_5end |
EntrezGene: | GDPD5 |
HGNC: | 28804 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.53e-22 | 19 |
epithelial cell | 7.86e-21 | 253 |
kidney cell | 1.61e-16 | 17 |
kidney epithelial cell | 1.61e-16 | 17 |
epithelial cell of nephron | 2.77e-15 | 15 |
kidney tubule cell | 2.15e-14 | 10 |
nephron tubule epithelial cell | 2.15e-14 | 10 |
kidney cortical cell | 1.41e-11 | 12 |
renal cortical epithelial cell | 1.41e-11 | 12 |
retinal pigment epithelial cell | 2.06e-11 | 3 |
ciliated cell | 9.45e-11 | 3 |
ciliated epithelial cell | 9.45e-11 | 3 |
multi-ciliated epithelial cell | 9.45e-11 | 3 |
non-pigmented ciliary epithelial cell | 9.45e-11 | 3 |
visual pigment cell | 1.22e-08 | 4 |
squamous epithelial cell | 7.77e-08 | 63 |
lining cell | 9.70e-08 | 58 |
barrier cell | 9.70e-08 | 58 |
columnar/cuboidal epithelial cell | 1.12e-07 | 27 |
crystallin accumulating cell | 1.46e-07 | 4 |
vertebrate lens cell | 1.46e-07 | 4 |
lens epithelial cell | 1.46e-07 | 4 |
glomerular cell | 1.81e-07 | 7 |
kidney corpuscule cell | 1.81e-07 | 7 |
mesangial cell | 2.09e-07 | 2 |
kidney interstitial cell | 2.09e-07 | 2 |
juxtaglomerular complex cell | 2.09e-07 | 2 |
renal interstitial pericyte | 2.09e-07 | 2 |
extraglomerular mesangial cell | 2.09e-07 | 2 |
Ontology term | p-value | n |
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