FFCP PHASE1:Hg19::chr6:50786591..50786614,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:50786591..50786614,+
|short_description=p1@TFAP2B
|description=CAGE_peak_1_at_TFAP2B_5end
|association_with_transcript=152bp_to_ENST00000263046,NM_003221,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7021 | |EntrezGene=7021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11743 | |HGNC=11743 | ||
|TSSclassifier=strong | |||
|UniProt=Q92481 | |UniProt=Q92481 | ||
|association_with_transcript=152bp_to_ENST00000263046,NM_003221,uc003pag.2_5end | |||
|cluster_id=chr6:50786591..50786614,+ | |||
|coexpression_cluster_id=C2863 | |||
|description=CAGE_peak_1_at_TFAP2B_5end | |||
|id=chr6:50786591..50786614,+ | |||
|ontology_enrichment_celltype=CL:1000507!5.56e-11!12;CL:1000494!5.56e-11!12;CL:1000449!3.35e-09!16;CL:0002322!9.46e-09!5;CL:0000075!1.43e-08!27;CL:1000497!6.70e-08!18;CL:0002518!6.70e-08!18;CL:0000221!1.54e-07!71;CL:0002077!2.32e-07!33;CL:0000362!5.72e-07!8;CL:0000133!7.85e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.07e-20;10!CL:1000494;1.07e-20;10!CL:1000449;3.75e-13;15!CL:1000497;2.21e-11;17!CL:0002518;2.21e-11;17!CL:0000239;3.53e-09;3!CL:1000615;3.53e-09;3!CL:0002306;3.53e-09;3!CL:0002322;7.98e-09;5!CL:0002321;4.00e-08;15!CL:0000075;6.11e-08;27!CL:0002681;1.55e-07;12!CL:0002584;1.55e-07;12!CL:0000123;5.63e-07;2!CL:0000242;5.63e-07;2!CL:0002367;6.85e-07;2!CL:0000362;7.01e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.09e-20,10;CL:1000494,1.09e-20,10;CL:1000449,3.81e-13,15;CL:1000497,2.24e-11,17;CL:0002518,2.24e-11,17;CL:0000239,3.39e-09,3;CL:1000615,3.39e-09,3;CL:0002306,3.39e-09,3;CL:0002322,8.58e-09,5;CL:0000075,6.51e-08,27;CL:0002681,1.58e-07,12;CL:0002584,1.58e-07,12;CL:0002077,5.47e-07,34;CL:0000242,5.64e-07,2;CL:0000362,6.74e-07,9;CL:0002367,6.86e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.17e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;1.07e-20;10!UBERON:0009773;1.07e-20;10!UBERON:0001231;1.07e-20;10!UBERON:0004810;1.07e-20;10!UBERON:0006555;3.75e-13;15!UBERON:0004819;3.75e-13;15!UBERON:0001285;3.75e-13;15!UBERON:0007684;3.75e-13;15!UBERON:0000489;2.47e-12;29!UBERON:0004733;2.62e-12;12!UBERON:0002028;2.62e-12;12!UBERON:0004732;2.98e-11;13!UBERON:0002113;3.29e-11;24!UBERON:0011143;3.29e-11;24!UBERON:0002298;5.05e-10;6!UBERON:0006853;3.53e-09;3!UBERON:0007685;3.53e-09;3!UBERON:0004134;3.53e-09;3!UBERON:0001444;1.62e-08;48!UBERON:0006554;1.78e-08;30!UBERON:0001008;1.78e-08;30!UBERON:0000153;2.87e-08;54!UBERON:0001896;1.05e-07;3!UBERON:0005290;1.05e-07;3!UBERON:0000033;1.15e-07;50!UBERON:0007811;1.50e-07;52!UBERON:0001225;1.55e-07;12!UBERON:0008987;1.55e-07;12!UBERON:0000970;2.53e-07;20!UBERON:0001044;2.90e-07;6!UBERON:0003293;2.90e-07;6!UBERON:0003294;2.90e-07;6!UBERON:0010047;2.90e-07;6!UBERON:0003408;2.90e-07;6!UBERON:0000167;2.90e-07;6!UBERON:0002680;3.82e-07;9!UBERON:0001895;3.82e-07;9!UBERON:0002104;6.60e-07;21!UBERON:0000165;6.69e-07;28!UBERON:0005969;6.85e-07;2!UBERON:0003956;6.85e-07;2!UBERON:0001456;7.14e-07;21 | |||
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| ||
|short_description=p1@TFAP2B | |||
}} | }} |
Latest revision as of 05:26, 19 September 2015
Short description: | p1@TFAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFAP2B_5end |
Coexpression cluster: | C2863_neuroepithelioma_breast_neuroblastoma_merkel_epididymis_neuroectodermal_Trabecular |
Association with transcript: | 152bp_to_ENST00000263046, NM_003221, uc003pag.2_5end |
EntrezGene: | TFAP2B |
HGNC: | 11743 |
UniProt: | Q92481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.09e-20 | 10 |
nephron tubule epithelial cell | 1.09e-20 | 10 |
epithelial cell of nephron | 3.81e-13 | 15 |
kidney cell | 2.24e-11 | 17 |
kidney epithelial cell | 2.24e-11 | 17 |
brush border epithelial cell | 3.39e-09 | 3 |
kidney cortex tubule cell | 3.39e-09 | 3 |
epithelial cell of proximal tubule | 3.39e-09 | 3 |
embryonic stem cell | 8.58e-09 | 5 |
columnar/cuboidal epithelial cell | 6.51e-08 | 27 |
kidney cortical cell | 1.58e-07 | 12 |
renal cortical epithelial cell | 1.58e-07 | 12 |
ecto-epithelial cell | 5.47e-07 | 34 |
Merkel cell | 5.64e-07 | 2 |
epidermal cell | 6.74e-07 | 9 |
trabecular meshwork cell | 6.86e-07 | 2 |