FFCP PHASE1:Hg19::chr6:132270228..132270243,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:132270228..132270243,-
|short_description=p17@CTGF
|description=CAGE_peak_17_at_CTGF_5end
|association_with_transcript=143bp_to_AF127918_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=143bp_to_AF127918_5end | |||
|cluster_id=chr6:132270228..132270243,- | |||
|description=CAGE_peak_17_at_CTGF_5end | |||
|id=chr6:132270228..132270243,- | |||
|ontology_enrichment_celltype=CL:0000055!6.66e-18!180;CL:0000222!1.80e-13!119;CL:0000183!2.89e-13!59;CL:0000680!9.90e-12!57;CL:0000056!9.90e-12!57;CL:0000355!9.90e-12!57;CL:0000187!1.83e-10!54;CL:0000393!2.38e-10!60;CL:0000211!2.38e-10!60;CL:0000192!2.45e-10!42;CL:0000514!2.45e-10!42;CL:0000220!1.35e-09!246;CL:0002321!2.57e-09!248;CL:0000359!3.16e-08!32;CL:0000057!3.04e-07!75;CL:0002371!3.44e-07!591;CL:0002139!9.13e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:1000746;3.58e-18;7!CL:1000612;3.58e-18;7!CL:0002188;3.90e-12;5!CL:0002590;8.96e-12;3!CL:0000064;2.25e-11;3!CL:0000067;2.25e-11;3!CL:0005012;2.25e-11;3!CL:0002304;2.25e-11;3!CL:1000449;5.12e-11;15!CL:0002681;2.54e-10;12!CL:0002584;2.54e-10;12!CL:0002138;5.09e-10;6!CL:1000497;1.34e-09;17!CL:0002518;1.34e-09;17!CL:0000115;2.08e-09;36!CL:0000650;7.06e-08;2!CL:1000500;7.06e-08;2!CL:1000618;7.06e-08;2!CL:1001318;7.06e-08;2!CL:0002173;7.06e-08;2!CL:0002595;5.49e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,4.10e-18,7;CL:1000612,4.10e-18,7;CL:0002188,2.48e-12,5;CL:0002590,5.51e-12,3;CL:0000064,8.88e-12,3;CL:0000067,8.88e-12,3;CL:0005012,8.88e-12,3;CL:0002304,8.88e-12,3;CL:0000222,2.86e-11,121;CL:1000449,5.59e-11,15;CL:0002681,2.74e-10,12;CL:0002584,2.74e-10,12;CL:0005020,3.64e-10,6;CL:0002138,3.64e-10,6;CL:0005022,3.64e-10,6;CL:0000115,4.18e-10,36;CL:1000497,1.45e-09,17;CL:0002518,1.45e-09,17;CL:0000192,5.83e-08,43;CL:0000514,5.83e-08,43;CL:0002078,1.24e-07,45;CL:0000650,1.43e-07,2;CL:1000500,1.43e-07,2;CL:1000618,1.43e-07,2;CL:1001318,1.43e-07,2;CL:0002173,1.43e-07,2;CL:0002321,6.39e-07,250;CL:0002595,7.37e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;5.09e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p17@CTGF | |||
}} | }} |
Latest revision as of 18:54, 24 September 2015
Short description: | p17@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CTGF_5end |
Coexpression cluster: | NA |
Association with transcript: | 143bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 4.10e-18 | 7 |
kidney corpuscule cell | 4.10e-18 | 7 |
glomerular endothelial cell | 2.48e-12 | 5 |
smooth muscle cell of the brain vasculature | 5.51e-12 | 3 |
ciliated cell | 8.88e-12 | 3 |
ciliated epithelial cell | 8.88e-12 | 3 |
multi-ciliated epithelial cell | 8.88e-12 | 3 |
non-pigmented ciliary epithelial cell | 8.88e-12 | 3 |
mesodermal cell | 2.86e-11 | 121 |
epithelial cell of nephron | 5.59e-11 | 15 |
kidney cortical cell | 2.74e-10 | 12 |
renal cortical epithelial cell | 2.74e-10 | 12 |
lymphangioblast | 3.64e-10 | 6 |
endothelial cell of lymphatic vessel | 3.64e-10 | 6 |
vascular lymphangioblast | 3.64e-10 | 6 |
endothelial cell | 4.18e-10 | 36 |
kidney cell | 1.45e-09 | 17 |
kidney epithelial cell | 1.45e-09 | 17 |
smooth muscle cell | 5.83e-08 | 43 |
smooth muscle myoblast | 5.83e-08 | 43 |
meso-epithelial cell | 1.24e-07 | 45 |
mesangial cell | 1.43e-07 | 2 |
kidney interstitial cell | 1.43e-07 | 2 |
juxtaglomerular complex cell | 1.43e-07 | 2 |
renal interstitial pericyte | 1.43e-07 | 2 |
extraglomerular mesangial cell | 1.43e-07 | 2 |
embryonic cell | 6.39e-07 | 250 |
smooth muscle cell of the subclavian artery | 7.37e-07 | 5 |