FFCP PHASE1:Hg19::chr3:35680783..35680788,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:35680783..35680788,+
|short_description=p29@ARPP21
|description=CAGE_peak_29_at_ARPP21_5end
|association_with_transcript=-292bp_to_ENST00000428373,uc003cfz...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10777 | |EntrezGene=10777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |HGNC=16968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-292bp_to_ENST00000428373,uc003cfz.2_5end | |||
|cluster_id=chr3:35680783..35680788,+ | |||
|coexpression_cluster_id=C636 | |||
|description=CAGE_peak_29_at_ARPP21_5end | |||
|id=chr3:35680783..35680788,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.31e-25;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-58!57;UBERON:0005068!2.43e-58!57;UBERON:0006241!2.43e-58!57;UBERON:0007135!2.43e-58!57;UBERON:0002616!4.46e-56!59;UBERON:0001017!2.09e-50!82;UBERON:0000955!6.69e-49!69;UBERON:0006238!6.69e-49!69;UBERON:0005743!1.23e-47!86;UBERON:0000073!6.48e-47!94;UBERON:0001016!6.48e-47!94;UBERON:0003075!3.74e-45!86;UBERON:0007284!3.74e-45!86;UBERON:0002346!3.80e-45!90;UBERON:0001950!6.19e-45!20;UBERON:0002780!5.46e-44!41;UBERON:0001890!5.46e-44!41;UBERON:0006240!5.46e-44!41;UBERON:0003080!8.48e-43!42;UBERON:0001893!7.92e-42!34;UBERON:0002020!1.18e-41!34;UBERON:0003528!1.18e-41!34;UBERON:0001869!6.23e-41!32;UBERON:0002619!1.34e-40!22;UBERON:0007023!4.59e-40!115;UBERON:0002791!3.38e-39!33;UBERON:0000153!3.34e-36!129;UBERON:0007811!3.34e-36!129;UBERON:0000956!2.38e-35!25;UBERON:0000203!2.38e-35!25;UBERON:0000033!2.85e-32!123;UBERON:0003056!9.10e-30!61;UBERON:0000924!1.93e-29!173;UBERON:0006601!1.93e-29!173;UBERON:0004121!6.97e-29!169;UBERON:0004733!1.59e-20!12;UBERON:0002028!1.59e-20!12;UBERON:0007277!1.59e-20!12;UBERON:0000200!5.46e-19!6;UBERON:0004732!8.37e-19!13;UBERON:0001872!4.33e-16!5;UBERON:0003076!4.74e-16!15;UBERON:0003057!4.74e-16!15;UBERON:0001871!7.69e-14!7;UBERON:0002298!8.43e-14!8;UBERON:0000064!7.34e-13!219;UBERON:0002680!1.11e-12!9;UBERON:0001895!1.11e-12!9;UBERON:0010092!1.11e-12!9;UBERON:0000025!8.27e-12!194;UBERON:0000475!4.11e-11!365;UBERON:0000483!4.20e-11!309;UBERON:0000119!6.84e-11!312;UBERON:0000481!8.43e-11!347;UBERON:0002021!1.10e-10!5;UBERON:0001896!2.63e-10!3;UBERON:0005290!2.63e-10!3;UBERON:0010096!2.63e-10!3;UBERON:0002771!3.08e-10!3;UBERON:0000988!4.76e-10!3;UBERON:0004111!4.89e-10!241;UBERON:0000477!7.91e-10!286;UBERON:0002308!3.83e-08!9;UBERON:0000125!3.83e-08!9;UBERON:0001870!1.61e-07!2;UBERON:0001897!2.29e-07!2;UBERON:0000369!2.29e-07!4;UBERON:0002435!2.29e-07!4;UBERON:0000204!2.29e-07!4;UBERON:0010082!2.29e-07!4;UBERON:0002148!6.79e-07!2;UBERON:0009662!6.79e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.49e-37;2!UBERON:0005058;2.49e-37;2!UBERON:0009113;2.49e-37;2!UBERON:0001389;1.71e-19;1!UBERON:0000026;1.71e-19;1!UBERON:0008784;1.71e-19;1!UBERON:0006058;1.71e-19;1!UBERON:0003663;1.71e-19;1!UBERON:0004256;1.71e-19;1!UBERON:0004708;1.71e-19;1!UBERON:0002101;1.71e-19;1!UBERON:0004709;1.71e-19;1!UBERON:0002529;1.71e-19;1!UBERON:0010538;1.71e-19;1!UBERON:0003661;1.71e-19;1!UBERON:0010890;1.71e-19;1!UBERON:0002471;1.71e-19;1!UBERON:0001383;1.71e-19;1!UBERON:0010758;1.71e-19;1!UBERON:0010707;1.71e-19;1!UBERON:0000978;1.71e-19;1!UBERON:0002103;1.71e-19;1!UBERON:0001665;1.71e-19;1!UBERON:0003823;1.71e-19;1!UBERON:0000154;1.71e-19;1!UBERON:0010709;1.71e-19;1!UBERON:0002680;1.17e-18;9!UBERON:0001895;1.17e-18;9!UBERON:0004177;1.35e-15;5!UBERON:0005057;1.35e-15;5!UBERON:0004733;3.61e-14;12!UBERON:0002028;3.61e-14;12!UBERON:0004732;3.94e-13;13!UBERON:0002037;4.52e-13;6!UBERON:0005090;1.97e-10;2!UBERON:0001630;1.97e-10;2!UBERON:0001897;2.99e-10;2!UBERON:0010225;2.99e-10;2!UBERON:0000073;2.86e-08;53!UBERON:0002616;2.86e-08;53!UBERON:0002114;2.25e-07;2!UBERON:0000988;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.30e-19,1;UBERON:0001389,1.30e-19,1;UBERON:0000026,1.30e-19,1;UBERON:0008784,1.30e-19,1;UBERON:0006058,1.30e-19,1;UBERON:0003663,1.30e-19,1;UBERON:0004256,1.30e-19,1;UBERON:0004708,1.30e-19,1;UBERON:0002101,1.30e-19,1;UBERON:0004709,1.30e-19,1;UBERON:0002529,1.30e-19,1;UBERON:0010538,1.30e-19,1;UBERON:0003661,1.30e-19,1;UBERON:0010890,1.30e-19,1;UBERON:0002471,1.30e-19,1;UBERON:0001383,1.30e-19,1;UBERON:0004357,1.30e-19,1;UBERON:0004347,1.30e-19,1;UBERON:0005420,1.30e-19,1;UBERON:0005732,1.30e-19,1;UBERON:0010758,1.30e-19,1;UBERON:0010707,1.30e-19,1;UBERON:0000978,1.30e-19,1;UBERON:0002103,1.30e-19,1;UBERON:0001665,1.30e-19,1;UBERON:0003823,1.30e-19,1;UBERON:0000154,1.30e-19,1;UBERON:0010709,1.30e-19,1;UBERON:0005733,1.30e-19,1;UBERON:0005730,1.30e-19,1;UBERON:0002370,3.57e-19,4;UBERON:0005058,3.57e-19,4;UBERON:0009113,3.57e-19,4;UBERON:0003295,3.57e-19,4;UBERON:0005562,3.57e-19,4;UBERON:0002680,1.10e-18,9;UBERON:0001895,1.10e-18,9;UBERON:0010092,1.10e-18,9;UBERON:0004733,3.45e-14,12;UBERON:0002028,3.45e-14,12;UBERON:0007277,3.45e-14,12;UBERON:0004732,3.78e-13,13;UBERON:0003351,4.01e-13,6;UBERON:0002037,4.81e-13,6;UBERON:0006215,4.81e-13,6;UBERON:0000073,6.97e-12,53;UBERON:0002616,6.97e-12,53;UBERON:0003076,1.76e-11,15;UBERON:0003057,1.76e-11,15;UBERON:0004177,2.18e-11,7;UBERON:0005057,2.18e-11,7;UBERON:0001049,2.99e-11,56;UBERON:0005068,2.99e-11,56;UBERON:0006241,2.99e-11,56;UBERON:0007135,2.99e-11,56;UBERON:0005090,1.72e-10,2;UBERON:0001630,1.72e-10,2;UBERON:0001897,2.72e-10,2;UBERON:0010225,2.72e-10,2;UBERON:0000955,3.94e-09,68;UBERON:0006238,3.94e-09,68;UBERON:0000974,3.03e-08,10;UBERON:0003408,3.03e-08,10;UBERON:0001042,3.03e-08,10;UBERON:0009145,3.03e-08,10;UBERON:0001017,1.14e-07,81;UBERON:0003075,1.14e-07,82;UBERON:0007284,1.14e-07,82;UBERON:0006562,1.42e-07,11;UBERON:0009722,1.42e-07,11;UBERON:0007690,1.42e-07,11;UBERON:0007023,2.10e-07,114;UBERON:0002114,2.32e-07,2;UBERON:0000988,2.63e-07,3;UBERON:0002346,2.63e-07,86;UBERON:0001016,6.77e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.569134746787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,5.75012151642368,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.876336514945499,0.573409195690071,0.554645257684261,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.957803154342908,0.205116364240755,2.26864526599546,0.484100767249525,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0.781078098613847,0.620060389503552,0.253663240775627,1.64092442705466,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0,0,1.90315252335129,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,1.33461648913121,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.20686599172379,0.426467963801962,0,2.1314340245882,3.35203457197633,0,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.569134746787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,5.75012151642368,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.876336514945499,0.573409195690071,0.554645257684261,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.957803154342908,0.205116364240755,2.26864526599546,0.484100767249525,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0.781078098613847,0.620060389503552,0.253663240775627,1.64092442705466,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0,0,1.90315252335129,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,1.33461648913121,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.20686599172379,0.426467963801962,0,2.1314340245882,3.35203457197633,0,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p29@ARPP21 | |||
}} | }} |
Latest revision as of 00:54, 18 September 2015
Short description: | p29@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_ARPP21_5end |
Coexpression cluster: | C636_thymus_skeletal_cerebellum_Hodgkin_temporal_duodenum_parietal |
Association with transcript: | -292bp_to_ENST00000428373, uc003cfz.2_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data