FFCP PHASE1:Hg19::chr3:177159744..177159791,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:177159744..177159791,+
|short_description=p1@ENST00000439009
|description=CAGE_peak_1_at_ENST00000439009_5end
|association_with_transcript=0bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000439009_5end | |||
|cluster_id=chr3:177159744..177159791,+ | |||
|coexpression_cluster_id=C465 | |||
|description=CAGE_peak_1_at_ENST00000439009_5end | |||
|id=chr3:177159744..177159791,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.51e-13!180;CL:0000057!1.16e-11!75;CL:0002620!3.73e-10!23;CL:0002334!2.56e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.47e-13;23!CL:0002622;8.47e-08;3!CL:0002615;1.02e-07;3!CL:0002579;2.18e-07;3!CL:0002504;3.79e-07;3!CL:1000279;3.79e-07;3!CL:1000280;3.79e-07;3!CL:0000197;9.64e-07;6!CL:0000098;9.64e-07;6!CL:0002167;9.64e-07;6!CL:0002580;9.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.44e-13,23;CL:0000057,3.26e-10,76;CL:0002622,8.57e-08,3;CL:0002615,9.98e-08,3;CL:0002579,2.30e-07,3;CL:0002504,3.80e-07,3;CL:1000279,3.80e-07,3;CL:1000280,3.80e-07,3;CL:0000197,9.65e-07,6;CL:0000098,9.65e-07,6;CL:0002167,9.65e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.44e-08!5;DOID:450!9.44e-08!5;DOID:66!9.44e-08!5;DOID:423!9.44e-08!5;DOID:0080000!9.44e-08!5;DOID:11722!9.44e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.91e-11;5!DOID:450;1.91e-11;5!DOID:66;1.91e-11;5!DOID:423;1.91e-11;5!DOID:0080000;1.91e-11;5!DOID:11722;1.91e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.76e-11,5;DOID:450,1.76e-11,5;DOID:66,1.76e-11,5;DOID:423,1.76e-11,5;DOID:0080000,1.76e-11,5;DOID:11722,1.76e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.72e-09!6;UBERON:0002358!5.72e-09!6;UBERON:0003684!5.72e-09!6;UBERON:0001178!5.72e-09!6;UBERON:0005156!1.64e-07!59;UBERON:0000990!1.64e-07!59;UBERON:0004457!2.07e-07!12;UBERON:0000042!2.07e-07!12;UBERON:0000059!4.81e-07!11;UBERON:0003102!5.34e-07!95;UBERON:0001155!6.76e-07!9;UBERON:0000475!8.61e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.93e-13;6!UBERON:0002358;1.93e-13;6!UBERON:0003684;1.93e-13;6!UBERON:0001178;1.93e-13;6!UBERON:0000160;1.18e-11;17!UBERON:0000059;5.41e-11;11!UBERON:0001155;1.49e-10;9!UBERON:0005409;4.03e-10;22!UBERON:0004457;1.25e-08;9!UBERON:0000042;1.25e-08;9!UBERON:0004921;4.28e-08;33!UBERON:0003937;8.00e-08;12!UBERON:0005399;8.00e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.00e-13,6;UBERON:0002358,2.00e-13,6;UBERON:0003684,2.00e-13,6;UBERON:0001178,2.00e-13,6;UBERON:0000160,9.60e-12,17;UBERON:0000059,4.42e-11,11;UBERON:0001155,1.21e-10,9;UBERON:0001046,3.44e-09,19;UBERON:0005409,1.08e-08,25;UBERON:0000162,1.93e-08,14;UBERON:0001353,1.93e-08,14;UBERON:0000163,1.93e-08,14;UBERON:0006866,1.93e-08,14;UBERON:0000164,1.93e-08,14;UBERON:0000931,1.93e-08,14;UBERON:0003937,7.88e-08,12;UBERON:0005399,7.88e-08,12;UBERON:0004122,8.97e-08,15;UBERON:0003102,1.99e-07,99;UBERON:0002097,3.29e-07,41;UBERON:0005156,3.44e-07,59;UBERON:0000990,3.44e-07,59;UBERON:0002199,4.24e-07,46;UBERON:0002416,4.24e-07,46 | |||
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| ||
|short_description=p1@ENST00000439009 | |||
}} | }} |
Latest revision as of 18:25, 29 July 2015
Short description: | p1@ENST00000439009 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000439009_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | 0bp_to_ENST00000439009_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.44e-13 | 23 |
fibroblast | 3.26e-10 | 76 |
prostate stromal cell | 8.57e-08 | 3 |
adipocyte of omentum tissue | 9.98e-08 | 3 |
omentum preadipocyte | 2.30e-07 | 3 |
enteric smooth muscle cell | 3.80e-07 | 3 |
smooth muscle cell of large intestine | 3.80e-07 | 3 |
smooth muscle cell of colon | 3.80e-07 | 3 |
receptor cell | 9.65e-07 | 6 |
sensory epithelial cell | 9.65e-07 | 6 |
olfactory epithelial cell | 9.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.00e-13 | 6 |
peritoneum | 2.00e-13 | 6 |
abdominal cavity | 2.00e-13 | 6 |
visceral peritoneum | 2.00e-13 | 6 |
intestine | 9.60e-12 | 17 |
large intestine | 4.42e-11 | 11 |
colon | 1.21e-10 | 9 |
hindgut | 3.44e-09 | 19 |
gastrointestinal system | 1.08e-08 | 25 |
cloaca | 1.93e-08 | 14 |
anal region | 1.93e-08 | 14 |
embryonic cloaca | 1.93e-08 | 14 |
terminal part of digestive tract | 1.93e-08 | 14 |
primitive urogenital sinus | 1.93e-08 | 14 |
proctodeum | 1.93e-08 | 14 |
sex gland | 7.88e-08 | 12 |
male reproductive gland | 7.88e-08 | 12 |
genitourinary system | 8.97e-08 | 15 |
surface structure | 1.99e-07 | 99 |
skin of body | 3.29e-07 | 41 |
reproductive structure | 3.44e-07 | 59 |
reproductive system | 3.44e-07 | 59 |
integument | 4.24e-07 | 46 |
integumental system | 4.24e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.76e-11 | 5 |
myotonic disease | 1.76e-11 | 5 |
muscle tissue disease | 1.76e-11 | 5 |
myopathy | 1.76e-11 | 5 |
muscular disease | 1.76e-11 | 5 |
myotonic dystrophy | 1.76e-11 | 5 |