FFCP PHASE1:Hg19::chr3:120401043..120401138,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:120401043..120401138,-
|short_description=p1@HGD
|description=CAGE_peak_1_at_HGD_5end
|association_with_transcript=0bp_to_ENST00000480862,ENST00000488183_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3081 | |EntrezGene=3081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4892 | |HGNC=4892 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000480862,ENST00000488183_5end | |||
|cluster_id=chr3:120401043..120401138,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_HGD_5end | |||
|id=chr3:120401043..120401138,- | |||
|ontology_enrichment_celltype=CL:0000181!1.69e-09!12;CL:0000417!1.69e-09!12;CL:0000668!1.69e-09!12;CL:0000414!1.69e-09!12;CL:0000412!1.69e-09!12;CL:0000182!1.69e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.36e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.40e-14,12;CL:0000223,5.44e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.26e-16;13!UBERON:0003104;7.77e-16;31!UBERON:0004161;2.01e-15;11!UBERON:0001041;3.38e-10;30!UBERON:0006595;7.89e-07;86 | |||
|ontology_enrichment_disease=DOID:299!7.52e-11!25 | |||
|ontology_enrichment_disease_v019=DOID:299;3.44e-14;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,3.03e-14,25;DOID:305,1.92e-10,106;DOID:0050687,9.34e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.81e-34!115;UBERON:0009497!5.57e-12!25;UBERON:0000015!5.57e-12!25;UBERON:0002423!5.57e-12!25;UBERON:0006235!5.57e-12!25;UBERON:0004161!5.57e-12!25;UBERON:0001049!8.97e-12!57;UBERON:0005068!8.97e-12!57;UBERON:0006241!8.97e-12!57;UBERON:0007135!8.97e-12!57;UBERON:0005172!9.36e-12!55;UBERON:0005173!9.36e-12!55;UBERON:0009854!1.94e-11!23;UBERON:0002368!2.54e-11!35;UBERON:0000481!3.10e-11!347;UBERON:0002780!4.18e-11!41;UBERON:0001890!4.18e-11!41;UBERON:0006240!4.18e-11!41;UBERON:0003080!1.10e-10!42;UBERON:0004921!1.42e-10!129;UBERON:0004185!1.42e-10!129;UBERON:0008835!1.46e-10!22;UBERON:0003894!1.46e-10!22;UBERON:0001017!2.90e-10!82;UBERON:0003929!2.98e-10!54;UBERON:0005743!3.41e-10!86;UBERON:0000062!3.90e-10!511;UBERON:0002417!8.72e-10!61;UBERON:0000916!8.72e-10!61;UBERON:0001007!1.02e-09!155;UBERON:0001555!1.02e-09!155;UBERON:0007026!1.02e-09!155;UBERON:0001893!1.28e-09!34;UBERON:0009856!1.41e-09!26;UBERON:0000949!1.76e-09!45;UBERON:0002107!2.14e-09!19;UBERON:0006925!2.14e-09!19;UBERON:0008836!2.14e-09!19;UBERON:0002616!2.58e-09!59;UBERON:0005057!3.39e-09!26;UBERON:0000073!5.17e-09!94;UBERON:0001016!5.17e-09!94;UBERON:0002791!5.17e-09!33;UBERON:0000025!6.80e-09!194;UBERON:0007499!8.87e-09!25;UBERON:0003075!9.03e-09!86;UBERON:0007284!9.03e-09!86;UBERON:0001869!1.67e-08!32;UBERON:0000922!1.97e-08!612;UBERON:0004119!3.13e-08!169;UBERON:0000925!3.13e-08!169;UBERON:0006595!3.13e-08!169;UBERON:0005409!3.51e-08!35;UBERON:0002530!3.65e-08!59;UBERON:0000955!4.14e-08!69;UBERON:0006238!4.14e-08!69;UBERON:0005177!5.15e-08!107;UBERON:0002346!5.57e-08!90;UBERON:0004111!5.92e-08!241;UBERON:0002020!1.13e-07!34;UBERON:0003528!1.13e-07!34;UBERON:0000077!1.14e-07!130;UBERON:0000956!1.52e-07!25;UBERON:0000203!1.52e-07!25;UBERON:0005911!1.93e-07!82;UBERON:0002050!3.12e-07!605;UBERON:0005423!3.12e-07!605;UBERON:0001041!5.53e-07!98;UBERON:0000468!6.10e-07!659;UBERON:0000923!7.01e-07!604;UBERON:0005291!7.01e-07!604;UBERON:0006598!7.01e-07!604;UBERON:0002532!7.01e-07!604;UBERON:0003056!7.46e-07!61;UBERON:0000477!9.61e-07!286;UBERON:0000160!9.76e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.09e-16;25!UBERON:0005409;1.61e-15;22!UBERON:0002107;3.97e-13;19!UBERON:0006925;3.97e-13;19!UBERON:0000160;3.47e-12;17!UBERON:0002368;2.84e-11;33!UBERON:0004921;8.41e-10;33!UBERON:0004175;2.25e-09;21!UBERON:0005172;3.23e-09;52!UBERON:0005173;3.23e-09;52!UBERON:0002365;2.00e-08;31!UBERON:0002330;2.00e-08;31!UBERON:0006947;1.26e-07;3!UBERON:0004054;1.26e-07;3!UBERON:0000059;1.52e-07;11!UBERON:0000949;1.57e-07;43!UBERON:0002417;3.28e-07;58!UBERON:0000916;3.28e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.40e-17,54;UBERON:0005173,1.40e-17,54;UBERON:0009497,4.10e-16,25;UBERON:0000015,4.10e-16,25;UBERON:0002423,4.10e-16,25;UBERON:0006235,4.10e-16,25;UBERON:0004161,4.10e-16,25;UBERON:0002417,3.28e-15,60;UBERON:0000916,3.28e-15,60;UBERON:0003929,6.56e-15,54;UBERON:0009854,7.31e-15,23;UBERON:0001007,3.43e-14,145;UBERON:0001555,3.43e-14,145;UBERON:0007026,3.43e-14,145;UBERON:0004921,1.36e-13,118;UBERON:0008835,2.07e-13,22;UBERON:0003894,2.07e-13,22;UBERON:0005409,2.30e-13,25;UBERON:0002107,4.00e-13,19;UBERON:0006925,4.00e-13,19;UBERON:0008836,4.00e-13,19;UBERON:0009856,8.64e-13,26;UBERON:0005177,2.60e-12,101;UBERON:0005911,3.47e-12,82;UBERON:0000160,3.68e-12,17;UBERON:0004119,5.68e-12,160;UBERON:0000925,5.68e-12,160;UBERON:0006595,5.68e-12,160;UBERON:0002368,6.84e-12,35;UBERON:0007499,1.81e-11,25;UBERON:0002530,6.34e-10,59;UBERON:0000949,7.65e-10,45;UBERON:0009569,1.93e-09,112;UBERON:0002365,1.51e-08,31;UBERON:0002330,1.51e-08,31;UBERON:0006947,1.15e-07,3;UBERON:0004054,1.15e-07,3;UBERON:0004175,1.40e-07,25;UBERON:0000059,1.61e-07,11;UBERON:0007023,1.94e-07,114;UBERON:0011216,2.16e-07,223;UBERON:0002113,2.78e-07,26;UBERON:0003918,2.78e-07,26;UBERON:0011143,2.78e-07,26;UBERON:0005095,2.78e-07,26;UBERON:0007687,2.78e-07,26;UBERON:0001041,6.67e-07,87 | |||
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| ||
|short_description=p1@HGD | |||
}} | }} |
Latest revision as of 22:17, 19 September 2015
Short description: | p1@HGD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HGD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000480862, ENST00000488183_5end |
EntrezGene: | HGD |
HGNC: | 4892 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.40e-14 | 12 |
endodermal cell | 5.44e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.03e-14 | 25 |
carcinoma | 1.92e-10 | 106 |
cell type cancer | 9.34e-07 | 143 |