FFCP PHASE1:Hg19::chr2:114002042..114002053,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:114002042..114002053,-
|short_description=p@chr2:114002042..114002053,-
|description=CAGE_peak_at_chr2:114002042..114002053,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:114002042..114002053,- | |||
|coexpression_cluster_id=C1493 | |||
|description=CAGE_peak_at_chr2:114002042..114002053,- | |||
|id=chr2:114002042..114002053,- | |||
|ontology_enrichment_celltype=CL:1000497!1.47e-24!18;CL:0002518!1.47e-24!18;CL:1000507!5.88e-20!12;CL:1000494!5.88e-20!12;CL:1000449!1.55e-18!16;CL:0002149!1.96e-17!6;CL:0002255!1.96e-17!6;CL:0002681!4.06e-14!13;CL:0002584!4.06e-14!13;CL:0000239!7.50e-13!3;CL:1000615!7.50e-13!3;CL:0002306!7.50e-13!3;CL:0000159!1.67e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.14e-26;17!CL:0002518;2.14e-26;17!CL:0000239;2.89e-22;3!CL:1000615;2.89e-22;3!CL:0002306;2.89e-22;3!CL:0002149;9.26e-21;6!CL:0002255;9.26e-21;6!CL:1000507;3.73e-18;10!CL:1000494;3.73e-18;10!CL:1000449;4.77e-17;15!CL:0000159;2.73e-16;2!CL:0002681;6.27e-15;12!CL:0002584;6.27e-15;12!CL:0000313;4.02e-09;1!CL:0000319;6.90e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.42e-26,17;CL:0002518,2.42e-26,17;CL:0000239,1.86e-22,3;CL:1000615,1.86e-22,3;CL:0002306,1.86e-22,3;CL:0002149,8.39e-21,6;CL:0002255,8.39e-21,6;CL:1000507,3.35e-18,10;CL:1000494,3.35e-18,10;CL:1000449,4.51e-17,15;CL:0000159,2.95e-16,2;CL:0002681,5.74e-15,12;CL:0002584,5.74e-15,12;CL:0000313,3.87e-09,1;CL:0000319,7.75e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.12e-24;5!UBERON:0007297;1.93e-15;2!UBERON:0005795;1.56e-12;10!UBERON:0003918;5.03e-12;10!UBERON:0007687;5.03e-12;10!UBERON:0005754;1.42e-08;1 | |||
|ontology_enrichment_disease=DOID:120!4.98e-26!27;DOID:193!5.28e-24!29;DOID:3001!1.96e-17!6;DOID:299!1.20e-14!25;DOID:4468!1.36e-09!2;DOID:2394!1.96e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3001;9.26e-21;6!DOID:299;1.54e-18;25!DOID:120;5.40e-17;27!DOID:4468;2.09e-16;2!DOID:193;9.55e-16;29!DOID:2152;4.02e-09;1!DOID:3030;6.90e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,8.39e-21,6;DOID:299,1.49e-18,25;DOID:120,5.65e-17,27;DOID:4468,2.01e-16,2;DOID:193,9.96e-16,29;DOID:2152,3.87e-09,1;DOID:3030,7.75e-09,1;DOID:305,9.54e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002113!9.55e-30!27;UBERON:0003918!9.55e-30!27;UBERON:0005095!9.55e-30!27;UBERON:0007687!9.55e-30!27;UBERON:0000489!6.82e-28!32;UBERON:0000080!1.47e-24!18;UBERON:0002120!1.47e-24!18;UBERON:0004875!1.47e-24!18;UBERON:0005721!1.47e-24!18;UBERON:0005754!1.47e-24!18;UBERON:0007297!1.47e-24!18;UBERON:0004876!7.24e-22!20;UBERON:0006555!1.71e-21!17;UBERON:0005103!1.71e-21!17;UBERON:0000083!1.71e-21!17;UBERON:0009201!1.71e-21!17;UBERON:0004819!1.71e-21!17;UBERON:0006553!1.71e-21!17;UBERON:0003074!1.71e-21!17;UBERON:0003060!1.71e-21!17;UBERON:0003887!1.03e-20!21;UBERON:0009773!5.88e-20!12;UBERON:0001231!5.88e-20!12;UBERON:0004810!5.88e-20!12;UBERON:0000058!2.09e-19!26;UBERON:0004211!1.55e-18!16;UBERON:0001285!1.55e-18!16;UBERON:0007684!1.55e-18!16;UBERON:0003220!1.55e-18!16;UBERON:0004208!1.55e-18!16;UBERON:0006554!7.29e-17!44;UBERON:0001008!2.07e-16!45;UBERON:0003886!1.05e-15!63;UBERON:0003133!5.40e-15!48;UBERON:0004175!3.94e-14!25;UBERON:0001225!4.06e-14!13;UBERON:0008987!4.06e-14!13;UBERON:0002553!1.04e-13!70;UBERON:0002046!1.13e-13!5;UBERON:0004117!1.13e-13!5;UBERON:0007689!1.13e-13!5;UBERON:0007123!1.13e-13!5;UBERON:0003091!1.13e-13!5;UBERON:0006853!7.50e-13!3;UBERON:0007685!7.50e-13!3;UBERON:0004134!7.50e-13!3;UBERON:0005172!8.62e-13!55;UBERON:0005173!8.62e-13!55;UBERON:0006947!1.31e-12!3;UBERON:0004054!1.31e-12!3;UBERON:0005156!1.48e-11!59;UBERON:0000990!1.48e-11!59;UBERON:0001851!2.78e-11!16;UBERON:0002417!3.39e-11!61;UBERON:0000916!3.39e-11!61;UBERON:0003103!6.67e-11!69;UBERON:0003134!9.15e-11!37;UBERON:0000474!9.15e-11!37;UBERON:0003064!9.34e-11!37;UBERON:0000353!1.47e-10!17;UBERON:0005795!2.34e-10!22;UBERON:0005904!1.44e-09!4;UBERON:0003100!1.70e-09!41;UBERON:0000341!4.25e-09!2;UBERON:0000995!1.73e-08!21;UBERON:0003975!4.68e-08!22;UBERON:0000464!6.81e-08!104;UBERON:0005177!1.24e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.12e-24;5!UBERON:0002113;2.44e-23;24!UBERON:0011143;2.44e-23;24!UBERON:0006853;2.89e-22;3!UBERON:0007685;2.89e-22;3!UBERON:0004134;2.89e-22;3!UBERON:0000489;4.34e-19;29!UBERON:0006554;2.08e-18;30!UBERON:0001008;2.08e-18;30!UBERON:0004211;3.73e-18;10!UBERON:0009773;3.73e-18;10!UBERON:0001231;3.73e-18;10!UBERON:0004810;3.73e-18;10!UBERON:0006555;4.77e-17;15!UBERON:0004819;4.77e-17;15!UBERON:0001285;4.77e-17;15!UBERON:0007684;4.77e-17;15!UBERON:0000341;1.93e-15;2!UBERON:0001225;6.27e-15;12!UBERON:0008987;6.27e-15;12!UBERON:0004175;1.91e-12;21!UBERON:0001851;6.44e-12;15!UBERON:0000353;6.44e-12;15!UBERON:0006947;1.32e-10;3!UBERON:0004054;1.32e-10;3!UBERON:0004911;4.02e-09;1!UBERON:0000998;1.42e-08;1!UBERON:0001301;1.42e-08;1!UBERON:0006868;1.42e-08;1!UBERON:0005904;3.59e-08;4!UBERON:0005172;8.02e-08;52!UBERON:0005173;8.02e-08;52!UBERON:0000995;2.03e-07;17!UBERON:0003975;5.21e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.12e-32,26;UBERON:0003918,5.12e-32,26;UBERON:0011143,5.12e-32,26;UBERON:0005095,5.12e-32,26;UBERON:0007687,5.12e-32,26;UBERON:0000489,1.47e-26,31;UBERON:0002046,2.62e-24,5;UBERON:0004117,2.62e-24,5;UBERON:0007689,2.62e-24,5;UBERON:0007123,2.62e-24,5;UBERON:0003091,2.62e-24,5;UBERON:0006853,1.86e-22,3;UBERON:0007685,1.86e-22,3;UBERON:0004134,1.86e-22,3;UBERON:0006555,1.51e-21,16;UBERON:0004819,1.51e-21,16;UBERON:0004810,3.35e-18,10;UBERON:0004211,4.51e-17,15;UBERON:0009773,4.51e-17,15;UBERON:0001231,4.51e-17,15;UBERON:0001285,4.51e-17,15;UBERON:0007684,4.51e-17,15;UBERON:0004208,4.51e-17,15;UBERON:0006554,6.85e-17,47;UBERON:0001008,1.68e-16,48;UBERON:0000341,1.66e-15,2;UBERON:0001225,5.74e-15,12;UBERON:0008987,5.74e-15,12;UBERON:0005172,1.85e-14,54;UBERON:0005173,1.85e-14,54;UBERON:0000080,4.35e-13,9;UBERON:0002120,4.35e-13,9;UBERON:0004875,4.35e-13,9;UBERON:0005721,4.35e-13,9;UBERON:0005754,4.35e-13,9;UBERON:0007297,4.35e-13,9;UBERON:0002417,7.93e-13,60;UBERON:0000916,7.93e-13,60;UBERON:0001851,6.00e-12,15;UBERON:0000353,6.00e-12,15;UBERON:0009722,3.65e-11,11;UBERON:0007690,3.65e-11,11;UBERON:0003103,4.24e-11,68;UBERON:0004876,9.62e-11,11;UBERON:0006947,1.08e-10,3;UBERON:0004054,1.08e-10,3;UBERON:0004175,2.04e-10,25;UBERON:0003887,7.32e-10,12;UBERON:0004911,3.87e-09,1;UBERON:0005103,1.12e-08,8;UBERON:0000083,1.12e-08,8;UBERON:0009201,1.12e-08,8;UBERON:0006553,1.12e-08,8;UBERON:0003074,1.12e-08,8;UBERON:0003060,1.12e-08,8;UBERON:0000998,1.13e-08,1;UBERON:0006868,1.13e-08,1;UBERON:0001301,1.32e-08,1;UBERON:0005904,3.10e-08,4;UBERON:0003133,6.10e-07,48;UBERON:0005177,7.17e-07,101;UBERON:0008814,7.25e-07,18 | |||
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|short_description=p@chr2:114002042..114002053,- | |||
}} | }} |
Latest revision as of 23:38, 28 July 2015
Short description: | p@chr2:114002042..114002053, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:114002042..114002053, - |
Coexpression cluster: | C1493_clear_thyroid_endometrioid_serous_throat_anaplastic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.42e-26 | 17 |
kidney epithelial cell | 2.42e-26 | 17 |
brush border epithelial cell | 1.86e-22 | 3 |
kidney cortex tubule cell | 1.86e-22 | 3 |
epithelial cell of proximal tubule | 1.86e-22 | 3 |
epithelial cell of uterus | 8.39e-21 | 6 |
stromal cell of endometrium | 8.39e-21 | 6 |
kidney tubule cell | 3.35e-18 | 10 |
nephron tubule epithelial cell | 3.35e-18 | 10 |
epithelial cell of nephron | 4.51e-17 | 15 |
seromucus secreting cell | 2.95e-16 | 2 |
kidney cortical cell | 5.74e-15 | 12 |
renal cortical epithelial cell | 5.74e-15 | 12 |
serous secreting cell | 3.87e-09 | 1 |
mucus secreting cell | 7.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 8.39e-21 | 6 |
adenocarcinoma | 1.49e-18 | 25 |
female reproductive organ cancer | 5.65e-17 | 27 |
clear cell adenocarcinoma | 2.01e-16 | 2 |
reproductive organ cancer | 9.96e-16 | 29 |
ovary epithelial cancer | 3.87e-09 | 1 |
mucinous adenocarcinoma | 7.75e-09 | 1 |
carcinoma | 9.54e-07 | 106 |