FFCP PHASE1:Hg19::chr22:30653574..30653606,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:30653574..30653606,-
|short_description=p@chr22:30653574..30653606,-
|description=CAGE_peak_at_chr22:30653574..30653606,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:30653574..30653606,- | |||
|coexpression_cluster_id=C524 | |||
|description=CAGE_peak_at_chr22:30653574..30653606,- | |||
|id=chr22:30653574..30653606,- | |||
|ontology_enrichment_celltype=CL:1000497!5.08e-17!18;CL:0002518!5.08e-17!18;CL:1000449!1.61e-13!16;CL:0000066!2.92e-13!254;CL:1000507!3.66e-12!12;CL:1000494!3.66e-12!12;CL:0002149!1.71e-10!6;CL:0002255!1.71e-10!6;CL:0002681!2.19e-08!13;CL:0002584!2.19e-08!13;CL:0002274!1.53e-07!5;CL:0000457!1.53e-07!5;CL:0002191!1.53e-07!5;CL:0000097!1.53e-07!5;CL:0000831!1.53e-07!5;CL:0002028!1.53e-07!5;CL:0000322!2.22e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;7.42e-35;17!CL:0002518;7.42e-35;17!CL:1000449;1.05e-32;15!CL:1000507;2.42e-32;10!CL:1000494;2.42e-32;10!CL:0002681;1.85e-20;12!CL:0002584;1.85e-20;12!CL:0002149;1.20e-14;6!CL:0002255;1.20e-14;6!CL:0000239;8.91e-08;3!CL:1000615;8.91e-08;3!CL:0002306;8.91e-08;3!CL:1000746;4.55e-07;7!CL:1000612;4.55e-07;7!CL:0000313;7.35e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,9.73e-35,17;CL:0002518,9.73e-35,17;CL:1000449,1.25e-32,15;CL:1000507,2.06e-32,10;CL:1000494,2.06e-32,10;CL:0002681,2.73e-20,12;CL:0002584,2.73e-20,12;CL:0002149,9.42e-15,6;CL:0002255,9.42e-15,6;CL:0000066,3.10e-11,253;CL:0000239,9.08e-08,3;CL:1000615,9.08e-08,3;CL:0002306,9.08e-08,3;CL:1000746,5.81e-07,7;CL:1000612,5.81e-07,7;CL:0000313,6.96e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.30e-19!106;DOID:0050687!1.96e-17!143;DOID:299!1.30e-11!25;DOID:3001!1.71e-10!6;DOID:162!7.81e-10!235;DOID:14566!2.20e-09!239;DOID:3908!5.30e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:299;4.52e-16;25!DOID:3001;1.20e-14;6!DOID:4468;6.06e-12;2!DOID:3908;5.69e-10;5!DOID:120;5.98e-09;27!DOID:193;2.88e-08;29!DOID:4556;7.13e-08;3!DOID:2152;7.35e-07;1!DOID:3111;9.66e-07;1!DOID:3603;9.66e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,4.07e-16,25;DOID:3001,9.42e-15,6;DOID:305,4.34e-12,106;DOID:4468,6.76e-12,2;DOID:0050687,3.58e-10,143;DOID:3908,5.12e-10,5;DOID:120,5.55e-09,27;DOID:193,2.69e-08,29;DOID:4556,6.89e-08,3;DOID:2152,6.96e-07,1;DOID:3111,9.67e-07,1;DOID:3603,9.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.29e-18!27;UBERON:0003918!1.29e-18!27;UBERON:0005095!1.29e-18!27;UBERON:0007687!1.29e-18!27;UBERON:0000058!3.07e-17!26;UBERON:0000489!3.87e-17!32;UBERON:0006554!8.47e-16!44;UBERON:0001008!2.53e-15!45;UBERON:0004211!1.61e-13!16;UBERON:0001285!1.61e-13!16;UBERON:0007684!1.61e-13!16;UBERON:0003220!1.61e-13!16;UBERON:0004208!1.61e-13!16;UBERON:0006555!1.40e-12!17;UBERON:0005103!1.40e-12!17;UBERON:0000083!1.40e-12!17;UBERON:0009201!1.40e-12!17;UBERON:0004819!1.40e-12!17;UBERON:0006553!1.40e-12!17;UBERON:0003074!1.40e-12!17;UBERON:0003060!1.40e-12!17;UBERON:0005177!2.09e-12!107;UBERON:0009773!3.66e-12!12;UBERON:0001231!3.66e-12!12;UBERON:0004810!3.66e-12!12;UBERON:0000080!9.53e-12!18;UBERON:0002120!9.53e-12!18;UBERON:0004875!9.53e-12!18;UBERON:0005721!9.53e-12!18;UBERON:0005754!9.53e-12!18;UBERON:0007297!9.53e-12!18;UBERON:0004876!2.47e-10!20;UBERON:0003886!6.21e-10!63;UBERON:0003887!9.95e-10!21;UBERON:0000466!2.17e-09!126;UBERON:0000464!3.40e-09!104;UBERON:0005172!3.61e-09!55;UBERON:0005173!3.61e-09!55;UBERON:0003064!4.06e-09!37;UBERON:0002553!2.02e-08!70;UBERON:0001225!2.19e-08!13;UBERON:0008987!2.19e-08!13;UBERON:0002417!8.00e-08!61;UBERON:0000916!8.00e-08!61;UBERON:0004821!2.22e-07!3;UBERON:0003215!2.22e-07!3;UBERON:0002299!2.22e-07!3;UBERON:0006524!2.22e-07!3;UBERON:0008874!2.22e-07!3;UBERON:0002169!2.22e-07!3;UBERON:0004894!2.22e-07!3;UBERON:0000926!7.72e-07!448;UBERON:0004120!7.72e-07!448;UBERON:0006603!7.72e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.05e-32;15!UBERON:0004819;1.05e-32;15!UBERON:0001285;1.05e-32;15!UBERON:0007684;1.05e-32;15!UBERON:0004211;2.42e-32;10!UBERON:0009773;2.42e-32;10!UBERON:0001231;2.42e-32;10!UBERON:0004810;2.42e-32;10!UBERON:0002113;9.25e-29;24!UBERON:0011143;9.25e-29;24!UBERON:0000489;1.84e-27;29!UBERON:0006554;1.87e-26;30!UBERON:0001008;1.87e-26;30!UBERON:0001225;1.85e-20;12!UBERON:0008987;1.85e-20;12!UBERON:0001851;3.44e-16;15!UBERON:0000353;3.44e-16;15!UBERON:0002075;1.39e-09;18!UBERON:0005172;2.22e-09;52!UBERON:0005173;2.22e-09;52!UBERON:0005177;3.14e-09;99!UBERON:0002417;3.63e-09;58!UBERON:0000916;3.63e-09;58!UBERON:0001264;2.52e-08;10!UBERON:0006853;8.91e-08;3!UBERON:0007685;8.91e-08;3!UBERON:0004134;8.91e-08;3!UBERON:0002100;4.02e-07;122!UBERON:0003103;4.29e-07;61!UBERON:0000074;4.55e-07;7!UBERON:0001229;4.55e-07;7!UBERON:0004913;6.58e-07;1!UBERON:0003703;6.58e-07;1!UBERON:0001174;6.58e-07;1!UBERON:0004914;6.58e-07;1!UBERON:0004911;7.35e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.25e-32,15;UBERON:0009773,1.25e-32,15;UBERON:0001231,1.25e-32,15;UBERON:0001285,1.25e-32,15;UBERON:0007684,1.25e-32,15;UBERON:0004208,1.25e-32,15;UBERON:0004810,2.06e-32,10;UBERON:0006555,1.78e-30,16;UBERON:0004819,1.78e-30,16;UBERON:0002113,2.72e-26,26;UBERON:0003918,2.72e-26,26;UBERON:0011143,2.72e-26,26;UBERON:0005095,2.72e-26,26;UBERON:0007687,2.72e-26,26;UBERON:0000489,2.00e-25,31;UBERON:0001225,2.73e-20,12;UBERON:0008987,2.73e-20,12;UBERON:0005177,1.02e-19,101;UBERON:0001851,4.68e-16,15;UBERON:0000353,4.68e-16,15;UBERON:0006554,7.60e-16,47;UBERON:0001008,1.85e-15,48;UBERON:0005172,1.98e-13,54;UBERON:0005173,1.98e-13,54;UBERON:0002417,8.06e-12,60;UBERON:0000916,8.06e-12,60;UBERON:0003103,3.93e-10,68;UBERON:0002075,1.17e-09,18;UBERON:0009569,1.51e-09,112;UBERON:0003886,2.35e-09,54;UBERON:0002100,1.20e-08,199;UBERON:0001264,1.70e-08,10;UBERON:0002553,4.76e-08,61;UBERON:0006853,9.08e-08,3;UBERON:0007685,9.08e-08,3;UBERON:0004134,9.08e-08,3;UBERON:0010532,5.81e-07,7;UBERON:0000074,5.81e-07,7;UBERON:0001229,5.81e-07,7;UBERON:0001230,5.81e-07,7;UBERON:0003220,5.81e-07,7;UBERON:0005749,5.81e-07,7;UBERON:0004199,5.81e-07,7;UBERON:0004209,5.81e-07,7;UBERON:0004198,5.81e-07,7;UBERON:0004913,6.59e-07,1;UBERON:0003703,6.59e-07,1;UBERON:0001174,6.59e-07,1;UBERON:0004914,6.59e-07,1;UBERON:0004911,6.96e-07,1 | |||
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|short_description=p@chr22:30653574..30653606,- | |||
}} | }} |
Latest revision as of 20:05, 28 July 2015
Short description: | p@chr22:30653574..30653606, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:30653574..30653606, - |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 9.73e-35 | 17 |
kidney epithelial cell | 9.73e-35 | 17 |
epithelial cell of nephron | 1.25e-32 | 15 |
kidney tubule cell | 2.06e-32 | 10 |
nephron tubule epithelial cell | 2.06e-32 | 10 |
kidney cortical cell | 2.73e-20 | 12 |
renal cortical epithelial cell | 2.73e-20 | 12 |
epithelial cell of uterus | 9.42e-15 | 6 |
stromal cell of endometrium | 9.42e-15 | 6 |
epithelial cell | 3.10e-11 | 253 |
brush border epithelial cell | 9.08e-08 | 3 |
kidney cortex tubule cell | 9.08e-08 | 3 |
epithelial cell of proximal tubule | 9.08e-08 | 3 |
glomerular cell | 5.81e-07 | 7 |
kidney corpuscule cell | 5.81e-07 | 7 |
serous secreting cell | 6.96e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.07e-16 | 25 |
female reproductive endometrioid cancer | 9.42e-15 | 6 |
carcinoma | 4.34e-12 | 106 |
clear cell adenocarcinoma | 6.76e-12 | 2 |
cell type cancer | 3.58e-10 | 143 |
non-small cell lung carcinoma | 5.12e-10 | 5 |
female reproductive organ cancer | 5.55e-09 | 27 |
reproductive organ cancer | 2.69e-08 | 29 |
lung large cell carcinoma | 6.89e-08 | 3 |
ovary epithelial cancer | 6.96e-07 | 1 |
cystadenocarcinoma | 9.67e-07 | 1 |
mucinous cystadenocarcinoma | 9.67e-07 | 1 |