FFCP PHASE1:Hg19::chr11:17035519..17035539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=8385 | |HGNC=8385 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000530490_5end | |association_with_transcript=-5bp_to_ENST00000530490_5end | ||
|cluster_id=chr11:17035519..17035539,+ | |||
|description=CAGE_peak_1_at_OR7E14P_5end | |description=CAGE_peak_1_at_OR7E14P_5end | ||
|id=chr11:17035519..17035539,+ | |id=chr11:17035519..17035539,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.05e-17!254;CL:1000449!1.49e-09!16;CL:1000497!1.02e-08!18;CL:0002518!1.02e-08!18;CL:1000507!1.68e-07!12;CL:1000494!1.68e-07!12;CL:0002681!3.50e-07!13;CL:0002584!3.50e-07!13 | |ontology_enrichment_celltype=CL:0000066!8.05e-17!254;CL:1000449!1.49e-09!16;CL:1000497!1.02e-08!18;CL:0002518!1.02e-08!18;CL:1000507!1.68e-07!12;CL:1000494!1.68e-07!12;CL:0002681!3.50e-07!13;CL:0002584!3.50e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.10e-16;15!CL:1000507;1.62e-16;10!CL:1000494;1.62e-16;10!CL:1000497;3.00e-14;17!CL:0002518;3.00e-14;17!CL:0002681;2.57e-12;12!CL:0002584;2.57e-12;12!CL:0000182;1.45e-07;12 | |ontology_enrichment_celltype_v019=CL:1000449;1.10e-16;15!CL:1000507;1.62e-16;10!CL:1000494;1.62e-16;10!CL:1000497;3.00e-14;17!CL:0002518;3.00e-14;17!CL:0002681;2.57e-12;12!CL:0002584;2.57e-12;12!CL:0000182;1.45e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.34e-16,15;CL:1000507,1.66e-16,10;CL:1000494,1.66e-16,10;CL:1000497,3.55e-14,17;CL:0002518,3.55e-14,17;CL:0000066,6.62e-14,253;CL:0002681,3.00e-12,12;CL:0002584,3.00e-12,12;CL:0000182,1.34e-07,12;CL:0000223,2.11e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.11e-08;13 | |ontology_enrichment_development_v019=UBERON:0009497;1.11e-08;13 | ||
|ontology_enrichment_disease=DOID:305!1.30e-22!106;DOID:0050687!1.22e-16!143;DOID:299!1.24e-08!25 | |ontology_enrichment_disease=DOID:305!1.30e-22!106;DOID:0050687!1.22e-16!143;DOID:299!1.24e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;2.87e-09;25!DOID:5093;3.47e-07;4!DOID:1612;3.47e-07;4 | |ontology_enrichment_disease_v019=DOID:299;2.87e-09;25!DOID:5093;3.47e-07;4!DOID:1612;3.47e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.01e-14,106;DOID:0050687,1.16e-09,143;DOID:299,2.77e-09,25;DOID:5093,3.64e-07,4;DOID:1612,3.64e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005177!2.52e-15!107;UBERON:0004921!1.04e-14!129;UBERON:0004185!1.04e-14!129;UBERON:0004119!3.94e-13!169;UBERON:0000925!3.94e-13!169;UBERON:0006595!3.94e-13!169;UBERON:0000489!4.64e-13!32;UBERON:0000077!6.60e-13!130;UBERON:0001007!7.21e-13!155;UBERON:0001555!7.21e-13!155;UBERON:0007026!7.21e-13!155;UBERON:0001008!7.73e-13!45;UBERON:0006554!3.38e-12!44;UBERON:0000466!3.89e-12!126;UBERON:0000481!1.47e-11!347;UBERON:0005172!1.94e-11!55;UBERON:0005173!1.94e-11!55;UBERON:0002113!3.30e-11!27;UBERON:0003918!3.30e-11!27;UBERON:0005095!3.30e-11!27;UBERON:0007687!3.30e-11!27;UBERON:0000058!5.66e-11!26;UBERON:0007023!8.71e-11!115;UBERON:0001041!1.34e-10!98;UBERON:0000080!1.38e-10!18;UBERON:0002120!1.38e-10!18;UBERON:0004875!1.38e-10!18;UBERON:0005721!1.38e-10!18;UBERON:0005754!1.38e-10!18;UBERON:0007297!1.38e-10!18;UBERON:0006555!4.25e-10!17;UBERON:0005103!4.25e-10!17;UBERON:0000083!4.25e-10!17;UBERON:0009201!4.25e-10!17;UBERON:0004819!4.25e-10!17;UBERON:0006553!4.25e-10!17;UBERON:0003074!4.25e-10!17;UBERON:0003060!4.25e-10!17;UBERON:0003064!5.84e-10!37;UBERON:0009569!6.04e-10!113;UBERON:0000464!1.28e-09!104;UBERON:0004211!1.49e-09!16;UBERON:0001285!1.49e-09!16;UBERON:0007684!1.49e-09!16;UBERON:0003220!1.49e-09!16;UBERON:0004208!1.49e-09!16;UBERON:0005911!4.35e-09!82;UBERON:0000477!4.73e-09!286;UBERON:0002417!5.51e-09!61;UBERON:0000916!5.51e-09!61;UBERON:0004876!7.42e-09!20;UBERON:0003887!7.68e-09!21;UBERON:0000063!5.39e-08!97;UBERON:0001048!1.54e-07!168;UBERON:0009773!1.68e-07!12;UBERON:0001231!1.68e-07!12;UBERON:0004810!1.68e-07!12;UBERON:0000065!1.85e-07!53;UBERON:0003104!1.97e-07!238;UBERON:0009142!1.97e-07!238;UBERON:0001225!3.50e-07!13;UBERON:0008987!3.50e-07!13;UBERON:0004111!3.81e-07!241;UBERON:0000064!5.18e-07!219;UBERON:0002553!6.82e-07!70;UBERON:0001851!6.84e-07!16;UBERON:0008947!6.99e-07!38;UBERON:0003258!6.99e-07!38 | |ontology_enrichment_uberon=UBERON:0005177!2.52e-15!107;UBERON:0004921!1.04e-14!129;UBERON:0004185!1.04e-14!129;UBERON:0004119!3.94e-13!169;UBERON:0000925!3.94e-13!169;UBERON:0006595!3.94e-13!169;UBERON:0000489!4.64e-13!32;UBERON:0000077!6.60e-13!130;UBERON:0001007!7.21e-13!155;UBERON:0001555!7.21e-13!155;UBERON:0007026!7.21e-13!155;UBERON:0001008!7.73e-13!45;UBERON:0006554!3.38e-12!44;UBERON:0000466!3.89e-12!126;UBERON:0000481!1.47e-11!347;UBERON:0005172!1.94e-11!55;UBERON:0005173!1.94e-11!55;UBERON:0002113!3.30e-11!27;UBERON:0003918!3.30e-11!27;UBERON:0005095!3.30e-11!27;UBERON:0007687!3.30e-11!27;UBERON:0000058!5.66e-11!26;UBERON:0007023!8.71e-11!115;UBERON:0001041!1.34e-10!98;UBERON:0000080!1.38e-10!18;UBERON:0002120!1.38e-10!18;UBERON:0004875!1.38e-10!18;UBERON:0005721!1.38e-10!18;UBERON:0005754!1.38e-10!18;UBERON:0007297!1.38e-10!18;UBERON:0006555!4.25e-10!17;UBERON:0005103!4.25e-10!17;UBERON:0000083!4.25e-10!17;UBERON:0009201!4.25e-10!17;UBERON:0004819!4.25e-10!17;UBERON:0006553!4.25e-10!17;UBERON:0003074!4.25e-10!17;UBERON:0003060!4.25e-10!17;UBERON:0003064!5.84e-10!37;UBERON:0009569!6.04e-10!113;UBERON:0000464!1.28e-09!104;UBERON:0004211!1.49e-09!16;UBERON:0001285!1.49e-09!16;UBERON:0007684!1.49e-09!16;UBERON:0003220!1.49e-09!16;UBERON:0004208!1.49e-09!16;UBERON:0005911!4.35e-09!82;UBERON:0000477!4.73e-09!286;UBERON:0002417!5.51e-09!61;UBERON:0000916!5.51e-09!61;UBERON:0004876!7.42e-09!20;UBERON:0003887!7.68e-09!21;UBERON:0000063!5.39e-08!97;UBERON:0001048!1.54e-07!168;UBERON:0009773!1.68e-07!12;UBERON:0001231!1.68e-07!12;UBERON:0004810!1.68e-07!12;UBERON:0000065!1.85e-07!53;UBERON:0003104!1.97e-07!238;UBERON:0009142!1.97e-07!238;UBERON:0001225!3.50e-07!13;UBERON:0008987!3.50e-07!13;UBERON:0004111!3.81e-07!241;UBERON:0000064!5.18e-07!219;UBERON:0002553!6.82e-07!70;UBERON:0001851!6.84e-07!16;UBERON:0008947!6.99e-07!38;UBERON:0003258!6.99e-07!38 | ||
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| ||
|short_description=p1@OR7E14P | |short_description=p1@OR7E14P | ||
}} | }} |
Latest revision as of 23:45, 16 September 2015
Short description: | p1@OR7E14P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OR7E14P_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000530490_5end |
EntrezGene: | NA |
HGNC: | 8385 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.34e-16 | 15 |
kidney tubule cell | 1.66e-16 | 10 |
nephron tubule epithelial cell | 1.66e-16 | 10 |
kidney cell | 3.55e-14 | 17 |
kidney epithelial cell | 3.55e-14 | 17 |
epithelial cell | 6.62e-14 | 253 |
kidney cortical cell | 3.00e-12 | 12 |
renal cortical epithelial cell | 3.00e-12 | 12 |
hepatocyte | 1.34e-07 | 12 |
endodermal cell | 2.11e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.01e-14 | 106 |
cell type cancer | 1.16e-09 | 143 |
adenocarcinoma | 2.77e-09 | 25 |
thoracic cancer | 3.64e-07 | 4 |
breast cancer | 3.64e-07 | 4 |