FFCP PHASE1:Hg19::chr4:13546632..13546662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=579 | |EntrezGene=579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=951 | |HGNC=951 | ||
|TSSclassifier=strong | |||
|UniProt=P78367 | |UniProt=P78367 | ||
|association_with_transcript=11bp_to_ENST00000382438_5end | |association_with_transcript=11bp_to_ENST00000382438_5end | ||
|cluster_id=chr4:13546632..13546662,- | |||
|description=CAGE_peak_1_at_NKX3-2_5end | |description=CAGE_peak_1_at_NKX3-2_5end | ||
|id=chr4:13546632..13546662,- | |id=chr4:13546632..13546662,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;2.55e-23;3!CL:0002602;1.22e-16;2!CL:0002579;7.66e-11;3!CL:0002504;1.19e-10;3!CL:1000279;1.19e-10;3!CL:1000280;1.19e-10;3 | |ontology_enrichment_celltype_v019=CL:0002564;2.55e-23;3!CL:0002602;1.22e-16;2!CL:0002579;7.66e-11;3!CL:0002504;1.19e-10;3!CL:1000279;1.19e-10;3!CL:1000280;1.19e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002564,2.28e-23,3;CL:0002602,1.18e-16,2;CL:0002579,1.14e-10,3;CL:0002504,1.86e-10,3;CL:1000279,1.86e-10,3;CL:1000280,1.86e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.32e-08;1 | |ontology_enrichment_development_v019=UBERON:0001045;1.32e-08;1 | ||
|ontology_enrichment_disease=DOID:3095!9.77e-08!22;DOID:2994!9.77e-08!22;DOID:171!1.99e-07!10 | |ontology_enrichment_disease=DOID:3095!9.77e-08!22;DOID:2994!9.77e-08!22;DOID:171!1.99e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!4.14e-10!11;UBERON:0001155!4.41e-10!9;UBERON:0005409!3.76e-08!35 | |ontology_enrichment_uberon=UBERON:0000059!4.14e-10!11;UBERON:0001155!4.41e-10!9;UBERON:0005409!3.76e-08!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.87e-38;5!UBERON:0002216;3.87e-38;5!UBERON:0011134;3.87e-38;5!UBERON:0002209;3.87e-38;5!UBERON:0002213;3.87e-38;5!UBERON:0007844;3.87e-38;5!UBERON:0011138;3.87e-38;5!UBERON:0001130;3.87e-38;5!UBERON:0001066;3.87e-38;5!UBERON:0001468;3.87e-38;5!UBERON:0000059;1.20e-32;11!UBERON:0000160;4.25e-32;17!UBERON:0001155;2.01e-29;9!UBERON:0005409;7.75e-25;22!UBERON:0004905;8.08e-24;8!UBERON:0000982;8.08e-24;8!UBERON:0004770;8.08e-24;8!UBERON:0002242;2.55e-23;3!UBERON:0006444;1.22e-16;2!UBERON:0001995;1.22e-16;2!UBERON:0004715;1.22e-16;2!UBERON:0004921;1.16e-15;33!UBERON:0000075;7.80e-12;16!UBERON:0003688;1.27e-11;6!UBERON:0002358;1.27e-11;6!UBERON:0003684;1.27e-11;6!UBERON:0001178;1.27e-11;6!UBERON:0002418;2.12e-11;3!UBERON:0004755;2.12e-11;3!UBERON:0001154;1.32e-08;1!UBERON:0001153;1.32e-08;1!UBERON:0009854;1.32e-08;1!UBERON:0004457;6.53e-08;9!UBERON:0000042;6.53e-08;9!UBERON:0000922;1.98e-07;49!UBERON:0004765;3.39e-07;26!UBERON:0004907;6.36e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0011135;3.87e-38;5!UBERON:0002216;3.87e-38;5!UBERON:0011134;3.87e-38;5!UBERON:0002209;3.87e-38;5!UBERON:0002213;3.87e-38;5!UBERON:0007844;3.87e-38;5!UBERON:0011138;3.87e-38;5!UBERON:0001130;3.87e-38;5!UBERON:0001066;3.87e-38;5!UBERON:0001468;3.87e-38;5!UBERON:0000059;1.20e-32;11!UBERON:0000160;4.25e-32;17!UBERON:0001155;2.01e-29;9!UBERON:0005409;7.75e-25;22!UBERON:0004905;8.08e-24;8!UBERON:0000982;8.08e-24;8!UBERON:0004770;8.08e-24;8!UBERON:0002242;2.55e-23;3!UBERON:0006444;1.22e-16;2!UBERON:0001995;1.22e-16;2!UBERON:0004715;1.22e-16;2!UBERON:0004921;1.16e-15;33!UBERON:0000075;7.80e-12;16!UBERON:0003688;1.27e-11;6!UBERON:0002358;1.27e-11;6!UBERON:0003684;1.27e-11;6!UBERON:0001178;1.27e-11;6!UBERON:0002418;2.12e-11;3!UBERON:0004755;2.12e-11;3!UBERON:0001154;1.32e-08;1!UBERON:0001153;1.32e-08;1!UBERON:0009854;1.32e-08;1!UBERON:0004457;6.53e-08;9!UBERON:0000042;6.53e-08;9!UBERON:0000922;1.98e-07;49!UBERON:0004765;3.39e-07;26!UBERON:0004907;6.36e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.34e-38,5;UBERON:0002216,3.34e-38,5;UBERON:0011134,3.34e-38,5;UBERON:0002209,3.34e-38,5;UBERON:0002213,3.34e-38,5;UBERON:0005856,3.34e-38,5;UBERON:0005866,3.34e-38,5;UBERON:0005863,3.34e-38,5;UBERON:0007844,3.34e-38,5;UBERON:0011138,3.34e-38,5;UBERON:0001130,3.34e-38,5;UBERON:0001066,3.34e-38,5;UBERON:0001468,3.34e-38,5;UBERON:0000059,1.43e-32,11;UBERON:0000160,3.48e-32,17;UBERON:0001155,2.34e-29,9;UBERON:0005409,5.84e-27,25;UBERON:0004905,7.38e-24,8;UBERON:0000982,7.38e-24,8;UBERON:0004770,7.38e-24,8;UBERON:0002242,2.28e-23,3;UBERON:0003068,2.28e-23,3;UBERON:0002328,2.28e-23,3;UBERON:0004880,2.28e-23,3;UBERON:0006444,1.18e-16,2;UBERON:0001995,1.18e-16,2;UBERON:0004715,1.18e-16,2;UBERON:0000075,7.46e-12,16;UBERON:0003688,1.59e-11,6;UBERON:0002358,1.59e-11,6;UBERON:0003684,1.59e-11,6;UBERON:0001178,1.59e-11,6;UBERON:0002418,2.07e-11,3;UBERON:0004755,2.07e-11,3;UBERON:0004457,6.20e-10,12;UBERON:0000042,6.20e-10,12;UBERON:0001154,8.36e-09,1;UBERON:0001153,8.36e-09,1;UBERON:0001045,8.36e-09,1;UBERON:0004907,5.40e-07,5;UBERON:0002108,7.70e-07,4 | |||
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|short_description=p1@NKX3-2 | |short_description=p1@NKX3-2 | ||
}} | }} |
Latest revision as of 04:49, 25 September 2015
Short description: | p1@NKX3-2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX3-2_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000382438_5end |
EntrezGene: | NKX3-2 |
HGNC: | 951 |
UniProt: | P78367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 2.28e-23 | 3 |
annulus pulposus cell | 1.18e-16 | 2 |
omentum preadipocyte | 1.14e-10 | 3 |
enteric smooth muscle cell | 1.86e-10 | 3 |
smooth muscle cell of large intestine | 1.86e-10 | 3 |
smooth muscle cell of colon | 1.86e-10 | 3 |