FFCP PHASE1:Hg19::chr17:35293950..35293973,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000528383,ENST00000529264,ENST00000532387_5end | |association_with_transcript=0bp_to_ENST00000528383,ENST00000529264,ENST00000532387_5end | ||
|cluster_id=chr17:35293950..35293973,- | |||
|coexpression_cluster_id=C3624 | |coexpression_cluster_id=C3624 | ||
|description=CAGE_peak_1_at_ENST00000528383_5end,CAGE_peak_1_at_ENST00000529264_5end,CAGE_peak_1_at_ENST00000532387_5end | |description=CAGE_peak_1_at_ENST00000528383_5end,CAGE_peak_1_at_ENST00000529264_5end,CAGE_peak_1_at_ENST00000532387_5end | ||
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|ontology_enrichment_celltype=CL:1000507!1.59e-16!12;CL:1000494!1.59e-16!12;CL:1000449!6.54e-14!16;CL:1000497!5.70e-12!18;CL:0002518!5.70e-12!18;CL:0002681!1.41e-09!13;CL:0002584!1.41e-09!13;CL:0000066!1.70e-07!254 | |ontology_enrichment_celltype=CL:1000507!1.59e-16!12;CL:1000494!1.59e-16!12;CL:1000449!6.54e-14!16;CL:1000497!5.70e-12!18;CL:0002518!5.70e-12!18;CL:0002681!1.41e-09!13;CL:0002584!1.41e-09!13;CL:0000066!1.70e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000507;6.69e-42;10!CL:1000494;6.69e-42;10!CL:1000449;8.59e-33;15!CL:1000497;1.16e-28;17!CL:0002518;1.16e-28;17!CL:0002681;1.37e-21;12!CL:0002584;1.37e-21;12!CL:0000239;3.95e-13;3!CL:1000615;3.95e-13;3!CL:0002306;3.95e-13;3!CL:0000083;4.34e-10;4!CL:0000650;1.07e-09;2!CL:1000500;1.07e-09;2!CL:1000618;1.07e-09;2!CL:1001318;1.07e-09;2!CL:0002173;1.07e-09;2 | |ontology_enrichment_celltype_v019=CL:1000507;6.69e-42;10!CL:1000494;6.69e-42;10!CL:1000449;8.59e-33;15!CL:1000497;1.16e-28;17!CL:0002518;1.16e-28;17!CL:0002681;1.37e-21;12!CL:0002584;1.37e-21;12!CL:0000239;3.95e-13;3!CL:1000615;3.95e-13;3!CL:0002306;3.95e-13;3!CL:0000083;4.34e-10;4!CL:0000650;1.07e-09;2!CL:1000500;1.07e-09;2!CL:1000618;1.07e-09;2!CL:1001318;1.07e-09;2!CL:0002173;1.07e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.46e-42,10;CL:1000494,6.46e-42,10;CL:1000449,8.12e-33,15;CL:1000497,1.11e-28,17;CL:0002518,1.11e-28,17;CL:0002681,1.26e-21,12;CL:0002584,1.26e-21,12;CL:0000239,3.49e-13,3;CL:1000615,3.49e-13,3;CL:0002306,3.49e-13,3;CL:0000083,3.84e-10,4;CL:0000650,1.07e-09,2;CL:1000500,1.07e-09,2;CL:1000618,1.07e-09,2;CL:1001318,1.07e-09,2;CL:0002173,1.07e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.39e-14;3 | |ontology_enrichment_development_v019=UBERON:0006215;1.39e-14;3 | ||
|ontology_enrichment_disease=DOID:305!7.80e-10!106;DOID:0050687!2.15e-09!143;DOID:162!7.13e-09!235;DOID:14566!2.22e-08!239 | |ontology_enrichment_disease=DOID:305!7.80e-10!106;DOID:0050687!2.15e-09!143;DOID:162!7.13e-09!235;DOID:14566!2.22e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:1793;4.34e-10;4!DOID:4074;2.51e-09;2!DOID:4905;2.51e-09;2!DOID:3498;2.51e-09;2!DOID:170;7.29e-07;6 | |ontology_enrichment_disease_v019=DOID:1793;4.34e-10;4!DOID:4074;2.51e-09;2!DOID:4905;2.51e-09;2!DOID:3498;2.51e-09;2!DOID:170;7.29e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1793,3.84e-10,4;DOID:4074,2.13e-09,2;DOID:4905,2.13e-09,2;DOID:3498,2.13e-09,2;DOID:170,6.73e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000489!1.10e-21!32;UBERON:0002113!2.17e-20!27;UBERON:0003918!2.17e-20!27;UBERON:0005095!2.17e-20!27;UBERON:0007687!2.17e-20!27;UBERON:0009773!1.59e-16!12;UBERON:0001231!1.59e-16!12;UBERON:0004810!1.59e-16!12;UBERON:0000080!2.53e-16!18;UBERON:0002120!2.53e-16!18;UBERON:0004875!2.53e-16!18;UBERON:0005721!2.53e-16!18;UBERON:0005754!2.53e-16!18;UBERON:0007297!2.53e-16!18;UBERON:0003886!9.83e-16!63;UBERON:0003887!4.40e-15!21;UBERON:0006555!4.71e-15!17;UBERON:0005103!4.71e-15!17;UBERON:0000083!4.71e-15!17;UBERON:0009201!4.71e-15!17;UBERON:0004819!4.71e-15!17;UBERON:0006553!4.71e-15!17;UBERON:0003074!4.71e-15!17;UBERON:0003060!4.71e-15!17;UBERON:0002553!1.87e-14!70;UBERON:0004876!2.94e-14!20;UBERON:0004211!6.54e-14!16;UBERON:0001285!6.54e-14!16;UBERON:0007684!6.54e-14!16;UBERON:0003220!6.54e-14!16;UBERON:0004208!6.54e-14!16;UBERON:0003076!1.41e-13!15;UBERON:0003057!1.41e-13!15;UBERON:0005177!1.88e-13!107;UBERON:0000464!7.92e-13!104;UBERON:0004733!1.12e-12!12;UBERON:0002028!1.12e-12!12;UBERON:0007277!1.12e-12!12;UBERON:0006554!1.16e-12!44;UBERON:0001008!3.11e-12!45;UBERON:0003103!9.15e-12!69;UBERON:0004732!1.70e-11!13;UBERON:0000058!1.91e-11!26;UBERON:0005172!8.67e-11!55;UBERON:0005173!8.67e-11!55;UBERON:0001225!1.41e-09!13;UBERON:0008987!1.41e-09!13;UBERON:0000466!1.85e-09!126;UBERON:0003064!3.56e-09!37;UBERON:0001851!4.05e-09!16;UBERON:0002417!4.59e-09!61;UBERON:0000916!4.59e-09!61;UBERON:0001017!5.84e-09!82;UBERON:0005743!6.08e-09!86;UBERON:0002680!7.65e-09!9;UBERON:0001895!7.65e-09!9;UBERON:0010092!7.65e-09!9;UBERON:0000073!5.30e-08!94;UBERON:0001016!5.30e-08!94;UBERON:0000475!3.02e-07!365;UBERON:0002298!3.39e-07!8;UBERON:0009569!6.19e-07!113;UBERON:0000955!6.61e-07!69;UBERON:0006238!6.61e-07!69;UBERON:0000353!8.28e-07!17 | |ontology_enrichment_uberon=UBERON:0000489!1.10e-21!32;UBERON:0002113!2.17e-20!27;UBERON:0003918!2.17e-20!27;UBERON:0005095!2.17e-20!27;UBERON:0007687!2.17e-20!27;UBERON:0009773!1.59e-16!12;UBERON:0001231!1.59e-16!12;UBERON:0004810!1.59e-16!12;UBERON:0000080!2.53e-16!18;UBERON:0002120!2.53e-16!18;UBERON:0004875!2.53e-16!18;UBERON:0005721!2.53e-16!18;UBERON:0005754!2.53e-16!18;UBERON:0007297!2.53e-16!18;UBERON:0003886!9.83e-16!63;UBERON:0003887!4.40e-15!21;UBERON:0006555!4.71e-15!17;UBERON:0005103!4.71e-15!17;UBERON:0000083!4.71e-15!17;UBERON:0009201!4.71e-15!17;UBERON:0004819!4.71e-15!17;UBERON:0006553!4.71e-15!17;UBERON:0003074!4.71e-15!17;UBERON:0003060!4.71e-15!17;UBERON:0002553!1.87e-14!70;UBERON:0004876!2.94e-14!20;UBERON:0004211!6.54e-14!16;UBERON:0001285!6.54e-14!16;UBERON:0007684!6.54e-14!16;UBERON:0003220!6.54e-14!16;UBERON:0004208!6.54e-14!16;UBERON:0003076!1.41e-13!15;UBERON:0003057!1.41e-13!15;UBERON:0005177!1.88e-13!107;UBERON:0000464!7.92e-13!104;UBERON:0004733!1.12e-12!12;UBERON:0002028!1.12e-12!12;UBERON:0007277!1.12e-12!12;UBERON:0006554!1.16e-12!44;UBERON:0001008!3.11e-12!45;UBERON:0003103!9.15e-12!69;UBERON:0004732!1.70e-11!13;UBERON:0000058!1.91e-11!26;UBERON:0005172!8.67e-11!55;UBERON:0005173!8.67e-11!55;UBERON:0001225!1.41e-09!13;UBERON:0008987!1.41e-09!13;UBERON:0000466!1.85e-09!126;UBERON:0003064!3.56e-09!37;UBERON:0001851!4.05e-09!16;UBERON:0002417!4.59e-09!61;UBERON:0000916!4.59e-09!61;UBERON:0001017!5.84e-09!82;UBERON:0005743!6.08e-09!86;UBERON:0002680!7.65e-09!9;UBERON:0001895!7.65e-09!9;UBERON:0010092!7.65e-09!9;UBERON:0000073!5.30e-08!94;UBERON:0001016!5.30e-08!94;UBERON:0000475!3.02e-07!365;UBERON:0002298!3.39e-07!8;UBERON:0009569!6.19e-07!113;UBERON:0000955!6.61e-07!69;UBERON:0006238!6.61e-07!69;UBERON:0000353!8.28e-07!17 | ||
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|short_description=p1@ENST00000528383,p1@ENST00000529264,p1@ENST00000532387 | |short_description=p1@ENST00000528383,p1@ENST00000529264,p1@ENST00000532387 | ||
}} | }} |
Latest revision as of 15:48, 25 July 2015
Short description: | p1@ENST00000528383, p1@ENST00000529264, p1@ENST00000532387 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000528383_5end, CAGE_peak_1_at_ENST00000529264_5end, CAGE_peak_1_at_ENST00000532387_5end |
Coexpression cluster: | C3624_cerebellum_serous_papillary_Renal_signet_teratocarcinoma_osteosarcoma |
Association with transcript: | 0bp_to_ENST00000528383, ENST00000529264, ENST00000532387_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.46e-42 | 10 |
nephron tubule epithelial cell | 6.46e-42 | 10 |
epithelial cell of nephron | 8.12e-33 | 15 |
kidney cell | 1.11e-28 | 17 |
kidney epithelial cell | 1.11e-28 | 17 |
kidney cortical cell | 1.26e-21 | 12 |
renal cortical epithelial cell | 1.26e-21 | 12 |
brush border epithelial cell | 3.49e-13 | 3 |
kidney cortex tubule cell | 3.49e-13 | 3 |
epithelial cell of proximal tubule | 3.49e-13 | 3 |
epithelial cell of pancreas | 3.84e-10 | 4 |
mesangial cell | 1.07e-09 | 2 |
kidney interstitial cell | 1.07e-09 | 2 |
juxtaglomerular complex cell | 1.07e-09 | 2 |
renal interstitial pericyte | 1.07e-09 | 2 |
extraglomerular mesangial cell | 1.07e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreatic cancer | 3.84e-10 | 4 |
pancreas adenocarcinoma | 2.13e-09 | 2 |
pancreatic carcinoma | 2.13e-09 | 2 |
pancreatic ductal adenocarcinoma | 2.13e-09 | 2 |
endocrine gland cancer | 6.73e-07 | 6 |