FFCP PHASE1:Hg19::chr1:223276523..223276530,-: Difference between revisions
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|id=chr1:223276523..223276530,-
|short_description=p@chr1:223276523..223276530,-
|description=CAGE_peak_at_chr1:223276523..223276530,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:223276523..223276530,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr1:223276523..223276530,- | |||
|id=chr1:223276523..223276530,- | |||
|ontology_enrichment_celltype=CL:0000115!3.90e-07!35;CL:0002139!6.11e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002188;1.71e-14;5!CL:1000746;9.43e-11;7!CL:1000612;9.43e-11;7!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.60e-14,5;CL:1000746,8.99e-11,7;CL:1000612,8.99e-11,7;CL:0002681,7.92e-07,12;CL:0002584,7.92e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.96e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001301!1.06e-11!1;UBERON:0002134!1.18e-11!1;UBERON:0005208!1.18e-11!1;UBERON:0005946!1.18e-11!1;UBERON:0005965!1.18e-11!1;UBERON:0002078!1.18e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.34e-66;1!UBERON:0006947;3.66e-23;3!UBERON:0004054;3.66e-23;3!UBERON:0005904;9.45e-18;4!UBERON:0000074;9.43e-11;7!UBERON:0001229;9.43e-11;7!UBERON:0000058;6.34e-08;10!UBERON:0003135;2.55e-07;11!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.66e-66,1;UBERON:0005103,9.08e-34,8;UBERON:0000083,9.08e-34,8;UBERON:0009201,9.08e-34,8;UBERON:0006553,9.08e-34,8;UBERON:0003074,9.08e-34,8;UBERON:0003060,9.08e-34,8;UBERON:0000080,3.59e-30,9;UBERON:0002120,3.59e-30,9;UBERON:0004875,3.59e-30,9;UBERON:0005721,3.59e-30,9;UBERON:0005754,3.59e-30,9;UBERON:0007297,3.59e-30,9;UBERON:0004876,6.20e-25,11;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0003887,5.74e-23,12;UBERON:0005904,1.03e-17,4;UBERON:0006555,1.51e-17,16;UBERON:0004819,1.51e-17,16;UBERON:0000058,5.66e-15,19;UBERON:0002113,2.91e-11,26;UBERON:0003918,2.91e-11,26;UBERON:0011143,2.91e-11,26;UBERON:0005095,2.91e-11,26;UBERON:0007687,2.91e-11,26;UBERON:0010532,8.99e-11,7;UBERON:0000074,8.99e-11,7;UBERON:0001229,8.99e-11,7;UBERON:0001230,8.99e-11,7;UBERON:0003220,8.99e-11,7;UBERON:0005749,8.99e-11,7;UBERON:0004199,8.99e-11,7;UBERON:0004209,8.99e-11,7;UBERON:0004198,8.99e-11,7;UBERON:0003064,1.54e-10,28;UBERON:0000489,1.25e-09,31;UBERON:0003135,2.63e-07,11;UBERON:0005177,6.45e-07,101;UBERON:0001225,7.92e-07,12;UBERON:0008987,7.92e-07,12 | |||
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|short_description=p@chr1:223276523..223276530,- | |||
}} | }} |
Latest revision as of 04:17, 28 July 2015
Short description: | p@chr1:223276523..223276530, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:223276523..223276530, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.60e-14 | 5 |
glomerular cell | 8.99e-11 | 7 |
kidney corpuscule cell | 8.99e-11 | 7 |
kidney cortical cell | 7.92e-07 | 12 |
renal cortical epithelial cell | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |