FFCP PHASE1:Hg19::chr22:30653399..30653414,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:30653399..30653414,- | |||
|coexpression_cluster_id=C1262 | |coexpression_cluster_id=C1262 | ||
|description=CAGE_peak_at_chr22:30653399..30653414,- | |description=CAGE_peak_at_chr22:30653399..30653414,- | ||
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|ontology_enrichment_celltype=CL:0000066!6.99e-19!254;CL:1000497!2.43e-18!18;CL:0002518!2.43e-18!18;CL:1000449!4.35e-15!16;CL:1000507!7.00e-15!12;CL:1000494!7.00e-15!12;CL:0002681!1.73e-10!13;CL:0002584!1.73e-10!13;CL:0002149!3.55e-08!6;CL:0002255!3.55e-08!6 | |ontology_enrichment_celltype=CL:0000066!6.99e-19!254;CL:1000497!2.43e-18!18;CL:0002518!2.43e-18!18;CL:1000449!4.35e-15!16;CL:1000507!7.00e-15!12;CL:1000494!7.00e-15!12;CL:0002681!1.73e-10!13;CL:0002584!1.73e-10!13;CL:0002149!3.55e-08!6;CL:0002255!3.55e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.34e-34;10!CL:1000494;4.34e-34;10!CL:1000497;7.27e-33;17!CL:0002518;7.27e-33;17!CL:1000449;1.43e-26;15!CL:0002681;1.10e-17;12!CL:0002584;1.10e-17;12!CL:0002149;1.55e-14;6!CL:0002255;1.55e-14;6!CL:0000239;2.01e-11;3!CL:1000615;2.01e-11;3!CL:0002306;2.01e-11;3!CL:0000159;5.99e-08;2!CL:0000650;7.78e-08;2!CL:1000500;7.78e-08;2!CL:1000618;7.78e-08;2!CL:1001318;7.78e-08;2!CL:0002173;7.78e-08;2 | |ontology_enrichment_celltype_v019=CL:1000507;4.34e-34;10!CL:1000494;4.34e-34;10!CL:1000497;7.27e-33;17!CL:0002518;7.27e-33;17!CL:1000449;1.43e-26;15!CL:0002681;1.10e-17;12!CL:0002584;1.10e-17;12!CL:0002149;1.55e-14;6!CL:0002255;1.55e-14;6!CL:0000239;2.01e-11;3!CL:1000615;2.01e-11;3!CL:0002306;2.01e-11;3!CL:0000159;5.99e-08;2!CL:0000650;7.78e-08;2!CL:1000500;7.78e-08;2!CL:1000618;7.78e-08;2!CL:1001318;7.78e-08;2!CL:0002173;7.78e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.59e-34,10;CL:1000494,4.59e-34,10;CL:1000497,7.59e-33,17;CL:0002518,7.59e-33,17;CL:1000449,1.59e-26,15;CL:0002681,1.29e-17,12;CL:0002584,1.29e-17,12;CL:0000066,2.12e-16,253;CL:0002149,1.07e-14,6;CL:0002255,1.07e-14,6;CL:0000239,2.62e-11,3;CL:1000615,2.62e-11,3;CL:0002306,2.62e-11,3;CL:0000159,4.69e-08,2;CL:0000650,6.66e-08,2;CL:1000500,6.66e-08,2;CL:1000618,6.66e-08,2;CL:1001318,6.66e-08,2;CL:0002173,6.66e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.04e-27!106;DOID:0050687!2.17e-26!143;DOID:162!9.38e-19!235;DOID:14566!5.88e-18!239;DOID:299!2.51e-15!25;DOID:3001!3.55e-08!6 | |ontology_enrichment_disease=DOID:305!2.04e-27!106;DOID:0050687!2.17e-26!143;DOID:162!9.38e-19!235;DOID:14566!5.88e-18!239;DOID:299!2.51e-15!25;DOID:3001!3.55e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:299;4.72e-15;25!DOID:3001;1.55e-14;6!DOID:3908;5.29e-11;5!DOID:120;6.26e-09;27!DOID:4468;1.24e-08;2!DOID:193;3.36e-08;29!DOID:4929;3.47e-08;2!DOID:1324;1.26e-07;15!DOID:3910;2.60e-07;2!DOID:0050615;4.14e-07;16 | |ontology_enrichment_disease_v019=DOID:299;4.72e-15;25!DOID:3001;1.55e-14;6!DOID:3908;5.29e-11;5!DOID:120;6.26e-09;27!DOID:4468;1.24e-08;2!DOID:193;3.36e-08;29!DOID:4929;3.47e-08;2!DOID:1324;1.26e-07;15!DOID:3910;2.60e-07;2!DOID:0050615;4.14e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.60e-22,143;DOID:305,1.02e-21,106;DOID:162,1.07e-15,235;DOID:14566,3.64e-15,239;DOID:299,3.92e-15,25;DOID:3001,1.07e-14,6;DOID:3908,5.66e-11,5;DOID:120,5.39e-09,27;DOID:4468,1.20e-08,2;DOID:0050686,2.00e-08,137;DOID:193,2.93e-08,29;DOID:4929,4.37e-08,2;DOID:1324,1.31e-07,15;DOID:3910,3.50e-07,2;DOID:0050615,4.29e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000058!4.09e-19!26;UBERON:0002113!2.79e-16!27;UBERON:0003918!2.79e-16!27;UBERON:0005095!2.79e-16!27;UBERON:0007687!2.79e-16!27;UBERON:0004211!4.35e-15!16;UBERON:0001285!4.35e-15!16;UBERON:0007684!4.35e-15!16;UBERON:0003220!4.35e-15!16;UBERON:0004208!4.35e-15!16;UBERON:0009773!7.00e-15!12;UBERON:0001231!7.00e-15!12;UBERON:0004810!7.00e-15!12;UBERON:0000489!9.18e-15!32;UBERON:0005177!4.58e-14!107;UBERON:0006555!5.37e-14!17;UBERON:0005103!5.37e-14!17;UBERON:0000083!5.37e-14!17;UBERON:0009201!5.37e-14!17;UBERON:0004819!5.37e-14!17;UBERON:0006553!5.37e-14!17;UBERON:0003074!5.37e-14!17;UBERON:0003060!5.37e-14!17;UBERON:0006554!3.97e-13!44;UBERON:0000080!4.99e-13!18;UBERON:0002120!4.99e-13!18;UBERON:0004875!4.99e-13!18;UBERON:0005721!4.99e-13!18;UBERON:0005754!4.99e-13!18;UBERON:0007297!4.99e-13!18;UBERON:0001008!1.07e-12!45;UBERON:0004876!2.18e-11!20;UBERON:0005172!3.35e-11!55;UBERON:0005173!3.35e-11!55;UBERON:0000466!3.49e-11!126;UBERON:0003886!8.01e-11!63;UBERON:0003887!1.09e-10!21;UBERON:0001225!1.73e-10!13;UBERON:0008987!1.73e-10!13;UBERON:0003064!3.86e-10!37;UBERON:0003104!6.42e-10!238;UBERON:0009142!6.42e-10!238;UBERON:0001851!8.73e-10!16;UBERON:0002417!1.80e-09!61;UBERON:0000916!1.80e-09!61;UBERON:0000464!1.93e-09!104;UBERON:0000353!3.46e-09!17;UBERON:0002553!4.64e-09!70;UBERON:0004921!1.88e-08!129;UBERON:0004185!1.88e-08!129;UBERON:0001041!2.33e-08!98;UBERON:0000062!4.16e-08!511;UBERON:0002394!1.13e-07!4;UBERON:0003928!1.13e-07!4;UBERON:0001007!1.19e-07!155;UBERON:0001555!1.19e-07!155;UBERON:0007026!1.19e-07!155;UBERON:0000077!2.54e-07!130;UBERON:0004119!3.08e-07!169;UBERON:0000925!3.08e-07!169;UBERON:0006595!3.08e-07!169;UBERON:0002100!6.33e-07!216;UBERON:0001264!7.00e-07!10;UBERON:0003922!7.00e-07!10;UBERON:0003923!7.00e-07!10;UBERON:0003924!7.00e-07!10;UBERON:0003921!7.00e-07!10;UBERON:0002114!7.83e-07!12;UBERON:0009569!8.26e-07!113 | |ontology_enrichment_uberon=UBERON:0000058!4.09e-19!26;UBERON:0002113!2.79e-16!27;UBERON:0003918!2.79e-16!27;UBERON:0005095!2.79e-16!27;UBERON:0007687!2.79e-16!27;UBERON:0004211!4.35e-15!16;UBERON:0001285!4.35e-15!16;UBERON:0007684!4.35e-15!16;UBERON:0003220!4.35e-15!16;UBERON:0004208!4.35e-15!16;UBERON:0009773!7.00e-15!12;UBERON:0001231!7.00e-15!12;UBERON:0004810!7.00e-15!12;UBERON:0000489!9.18e-15!32;UBERON:0005177!4.58e-14!107;UBERON:0006555!5.37e-14!17;UBERON:0005103!5.37e-14!17;UBERON:0000083!5.37e-14!17;UBERON:0009201!5.37e-14!17;UBERON:0004819!5.37e-14!17;UBERON:0006553!5.37e-14!17;UBERON:0003074!5.37e-14!17;UBERON:0003060!5.37e-14!17;UBERON:0006554!3.97e-13!44;UBERON:0000080!4.99e-13!18;UBERON:0002120!4.99e-13!18;UBERON:0004875!4.99e-13!18;UBERON:0005721!4.99e-13!18;UBERON:0005754!4.99e-13!18;UBERON:0007297!4.99e-13!18;UBERON:0001008!1.07e-12!45;UBERON:0004876!2.18e-11!20;UBERON:0005172!3.35e-11!55;UBERON:0005173!3.35e-11!55;UBERON:0000466!3.49e-11!126;UBERON:0003886!8.01e-11!63;UBERON:0003887!1.09e-10!21;UBERON:0001225!1.73e-10!13;UBERON:0008987!1.73e-10!13;UBERON:0003064!3.86e-10!37;UBERON:0003104!6.42e-10!238;UBERON:0009142!6.42e-10!238;UBERON:0001851!8.73e-10!16;UBERON:0002417!1.80e-09!61;UBERON:0000916!1.80e-09!61;UBERON:0000464!1.93e-09!104;UBERON:0000353!3.46e-09!17;UBERON:0002553!4.64e-09!70;UBERON:0004921!1.88e-08!129;UBERON:0004185!1.88e-08!129;UBERON:0001041!2.33e-08!98;UBERON:0000062!4.16e-08!511;UBERON:0002394!1.13e-07!4;UBERON:0003928!1.13e-07!4;UBERON:0001007!1.19e-07!155;UBERON:0001555!1.19e-07!155;UBERON:0007026!1.19e-07!155;UBERON:0000077!2.54e-07!130;UBERON:0004119!3.08e-07!169;UBERON:0000925!3.08e-07!169;UBERON:0006595!3.08e-07!169;UBERON:0002100!6.33e-07!216;UBERON:0001264!7.00e-07!10;UBERON:0003922!7.00e-07!10;UBERON:0003923!7.00e-07!10;UBERON:0003924!7.00e-07!10;UBERON:0003921!7.00e-07!10;UBERON:0002114!7.83e-07!12;UBERON:0009569!8.26e-07!113 | ||
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|short_description=p@chr22:30653399..30653414,- | |short_description=p@chr22:30653399..30653414,- | ||
}} | }} |
Latest revision as of 20:04, 28 July 2015
Short description: | p@chr22:30653399..30653414, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:30653399..30653414, - |
Coexpression cluster: | C1262_renal_clear_Renal_papillotubular_embryonic_mucinous_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.59e-34 | 10 |
nephron tubule epithelial cell | 4.59e-34 | 10 |
kidney cell | 7.59e-33 | 17 |
kidney epithelial cell | 7.59e-33 | 17 |
epithelial cell of nephron | 1.59e-26 | 15 |
kidney cortical cell | 1.29e-17 | 12 |
renal cortical epithelial cell | 1.29e-17 | 12 |
epithelial cell | 2.12e-16 | 253 |
epithelial cell of uterus | 1.07e-14 | 6 |
stromal cell of endometrium | 1.07e-14 | 6 |
brush border epithelial cell | 2.62e-11 | 3 |
kidney cortex tubule cell | 2.62e-11 | 3 |
epithelial cell of proximal tubule | 2.62e-11 | 3 |
seromucus secreting cell | 4.69e-08 | 2 |
mesangial cell | 6.66e-08 | 2 |
kidney interstitial cell | 6.66e-08 | 2 |
juxtaglomerular complex cell | 6.66e-08 | 2 |
renal interstitial pericyte | 6.66e-08 | 2 |
extraglomerular mesangial cell | 6.66e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.60e-22 | 143 |
carcinoma | 1.02e-21 | 106 |
cancer | 1.07e-15 | 235 |
disease of cellular proliferation | 3.64e-15 | 239 |
adenocarcinoma | 3.92e-15 | 25 |
female reproductive endometrioid cancer | 1.07e-14 | 6 |
non-small cell lung carcinoma | 5.66e-11 | 5 |
female reproductive organ cancer | 5.39e-09 | 27 |
clear cell adenocarcinoma | 1.20e-08 | 2 |
organ system cancer | 2.00e-08 | 137 |
reproductive organ cancer | 2.93e-08 | 29 |
tubular adenocarcinoma | 4.37e-08 | 2 |
lung cancer | 1.31e-07 | 15 |
lung adenocarcinoma | 3.50e-07 | 2 |
respiratory system cancer | 4.29e-07 | 16 |