FFCP PHASE1:Hg19::chr1:153599635..153599646,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:153599635..153599646,-
|short_description=p17@S100A13
|description=CAGE_peak_17_at_S100A13_5end
|association_with_transcript=-96bp_to_uc001fcf.3_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6284 | |EntrezGene=6284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |HGNC=10490 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-96bp_to_uc001fcf.3_5end | |||
|cluster_id=chr1:153599635..153599646,- | |||
|description=CAGE_peak_17_at_S100A13_5end | |||
|id=chr1:153599635..153599646,- | |||
|ontology_enrichment_celltype=CL:1000507!1.98e-08!12;CL:1000494!1.98e-08!12;CL:1000449!2.37e-08!16;CL:0000499!2.93e-07!27;CL:1000497!6.02e-07!18;CL:0002518!6.02e-07!18;CL:0002149!8.53e-07!6;CL:0002255!8.53e-07!6;CL:0002334!9.65e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.33e-26;10!CL:1000494;1.33e-26;10!CL:0002149;4.33e-24;6!CL:0002255;4.33e-24;6!CL:1000449;1.18e-22;15!CL:0002681;4.96e-22;12!CL:0002584;4.96e-22;12!CL:1000497;7.51e-20;17!CL:0002518;7.51e-20;17!CL:0000239;4.15e-17;3!CL:1000615;4.15e-17;3!CL:0002577;4.15e-17;3!CL:0002306;4.15e-17;3!CL:0000650;8.32e-13;2!CL:1000500;8.32e-13;2!CL:1000618;8.32e-13;2!CL:1001318;8.32e-13;2!CL:0002173;8.32e-13;2!CL:0002559;4.58e-11;5!CL:0000346;6.04e-09;3!CL:1000428;6.04e-09;3!CL:1000746;5.96e-08;7!CL:1000612;5.96e-08;7!CL:0002581;2.22e-07;1!CL:0000499;7.62e-07;28!CL:0000669;8.25e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.68e-27,10;CL:1000494,6.68e-27,10;CL:0002149,2.36e-24,6;CL:0002255,2.36e-24,6;CL:1000449,5.42e-23,15;CL:0002681,2.39e-22,12;CL:0002584,2.39e-22,12;CL:1000497,3.79e-20,17;CL:0002518,3.79e-20,17;CL:0000239,2.99e-17,3;CL:1000615,2.99e-17,3;CL:0002306,2.99e-17,3;CL:0002577,3.16e-17,3;CL:0000650,9.95e-13,2;CL:1000500,9.95e-13,2;CL:1000618,9.95e-13,2;CL:1001318,9.95e-13,2;CL:0002173,9.95e-13,2;CL:0002559,4.37e-11,5;CL:0000346,6.42e-09,3;CL:1000428,6.42e-09,3;CL:1000746,5.18e-08,7;CL:1000612,5.18e-08,7;CL:0002581,2.22e-07,1;CL:0000499,7.39e-07,28;CL:0000669,9.01e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.24e-11;5!UBERON:0005795;1.97e-09;10 | |||
|ontology_enrichment_disease=DOID:3001!8.53e-07!6;DOID:193!8.76e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:3001;4.33e-24;6!DOID:120;1.69e-09;27!DOID:193;8.81e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.36e-24,6;DOID:120,1.33e-09,27;DOID:193,7.06e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0003886!1.11e-09!63;UBERON:0000080!2.36e-09!18;UBERON:0002120!2.36e-09!18;UBERON:0004875!2.36e-09!18;UBERON:0005721!2.36e-09!18;UBERON:0005754!2.36e-09!18;UBERON:0007297!2.36e-09!18;UBERON:0006555!1.06e-08!17;UBERON:0005103!1.06e-08!17;UBERON:0000083!1.06e-08!17;UBERON:0009201!1.06e-08!17;UBERON:0004819!1.06e-08!17;UBERON:0006553!1.06e-08!17;UBERON:0003074!1.06e-08!17;UBERON:0003060!1.06e-08!17;UBERON:0002113!1.98e-08!27;UBERON:0003918!1.98e-08!27;UBERON:0005095!1.98e-08!27;UBERON:0007687!1.98e-08!27;UBERON:0009773!1.98e-08!12;UBERON:0001231!1.98e-08!12;UBERON:0004810!1.98e-08!12;UBERON:0004211!2.37e-08!16;UBERON:0001285!2.37e-08!16;UBERON:0007684!2.37e-08!16;UBERON:0003220!2.37e-08!16;UBERON:0004208!2.37e-08!16;UBERON:0002553!3.41e-08!70;UBERON:0004876!6.52e-08!20;UBERON:0000475!1.15e-07!365;UBERON:0003887!2.65e-07!21;UBERON:0000489!6.40e-07!32;UBERON:0006554!6.96e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.33e-26;10!UBERON:0009773;1.33e-26;10!UBERON:0001231;1.33e-26;10!UBERON:0004810;1.33e-26;10!UBERON:0006555;1.18e-22;15!UBERON:0004819;1.18e-22;15!UBERON:0001285;1.18e-22;15!UBERON:0007684;1.18e-22;15!UBERON:0001225;4.96e-22;12!UBERON:0008987;4.96e-22;12!UBERON:0001851;1.87e-17;15!UBERON:0000353;1.87e-17;15!UBERON:0006853;4.15e-17;3!UBERON:0007685;4.15e-17;3!UBERON:0004134;4.15e-17;3!UBERON:0002113;1.02e-13;24!UBERON:0011143;1.02e-13;24!UBERON:0003891;1.43e-13;4!UBERON:0001987;5.70e-13;4!UBERON:0003567;8.32e-13;2!UBERON:0003838;8.32e-13;2!UBERON:0003586;8.32e-13;2!UBERON:0005169;8.32e-13;2!UBERON:0002321;8.32e-13;2!UBERON:0005215;8.32e-13;2!UBERON:0002303;8.32e-13;2!UBERON:0002319;8.32e-13;2!UBERON:0000474;2.20e-11;37!UBERON:0000489;3.81e-11;29!UBERON:0002073;4.58e-11;5!UBERON:0002046;5.24e-11;5!UBERON:0006554;9.82e-11;30!UBERON:0001008;9.82e-11;30!UBERON:0003100;7.13e-10;41!UBERON:0000412;6.04e-09;3!UBERON:0001992;6.04e-09;3!UBERON:0000995;2.40e-08;17!UBERON:0000074;5.96e-08;7!UBERON:0001229;5.96e-08;7!UBERON:0003975;7.24e-08;18!UBERON:0003134;8.27e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,6.68e-27,10;UBERON:0004211,5.42e-23,15;UBERON:0009773,5.42e-23,15;UBERON:0001231,5.42e-23,15;UBERON:0001285,5.42e-23,15;UBERON:0007684,5.42e-23,15;UBERON:0004208,5.42e-23,15;UBERON:0001225,2.39e-22,12;UBERON:0008987,2.39e-22,12;UBERON:0006555,1.76e-21,16;UBERON:0004819,1.76e-21,16;UBERON:0001851,1.05e-17,15;UBERON:0000353,1.05e-17,15;UBERON:0006853,2.99e-17,3;UBERON:0007685,2.99e-17,3;UBERON:0004134,2.99e-17,3;UBERON:0000995,2.68e-16,21;UBERON:0005795,1.68e-15,22;UBERON:0003975,1.68e-15,22;UBERON:0003134,1.43e-13,37;UBERON:0000474,1.43e-13,37;UBERON:0004175,1.71e-13,25;UBERON:0003891,2.10e-13,4;UBERON:0001987,4.65e-13,4;UBERON:0004340,4.65e-13,4;UBERON:0002113,9.31e-13,26;UBERON:0003918,9.31e-13,26;UBERON:0011143,9.31e-13,26;UBERON:0005095,9.31e-13,26;UBERON:0007687,9.31e-13,26;UBERON:0003567,9.95e-13,2;UBERON:0003838,9.95e-13,2;UBERON:0003586,9.95e-13,2;UBERON:0005169,9.95e-13,2;UBERON:0002321,9.95e-13,2;UBERON:0005215,9.95e-13,2;UBERON:0002303,9.95e-13,2;UBERON:0002319,9.95e-13,2;UBERON:0006554,2.29e-12,47;UBERON:0003100,4.53e-12,41;UBERON:0001008,4.58e-12,48;UBERON:0002073,4.37e-11,5;UBERON:0005086,4.37e-11,5;UBERON:0002046,6.55e-11,5;UBERON:0004117,6.55e-11,5;UBERON:0007689,6.55e-11,5;UBERON:0007123,6.55e-11,5;UBERON:0003091,6.55e-11,5;UBERON:0000489,1.67e-10,31;UBERON:0003133,4.78e-10,48;UBERON:0000412,6.42e-09,3;UBERON:0001992,6.42e-09,3;UBERON:0010532,5.18e-08,7;UBERON:0000074,5.18e-08,7;UBERON:0001229,5.18e-08,7;UBERON:0001230,5.18e-08,7;UBERON:0003220,5.18e-08,7;UBERON:0005749,5.18e-08,7;UBERON:0004199,5.18e-08,7;UBERON:0004209,5.18e-08,7;UBERON:0004198,5.18e-08,7;UBERON:0005156,7.63e-08,59;UBERON:0000990,7.63e-08,59;UBERON:0003124,1.15e-07,7;UBERON:0005103,4.63e-07,8;UBERON:0000083,4.63e-07,8;UBERON:0009201,4.63e-07,8;UBERON:0006553,4.63e-07,8;UBERON:0003074,4.63e-07,8;UBERON:0003060,4.63e-07,8 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,1.35433163884467,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.472674085820339,0.221729397462564,0.351339142772504,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0.194874010322397,0,0.184099797284599,0,0,0.503760491138201,0,0,0,0,0,0,0,0.10366105501537,0,0,0,3.21620469096443,4.14404764057442,0,1.44375896333917,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0,0.95339771567235,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,1.14861935834114,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0.157702415033935,0.234282829985426,0.601892199455438,0,0,0,0,0.260650843404249,0.587403472388222,0.686286847621712,0,0,0,1.21251028578504,1.66435439510497,1.20956117331872,0.992431231275107,0,0.561320188866147,0.640695746278505,0,0.804269605718038,4.45254199334973,0.154209693802656,0.355123450626254,0.328508624055237,0.519254429183621,0.348631135379878,0.120859449591622,0.40101294060657,0,0,0.182091168006717,0.393373244878272,1.80479845162965,0.616122696835318,0.784349769176855,1.46139224653261,0.527758144464379,0,0,1.72732732881711,0,2.16757150035082,3.01013864312912,1.01950509218015,1.66215201785745,1.56712328305525,0,0,0.256450125116389,0.328014645699706,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0.10115778085555,0.929691098594572,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,1.116475108079,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0.211107635297664,0.987884678879706,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.556543525114529,0,0,0.19924798825107,0,0,0.511343412510774,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.31593289814244,0.300646838828985,0,0.664653872707185,0,0.313932918407225,1.19472429772959,3.41531455235751,0.138674673013139,1.73559738335131,0.195984794828755,0.174118413160805,0.17472666824203,0.343972064943233,0,0.146178634172371,0,0.0969890164884194,0.176512253383001,0.225980740780532,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0,0,0.248505071130865,0,0,0.313808538937,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.86686278029118,0.419636705079985,0.211200673038813,0.35857467866569,0,0,0,0.25426853765475,0,0.864221491201268,0.326587360109409,0,0,0.511164065356265,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0.570930667089935,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0.621051827505038,0,0,0,0.150257608997218,0,1.22061219961398,0.363697318405119,1.50374779859484,0,0,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0.168942440653073,0.512483037175893,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.552317850755522,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,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| ||
|short_description=p17@S100A13 | |||
}} | }} |
Latest revision as of 06:40, 17 September 2015
Short description: | p17@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | -96bp_to_uc001fcf.3_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.68e-27 | 10 |
nephron tubule epithelial cell | 6.68e-27 | 10 |
epithelial cell of uterus | 2.36e-24 | 6 |
stromal cell of endometrium | 2.36e-24 | 6 |
epithelial cell of nephron | 5.42e-23 | 15 |
kidney cortical cell | 2.39e-22 | 12 |
renal cortical epithelial cell | 2.39e-22 | 12 |
kidney cell | 3.79e-20 | 17 |
kidney epithelial cell | 3.79e-20 | 17 |
brush border epithelial cell | 2.99e-17 | 3 |
kidney cortex tubule cell | 2.99e-17 | 3 |
epithelial cell of proximal tubule | 2.99e-17 | 3 |
placental epithelial cell | 3.16e-17 | 3 |
mesangial cell | 9.95e-13 | 2 |
kidney interstitial cell | 9.95e-13 | 2 |
juxtaglomerular complex cell | 9.95e-13 | 2 |
renal interstitial pericyte | 9.95e-13 | 2 |
extraglomerular mesangial cell | 9.95e-13 | 2 |
hair follicle cell | 4.37e-11 | 5 |
hair follicle dermal papilla cell | 6.42e-09 | 3 |
stem cell of epidermis | 6.42e-09 | 3 |
glomerular cell | 5.18e-08 | 7 |
kidney corpuscule cell | 5.18e-08 | 7 |
perirenal preadipocyte | 2.22e-07 | 1 |
stromal cell | 7.39e-07 | 28 |
pericyte cell | 9.01e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.36e-24 | 6 |
female reproductive organ cancer | 1.33e-09 | 27 |
reproductive organ cancer | 7.06e-09 | 29 |