FFCP PHASE1:Hg19::chr1:153581821..153581845,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153581821..153581845,-
|short_description=p8@S100A16
|description=CAGE_peak_8_at_S100A16_5end
|association_with_transcript=0bp_to_ENST00000368705_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140576 | |EntrezGene=140576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20441 | |HGNC=20441 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FQ6 | |UniProt=Q96FQ6 | ||
|association_with_transcript=0bp_to_ENST00000368705_5end | |||
|cluster_id=chr1:153581821..153581845,- | |||
|description=CAGE_peak_8_at_S100A16_5end | |||
|id=chr1:153581821..153581845,- | |||
|ontology_enrichment_celltype=CL:0000066!2.50e-32!254;CL:0000213!5.84e-20!57;CL:0000215!5.84e-20!57;CL:0002321!9.86e-19!248;CL:0000220!1.35e-18!246;CL:0000222!2.20e-17!119;CL:0000115!1.03e-16!35;CL:0002078!1.20e-16!44;CL:0002139!1.92e-15!24;CL:0000071!9.72e-12!18;CL:0002546!9.72e-12!18;CL:1000449!2.25e-08!16;CL:0000076!2.47e-08!62;CL:1000497!1.00e-07!18;CL:0002518!1.00e-07!18;CL:0002681!3.16e-07!13;CL:0002584!3.16e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.83e-21;36!CL:0002139;3.55e-21;24!CL:0000213;7.88e-17;58!CL:0000215;7.88e-17;58!CL:0000071;7.05e-16;18!CL:0002078;1.23e-15;45!CL:1000449;6.65e-13;15!CL:1000497;2.77e-12;17!CL:0002518;2.77e-12;17!CL:0002681;1.63e-11;12!CL:0002584;1.63e-11;12!CL:1000413;2.43e-08;9!CL:1000507;3.28e-08;10!CL:1000494;3.28e-08;10!CL:0000077;3.45e-08;19!CL:1000746;4.97e-08;7!CL:1000612;4.97e-08;7!CL:0002138;7.32e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.79e-36,253;CL:0000213,9.60e-30,58;CL:0000215,9.60e-30,58;CL:0000115,9.46e-26,36;CL:0002078,2.41e-25,45;CL:0002139,2.04e-21,24;CL:0000222,2.57e-16,121;CL:0000071,4.11e-16,18;CL:0002546,4.11e-16,18;CL:0002321,1.37e-15,250;CL:1000449,5.37e-13,15;CL:1000497,2.42e-12,17;CL:0002518,2.42e-12,17;CL:0000076,1.81e-11,63;CL:0002681,2.01e-11,12;CL:0002584,2.01e-11,12;CL:1000413,1.56e-08,9;CL:0000077,2.20e-08,19;CL:1000507,2.53e-08,10;CL:1000494,2.53e-08,10;CL:1000746,5.12e-08,7;CL:1000612,5.12e-08,7;CL:0005020,7.28e-07,6;CL:0002138,7.28e-07,6;CL:0005022,7.28e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.05e-16;18!UBERON:0008947;2.92e-09;29!UBERON:0001041;4.52e-08;30!CL:0005022;7.32e-07;6 | |||
|ontology_enrichment_disease=DOID:305!4.53e-12!106;DOID:0050687!5.10e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.10e-15,143;DOID:305,4.77e-14,106;DOID:162,1.76e-09,235;DOID:14566,4.60e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0003914!3.03e-15!118;UBERON:0000477!8.89e-15!286;UBERON:0000119!9.09e-13!312;UBERON:0000483!1.48e-12!309;UBERON:0002100!4.81e-12!216;UBERON:0000490!6.85e-12!138;UBERON:0004111!7.78e-12!241;UBERON:0001986!9.72e-12!18;UBERON:0004638!9.72e-12!18;UBERON:0004852!9.72e-12!18;UBERON:0000481!1.47e-11!347;UBERON:0000487!2.94e-11!22;UBERON:0003104!7.18e-11!238;UBERON:0009142!7.18e-11!238;UBERON:0000025!3.58e-10!194;UBERON:0000475!8.53e-10!365;UBERON:0006914!1.18e-09!25;UBERON:0005256!1.98e-09!143;UBERON:0001007!3.19e-09!155;UBERON:0001555!3.19e-09!155;UBERON:0007026!3.19e-09!155;UBERON:0002049!4.66e-09!79;UBERON:0007798!4.66e-09!79;UBERON:0000055!4.96e-09!69;UBERON:0005177!5.38e-09!107;UBERON:0004119!1.44e-08!169;UBERON:0000925!1.44e-08!169;UBERON:0006595!1.44e-08!169;UBERON:0004921!2.09e-08!129;UBERON:0004185!2.09e-08!129;UBERON:0004211!2.25e-08!16;UBERON:0001285!2.25e-08!16;UBERON:0007684!2.25e-08!16;UBERON:0003220!2.25e-08!16;UBERON:0004208!2.25e-08!16;UBERON:0000466!2.44e-08!126;UBERON:0001048!2.80e-08!168;UBERON:0006555!4.50e-08!17;UBERON:0005103!4.50e-08!17;UBERON:0000083!4.50e-08!17;UBERON:0009201!4.50e-08!17;UBERON:0004819!4.50e-08!17;UBERON:0006553!4.50e-08!17;UBERON:0003074!4.50e-08!17;UBERON:0003060!4.50e-08!17;UBERON:0000077!7.46e-08!130;UBERON:0009569!1.03e-07!113;UBERON:0000058!1.60e-07!26;UBERON:0001851!3.14e-07!16;UBERON:0001225!3.16e-07!13;UBERON:0008987!3.16e-07!13;UBERON:0000353!3.30e-07!17;UBERON:0005172!3.98e-07!55;UBERON:0005173!3.98e-07!55;UBERON:0000080!4.02e-07!18;UBERON:0002120!4.02e-07!18;UBERON:0004875!4.02e-07!18;UBERON:0005721!4.02e-07!18;UBERON:0005754!4.02e-07!18;UBERON:0007297!4.02e-07!18;UBERON:0003064!4.27e-07!37;UBERON:0005911!8.86e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.05e-16;18!UBERON:0001986;7.05e-16;18!UBERON:0004852;7.05e-16;18!UBERON:0000487;1.18e-14;22!UBERON:0006555;6.65e-13;15!UBERON:0004819;6.65e-13;15!UBERON:0001285;6.65e-13;15!UBERON:0007684;6.65e-13;15!UBERON:0000353;4.01e-12;15!UBERON:0006914;6.09e-12;25!UBERON:0001851;9.67e-12;15!UBERON:0001225;1.63e-11;12!UBERON:0008987;1.63e-11;12!UBERON:0000490;3.79e-11;33!UBERON:0001737;5.75e-09;9!UBERON:0001557;5.75e-09;9!UBERON:0003915;2.43e-08;9!UBERON:0004700;2.43e-08;9!UBERON:0001917;2.43e-08;9!UBERON:0004211;3.28e-08;10!UBERON:0009773;3.28e-08;10!UBERON:0001231;3.28e-08;10!UBERON:0004810;3.28e-08;10!UBERON:0000074;4.97e-08;7!UBERON:0001229;4.97e-08;7!UBERON:0003914;1.65e-07;74!UBERON:0002113;4.98e-07;24!UBERON:0011143;4.98e-07;24 | |||
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| ||
|short_description=p8@S100A16 | |||
}} | }} |
Latest revision as of 06:24, 17 September 2015
Short description: | p8@S100A16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_S100A16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368705_5end |
EntrezGene: | S100A16 |
HGNC: | 20441 |
UniProt: | Q96FQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.79e-36 | 253 |
lining cell | 9.60e-30 | 58 |
barrier cell | 9.60e-30 | 58 |
endothelial cell | 9.46e-26 | 36 |
meso-epithelial cell | 2.41e-25 | 45 |
endothelial cell of vascular tree | 2.04e-21 | 24 |
mesodermal cell | 2.57e-16 | 121 |
blood vessel endothelial cell | 4.11e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.11e-16 | 18 |
embryonic cell | 1.37e-15 | 250 |
epithelial cell of nephron | 5.37e-13 | 15 |
kidney cell | 2.42e-12 | 17 |
kidney epithelial cell | 2.42e-12 | 17 |
squamous epithelial cell | 1.81e-11 | 63 |
kidney cortical cell | 2.01e-11 | 12 |
renal cortical epithelial cell | 2.01e-11 | 12 |
endothelial cell of artery | 1.56e-08 | 9 |
mesothelial cell | 2.20e-08 | 19 |
kidney tubule cell | 2.53e-08 | 10 |
nephron tubule epithelial cell | 2.53e-08 | 10 |
glomerular cell | 5.12e-08 | 7 |
kidney corpuscule cell | 5.12e-08 | 7 |
lymphangioblast | 7.28e-07 | 6 |
endothelial cell of lymphatic vessel | 7.28e-07 | 6 |
vascular lymphangioblast | 7.28e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.10e-15 | 143 |
carcinoma | 4.77e-14 | 106 |
cancer | 1.76e-09 | 235 |
disease of cellular proliferation | 4.60e-09 | 239 |