FF:11207-116A1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005519 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005519 | ||
|HumanCAGEScanFiles=NCig10038;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.NCig10038.11207-116A1.hg19.GCTATA.pairs.bed.gz | |||
|accession_numbers=CAGE;DRX008216;DRR009088;DRZ000513;DRZ001898;DRZ011863;DRZ013248 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037013;DRR041379;DRZ007021 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000947,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0004573,UBERON:0000487,UBERON:0003509,UBERON:0004638,UBERON:0003915,UBERON:0004700,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001917,UBERON:0004535,UBERON:0004571,UBERON:0010191,UBERON:0004572,UBERON:0004537,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:1000413,CL:0002544 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000047,FF:0000048,FF:0000001 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
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XP1;;chr19:58987786..58987805,+!p3@ZNF446!0.19!1.19!ZNF446;;chr1:61547811..61547837,+!p7@NFIA!0.19!1.19!NFIA;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.19!1.19!TGIF2;;chr16:3333375..3333388,+!p3@ZNF263!0.19!1.19!ZNF263;;chr19:4066782..4066802,-!p7@ZBTB7A!0.19!0.99!ZBTB7A;;chr15:96869222..96869251,+!p18@NR2F2!0.19!0.80!NR2F2;;chr17:46622229..46622257,-!p6@HOXB2!0.19!0.80!HOXB2;;chr18:53255839..53255854,-!p13@TCF4!0.19!0.80!TCF4;;chr10:51565188..51565236,+!p1@NCOA4!0.18!101.57!NCOA4;;chr18:3450161..3450183,+!p1@TGIF1!0.18!46.91!TGIF1;;chr17:80477571..80477637,+!p1@FOXK2!0.18!40.75!FOXK2;;chr19:42580274..42580375,+!p1@ZNF574!0.18!15.30!ZNF574;;chr16:3162557..3162600,+!p1@ZNF205!0.18!10.93!ZNF205;;chr12:80084768..80084821,-!p2@PAWR!0.18!8.75!PAWR;;chr11:65686952..65686975,+!p5@DRAP1!0.18!6.76!DRAP1;;chr7:150076406..150076456,+!p1@ZNF775!0.18!5.57!ZNF775;;chr3:48282587..48282603,+!p1@ZNF589!0.18!5.37!ZNF589;;chr12:54019757..54019804,-!p2@ATF7!0.18!4.57!ATF7;;chr17:4890695..4890773,-!p2@CAMTA2!0.18!3.58!CAMTA2;;chr2:42795651..42795676,+!p3@MTA3!0.18!2.78!MTA3;;chr18:51750928..51750942,-!p4@MBD2!0.18!2.58!MBD2;;chrX:129244885..129244926,-!p3@ELF4!0.18!2.58!ELF4;;chr18:5295679..5295734,-!p2@ZFP161!0.18!2.19!ZFP161;;chr19:12512062..12512094,-!p1@ZNF799!0.18!1.99!ZNF799;;chr1:61547781..61547809,+!p5@NFIA!0.18!1.99!NFIA;;chr7:27135591..27135658,-!p1@HOXA1!0.18!1.79!HOXA1;;chr2:85980951..85981004,+!p1@ATOH8!0.18!1.39!ATOH8;;chr19:4066890..4066903,-!p6@ZBTB7A!0.18!1.39!ZBTB7A;;chr1:8763510..8763538,-!p15@RERE!0.18!1.39!RERE;;chr16:3185051..3185068,+!p3@ZNF213!0.18!1.39!ZNF213;;chr7:137686552..137686564,-!p9@CREB3L2!0.18!1.19!CREB3L2;;chr11:129872672..129872695,-!p2@PRDM10!0.18!1.19!PRDM10;;chr1:247171316..247171336,-!p3@ZNF695!0.18!1.19!ZNF695;;chr1:6640110..6640130,+!p2@ZBTB48!0.18!0.99!ZBTB48;;chr8:128747661..128747703,+!p6@MYC!0.18!0.99!MYC;;chr16:1664146..1664187,+!p2@CRAMP1L!0.18!0.99!CRAMP1L;;chr14:105886290..105886299,+!p5@MTA1!0.18!0.99!MTA1;;chr4:1873216..1873238,+!p5@WHSC1!0.18!0.99!WHSC1;;chr8:28748157..28748175,+!p3@HMBOX1!0.18!0.80!HMBOX1;;chr19:50432132..50432217,+!p2@ATF5!0.18!0.80!ATF5;;chr19:58341656..58341694,+!p5@ZNF587!0.18!0.80!ZNF587;;chr13:114238997..114239077,+!p1@TFDP1!0.17!66.98!TFDP1;;chr19:10305581..10305646,-!p1@DNMT1!0.17!45.72!DNMT1;;chr12:56583243..56583293,-!p1@SMARCC2!0.17!32.40!SMARCC2;;chr17:79885576..79885624,-!p1@MAFG!0.17!14.71!MAFG;;chr11:65687158..65687216,+!p4@DRAP1!0.17!6.96!DRAP1;;chr1:45805813..45805859,+!p1@TOE1!0.17!5.37!TOE1;;chr3:71007886..71007887,-!p8@FOXP1!0.17!3.58!FOXP1;;chr2:46524897..46524911,+!p2@EPAS1!0.17!2.98!EPAS1;;chr19:45250948..45250998,+!p3@BCL3!0.17!2.58!BCL3;;chr11:62369383..62369399,-!p6@MTA2!0.17!2.19!MTA2;;chr16:3285049..3285081,-!p3@ZNF200!0.17!2.19!ZNF200;;chr4:87857433..87857472,+!p9@AFF1!0.17!1.59!AFF1;;chr10:21823218..21823240,+!p3@MLLT10!0.17!1.59!MLLT10;;chr1:221052776..221052799,+!p1@HLX!0.17!1.59!HLX;;chr1:247171347..247171366,-!p2@ZNF695!0.17!1.59!ZNF695;;chr1:204042723..204042784,+!p3@SOX13!0.17!1.39!SOX13;;chr19:38042240..38042309,+!p2@ZNF540!0.17!1.19!ZNF540;;chr15:85291372..85291405,+!p3@ZNF592!0.17!0.99!ZNF592;;chr1:120190761..120190782,-!p2@ZNF697!0.17!0.99!ZNF697;;chr19:9785710..9785721,-!p3@ZNF562!0.17!0.80!ZNF562;;chr1:43148029..43148040,+!p7@YBX1!0.17!0.80!YBX1;;chr15:37392576..37392589,-!p12@MEIS2!0.17!0.80!MEIS2;;chr15:77713281..77713290,+!p6@HMG20A!0.17!0.80!HMG20A;;chr17:40719165..40719168,+!p4@MLX!0.17!0.80!MLX;;chr7:21467150..21467172,+!p5@SP4!0.17!0.80!SP4;;chr10:44144187..44144201,-!p3@ZNF32!0.17!0.80!ZNF32;;chr3:71179785..71179810,-!p23@FOXP1!0.17!0.60!FOXP1;;chr12:7079807..7079848,-!p1@PHB2!0.16!238.12!PHB2;;chr6:34204642..34204664,+!p2@HMGA1!0.16!176.30!HMGA1;;chr11:57103327..57103372,-!p1@SSRP1!0.16!62.21!SSRP1;;chr17:40719102..40719141,+!p1@MLX!0.16!41.94!MLX;;chr16:88636795..88636827,+!p1@ZC3H18!0.16!31.21!ZC3H18;;chr11:62369291..62369351,-!p1@MTA2!0.16!24.05!MTA2;;chr2:27805880..27805967,+!p1@ZNF512!0.16!17.49!ZNF512;;chr19:59031131..59031193,-!p1@ZBTB45!0.16!16.50!ZBTB45;;chr2:97202480..97202499,+!p1@ARID5A!0.16!12.72!ARID5A;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.16!11.93!ZNF595;;chr17:4890919..4890985,-!p1@CAMTA2!0.16!11.53!CAMTA2;;chr3:44690211..44690267,+!p1@ZNF35!0.16!10.53!ZNF35;;chr16:30583017..30583064,-!p1@ZNF688!0.16!5.96!ZNF688;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.16!5.57!ZNF20;;chr19:45909594..45909625,-!p2@PPP1R13L!0.16!5.17!PPP1R13L;;chr6:7108569..7108683,+!p3@RREB1!0.16!4.37!RREB1;;chr1:153895251..153895342,-!p2@GATAD2B!0.16!3.98!GATAD2B;;chr19:3359257..3359362,+!p3@NFIC!0.16!3.18!NFIC;;chr15:60884747..60884774,-!p3@RORA!0.16!2.39!RORA;;chr6:41514005..41514026,+!p3@FOXP4!0.16!1.99!FOXP4;;chr15:90544688..90544728,+!p2@ZNF710!0.16!1.59!ZNF710;;chr10:114710060..114710069,+!p5@TCF7L2!0.16!1.39!TCF7L2;;chr11:16759983..16760029,-!p2@SOX6!0.16!1.19!SOX6;;chr16:30798476..30798483,-!p2@ZNF629!0.16!0.80!ZNF629;;chr17:46622440..46622477,-!p5@HOXB2!0.16!0.60!HOXB2;;chr18:3447617..3447633,+!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XP1;;chr19:58987786..58987805,+!p3@ZNF446!0.19!1.19!ZNF446;;chr1:61547811..61547837,+!p7@NFIA!0.19!1.19!NFIA;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.19!1.19!TGIF2;;chr16:3333375..3333388,+!p3@ZNF263!0.19!1.19!ZNF263;;chr19:4066782..4066802,-!p7@ZBTB7A!0.19!0.99!ZBTB7A;;chr15:96869222..96869251,+!p18@NR2F2!0.19!0.80!NR2F2;;chr17:46622229..46622257,-!p6@HOXB2!0.19!0.80!HOXB2;;chr18:53255839..53255854,-!p13@TCF4!0.19!0.80!TCF4;;chr10:51565188..51565236,+!p1@NCOA4!0.18!101.57!NCOA4;;chr18:3450161..3450183,+!p1@TGIF1!0.18!46.91!TGIF1;;chr17:80477571..80477637,+!p1@FOXK2!0.18!40.75!FOXK2;;chr19:42580274..42580375,+!p1@ZNF574!0.18!15.30!ZNF574;;chr16:3162557..3162600,+!p1@ZNF205!0.18!10.93!ZNF205;;chr12:80084768..80084821,-!p2@PAWR!0.18!8.75!PAWR;;chr11:65686952..65686975,+!p5@DRAP1!0.18!6.76!DRAP1;;chr7:150076406..150076456,+!p1@ZNF775!0.18!5.57!ZNF775;;chr3:48282587..48282603,+!p1@ZNF589!0.18!5.37!ZNF589;;chr12:54019757..54019804,-!p2@ATF7!0.18!4.57!ATF7;;chr17:4890695..4890773,-!p2@CAMTA2!0.18!3.58!CAMTA2;;chr2:42795651..42795676,+!p3@MTA3!0.18!2.78!MTA3;;chr18:51750928..51750942,-!p4@MBD2!0.18!2.58!MBD2;;chrX:129244885..129244926,-!p3@ELF4!0.18!2.58!ELF4;;chr18:5295679..5295734,-!p2@ZFP161!0.18!2.19!ZFP161;;chr19:12512062..12512094,-!p1@ZNF799!0.18!1.99!ZNF799;;chr1:61547781..61547809,+!p5@NFIA!0.18!1.99!NFIA;;chr7:27135591..27135658,-!p1@HOXA1!0.18!1.79!HOXA1;;chr2:85980951..85981004,+!p1@ATOH8!0.18!1.39!ATOH8;;chr19:4066890..4066903,-!p6@ZBTB7A!0.18!1.39!ZBTB7A;;chr1:8763510..8763538,-!p15@RERE!0.18!1.39!RERE;;chr16:3185051..3185068,+!p3@ZNF213!0.18!1.39!ZNF213;;chr7:137686552..137686564,-!p9@CREB3L2!0.18!1.19!CREB3L2;;chr11:129872672..129872695,-!p2@PRDM10!0.18!1.19!PRDM10;;chr1:247171316..247171336,-!p3@ZNF695!0.18!1.19!ZNF695;;chr1:6640110..6640130,+!p2@ZBTB48!0.18!0.99!ZBTB48;;chr8:128747661..128747703,+!p6@MYC!0.18!0.99!MYC;;chr16:1664146..1664187,+!p2@CRAMP1L!0.18!0.99!CRAMP1L;;chr14:105886290..105886299,+!p5@MTA1!0.18!0.99!MTA1;;chr4:1873216..1873238,+!p5@WHSC1!0.18!0.99!WHSC1;;chr8:28748157..28748175,+!p3@HMBOX1!0.18!0.80!HMBOX1;;chr19:50432132..50432217,+!p2@ATF5!0.18!0.80!ATF5;;chr19:58341656..58341694,+!p5@ZNF587!0.18!0.80!ZNF587;;chr13:114238997..114239077,+!p1@TFDP1!0.17!66.98!TFDP1;;chr19:10305581..10305646,-!p1@DNMT1!0.17!45.72!DNMT1;;chr12:56583243..56583293,-!p1@SMARCC2!0.17!32.40!SMARCC2;;chr17:79885576..79885624,-!p1@MAFG!0.17!14.71!MAFG;;chr11:65687158..65687216,+!p4@DRAP1!0.17!6.96!DRAP1;;chr1:45805813..45805859,+!p1@TOE1!0.17!5.37!TOE1;;chr3:71007886..71007887,-!p8@FOXP1!0.17!3.58!FOXP1;;chr2:46524897..46524911,+!p2@EPAS1!0.17!2.98!EPAS1;;chr19:45250948..45250998,+!p3@BCL3!0.17!2.58!BCL3;;chr11:62369383..62369399,-!p6@MTA2!0.17!2.19!MTA2;;chr16:3285049..3285081,-!p3@ZNF200!0.17!2.19!ZNF200;;chr4:87857433..87857472,+!p9@AFF1!0.17!1.59!AFF1;;chr10:21823218..21823240,+!p3@MLLT10!0.17!1.59!MLLT10;;chr1:221052776..221052799,+!p1@HLX!0.17!1.59!HLX;;chr1:247171347..247171366,-!p2@ZNF695!0.17!1.59!ZNF695;;chr1:204042723..204042784,+!p3@SOX13!0.17!1.39!SOX13;;chr19:38042240..38042309,+!p2@ZNF540!0.17!1.19!ZNF540;;chr15:85291372..85291405,+!p3@ZNF592!0.17!0.99!ZNF592;;chr1:120190761..120190782,-!p2@ZNF697!0.17!0.99!ZNF697;;chr19:9785710..9785721,-!p3@ZNF562!0.17!0.80!ZNF562;;chr1:43148029..43148040,+!p7@YBX1!0.17!0.80!YBX1;;chr15:37392576..37392589,-!p12@MEIS2!0.17!0.80!MEIS2;;chr15:77713281..77713290,+!p6@HMG20A!0.17!0.80!HMG20A;;chr17:40719165..40719168,+!p4@MLX!0.17!0.80!MLX;;chr7:21467150..21467172,+!p5@SP4!0.17!0.80!SP4;;chr10:44144187..44144201,-!p3@ZNF32!0.17!0.80!ZNF32;;chr3:71179785..71179810,-!p23@FOXP1!0.17!0.60!FOXP1;;chr12:7079807..7079848,-!p1@PHB2!0.16!238.12!PHB2;;chr6:34204642..34204664,+!p2@HMGA1!0.16!176.30!HMGA1;;chr11:57103327..57103372,-!p1@SSRP1!0.16!62.21!SSRP1;;chr17:40719102..40719141,+!p1@MLX!0.16!41.94!MLX;;chr16:88636795..88636827,+!p1@ZC3H18!0.16!31.21!ZC3H18;;chr11:62369291..62369351,-!p1@MTA2!0.16!24.05!MTA2;;chr2:27805880..27805967,+!p1@ZNF512!0.16!17.49!ZNF512;;chr19:59031131..59031193,-!p1@ZBTB45!0.16!16.50!ZBTB45;;chr2:97202480..97202499,+!p1@ARID5A!0.16!12.72!ARID5A;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.16!11.93!ZNF595;;chr17:4890919..4890985,-!p1@CAMTA2!0.16!11.53!CAMTA2;;chr3:44690211..44690267,+!p1@ZNF35!0.16!10.53!ZNF35;;chr16:30583017..30583064,-!p1@ZNF688!0.16!5.96!ZNF688;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.16!5.57!ZNF20;;chr19:45909594..45909625,-!p2@PPP1R13L!0.16!5.17!PPP1R13L;;chr6:7108569..7108683,+!p3@RREB1!0.16!4.37!RREB1;;chr1:153895251..153895342,-!p2@GATAD2B!0.16!3.98!GATAD2B;;chr19:3359257..3359362,+!p3@NFIC!0.16!3.18!NFIC;;chr15:60884747..60884774,-!p3@RORA!0.16!2.39!RORA;;chr6:41514005..41514026,+!p3@FOXP4!0.16!1.99!FOXP4;;chr15:90544688..90544728,+!p2@ZNF710!0.16!1.59!ZNF710;;chr10:114710060..114710069,+!p5@TCF7L2!0.16!1.39!TCF7L2;;chr11:16759983..16760029,-!p2@SOX6!0.16!1.19!SOX6;;chr16:30798476..30798483,-!p2@ZNF629!0.16!0.80!ZNF629;;chr17:46622440..46622477,-!p5@HOXB2!0.16!0.60!HOXB2;;chr18:3447617..3447633,+!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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000071;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000115;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002139;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002544;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:1000413;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000487;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000947;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001637;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001981;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004573;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0006914;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007798 | |||
|ffid_belonging_in_development=CL:0002546,CL:0000222 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 45: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.CNhs10837.11207-116A1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.CNhs10837.11207-116A1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.CNhs10837.11207-116A1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.CNhs10837.11207-116A1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor0.CNhs10837.11207-116A1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11207-116A1 | |id=FF:11207-116A1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000048 | ||
|is_obsolete= | |||
|library_id=CNhs10837 | |||
|library_id_phase_based=2:CNhs10837 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11207 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10003.TGACCA.11207 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11207 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10003.TGACCA.11207 | |||
|name=Endothelial Cells - Aortic, donor0 | |name=Endothelial Cells - Aortic, donor0 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 66: | ||
|profile_cagescan=NCig10038,,, | |profile_cagescan=NCig10038,,, | ||
|profile_hcage=CNhs10837,LSID700,release009,COMPLETED | |profile_hcage=CNhs10837,LSID700,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10003,,, | |profile_srnaseq=SRhi10003,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=CA304-R10a | |rna_catalog_number=CA304-R10a | ||
| Line 56: | Line 83: | ||
|rna_tube_id=116A1 | |rna_tube_id=116A1 | ||
|rna_weight_ug=25 | |rna_weight_ug=25 | ||
|rnaseq_library_id=SRhi10003.TGACCA | |||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 98: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.41768104068653e-245!GO:0043226;organelle;7.79835282887513e-193!GO:0043229;intracellular organelle;1.96040672874136e-192!GO:0005737;cytoplasm;3.8649150952074e-191!GO:0043231;intracellular membrane-bound organelle;1.64696250374315e-185!GO:0043227;membrane-bound organelle;2.806916508249e-185!GO:0044422;organelle part;7.62323475579828e-147!GO:0044446;intracellular organelle part;2.51424024174798e-145!GO:0044444;cytoplasmic part;3.97129236660092e-132!GO:0032991;macromolecular complex;1.60107043447632e-101!GO:0044238;primary metabolic process;3.0852765564555e-90!GO:0044237;cellular metabolic process;3.15644539271872e-90!GO:0030529;ribonucleoprotein complex;8.71804430555198e-86!GO:0043170;macromolecule metabolic process;5.68635783524361e-83!GO:0005515;protein binding;2.81632469648004e-82!GO:0005634;nucleus;1.22824565851162e-76!GO:0043233;organelle lumen;2.94447221324268e-73!GO:0031974;membrane-enclosed lumen;2.94447221324268e-73!GO:0044428;nuclear part;3.68444525905212e-73!GO:0003723;RNA binding;1.16348572767948e-70!GO:0005739;mitochondrion;1.53318451870997e-66!GO:0019538;protein metabolic process;3.42073034542829e-56!GO:0005840;ribosome;2.31062567205927e-53!GO:0043234;protein complex;4.57539052238603e-52!GO:0031090;organelle membrane;7.15073243070322e-51!GO:0006412;translation;7.19107063034496e-51!GO:0044267;cellular protein metabolic process;4.11075691036688e-50!GO:0044260;cellular macromolecule metabolic process;6.41730541035428e-50!GO:0016043;cellular component organization and biogenesis;1.15118631586823e-49!GO:0003735;structural constituent of ribosome;3.34977846023341e-47!GO:0006396;RNA processing;2.1224988473147e-46!GO:0031981;nuclear lumen;2.59346999316328e-45!GO:0043283;biopolymer metabolic process;2.59346999316328e-45!GO:0044429;mitochondrial part;1.1143369104445e-44!GO:0031967;organelle envelope;5.27377012749212e-43!GO:0031975;envelope;1.32038155696337e-42!GO:0005829;cytosol;1.7394028958354e-42!GO:0015031;protein transport;2.54857674160201e-42!GO:0033036;macromolecule localization;1.36134091911795e-41!GO:0009058;biosynthetic process;2.68711228473568e-41!GO:0044249;cellular biosynthetic process;6.88941444784489e-41!GO:0033279;ribosomal subunit;9.52437611105218e-41!GO:0043228;non-membrane-bound organelle;1.9035849628318e-39!GO:0043232;intracellular non-membrane-bound organelle;1.9035849628318e-39!GO:0045184;establishment of protein localization;1.03909981803931e-38!GO:0009059;macromolecule biosynthetic process;1.09929050462282e-38!GO:0008104;protein localization;1.60638592247803e-38!GO:0010467;gene expression;1.44186559269509e-37!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.02642748558674e-36!GO:0006996;organelle organization and biogenesis;2.55900049899708e-36!GO:0016071;mRNA metabolic process;2.31550413248756e-35!GO:0046907;intracellular transport;5.95572012807613e-35!GO:0065003;macromolecular complex assembly;8.94794069000121e-33!GO:0008380;RNA splicing;9.6191371740342e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.73680391156267e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.71749693495165e-31!GO:0006397;mRNA processing;1.01209480061355e-30!GO:0005740;mitochondrial envelope;5.04374170277244e-30!GO:0000166;nucleotide binding;3.37222141266431e-29!GO:0022607;cellular component assembly;5.77105534709813e-29!GO:0006886;intracellular protein transport;1.02841498865913e-28!GO:0031966;mitochondrial membrane;2.40288803141376e-28!GO:0006259;DNA metabolic process;1.68119831461325e-27!GO:0005654;nucleoplasm;2.38119617093561e-27!GO:0019866;organelle inner membrane;4.1138684037396e-26!GO:0007049;cell cycle;4.37267623509636e-25!GO:0044445;cytosolic part;7.8441306357941e-25!GO:0005681;spliceosome;9.44369194026388e-25!GO:0005743;mitochondrial inner membrane;5.30109211109484e-24!GO:0051649;establishment of cellular localization;1.83423150317861e-23!GO:0016462;pyrophosphatase activity;2.12977400724081e-23!GO:0051641;cellular localization;2.40264396358993e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.02710120044678e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;4.34465821818214e-23!GO:0017111;nucleoside-triphosphatase activity;8.96002520907468e-23!GO:0044451;nucleoplasm part;7.77647235294514e-22!GO:0017076;purine nucleotide binding;8.9234753849166e-22!GO:0032553;ribonucleotide binding;9.00109747478741e-22!GO:0032555;purine ribonucleotide binding;9.00109747478741e-22!GO:0012505;endomembrane system;2.40884902499295e-21!GO:0015935;small ribosomal subunit;4.99113867292451e-21!GO:0006119;oxidative phosphorylation;7.83372764117455e-21!GO:0015934;large ribosomal subunit;9.38640362485873e-21!GO:0016874;ligase activity;1.87270357553957e-20!GO:0003676;nucleic acid binding;5.26147989461965e-20!GO:0005730;nucleolus;1.87553182829198e-19!GO:0022402;cell cycle process;4.04509122383015e-19!GO:0006457;protein folding;7.24022530890178e-19!GO:0044455;mitochondrial membrane part;7.72793455258401e-19!GO:0006512;ubiquitin cycle;3.18039837138915e-18!GO:0031980;mitochondrial lumen;3.22144156762783e-18!GO:0005759;mitochondrial matrix;3.22144156762783e-18!GO:0008134;transcription factor binding;3.55366448498476e-18!GO:0022618;protein-RNA complex assembly;7.90297871808024e-18!GO:0044265;cellular macromolecule catabolic process;2.52183018373811e-17!GO:0005524;ATP binding;2.55208549792627e-17!GO:0032559;adenyl ribonucleotide binding;2.63416907395667e-17!GO:0030554;adenyl nucleotide binding;3.67959982644378e-17!GO:0043412;biopolymer modification;5.44388390755485e-17!GO:0000278;mitotic cell cycle;5.49683008549034e-17!GO:0005783;endoplasmic reticulum;6.24883442678598e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.28479007347697e-16!GO:0043285;biopolymer catabolic process;2.09895048859793e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;2.66157678318249e-16!GO:0019941;modification-dependent protein catabolic process;3.81470877912357e-16!GO:0043632;modification-dependent macromolecule catabolic process;3.81470877912357e-16!GO:0048770;pigment granule;4.10499398856887e-16!GO:0042470;melanosome;4.10499398856887e-16!GO:0006511;ubiquitin-dependent protein catabolic process;5.14308934551536e-16!GO:0005794;Golgi apparatus;5.91382751695461e-16!GO:0005746;mitochondrial respiratory chain;6.54654293253977e-16!GO:0000502;proteasome complex (sensu Eukaryota);6.64440107554074e-16!GO:0044257;cellular protein catabolic process;6.95421597876392e-16!GO:0009057;macromolecule catabolic process;1.01601338789099e-15!GO:0006605;protein targeting;1.13915498805582e-15!GO:0006464;protein modification process;1.90568074484568e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.25605830300916e-15!GO:0051186;cofactor metabolic process;5.07441700945853e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.30391866549065e-15!GO:0016192;vesicle-mediated transport;7.49881384489853e-15!GO:0044432;endoplasmic reticulum part;7.90886674862382e-15!GO:0008135;translation factor activity, nucleic acid binding;1.8943930270658e-14!GO:0016070;RNA metabolic process;1.99367103833871e-14!GO:0044248;cellular catabolic process;2.21441741686265e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.53819921086557e-14!GO:0003954;NADH dehydrogenase activity;2.53819921086557e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.53819921086557e-14!GO:0030163;protein catabolic process;2.66867943256091e-14!GO:0005635;nuclear envelope;5.95444745288608e-14!GO:0005761;mitochondrial ribosome;6.46803524443934e-14!GO:0000313;organellar ribosome;6.46803524443934e-14!GO:0042254;ribosome biogenesis and assembly;7.36446827941436e-14!GO:0006974;response to DNA damage stimulus;7.44507412029033e-14!GO:0005694;chromosome;1.66593524260756e-13!GO:0043687;post-translational protein modification;1.70964847738131e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;1.70964847738131e-13!GO:0000375;RNA splicing, via transesterification reactions;1.70964847738131e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.70964847738131e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.88704392761185e-13!GO:0031965;nuclear membrane;2.60290976319996e-13!GO:0051082;unfolded protein binding;3.28883350169041e-13!GO:0048193;Golgi vesicle transport;5.0706760516427e-13!GO:0042623;ATPase activity, coupled;5.16752483450289e-13!GO:0044453;nuclear membrane part;7.49746579909157e-13!GO:0016887;ATPase activity;1.01497918595522e-12!GO:0003712;transcription cofactor activity;1.34365603987474e-12!GO:0000087;M phase of mitotic cell cycle;1.45157600618145e-12!GO:0051276;chromosome organization and biogenesis;1.74224019667967e-12!GO:0007067;mitosis;1.80804556655455e-12!GO:0044427;chromosomal part;2.05157209241048e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.05157209241048e-12!GO:0045271;respiratory chain complex I;2.05157209241048e-12!GO:0005747;mitochondrial respiratory chain complex I;2.05157209241048e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.40826655223389e-12!GO:0042773;ATP synthesis coupled electron transport;2.40826655223389e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.49166997785899e-12!GO:0003743;translation initiation factor activity;7.06005566226367e-12!GO:0022403;cell cycle phase;9.09924598411541e-12!GO:0051726;regulation of cell cycle;9.10382683098111e-12!GO:0006732;coenzyme metabolic process;1.25215858041082e-11!GO:0000074;regulation of progression through cell cycle;1.51016118205157e-11!GO:0051301;cell division;1.52081384030395e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;1.71451496970028e-11!GO:0012501;programmed cell death;2.13284410580784e-11!GO:0006915;apoptosis;2.31641948758237e-11!GO:0008639;small protein conjugating enzyme activity;2.61355976300815e-11!GO:0016604;nuclear body;3.20163757990927e-11!GO:0006281;DNA repair;3.97296019951847e-11!GO:0006413;translational initiation;4.50701611436099e-11!GO:0006913;nucleocytoplasmic transport;4.70914738373044e-11!GO:0004842;ubiquitin-protein ligase activity;5.35302099891934e-11!GO:0009055;electron carrier activity;7.50964783503089e-11!GO:0006323;DNA packaging;8.30531628158032e-11!GO:0051169;nuclear transport;1.12564037733963e-10!GO:0006260;DNA replication;1.21254986639596e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.30646820854788e-10!GO:0019787;small conjugating protein ligase activity;1.3787331837593e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.55138675558027e-10!GO:0009259;ribonucleotide metabolic process;1.57640464612138e-10!GO:0009719;response to endogenous stimulus;1.88651585456332e-10!GO:0006163;purine nucleotide metabolic process;3.52839344092043e-10!GO:0005643;nuclear pore;3.57456630657087e-10!GO:0005789;endoplasmic reticulum membrane;3.70329739835838e-10!GO:0008219;cell death;4.41999545287848e-10!GO:0016265;death;4.41999545287848e-10!GO:0004386;helicase activity;5.09849515428498e-10!GO:0008026;ATP-dependent helicase activity;6.14005793398009e-10!GO:0006399;tRNA metabolic process;6.50654229025268e-10!GO:0005793;ER-Golgi intermediate compartment;7.6357746381754e-10!GO:0008565;protein transporter activity;7.6859219354284e-10!GO:0009150;purine ribonucleotide metabolic process;9.72207790023533e-10!GO:0006446;regulation of translational initiation;1.47334621778758e-09!GO:0016881;acid-amino acid ligase activity;1.57652086713771e-09!GO:0050794;regulation of cellular process;1.61142640721875e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.86521571345816e-09!GO:0006461;protein complex assembly;1.92944006319752e-09!GO:0000785;chromatin;2.24764106765421e-09!GO:0006364;rRNA processing;2.9582196757319e-09!GO:0000279;M phase;3.46072908953058e-09!GO:0065002;intracellular protein transport across a membrane;3.81112609929881e-09!GO:0006164;purine nucleotide biosynthetic process;4.46748179655885e-09!GO:0065004;protein-DNA complex assembly;4.57297349342132e-09!GO:0009260;ribonucleotide biosynthetic process;4.87535699169962e-09!GO:0006333;chromatin assembly or disassembly;5.38522612737524e-09!GO:0048523;negative regulation of cellular process;5.38522612737524e-09!GO:0046930;pore complex;6.23557605247119e-09!GO:0016072;rRNA metabolic process;6.52770853557181e-09!GO:0017038;protein import;7.83970692491865e-09!GO:0009056;catabolic process;8.94166145059515e-09!GO:0015630;microtubule cytoskeleton;1.02234608458852e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.24003523077803e-08!GO:0016607;nuclear speck;1.27330612009257e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.38994204900156e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.57540918299861e-08!GO:0009141;nucleoside triphosphate metabolic process;2.36631286023135e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.67617668395556e-08!GO:0004812;aminoacyl-tRNA ligase activity;2.67617668395556e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.67617668395556e-08!GO:0006366;transcription from RNA polymerase II promoter;2.75813601109038e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.79630744537996e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.00187640163379e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.15190218630354e-08!GO:0009144;purine nucleoside triphosphate metabolic process;3.15190218630354e-08!GO:0009060;aerobic respiration;3.16599192423516e-08!GO:0006793;phosphorus metabolic process;4.47515935889257e-08!GO:0006796;phosphate metabolic process;4.47515935889257e-08!GO:0003924;GTPase activity;4.90953760646599e-08!GO:0050657;nucleic acid transport;5.04408195094044e-08!GO:0051236;establishment of RNA localization;5.04408195094044e-08!GO:0050658;RNA transport;5.04408195094044e-08!GO:0006403;RNA localization;6.07404613422125e-08!GO:0043038;amino acid activation;6.47550305820905e-08!GO:0006418;tRNA aminoacylation for protein translation;6.47550305820905e-08!GO:0043039;tRNA aminoacylation;6.47550305820905e-08!GO:0015986;ATP synthesis coupled proton transport;6.92754895833192e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.92754895833192e-08!GO:0016740;transferase activity;7.39384664514769e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.39735366790639e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.39735366790639e-08!GO:0051188;cofactor biosynthetic process;1.24211335693844e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.25147414800275e-07!GO:0005525;GTP binding;1.32747934789993e-07!GO:0019829;cation-transporting ATPase activity;1.50245200363071e-07!GO:0051246;regulation of protein metabolic process;1.60235960064276e-07!GO:0046034;ATP metabolic process;1.62913524551638e-07!GO:0048519;negative regulation of biological process;1.88118860129291e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.88118860129291e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.88118860129291e-07!GO:0032446;protein modification by small protein conjugation;1.92623911126242e-07!GO:0016567;protein ubiquitination;2.02444920767601e-07!GO:0045333;cellular respiration;2.10170685345188e-07!GO:0006334;nucleosome assembly;2.112495569056e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.24530637167031e-07!GO:0016310;phosphorylation;2.29150115906894e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.07478191518713e-07!GO:0044431;Golgi apparatus part;3.15513349021658e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.39366185430279e-07!GO:0031252;leading edge;3.39366185430279e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.18531691398808e-07!GO:0005788;endoplasmic reticulum lumen;4.62221219922889e-07!GO:0042981;regulation of apoptosis;5.76292515422423e-07!GO:0003724;RNA helicase activity;5.77258258758208e-07!GO:0009117;nucleotide metabolic process;6.4167721201145e-07!GO:0031497;chromatin assembly;6.4167721201145e-07!GO:0043067;regulation of programmed cell death;6.88433353311769e-07!GO:0016779;nucleotidyltransferase activity;8.13991474694361e-07!GO:0016787;hydrolase activity;8.5477380869357e-07!GO:0006754;ATP biosynthetic process;8.81179528221693e-07!GO:0006753;nucleoside phosphate metabolic process;8.81179528221693e-07!GO:0007005;mitochondrion organization and biogenesis;9.78015869185742e-07!GO:0000151;ubiquitin ligase complex;9.81015470657467e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.87842723381139e-07!GO:0005768;endosome;9.91171634663487e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.03127474832798e-06!GO:0045786;negative regulation of progression through cell cycle;1.04505886912927e-06!GO:0003697;single-stranded DNA binding;1.07327078124619e-06!GO:0006099;tricarboxylic acid cycle;1.26883207057872e-06!GO:0046356;acetyl-CoA catabolic process;1.26883207057872e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.29650415555202e-06!GO:0003713;transcription coactivator activity;1.44327445000142e-06!GO:0000245;spliceosome assembly;1.77594601772216e-06!GO:0051028;mRNA transport;1.97885111211778e-06!GO:0007010;cytoskeleton organization and biogenesis;2.10345062410385e-06!GO:0016491;oxidoreductase activity;2.19039389151439e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.33524540053198e-06!GO:0032561;guanyl ribonucleotide binding;2.33524540053198e-06!GO:0019001;guanyl nucleotide binding;2.33524540053198e-06!GO:0043069;negative regulation of programmed cell death;2.4609408178988e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.5048472720641e-06!GO:0051187;cofactor catabolic process;2.57645735145542e-06!GO:0006916;anti-apoptosis;3.10497853094262e-06!GO:0016568;chromatin modification;3.1312048771123e-06!GO:0051170;nuclear import;3.15201100003375e-06!GO:0003714;transcription corepressor activity;3.19247962295216e-06!GO:0006084;acetyl-CoA metabolic process;3.39765458071403e-06!GO:0043066;negative regulation of apoptosis;3.58051055461934e-06!GO:0048475;coated membrane;3.78665373730202e-06!GO:0030117;membrane coat;3.78665373730202e-06!GO:0009108;coenzyme biosynthetic process;4.0218712838753e-06!GO:0016023;cytoplasmic membrane-bound vesicle;4.24213786205226e-06!GO:0031988;membrane-bound vesicle;4.34379757039464e-06!GO:0050789;regulation of biological process;4.34379757039464e-06!GO:0045259;proton-transporting ATP synthase complex;4.44442014610896e-06!GO:0030120;vesicle coat;4.66307444459645e-06!GO:0030662;coated vesicle membrane;4.66307444459645e-06!GO:0005667;transcription factor complex;5.58701347535074e-06!GO:0006752;group transfer coenzyme metabolic process;5.70493228189676e-06!GO:0016469;proton-transporting two-sector ATPase complex;5.99485152467826e-06!GO:0000139;Golgi membrane;6.39909265625897e-06!GO:0006606;protein import into nucleus;7.06337236869992e-06!GO:0043566;structure-specific DNA binding;7.06337236869992e-06!GO:0030029;actin filament-based process;8.89442601994913e-06!GO:0016563;transcription activator activity;8.98146953432789e-06!GO:0009109;coenzyme catabolic process;9.77050828490807e-06!GO:0031968;organelle outer membrane;1.12045258732837e-05!GO:0019867;outer membrane;1.17247767670904e-05!GO:0016853;isomerase activity;1.17880474727911e-05!GO:0005770;late endosome;1.19536496678306e-05!GO:0005813;centrosome;1.24834704588188e-05!GO:0005819;spindle;1.3533807218484e-05!GO:0016564;transcription repressor activity;1.43326815416392e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.54272962494438e-05!GO:0044440;endosomal part;1.57732867437964e-05!GO:0010008;endosome membrane;1.57732867437964e-05!GO:0005769;early endosome;1.61320099723123e-05!GO:0004298;threonine endopeptidase activity;1.7859238762405e-05!GO:0019899;enzyme binding;2.01092644332006e-05!GO:0005762;mitochondrial large ribosomal subunit;2.13451077559605e-05!GO:0000315;organellar large ribosomal subunit;2.13451077559605e-05!GO:0031982;vesicle;2.18303378012932e-05!GO:0008186;RNA-dependent ATPase activity;2.555246071339e-05!GO:0031410;cytoplasmic vesicle;2.69147783484239e-05!GO:0005815;microtubule organizing center;2.89144868060682e-05!GO:0007243;protein kinase cascade;3.19252721755916e-05!GO:0043623;cellular protein complex assembly;3.24808225164102e-05!GO:0006613;cotranslational protein targeting to membrane;3.35181714993125e-05!GO:0045454;cell redox homeostasis;3.38613968300249e-05!GO:0008047;enzyme activator activity;3.45386259750203e-05!GO:0051329;interphase of mitotic cell cycle;4.03239024205987e-05!GO:0003899;DNA-directed RNA polymerase activity;4.14072941502172e-05!GO:0007264;small GTPase mediated signal transduction;4.14610475195007e-05!GO:0051325;interphase;4.3621822221025e-05!GO:0008092;cytoskeletal protein binding;4.52727322511064e-05!GO:0016044;membrane organization and biogenesis;4.95115433787106e-05!GO:0030867;rough endoplasmic reticulum membrane;5.05377487237867e-05!GO:0005741;mitochondrial outer membrane;5.15942304286136e-05!GO:0051427;hormone receptor binding;5.49932113849931e-05!GO:0019843;rRNA binding;5.75508386130773e-05!GO:0004004;ATP-dependent RNA helicase activity;7.7606928698837e-05!GO:0051087;chaperone binding;7.91376344408851e-05!GO:0035257;nuclear hormone receptor binding;0.000121552918822802!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000122093902684833!GO:0048471;perinuclear region of cytoplasm;0.000144862623917196!GO:0008654;phospholipid biosynthetic process;0.000153960529520641!GO:0006091;generation of precursor metabolites and energy;0.000159604864524322!GO:0005096;GTPase activator activity;0.000167829581082098!GO:0005773;vacuole;0.000178504474541271!GO:0005905;coated pit;0.000187172489509439!GO:0033116;ER-Golgi intermediate compartment membrane;0.000194052491890475!GO:0065009;regulation of a molecular function;0.000214723390546478!GO:0048522;positive regulation of cellular process;0.000218333120103645!GO:0016859;cis-trans isomerase activity;0.000234693861406181!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000240680619720014!GO:0005885;Arp2/3 protein complex;0.000267583936919195!GO:0043021;ribonucleoprotein binding;0.000271393538476319!GO:0005048;signal sequence binding;0.000286893363505139!GO:0007051;spindle organization and biogenesis;0.000298287739817247!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000299366527190729!GO:0000786;nucleosome;0.000306025637061302!GO:0008632;apoptotic program;0.000306516418578933!GO:0051168;nuclear export;0.000331770334899336!GO:0009165;nucleotide biosynthetic process;0.000339891503237108!GO:0043681;protein import into mitochondrion;0.000343803272976509!GO:0000059;protein import into nucleus, docking;0.000348639230139668!GO:0000314;organellar small ribosomal subunit;0.000354825664708105!GO:0005763;mitochondrial small ribosomal subunit;0.000354825664708105!GO:0005798;Golgi-associated vesicle;0.000375471487544145!GO:0030880;RNA polymerase complex;0.000397727687334873!GO:0005874;microtubule;0.0004305831374914!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000435413653660196!GO:0015399;primary active transmembrane transporter activity;0.000435413653660196!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000526247644528963!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00058484429202938!GO:0042802;identical protein binding;0.000596611133954149!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000639467008319369!GO:0031324;negative regulation of cellular metabolic process;0.000678328858386982!GO:0006626;protein targeting to mitochondrion;0.000697962318336918!GO:0006612;protein targeting to membrane;0.000767758814686171!GO:0006261;DNA-dependent DNA replication;0.000790372723716005!GO:0008094;DNA-dependent ATPase activity;0.000791403854962713!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000798140565690562!GO:0005657;replication fork;0.000843336067722691!GO:0044452;nucleolar part;0.000888685923122218!GO:0009892;negative regulation of metabolic process;0.000891772063114336!GO:0015980;energy derivation by oxidation of organic compounds;0.000894703868678529!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000902882544355028!GO:0051789;response to protein stimulus;0.000909832542313604!GO:0006986;response to unfolded protein;0.000909832542313604!GO:0065007;biological regulation;0.000915857347274724!GO:0000323;lytic vacuole;0.00095602588745578!GO:0005764;lysosome;0.00095602588745578!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000957939076535971!GO:0000428;DNA-directed RNA polymerase complex;0.000957939076535971!GO:0007006;mitochondrial membrane organization and biogenesis;0.000964343757432045!GO:0015631;tubulin binding;0.00108121552604448!GO:0051920;peroxiredoxin activity;0.00108425109078821!GO:0030027;lamellipodium;0.00108425109078821!GO:0003684;damaged DNA binding;0.00117566905709311!GO:0016363;nuclear matrix;0.00120818525075173!GO:0031072;heat shock protein binding;0.00122587838513469!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00131179758496506!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00134565582233721!GO:0006414;translational elongation;0.00138165468595284!GO:0008033;tRNA processing;0.0015329030551418!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00154412603898316!GO:0006891;intra-Golgi vesicle-mediated transport;0.00163538106053454!GO:0048487;beta-tubulin binding;0.00170400928859925!GO:0000075;cell cycle checkpoint;0.00176064124350123!GO:0000775;chromosome, pericentric region;0.00184710228478945!GO:0019222;regulation of metabolic process;0.00222065922762255!GO:0030695;GTPase regulator activity;0.00222733547687501!GO:0043492;ATPase activity, coupled to movement of substances;0.00224337228062252!GO:0006401;RNA catabolic process;0.00236067467673482!GO:0016126;sterol biosynthetic process;0.00239808177295676!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00240808647578621!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00240808647578621!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00240808647578621!GO:0051252;regulation of RNA metabolic process;0.00243295645276927!GO:0006839;mitochondrial transport;0.00243375506943607!GO:0007242;intracellular signaling cascade;0.00249443147646402!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00249798178649657!GO:0007265;Ras protein signal transduction;0.00253360496600588!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00268553729866332!GO:0005791;rough endoplasmic reticulum;0.00272301751787484!GO:0006695;cholesterol biosynthetic process;0.00277771445117212!GO:0003682;chromatin binding;0.00292721164093221!GO:0044262;cellular carbohydrate metabolic process;0.00302730695874106!GO:0005684;U2-dependent spliceosome;0.00303995620378222!GO:0004674;protein serine/threonine kinase activity;0.00308995872268766!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00309994807566904!GO:0007017;microtubule-based process;0.00310225110901905!GO:0006402;mRNA catabolic process;0.00312866061284731!GO:0017166;vinculin binding;0.00316485364988145!GO:0008139;nuclear localization sequence binding;0.00324040650748102!GO:0035258;steroid hormone receptor binding;0.00325091132693086!GO:0030521;androgen receptor signaling pathway;0.00333689118508452!GO:0015992;proton transport;0.00336042297961338!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00345253375847683!GO:0008361;regulation of cell size;0.00351100466909387!GO:0006818;hydrogen transport;0.00351100466909387!GO:0006950;response to stress;0.00351673285566867!GO:0006383;transcription from RNA polymerase III promoter;0.00360493244893562!GO:0046483;heterocycle metabolic process;0.00368769356767177!GO:0006897;endocytosis;0.00375413806881103!GO:0010324;membrane invagination;0.00375413806881103!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0037874734206368!GO:0032508;DNA duplex unwinding;0.00378772739762093!GO:0032392;DNA geometric change;0.00378772739762093!GO:0050662;coenzyme binding;0.00434747435108943!GO:0016049;cell growth;0.00434747435108943!GO:0005637;nuclear inner membrane;0.0044904139071521!GO:0003729;mRNA binding;0.00457994177940545!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00493903031529261!GO:0001726;ruffle;0.0049949601667902!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0052891717716386!GO:0006289;nucleotide-excision repair;0.00534441042522529!GO:0045941;positive regulation of transcription;0.00542903012719013!GO:0030132;clathrin coat of coated pit;0.00544292986710347!GO:0016197;endosome transport;0.00548949907041451!GO:0050790;regulation of catalytic activity;0.00574542769101774!GO:0043488;regulation of mRNA stability;0.00591660136657704!GO:0043487;regulation of RNA stability;0.00591660136657704!GO:0006352;transcription initiation;0.00594513315191557!GO:0030134;ER to Golgi transport vesicle;0.0060114625906357!GO:0006268;DNA unwinding during replication;0.00606524495394664!GO:0048500;signal recognition particle;0.00609115071853135!GO:0006509;membrane protein ectodomain proteolysis;0.00613266289186842!GO:0033619;membrane protein proteolysis;0.00613266289186842!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00613266289186842!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00613266289186842!GO:0001558;regulation of cell growth;0.00613266289186842!GO:0003779;actin binding;0.00614305535130646!GO:0007050;cell cycle arrest;0.00621519181331827!GO:0030663;COPI coated vesicle membrane;0.00633981496227462!GO:0030126;COPI vesicle coat;0.00633981496227462!GO:0046474;glycerophospholipid biosynthetic process;0.00646845597370799!GO:0006082;organic acid metabolic process;0.0065902872756378!GO:0030041;actin filament polymerization;0.0065902872756378!GO:0000049;tRNA binding;0.00674013555593902!GO:0051540;metal cluster binding;0.00681235005684251!GO:0051536;iron-sulfur cluster binding;0.00681235005684251!GO:0019752;carboxylic acid metabolic process;0.00690413357785733!GO:0016301;kinase activity;0.00698429842314527!GO:0015036;disulfide oxidoreductase activity;0.00712909273435793!GO:0008154;actin polymerization and/or depolymerization;0.00729011707053589!GO:0006611;protein export from nucleus;0.00730037462956724!GO:0030133;transport vesicle;0.00743021979093677!GO:0000082;G1/S transition of mitotic cell cycle;0.00784126404403118!GO:0009967;positive regulation of signal transduction;0.00841346553887683!GO:0000096;sulfur amino acid metabolic process;0.00846700257150182!GO:0016481;negative regulation of transcription;0.00859543195713307!GO:0031902;late endosome membrane;0.00864620424581016!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00867252044903928!GO:0030659;cytoplasmic vesicle membrane;0.00878552577344388!GO:0008180;signalosome;0.00882340179753279!GO:0003678;DNA helicase activity;0.00925857664589664!GO:0046489;phosphoinositide biosynthetic process;0.00928098043290671!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00935209316787545!GO:0045045;secretory pathway;0.00937046282521452!GO:0007088;regulation of mitosis;0.00939546011704699!GO:0030118;clathrin coat;0.00952386779962762!GO:0006405;RNA export from nucleus;0.00962849875281693!GO:0030127;COPII vesicle coat;0.00963345877787534!GO:0012507;ER to Golgi transport vesicle membrane;0.00963345877787534!GO:0045893;positive regulation of transcription, DNA-dependent;0.0100849712572973!GO:0005832;chaperonin-containing T-complex;0.0100849712572973!GO:0005083;small GTPase regulator activity;0.0103963507643122!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.010416600325274!GO:0030658;transport vesicle membrane;0.0107462551815382!GO:0046467;membrane lipid biosynthetic process;0.0110689144429612!GO:0000776;kinetochore;0.0111993721693838!GO:0008312;7S RNA binding;0.0112507441772023!GO:0043022;ribosome binding;0.0116257215917581!GO:0033673;negative regulation of kinase activity;0.0117083069256186!GO:0006469;negative regulation of protein kinase activity;0.0117083069256186!GO:0022415;viral reproductive process;0.0117161269467689!GO:0003711;transcription elongation regulator activity;0.0118820792930483!GO:0005862;muscle thin filament tropomyosin;0.0119633702763659!GO:0047485;protein N-terminus binding;0.0121057244554845!GO:0009116;nucleoside metabolic process;0.0121094386365522!GO:0009112;nucleobase metabolic process;0.0122809469505544!GO:0051539;4 iron, 4 sulfur cluster binding;0.0123234252234483!GO:0043284;biopolymer biosynthetic process;0.0123306513820354!GO:0006740;NADPH regeneration;0.0124288077191993!GO:0006098;pentose-phosphate shunt;0.0124288077191993!GO:0030137;COPI-coated vesicle;0.0124809466709878!GO:0051287;NAD binding;0.0128723364796119!GO:0016251;general RNA polymerase II transcription factor activity;0.0129514118963301!GO:0030176;integral to endoplasmic reticulum membrane;0.013143073575024!GO:0003756;protein disulfide isomerase activity;0.0135283917470407!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0135283917470407!GO:0008022;protein C-terminus binding;0.0137535226197188!GO:0006595;polyamine metabolic process;0.014284561565754!GO:0000287;magnesium ion binding;0.014284561565754!GO:0005774;vacuolar membrane;0.0143172150416507!GO:0005869;dynactin complex;0.0144766318068733!GO:0003690;double-stranded DNA binding;0.0145388001913313!GO:0051348;negative regulation of transferase activity;0.014684766839697!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0147323321950005!GO:0045047;protein targeting to ER;0.0147323321950005!GO:0000209;protein polyubiquitination;0.0151540773511103!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0151891036929506!GO:0031901;early endosome membrane;0.0152754071848088!GO:0006302;double-strand break repair;0.0154736812778871!GO:0006778;porphyrin metabolic process;0.015502786290208!GO:0033013;tetrapyrrole metabolic process;0.015502786290208!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0156550985949105!GO:0008234;cysteine-type peptidase activity;0.0157008599917534!GO:0004518;nuclease activity;0.0159905035398256!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0162719921611053!GO:0032984;macromolecular complex disassembly;0.0166411099407857!GO:0051101;regulation of DNA binding;0.0168988677299962!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0169470229927838!GO:0015002;heme-copper terminal oxidase activity;0.0169470229927838!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0169470229927838!GO:0004129;cytochrome-c oxidase activity;0.0169470229927838!GO:0006284;base-excision repair;0.0170532821763518!GO:0006520;amino acid metabolic process;0.0171009258288147!GO:0051128;regulation of cellular component organization and biogenesis;0.0172125353923604!GO:0048660;regulation of smooth muscle cell proliferation;0.0172556381493344!GO:0007021;tubulin folding;0.0172556381493344!GO:0043624;cellular protein complex disassembly;0.0172556381493344!GO:0007034;vacuolar transport;0.0176749704554552!GO:0000910;cytokinesis;0.017740133004842!GO:0007093;mitotic cell cycle checkpoint;0.017740133004842!GO:0004527;exonuclease activity;0.0180112741899339!GO:0007052;mitotic spindle organization and biogenesis;0.0185284075916674!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0186603790531473!GO:0044433;cytoplasmic vesicle part;0.0186904193276205!GO:0043241;protein complex disassembly;0.0186904193276205!GO:0043086;negative regulation of catalytic activity;0.0195935471219475!GO:0030660;Golgi-associated vesicle membrane;0.0200146306904003!GO:0004177;aminopeptidase activity;0.0206275859399756!GO:0006376;mRNA splice site selection;0.0206866296708371!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0206866296708371!GO:0009966;regulation of signal transduction;0.0208975054407484!GO:0000339;RNA cap binding;0.0211536947091838!GO:0031124;mRNA 3'-end processing;0.0211998553775194!GO:0048518;positive regulation of biological process;0.0212710857569792!GO:0035035;histone acetyltransferase binding;0.0215472883064447!GO:0051098;regulation of binding;0.0215472883064447!GO:0006497;protein amino acid lipidation;0.0218379905400715!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0218430554038749!GO:0008538;proteasome activator activity;0.0218430554038749!GO:0043189;H4/H2A histone acetyltransferase complex;0.0218430554038749!GO:0042168;heme metabolic process;0.0219182395493424!GO:0016741;transferase activity, transferring one-carbon groups;0.0222964091635324!GO:0009303;rRNA transcription;0.022471671148719!GO:0022408;negative regulation of cell-cell adhesion;0.02249030387275!GO:0030833;regulation of actin filament polymerization;0.0229753333129497!GO:0050681;androgen receptor binding;0.023241894895908!GO:0000922;spindle pole;0.0232568926627786!GO:0006338;chromatin remodeling;0.0232568926627786!GO:0035267;NuA4 histone acetyltransferase complex;0.0232568926627786!GO:0006007;glucose catabolic process;0.0232568926627786!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0232568926627786!GO:0007266;Rho protein signal transduction;0.0237029526951825!GO:0022890;inorganic cation transmembrane transporter activity;0.0238716374905031!GO:0005669;transcription factor TFIID complex;0.023893184264826!GO:0016584;nucleosome positioning;0.0240579217589979!GO:0031625;ubiquitin protein ligase binding;0.0243878326652289!GO:0030145;manganese ion binding;0.0245710728526102!GO:0008250;oligosaccharyl transferase complex;0.0247886783844094!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0248483478038095!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0249715380997408!GO:0008652;amino acid biosynthetic process;0.0253408353880531!GO:0008168;methyltransferase activity;0.0253408353880531!GO:0008637;apoptotic mitochondrial changes;0.0253905048051497!GO:0030518;steroid hormone receptor signaling pathway;0.0254993181387531!GO:0030119;AP-type membrane coat adaptor complex;0.025684301354003!GO:0016408;C-acyltransferase activity;0.0257720402667646!GO:0006310;DNA recombination;0.0271239630493132!GO:0019904;protein domain specific binding;0.0271239630493132!GO:0003746;translation elongation factor activity;0.0280236794032005!GO:0031529;ruffle organization and biogenesis;0.0281216610713562!GO:0022411;cellular component disassembly;0.0282065409203173!GO:0006118;electron transport;0.0284525069937874!GO:0005092;GDP-dissociation inhibitor activity;0.0291315172020913!GO:0044437;vacuolar part;0.0294343654320646!GO:0033559;unsaturated fatty acid metabolic process;0.0297169156884108!GO:0006636;unsaturated fatty acid biosynthetic process;0.0297169156884108!GO:0006378;mRNA polyadenylation;0.030176202138555!GO:0005099;Ras GTPase activator activity;0.0304201617284584!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0307090472032803!GO:0005680;anaphase-promoting complex;0.0309474254602245!GO:0006144;purine base metabolic process;0.0310104543330532!GO:0005876;spindle microtubule;0.0314217291376594!GO:0012506;vesicle membrane;0.0316177932248802!GO:0008017;microtubule binding;0.0316922482033979!GO:0006417;regulation of translation;0.0323841085425546!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0331459841932096!GO:0004576;oligosaccharyl transferase activity;0.0333469347773318!GO:0007346;regulation of progression through mitotic cell cycle;0.0339578375987136!GO:0005784;translocon complex;0.03446562240807!GO:0006650;glycerophospholipid metabolic process;0.0344858988340532!GO:0008629;induction of apoptosis by intracellular signals;0.034534495104268!GO:0000123;histone acetyltransferase complex;0.0346259457875301!GO:0005765;lysosomal membrane;0.034638144113053!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0346921111143862!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0346921111143862!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0347978592280001!GO:0030131;clathrin adaptor complex;0.0352187899102271!GO:0009066;aspartate family amino acid metabolic process;0.0353743340965717!GO:0042393;histone binding;0.0359062758522168!GO:0001953;negative regulation of cell-matrix adhesion;0.0366141247774146!GO:0008610;lipid biosynthetic process;0.0368564419107392!GO:0050811;GABA receptor binding;0.0368564419107392!GO:0009124;nucleoside monophosphate biosynthetic process;0.0368564419107392!GO:0009123;nucleoside monophosphate metabolic process;0.0368564419107392!GO:0046209;nitric oxide metabolic process;0.0368564419107392!GO:0006809;nitric oxide biosynthetic process;0.0368564419107392!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0368619840877578!GO:0000152;nuclear ubiquitin ligase complex;0.0368619840877578!GO:0048037;cofactor binding;0.0377442683281569!GO:0031272;regulation of pseudopodium formation;0.0379779508926748!GO:0031269;pseudopodium formation;0.0379779508926748!GO:0031344;regulation of cell projection organization and biogenesis;0.0379779508926748!GO:0031268;pseudopodium organization and biogenesis;0.0379779508926748!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0379779508926748!GO:0031274;positive regulation of pseudopodium formation;0.0379779508926748!GO:0031418;L-ascorbic acid binding;0.0379883619621916!GO:0040008;regulation of growth;0.0381213267119766!GO:0022406;membrane docking;0.0382726359010835!GO:0048278;vesicle docking;0.0382726359010835!GO:0006790;sulfur metabolic process;0.0382726359010835!GO:0005856;cytoskeleton;0.0385148278550013!GO:0030496;midbody;0.0385669361245896!GO:0004003;ATP-dependent DNA helicase activity;0.0394440260532888!GO:0016272;prefoldin complex;0.0400374987534678!GO:0045792;negative regulation of cell size;0.0406372285480365!GO:0005100;Rho GTPase activator activity;0.0416941550273167!GO:0008536;Ran GTPase binding;0.0420847161594559!GO:0043065;positive regulation of apoptosis;0.0426238029575251!GO:0009889;regulation of biosynthetic process;0.0426238029575251!GO:0048468;cell development;0.0426444510028658!GO:0043596;nuclear replication fork;0.0426564811808993!GO:0030911;TPR domain binding;0.0427079024686142!GO:0016407;acetyltransferase activity;0.0427079024686142!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0427079024686142!GO:0006739;NADP metabolic process;0.0427079024686142!GO:0006807;nitrogen compound metabolic process;0.0427442850980044!GO:0006979;response to oxidative stress;0.0429463085300578!GO:0004680;casein kinase activity;0.0437218833630556!GO:0018196;peptidyl-asparagine modification;0.0437218833630556!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0437218833630556!GO:0048659;smooth muscle cell proliferation;0.0441453275056659!GO:0004197;cysteine-type endopeptidase activity;0.0443264459045677!GO:0030308;negative regulation of cell growth;0.0444753433017568!GO:0042158;lipoprotein biosynthetic process;0.0454272485859168!GO:0030384;phosphoinositide metabolic process;0.0458919578344686!GO:0043281;regulation of caspase activity;0.0459944587232056!GO:0042770;DNA damage response, signal transduction;0.0464959655072786!GO:0046128;purine ribonucleoside metabolic process;0.0470210424503783!GO:0042278;purine nucleoside metabolic process;0.0470210424503783!GO:0043068;positive regulation of programmed cell death;0.0474038482737528!GO:0006516;glycoprotein catabolic process;0.0478702153622791!GO:0030032;lamellipodium biogenesis;0.0481212055982056!GO:0030031;cell projection biogenesis;0.0485996167405733 | |||
|sample_id=11207 | |sample_id=11207 | ||
|sample_note=machine failed, remainder reloaded, low amount | |sample_note=machine failed, remainder reloaded, low amount | ||
| Line 76: | Line 106: | ||
|sample_tissue=aorta | |sample_tissue=aorta | ||
|top_motifs=SOX{8,9,10}:1.95206185597;NFATC1..3:1.32395005182;SOX2:1.24390842708;RXR{A,B,G}:1.17150101813;ELF1,2,4:1.07752730354;SOX5:1.06398591378;FOX{I1,J2}:1.05943654225;POU3F1..4:1.0282875008;GATA6:1.00565210104;TLX1..3_NFIC{dimer}:0.967999008093;PAX6:0.948385935036;HBP1_HMGB_SSRP1_UBTF:0.832239425385;ETS1,2:0.806967774737;CRX:0.791119828517;TFDP1:0.762054502617;PAX8:0.756806659672;NANOG:0.732217225491;TFAP4:0.701241971642;AR:0.644084665528;ADNP_IRX_SIX_ZHX:0.609586772378;IKZF1:0.601053677276;PAX1,9:0.593731848669;bHLH_family:0.591447338388;MYB:0.583406934718;XCPE1{core}:0.573998209265;SOX17:0.573522121938;LHX3,4:0.568326333661;SPIB:0.546896979861;TP53:0.545102711302;ZNF148:0.540178655429;GFI1B:0.538329425126;LEF1_TCF7_TCF7L1,2:0.524689310324;PBX1:0.523017596385;GTF2A1,2:0.492799810745;NFE2:0.454234620929;NFE2L2:0.425444335926;NFY{A,B,C}:0.417065841193;HAND1,2:0.39883775652;ALX1:0.393091262646;TFAP2{A,C}:0.390489334675;E2F1..5:0.380067993147;ZFP161:0.378792309639;HES1:0.370573636713;BACH2:0.370135650248;HOX{A5,B5}:0.36785401366;ONECUT1,2:0.363932719603;FOS_FOS{B,L1}_JUN{B,D}:0.355393213051;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.31677358542;ZNF238:0.312520946778;FOXA2:0.309667034209;POU1F1:0.306834615357;YY1:0.306307457262;CDC5L:0.296269692659;NKX2-2,8:0.2642162575;GFI1:0.253637391355;PITX1..3:0.253138530151;NR3C1:0.249200356922;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.237909957499;MTE{core}:0.232703298846;ZNF143:0.231770755117;TFAP2B:0.213039800165;FOSL2:0.204391030096;IKZF2:0.194048282202;ARID5B:0.171268483938;TEAD1:0.162819831242;SP1:0.161558877623;HIC1:0.155960110527;SRF:0.152795445289;NR5A1,2:0.147866380192;RORA:0.128446409748;MYOD1:0.117169390544;STAT5{A,B}:0.0914063152586;NRF1:0.0750363713901;STAT2,4,6:0.0711058986065;NFE2L1:0.0674516989564;RBPJ:0.0649489849733;ZNF423:0.0449416984109;TBP:0.0431321253974;EN1,2:0.0426069009608;FOXM1:0.0234420570787;FOXD3:-0.00671609925218;NHLH1,2:-0.0134840988715;TLX2:-0.0216404255828;PAX2:-0.0318913532253;TAL1_TCF{3,4,12}:-0.0346062527078;POU2F1..3:-0.0357298055589;REST:-0.0463562329259;GTF2I:-0.0556076135793;CUX2:-0.0683662663468;SPI1:-0.0755323729907;HNF4A_NR2F1,2:-0.0804512781511;CEBPA,B_DDIT3:-0.0821461303834;ATF2:-0.0827606369216;ZBTB6:-0.0944149391147;MEF2{A,B,C,D}:-0.0959678332747;STAT1,3:-0.105135194579;MAZ:-0.113574695466;PAX5:-0.121351010728;EGR1..3:-0.122087588446;GLI1..3:-0.128446057796;PAX3,7:-0.142315606395;FOXL1:-0.152564484582;ESRRA:-0.163500613781;SPZ1:-0.163887666148;ELK1,4_GABP{A,B1}:-0.170388870066;HMGA1,2:-0.175168817316;NFIX:-0.177784884164;SMAD1..7,9:-0.182703052227;GATA4:-0.192063550806;HNF1A:-0.195644800714;MED-1{core}:-0.213384257275;PRDM1:-0.21341198437;ATF6:-0.219985783708;LMO2:-0.221171545999;NKX3-2:-0.224299921399;ZIC1..3:-0.238996214748;DMAP1_NCOR{1,2}_SMARC:-0.241718810028;VSX1,2:-0.247213056783;GZF1:-0.258359547631;JUN:-0.271108341177;PATZ1:-0.279163045595;PRRX1,2:-0.302486053653;HLF:-0.305001269017;GCM1,2:-0.319714657799;NFKB1_REL_RELA:-0.329546683001;TFCP2:-0.331550836696;RFX1:-0.333016778021;OCT4_SOX2{dimer}:-0.338198314643;MTF1:-0.338873254168;NANOG{mouse}:-0.343095077419;MYBL2:-0.353356420689;POU5F1:-0.355937804915;EBF1:-0.356586490934;KLF4:-0.370065554078;HSF1,2:-0.390500416769;MZF1:-0.39557420124;RUNX1..3:-0.399166638711;FOXO1,3,4:-0.405811585618;BREu{core}:-0.419789638858;SREBF1,2:-0.434093119118;EP300:-0.465487732753;PPARG:-0.473004896233;FOX{F1,F2,J1}:-0.477875760872;HIF1A:-0.4964497301;UFEwm:-0.507390402123;FOX{D1,D2}:-0.508991352341;MAFB:-0.512873564379;NKX2-3_NKX2-5:-0.516955037296;IRF1,2:-0.517968189909;IRF7:-0.523025956932;EVI1:-0.530912405129;SNAI1..3:-0.535176761859;TBX4,5:-0.58125859178;CREB1:-0.583864625279;FOXP1:-0.596623652321;ZNF384:-0.613212918346;TGIF1:-0.613729188502;RREB1:-0.61470801603;HOX{A6,A7,B6,B7}:-0.616013339456;TEF:-0.62421614943;AHR_ARNT_ARNT2:-0.625137085212;PAX4:-0.647649636176;BPTF:-0.660473247063;DBP:-0.662448786139;HMX1:-0.6948410309;HOXA9_MEIS1:-0.697038405636;NFIL3:-0.706839871844;MYFfamily:-0.712134003179;ATF4:-0.734554210612;ALX4:-0.738633614638;FOXN1:-0.755410846053;FOXQ1:-0.76641933508;ZEB1:-0.779436281274;ATF5_CREB3:-0.785629973878;AIRE:-0.80218532684;XBP1:-0.808125729968;TOPORS:-0.863750653425;POU6F1:-0.883667996602;FOXP3:-0.913138561448;ESR1:-0.927157824706;NR6A1:-0.941763332456;NR1H4:-0.999846967565;RXRA_VDR{dimer}:-1.05918493464;T:-1.07072441464;RFX2..5_RFXANK_RFXAP:-1.11967182918;HOX{A4,D4}:-1.182953808;NKX6-1,2:-1.18958273596;ZBTB16:-1.19352753515;PDX1:-1.23907049562;NKX3-1:-1.24051441062;CDX1,2,4:-1.51890610551;NKX2-1,4:-1.76804491249 | |top_motifs=SOX{8,9,10}:1.95206185597;NFATC1..3:1.32395005182;SOX2:1.24390842708;RXR{A,B,G}:1.17150101813;ELF1,2,4:1.07752730354;SOX5:1.06398591378;FOX{I1,J2}:1.05943654225;POU3F1..4:1.0282875008;GATA6:1.00565210104;TLX1..3_NFIC{dimer}:0.967999008093;PAX6:0.948385935036;HBP1_HMGB_SSRP1_UBTF:0.832239425385;ETS1,2:0.806967774737;CRX:0.791119828517;TFDP1:0.762054502617;PAX8:0.756806659672;NANOG:0.732217225491;TFAP4:0.701241971642;AR:0.644084665528;ADNP_IRX_SIX_ZHX:0.609586772378;IKZF1:0.601053677276;PAX1,9:0.593731848669;bHLH_family:0.591447338388;MYB:0.583406934718;XCPE1{core}:0.573998209265;SOX17:0.573522121938;LHX3,4:0.568326333661;SPIB:0.546896979861;TP53:0.545102711302;ZNF148:0.540178655429;GFI1B:0.538329425126;LEF1_TCF7_TCF7L1,2:0.524689310324;PBX1:0.523017596385;GTF2A1,2:0.492799810745;NFE2:0.454234620929;NFE2L2:0.425444335926;NFY{A,B,C}:0.417065841193;HAND1,2:0.39883775652;ALX1:0.393091262646;TFAP2{A,C}:0.390489334675;E2F1..5:0.380067993147;ZFP161:0.378792309639;HES1:0.370573636713;BACH2:0.370135650248;HOX{A5,B5}:0.36785401366;ONECUT1,2:0.363932719603;FOS_FOS{B,L1}_JUN{B,D}:0.355393213051;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.31677358542;ZNF238:0.312520946778;FOXA2:0.309667034209;POU1F1:0.306834615357;YY1:0.306307457262;CDC5L:0.296269692659;NKX2-2,8:0.2642162575;GFI1:0.253637391355;PITX1..3:0.253138530151;NR3C1:0.249200356922;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.237909957499;MTE{core}:0.232703298846;ZNF143:0.231770755117;TFAP2B:0.213039800165;FOSL2:0.204391030096;IKZF2:0.194048282202;ARID5B:0.171268483938;TEAD1:0.162819831242;SP1:0.161558877623;HIC1:0.155960110527;SRF:0.152795445289;NR5A1,2:0.147866380192;RORA:0.128446409748;MYOD1:0.117169390544;STAT5{A,B}:0.0914063152586;NRF1:0.0750363713901;STAT2,4,6:0.0711058986065;NFE2L1:0.0674516989564;RBPJ:0.0649489849733;ZNF423:0.0449416984109;TBP:0.0431321253974;EN1,2:0.0426069009608;FOXM1:0.0234420570787;FOXD3:-0.00671609925218;NHLH1,2:-0.0134840988715;TLX2:-0.0216404255828;PAX2:-0.0318913532253;TAL1_TCF{3,4,12}:-0.0346062527078;POU2F1..3:-0.0357298055589;REST:-0.0463562329259;GTF2I:-0.0556076135793;CUX2:-0.0683662663468;SPI1:-0.0755323729907;HNF4A_NR2F1,2:-0.0804512781511;CEBPA,B_DDIT3:-0.0821461303834;ATF2:-0.0827606369216;ZBTB6:-0.0944149391147;MEF2{A,B,C,D}:-0.0959678332747;STAT1,3:-0.105135194579;MAZ:-0.113574695466;PAX5:-0.121351010728;EGR1..3:-0.122087588446;GLI1..3:-0.128446057796;PAX3,7:-0.142315606395;FOXL1:-0.152564484582;ESRRA:-0.163500613781;SPZ1:-0.163887666148;ELK1,4_GABP{A,B1}:-0.170388870066;HMGA1,2:-0.175168817316;NFIX:-0.177784884164;SMAD1..7,9:-0.182703052227;GATA4:-0.192063550806;HNF1A:-0.195644800714;MED-1{core}:-0.213384257275;PRDM1:-0.21341198437;ATF6:-0.219985783708;LMO2:-0.221171545999;NKX3-2:-0.224299921399;ZIC1..3:-0.238996214748;DMAP1_NCOR{1,2}_SMARC:-0.241718810028;VSX1,2:-0.247213056783;GZF1:-0.258359547631;JUN:-0.271108341177;PATZ1:-0.279163045595;PRRX1,2:-0.302486053653;HLF:-0.305001269017;GCM1,2:-0.319714657799;NFKB1_REL_RELA:-0.329546683001;TFCP2:-0.331550836696;RFX1:-0.333016778021;OCT4_SOX2{dimer}:-0.338198314643;MTF1:-0.338873254168;NANOG{mouse}:-0.343095077419;MYBL2:-0.353356420689;POU5F1:-0.355937804915;EBF1:-0.356586490934;KLF4:-0.370065554078;HSF1,2:-0.390500416769;MZF1:-0.39557420124;RUNX1..3:-0.399166638711;FOXO1,3,4:-0.405811585618;BREu{core}:-0.419789638858;SREBF1,2:-0.434093119118;EP300:-0.465487732753;PPARG:-0.473004896233;FOX{F1,F2,J1}:-0.477875760872;HIF1A:-0.4964497301;UFEwm:-0.507390402123;FOX{D1,D2}:-0.508991352341;MAFB:-0.512873564379;NKX2-3_NKX2-5:-0.516955037296;IRF1,2:-0.517968189909;IRF7:-0.523025956932;EVI1:-0.530912405129;SNAI1..3:-0.535176761859;TBX4,5:-0.58125859178;CREB1:-0.583864625279;FOXP1:-0.596623652321;ZNF384:-0.613212918346;TGIF1:-0.613729188502;RREB1:-0.61470801603;HOX{A6,A7,B6,B7}:-0.616013339456;TEF:-0.62421614943;AHR_ARNT_ARNT2:-0.625137085212;PAX4:-0.647649636176;BPTF:-0.660473247063;DBP:-0.662448786139;HMX1:-0.6948410309;HOXA9_MEIS1:-0.697038405636;NFIL3:-0.706839871844;MYFfamily:-0.712134003179;ATF4:-0.734554210612;ALX4:-0.738633614638;FOXN1:-0.755410846053;FOXQ1:-0.76641933508;ZEB1:-0.779436281274;ATF5_CREB3:-0.785629973878;AIRE:-0.80218532684;XBP1:-0.808125729968;TOPORS:-0.863750653425;POU6F1:-0.883667996602;FOXP3:-0.913138561448;ESR1:-0.927157824706;NR6A1:-0.941763332456;NR1H4:-0.999846967565;RXRA_VDR{dimer}:-1.05918493464;T:-1.07072441464;RFX2..5_RFXANK_RFXAP:-1.11967182918;HOX{A4,D4}:-1.182953808;NKX6-1,2:-1.18958273596;ZBTB16:-1.19352753515;PDX1:-1.23907049562;NKX3-1:-1.24051441062;CDX1,2,4:-1.51890610551;NKX2-1,4:-1.76804491249 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11207-116A1;search_select_hide=table117:FF:11207-116A1 | |||
}} | }} | ||
Latest revision as of 16:24, 3 June 2020
| Name: | Endothelial Cells - Aortic, donor0 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10837 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10837
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10837
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.724 |
| 10 | 10 | 0.679 |
| 100 | 100 | 0.692 |
| 101 | 101 | 0.0941 |
| 102 | 102 | 0.871 |
| 103 | 103 | 0.661 |
| 104 | 104 | 0.908 |
| 105 | 105 | 0.95 |
| 106 | 106 | 0.932 |
| 107 | 107 | 0.182 |
| 108 | 108 | 0.972 |
| 109 | 109 | 0.201 |
| 11 | 11 | 0.501 |
| 110 | 110 | 0.0279 |
| 111 | 111 | 0.859 |
| 112 | 112 | 0.522 |
| 113 | 113 | 0.131 |
| 114 | 114 | 0.796 |
| 115 | 115 | 0.189 |
| 116 | 116 | 0.588 |
| 117 | 117 | 0.568 |
| 118 | 118 | 0.981 |
| 119 | 119 | 0.644 |
| 12 | 12 | 0.268 |
| 120 | 120 | 0.132 |
| 121 | 121 | 0.323 |
| 122 | 122 | 0.452 |
| 123 | 123 | 0.0247 |
| 124 | 124 | 0.0518 |
| 125 | 125 | 0.429 |
| 126 | 126 | 0.519 |
| 127 | 127 | 0.803 |
| 128 | 128 | 0.358 |
| 129 | 129 | 0.487 |
| 13 | 13 | 0.257 |
| 130 | 130 | 0.179 |
| 131 | 131 | 0.91 |
| 132 | 132 | 0.938 |
| 133 | 133 | 0.401 |
| 134 | 134 | 0.94 |
| 135 | 135 | 0.239 |
| 136 | 136 | 0.0517 |
| 137 | 137 | 0.348 |
| 138 | 138 | 0.815 |
| 139 | 139 | 0.215 |
| 14 | 14 | 0.365 |
| 140 | 140 | 0.856 |
| 141 | 141 | 0.475 |
| 142 | 142 | 0.71 |
| 143 | 143 | 0.314 |
| 144 | 144 | 0.403 |
| 145 | 145 | 0.226 |
| 146 | 146 | 0.169 |
| 147 | 147 | 0.541 |
| 148 | 148 | 0.0169 |
| 149 | 149 | 0.271 |
| 15 | 15 | 0.887 |
| 150 | 150 | 0.178 |
| 151 | 151 | 0.732 |
| 152 | 152 | 0.0285 |
| 153 | 153 | 0.238 |
| 154 | 154 | 0.857 |
| 155 | 155 | 0.191 |
| 156 | 156 | 0.0728 |
| 157 | 157 | 0.0172 |
| 158 | 158 | 0.106 |
| 159 | 159 | 0.427 |
| 16 | 16 | 0.679 |
| 160 | 160 | 0.216 |
| 161 | 161 | 0.0821 |
| 162 | 162 | 0.334 |
| 163 | 163 | 0.499 |
| 164 | 164 | 0.783 |
| 165 | 165 | 0.599 |
| 166 | 166 | 0.52 |
| 167 | 167 | 0.173 |
| 168 | 168 | 0.219 |
| 169 | 169 | 0.282 |
| 17 | 17 | 0.507 |
| 18 | 18 | 0.758 |
| 19 | 19 | 0.405 |
| 2 | 2 | 0.682 |
| 20 | 20 | 0.244 |
| 21 | 21 | 0.492 |
| 22 | 22 | 0.62 |
| 23 | 23 | 0.583 |
| 24 | 24 | 0.334 |
| 25 | 25 | 0.296 |
| 26 | 26 | 0.574 |
| 27 | 27 | 0.427 |
| 28 | 28 | 0.21 |
| 29 | 29 | 0.819 |
| 3 | 3 | 0.551 |
| 30 | 30 | 0.905 |
| 31 | 31 | 0.38 |
| 32 | 32 | 0.0622 |
| 33 | 33 | 0.146 |
| 34 | 34 | 0.186 |
| 35 | 35 | 0.0367 |
| 36 | 36 | 0.0748 |
| 37 | 37 | 0.457 |
| 38 | 38 | 0.341 |
| 39 | 39 | 0.52 |
| 4 | 4 | 0.719 |
| 40 | 40 | 0.011 |
| 41 | 41 | 0.136 |
| 42 | 42 | 0.738 |
| 43 | 43 | 0.292 |
| 44 | 44 | 0.0893 |
| 45 | 45 | 0.364 |
| 46 | 46 | 0.985 |
| 47 | 47 | 0.486 |
| 48 | 48 | 0.102 |
| 49 | 49 | 0.359 |
| 5 | 5 | 0.789 |
| 50 | 50 | 0.507 |
| 51 | 51 | 0.434 |
| 52 | 52 | 0.244 |
| 53 | 53 | 0.463 |
| 54 | 54 | 0.964 |
| 55 | 55 | 0.184 |
| 56 | 56 | 0.936 |
| 57 | 57 | 0.334 |
| 58 | 58 | 0.0365 |
| 59 | 59 | 0.976 |
| 6 | 6 | 0.159 |
| 60 | 60 | 0.285 |
| 61 | 61 | 0.964 |
| 62 | 62 | 0.16 |
| 63 | 63 | 0.558 |
| 64 | 64 | 0.757 |
| 65 | 65 | 0.893 |
| 66 | 66 | 0.014 |
| 67 | 67 | 0.845 |
| 68 | 68 | 0.325 |
| 69 | 69 | 0.955 |
| 7 | 7 | 0.543 |
| 70 | 70 | 0.0495 |
| 71 | 71 | 0.688 |
| 72 | 72 | 0.225 |
| 73 | 73 | 3.55325e-4 |
| 74 | 74 | 0.108 |
| 75 | 75 | 0.417 |
| 76 | 76 | 0.879 |
| 77 | 77 | 0.681 |
| 78 | 78 | 0.637 |
| 79 | 79 | 0.561 |
| 8 | 8 | 0.162 |
| 80 | 80 | 0.295 |
| 81 | 81 | 0.217 |
| 82 | 82 | 0.107 |
| 83 | 83 | 0.444 |
| 84 | 84 | 0.892 |
| 85 | 85 | 0.0291 |
| 86 | 86 | 0.756 |
| 87 | 87 | 0.0265 |
| 88 | 88 | 0.884 |
| 89 | 89 | 0.899 |
| 9 | 9 | 0.499 |
| 90 | 90 | 0.333 |
| 91 | 91 | 0.705 |
| 92 | 92 | 0.34 |
| 93 | 93 | 0.991 |
| 94 | 94 | 0.253 |
| 95 | 95 | 0.153 |
| 96 | 96 | 0.746 |
| 97 | 97 | 0.423 |
| 98 | 98 | 0.908 |
| 99 | 99 | 0.0395 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10837
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000048 human endothelial cell of the aorta sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
1000413 (endothelial cell of artery)
0002544 (aortic endothelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000947 (aorta)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0004573 (systemic artery)
0000487 (simple squamous epithelium)
0003509 (arterial blood vessel)
0004638 (blood vessel endothelium)
0003915 (endothelial tube)
0004700 (arterial system endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001917 (endothelium of artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000047 (human endothelial cell of the artery sample)
0000048 (human endothelial cell of the aorta sample)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)
