FFCP PHASE1:Hg19::chr7:1177874..1177936,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84310 | |EntrezGene=84310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22421 | |HGNC=22421 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRJ6,C9JQV0 | |UniProt=Q9BRJ6,C9JQV0 | ||
|association_with_transcript=0bp_to_ENST00000357429,ENST00000397098,ENST00000397100,ENST00000491163,NM_001134395,NM_001134396,NM_032350,uc003sju.2,uc011jvt.1,uc011jvu.1_5end | |association_with_transcript=0bp_to_ENST00000357429,ENST00000397098,ENST00000397100,ENST00000491163,NM_001134395,NM_001134396,NM_032350,uc003sju.2,uc011jvt.1,uc011jvu.1_5end | ||
|cluster_id=chr7:1177874..1177936,- | |||
|coexpression_cluster_id=C1171 | |coexpression_cluster_id=C1171 | ||
|description=CAGE_peak_2_at_C7orf50_5end | |description=CAGE_peak_2_at_C7orf50_5end | ||
|id=chr7:1177874..1177936,- | |id=chr7:1177874..1177936,- | ||
|ontology_enrichment_celltype=CL:0000066!1.52e-38!254;CL:0002321!4.91e-29!248;CL:0000220!2.53e-28!246;CL:0000222!9.84e-16!119;CL:0000548!2.18e-14!679;CL:0000004!2.18e-14!679;CL:0000255!2.18e-14!679;CL:0000012!5.71e-14!682;CL:0000076!1.71e-12!62;CL:0000213!5.32e-10!57;CL:0000215!5.32e-10!57;CL:0000055!5.32e-09!180;CL:1000449!6.38e-09!16;CL:0002078!7.55e-09!44;CL:1000497!1.21e-08!18;CL:0002518!1.21e-08!18;CL:0000183!5.61e-08!59;CL:0000115!6.16e-08!35;CL:0002681!7.53e-08!13;CL:0002584!7.53e-08!13;CL:0000393!9.45e-08!60;CL:0000211!9.45e-08!60;CL:0000071!1.41e-07!18;CL:0002546!1.41e-07!18;CL:0000221!4.97e-07!71 | |ontology_enrichment_celltype=CL:0000066!1.52e-38!254;CL:0002321!4.91e-29!248;CL:0000220!2.53e-28!246;CL:0000222!9.84e-16!119;CL:0000548!2.18e-14!679;CL:0000004!2.18e-14!679;CL:0000255!2.18e-14!679;CL:0000012!5.71e-14!682;CL:0000076!1.71e-12!62;CL:0000213!5.32e-10!57;CL:0000215!5.32e-10!57;CL:0000055!5.32e-09!180;CL:1000449!6.38e-09!16;CL:0002078!7.55e-09!44;CL:1000497!1.21e-08!18;CL:0002518!1.21e-08!18;CL:0000183!5.61e-08!59;CL:0000115!6.16e-08!35;CL:0002681!7.53e-08!13;CL:0002584!7.53e-08!13;CL:0000393!9.45e-08!60;CL:0000211!9.45e-08!60;CL:0000071!1.41e-07!18;CL:0002546!1.41e-07!18;CL:0000221!4.97e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.54e-09;15!CL:1000497;3.82e-09;17!CL:0002518;3.82e-09;17!CL:0002681;1.65e-08;12!CL:0002584;1.65e-08;12!CL:0000071;1.48e-07;18!CL:0000115;3.19e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.00e-38,253;CL:0002321,2.16e-29,250;CL:0000222,5.35e-16,121;CL:0000076,8.29e-12,63;CL:0000213,1.90e-10,58;CL:0000215,1.90e-10,58;CL:1000449,1.51e-09,15;CL:0002078,2.63e-09,45;CL:1000497,3.49e-09,17;CL:0002518,3.49e-09,17;CL:0002681,1.62e-08,12;CL:0002584,1.62e-08,12;CL:0000115,2.09e-08,36;CL:0000393,1.37e-07,61;CL:0000211,1.37e-07,61;CL:0000071,1.41e-07,18;CL:0002546,1.41e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.48e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!4.68e-13!239;DOID:162!5.28e-13!235;DOID:0050687!1.05e-12!143;DOID:305!8.03e-12!106 | |ontology_enrichment_disease=DOID:14566!4.68e-13!239;DOID:162!5.28e-13!235;DOID:0050687!1.05e-12!143;DOID:305!8.03e-12!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.67e-13,239;DOID:162,5.27e-13,235;DOID:0050687,1.05e-12,143;DOID:305,8.01e-12,106 | |||
|ontology_enrichment_uberon=UBERON:0003914!4.95e-16!118;UBERON:0003104!8.28e-16!238;UBERON:0009142!8.28e-16!238;UBERON:0000119!4.87e-14!312;UBERON:0000483!2.27e-13!309;UBERON:0002100!2.48e-13!216;UBERON:0000481!1.11e-11!347;UBERON:0000490!3.75e-11!138;UBERON:0005256!6.42e-11!143;UBERON:0001048!5.73e-10!168;UBERON:0009569!2.57e-09!113;UBERON:0005177!2.82e-09!107;UBERON:0002049!6.32e-09!79;UBERON:0007798!6.32e-09!79;UBERON:0004211!6.38e-09!16;UBERON:0001285!6.38e-09!16;UBERON:0007684!6.38e-09!16;UBERON:0003220!6.38e-09!16;UBERON:0004208!6.38e-09!16;UBERON:0001981!1.10e-08!60;UBERON:0007500!1.10e-08!60;UBERON:0004537!1.10e-08!60;UBERON:0006965!1.10e-08!60;UBERON:0004872!1.31e-08!84;UBERON:0000055!1.83e-08!69;UBERON:0006555!2.59e-08!17;UBERON:0005103!2.59e-08!17;UBERON:0000083!2.59e-08!17;UBERON:0009201!2.59e-08!17;UBERON:0004819!2.59e-08!17;UBERON:0006553!2.59e-08!17;UBERON:0003074!2.59e-08!17;UBERON:0003060!2.59e-08!17;UBERON:0000475!3.01e-08!365;UBERON:0002113!3.12e-08!27;UBERON:0003918!3.12e-08!27;UBERON:0005095!3.12e-08!27;UBERON:0007687!3.12e-08!27;UBERON:0000466!3.47e-08!126;UBERON:0000487!5.49e-08!22;UBERON:0006554!6.79e-08!44;UBERON:0001225!7.53e-08!13;UBERON:0008987!7.53e-08!13;UBERON:0003103!9.50e-08!69;UBERON:0000353!1.06e-07!17;UBERON:0001851!1.29e-07!16;UBERON:0001986!1.41e-07!18;UBERON:0004638!1.41e-07!18;UBERON:0004852!1.41e-07!18;UBERON:0000080!1.81e-07!18;UBERON:0002120!1.81e-07!18;UBERON:0004875!1.81e-07!18;UBERON:0005721!1.81e-07!18;UBERON:0005754!1.81e-07!18;UBERON:0007297!1.81e-07!18;UBERON:0001008!2.78e-07!45;UBERON:0005172!3.36e-07!55;UBERON:0005173!3.36e-07!55;UBERON:0000464!4.85e-07!104;UBERON:0000486!6.13e-07!82;UBERON:0006914!6.96e-07!25;UBERON:0000025!9.17e-07!194 | |ontology_enrichment_uberon=UBERON:0003914!4.95e-16!118;UBERON:0003104!8.28e-16!238;UBERON:0009142!8.28e-16!238;UBERON:0000119!4.87e-14!312;UBERON:0000483!2.27e-13!309;UBERON:0002100!2.48e-13!216;UBERON:0000481!1.11e-11!347;UBERON:0000490!3.75e-11!138;UBERON:0005256!6.42e-11!143;UBERON:0001048!5.73e-10!168;UBERON:0009569!2.57e-09!113;UBERON:0005177!2.82e-09!107;UBERON:0002049!6.32e-09!79;UBERON:0007798!6.32e-09!79;UBERON:0004211!6.38e-09!16;UBERON:0001285!6.38e-09!16;UBERON:0007684!6.38e-09!16;UBERON:0003220!6.38e-09!16;UBERON:0004208!6.38e-09!16;UBERON:0001981!1.10e-08!60;UBERON:0007500!1.10e-08!60;UBERON:0004537!1.10e-08!60;UBERON:0006965!1.10e-08!60;UBERON:0004872!1.31e-08!84;UBERON:0000055!1.83e-08!69;UBERON:0006555!2.59e-08!17;UBERON:0005103!2.59e-08!17;UBERON:0000083!2.59e-08!17;UBERON:0009201!2.59e-08!17;UBERON:0004819!2.59e-08!17;UBERON:0006553!2.59e-08!17;UBERON:0003074!2.59e-08!17;UBERON:0003060!2.59e-08!17;UBERON:0000475!3.01e-08!365;UBERON:0002113!3.12e-08!27;UBERON:0003918!3.12e-08!27;UBERON:0005095!3.12e-08!27;UBERON:0007687!3.12e-08!27;UBERON:0000466!3.47e-08!126;UBERON:0000487!5.49e-08!22;UBERON:0006554!6.79e-08!44;UBERON:0001225!7.53e-08!13;UBERON:0008987!7.53e-08!13;UBERON:0003103!9.50e-08!69;UBERON:0000353!1.06e-07!17;UBERON:0001851!1.29e-07!16;UBERON:0001986!1.41e-07!18;UBERON:0004638!1.41e-07!18;UBERON:0004852!1.41e-07!18;UBERON:0000080!1.81e-07!18;UBERON:0002120!1.81e-07!18;UBERON:0004875!1.81e-07!18;UBERON:0005721!1.81e-07!18;UBERON:0005754!1.81e-07!18;UBERON:0007297!1.81e-07!18;UBERON:0001008!2.78e-07!45;UBERON:0005172!3.36e-07!55;UBERON:0005173!3.36e-07!55;UBERON:0000464!4.85e-07!104;UBERON:0000486!6.13e-07!82;UBERON:0006914!6.96e-07!25;UBERON:0000025!9.17e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.92e-10;30!UBERON:0001008;1.92e-10;30!UBERON:0002113;9.32e-10;24!UBERON:0011143;9.32e-10;24!UBERON:0006555;1.54e-09;15!UBERON:0004819;1.54e-09;15!UBERON:0001285;1.54e-09;15!UBERON:0007684;1.54e-09;15!UBERON:0000353;9.43e-09;15!UBERON:0001225;1.65e-08;12!UBERON:0008987;1.65e-08;12!UBERON:0001851;4.16e-08;15!UBERON:0000487;5.70e-08;22!UBERON:0003914;9.02e-08;74!UBERON:0000489;1.38e-07;29!UBERON:0004638;1.48e-07;18!UBERON:0001986;1.48e-07;18!UBERON:0004852;1.48e-07;18!UBERON:0000490;1.95e-07;33!UBERON:0000025;4.09e-07;93!UBERON:0006914;6.49e-07;25 | |||
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| ||
|short_description=p2@C7orf50 | |short_description=p2@C7orf50 | ||
}} | }} |
Latest revision as of 20:18, 15 September 2015
Short description: | p2@C7orf50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C7orf50_5end |
Coexpression cluster: | C1171_Alveolar_Renal_Bronchial_Mesenchymal_Smooth_Keratinocyte_embryonic |
Association with transcript: | 0bp_to_ENST00000357429, ENST00000397098, ENST00000397100, ENST00000491163, NM_001134395, NM_001134396, NM_032350, uc003sju.2, uc011jvt.1, uc011jvu.1_5end |
EntrezGene: | C7orf50 |
HGNC: | 22421 |
UniProt: | Q9BRJ6C9JQV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.00e-38 | 253 |
embryonic cell | 2.16e-29 | 250 |
mesodermal cell | 5.35e-16 | 121 |
squamous epithelial cell | 8.29e-12 | 63 |
lining cell | 1.90e-10 | 58 |
barrier cell | 1.90e-10 | 58 |
epithelial cell of nephron | 1.51e-09 | 15 |
meso-epithelial cell | 2.63e-09 | 45 |
kidney cell | 3.49e-09 | 17 |
kidney epithelial cell | 3.49e-09 | 17 |
kidney cortical cell | 1.62e-08 | 12 |
renal cortical epithelial cell | 1.62e-08 | 12 |
endothelial cell | 2.09e-08 | 36 |
electrically responsive cell | 1.37e-07 | 61 |
electrically active cell | 1.37e-07 | 61 |
blood vessel endothelial cell | 1.41e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.41e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.67e-13 | 239 |
cancer | 5.27e-13 | 235 |
cell type cancer | 1.05e-12 | 143 |
carcinoma | 8.01e-12 | 106 |