FFCP PHASE1:Hg19::chr19:18492973..18492983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18492973..18492983,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_at_chr19:18492973..18492983,+ | |description=CAGE_peak_at_chr19:18492973..18492983,+ | ||
|id=chr19:18492973..18492983,+ | |id=chr19:18492973..18492983,+ | ||
|ontology_enrichment_celltype=CL:1000449!3.14e-12!16;CL:1000507!7.69e-11!12;CL:1000494!7.69e-11!12;CL:1000497!1.32e-10!18;CL:0002518!1.32e-10!18;CL:0002681!4.73e-10!13;CL:0002584!4.73e-10!13;CL:0000066!1.16e-08!254;CL:0002504!7.64e-08!3;CL:1000279!7.64e-08!3;CL:1000280!7.64e-08!3;CL:0002586!1.42e-07!3;CL:0000669!1.95e-07!5;CL:0000075!5.22e-07!27;CL:0000064!8.03e-07!3;CL:0005012!8.03e-07!3;CL:0000067!8.03e-07!3;CL:0002304!8.03e-07!3 | |ontology_enrichment_celltype=CL:1000449!3.14e-12!16;CL:1000507!7.69e-11!12;CL:1000494!7.69e-11!12;CL:1000497!1.32e-10!18;CL:0002518!1.32e-10!18;CL:0002681!4.73e-10!13;CL:0002584!4.73e-10!13;CL:0000066!1.16e-08!254;CL:0002504!7.64e-08!3;CL:1000279!7.64e-08!3;CL:1000280!7.64e-08!3;CL:0002586!1.42e-07!3;CL:0000669!1.95e-07!5;CL:0000075!5.22e-07!27;CL:0000064!8.03e-07!3;CL:0005012!8.03e-07!3;CL:0000067!8.03e-07!3;CL:0002304!8.03e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.66e-14;4!CL:0000669;5.65e-14;4!CL:0000650;7.04e-13;2!CL:1000500;7.04e-13;2!CL:1000618;7.04e-13;2!CL:1001318;7.04e-13;2!CL:0002173;7.04e-13;2!CL:0002681;1.83e-12;12!CL:0002584;1.83e-12;12!CL:1000449;6.25e-10;15!CL:1000507;1.04e-09;10!CL:1000494;1.04e-09;10!CL:0000322;2.14e-09;3!CL:0002504;2.23e-09;3!CL:1000279;2.23e-09;3!CL:1000280;2.23e-09;3!CL:0002586;2.64e-09;3!CL:1000497;9.79e-09;17!CL:0002518;9.79e-09;17!CL:0000182;1.18e-08;12!CL:1000746;1.92e-08;7!CL:1000612;1.92e-08;7!CL:0000149;3.51e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.74e-14,4;CL:0000669,8.12e-14,4;CL:0000650,7.96e-13,2;CL:1000500,7.96e-13,2;CL:1000618,7.96e-13,2;CL:1001318,7.96e-13,2;CL:0002173,7.96e-13,2;CL:0002681,1.88e-12,12;CL:0002584,1.88e-12,12;CL:1000449,6.39e-10,15;CL:1000507,1.06e-09,10;CL:1000494,1.06e-09,10;CL:0002504,2.06e-09,3;CL:1000279,2.06e-09,3;CL:1000280,2.06e-09,3;CL:0000322,2.15e-09,3;CL:0002586,2.64e-09,3;CL:0000182,9.89e-09,12;CL:1000497,9.98e-09,17;CL:0002518,9.98e-09,17;CL:1000746,2.02e-08,7;CL:1000612,2.02e-08,7;CL:0000223,2.60e-07,58;CL:0000149,3.52e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0001041;8.34e-19;30!UBERON:0004161;4.14e-14;11!UBERON:0009497;6.63e-12;13!UBERON:0003104;2.20e-11;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;9.09e-08;1!DOID:1357;9.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.10e-08,1;DOID:1357,9.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002113!9.12e-15!27;UBERON:0003918!9.12e-15!27;UBERON:0005095!9.12e-15!27;UBERON:0007687!9.12e-15!27;UBERON:0007625!3.61e-14!11;UBERON:0005172!8.37e-14!55;UBERON:0005173!8.37e-14!55;UBERON:0000489!1.75e-13!32;UBERON:0005177!2.99e-13!107;UBERON:0002417!5.00e-13!61;UBERON:0000916!5.00e-13!61;UBERON:0006554!1.21e-12!44;UBERON:0001008!3.01e-12!45;UBERON:0004211!3.14e-12!16;UBERON:0001285!3.14e-12!16;UBERON:0007684!3.14e-12!16;UBERON:0003220!3.14e-12!16;UBERON:0004208!3.14e-12!16;UBERON:0009569!4.72e-12!113;UBERON:0000466!1.51e-11!126;UBERON:0006555!2.28e-11!17;UBERON:0005103!2.28e-11!17;UBERON:0000083!2.28e-11!17;UBERON:0009201!2.28e-11!17;UBERON:0004819!2.28e-11!17;UBERON:0006553!2.28e-11!17;UBERON:0003074!2.28e-11!17;UBERON:0003060!2.28e-11!17;UBERON:0009773!7.69e-11!12;UBERON:0001231!7.69e-11!12;UBERON:0004810!7.69e-11!12;UBERON:0000080!1.32e-10!18;UBERON:0002120!1.32e-10!18;UBERON:0004875!1.32e-10!18;UBERON:0005721!1.32e-10!18;UBERON:0005754!1.32e-10!18;UBERON:0007297!1.32e-10!18;UBERON:0001225!4.73e-10!13;UBERON:0008987!4.73e-10!13;UBERON:0004876!2.60e-09!20;UBERON:0000019!4.51e-09!19;UBERON:0000047!4.51e-09!19;UBERON:0004088!4.51e-09!19;UBERON:0003072!4.51e-09!19;UBERON:0003071!4.51e-09!19;UBERON:0004128!4.51e-09!19;UBERON:0003887!9.30e-09!21;UBERON:0000481!1.20e-08!347;UBERON:0000464!1.39e-08!104;UBERON:0000970!1.64e-08!20;UBERON:0000058!3.35e-08!26;UBERON:0003064!4.09e-08!37;UBERON:0005911!4.57e-08!82;UBERON:0002104!5.27e-08!21;UBERON:0001456!5.27e-08!21;UBERON:0000119!6.63e-08!312;UBERON:0001851!7.37e-08!16;UBERON:0001781!1.42e-07!3;UBERON:0001782!1.42e-07!3;UBERON:0005424!1.42e-07!3;UBERON:0002100!1.51e-07!216;UBERON:0003350!1.57e-07!5;UBERON:0000353!2.65e-07!17;UBERON:0000966!3.01e-07!5;UBERON:0005388!3.01e-07!5;UBERON:0001802!3.01e-07!5;UBERON:0000020!3.97e-07!23;UBERON:0003104!5.59e-07!238;UBERON:0009142!5.59e-07!238;UBERON:0001778!8.03e-07!3;UBERON:0001775!8.03e-07!3;UBERON:0001032!9.58e-07!24;UBERON:0004456!9.58e-07!24 | |ontology_enrichment_uberon=UBERON:0002113!9.12e-15!27;UBERON:0003918!9.12e-15!27;UBERON:0005095!9.12e-15!27;UBERON:0007687!9.12e-15!27;UBERON:0007625!3.61e-14!11;UBERON:0005172!8.37e-14!55;UBERON:0005173!8.37e-14!55;UBERON:0000489!1.75e-13!32;UBERON:0005177!2.99e-13!107;UBERON:0002417!5.00e-13!61;UBERON:0000916!5.00e-13!61;UBERON:0006554!1.21e-12!44;UBERON:0001008!3.01e-12!45;UBERON:0004211!3.14e-12!16;UBERON:0001285!3.14e-12!16;UBERON:0007684!3.14e-12!16;UBERON:0003220!3.14e-12!16;UBERON:0004208!3.14e-12!16;UBERON:0009569!4.72e-12!113;UBERON:0000466!1.51e-11!126;UBERON:0006555!2.28e-11!17;UBERON:0005103!2.28e-11!17;UBERON:0000083!2.28e-11!17;UBERON:0009201!2.28e-11!17;UBERON:0004819!2.28e-11!17;UBERON:0006553!2.28e-11!17;UBERON:0003074!2.28e-11!17;UBERON:0003060!2.28e-11!17;UBERON:0009773!7.69e-11!12;UBERON:0001231!7.69e-11!12;UBERON:0004810!7.69e-11!12;UBERON:0000080!1.32e-10!18;UBERON:0002120!1.32e-10!18;UBERON:0004875!1.32e-10!18;UBERON:0005721!1.32e-10!18;UBERON:0005754!1.32e-10!18;UBERON:0007297!1.32e-10!18;UBERON:0001225!4.73e-10!13;UBERON:0008987!4.73e-10!13;UBERON:0004876!2.60e-09!20;UBERON:0000019!4.51e-09!19;UBERON:0000047!4.51e-09!19;UBERON:0004088!4.51e-09!19;UBERON:0003072!4.51e-09!19;UBERON:0003071!4.51e-09!19;UBERON:0004128!4.51e-09!19;UBERON:0003887!9.30e-09!21;UBERON:0000481!1.20e-08!347;UBERON:0000464!1.39e-08!104;UBERON:0000970!1.64e-08!20;UBERON:0000058!3.35e-08!26;UBERON:0003064!4.09e-08!37;UBERON:0005911!4.57e-08!82;UBERON:0002104!5.27e-08!21;UBERON:0001456!5.27e-08!21;UBERON:0000119!6.63e-08!312;UBERON:0001851!7.37e-08!16;UBERON:0001781!1.42e-07!3;UBERON:0001782!1.42e-07!3;UBERON:0005424!1.42e-07!3;UBERON:0002100!1.51e-07!216;UBERON:0003350!1.57e-07!5;UBERON:0000353!2.65e-07!17;UBERON:0000966!3.01e-07!5;UBERON:0005388!3.01e-07!5;UBERON:0001802!3.01e-07!5;UBERON:0000020!3.97e-07!23;UBERON:0003104!5.59e-07!238;UBERON:0009142!5.59e-07!238;UBERON:0001778!8.03e-07!3;UBERON:0001775!8.03e-07!3;UBERON:0001032!9.58e-07!24;UBERON:0004456!9.58e-07!24 | ||
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|short_description=p@chr19:18492973..18492983,+ | |short_description=p@chr19:18492973..18492983,+ | ||
}} | }} |
Latest revision as of 05:10, 26 July 2015
Short description: | p@chr19:18492973..18492983, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18492973..18492983, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.74e-14 | 4 |
pericyte cell | 8.12e-14 | 4 |
mesangial cell | 7.96e-13 | 2 |
kidney interstitial cell | 7.96e-13 | 2 |
juxtaglomerular complex cell | 7.96e-13 | 2 |
renal interstitial pericyte | 7.96e-13 | 2 |
extraglomerular mesangial cell | 7.96e-13 | 2 |
kidney cortical cell | 1.88e-12 | 12 |
renal cortical epithelial cell | 1.88e-12 | 12 |
epithelial cell of nephron | 6.39e-10 | 15 |
kidney tubule cell | 1.06e-09 | 10 |
nephron tubule epithelial cell | 1.06e-09 | 10 |
enteric smooth muscle cell | 2.06e-09 | 3 |
smooth muscle cell of large intestine | 2.06e-09 | 3 |
smooth muscle cell of colon | 2.06e-09 | 3 |
pneumocyte | 2.15e-09 | 3 |
retinal pigment epithelial cell | 2.64e-09 | 3 |
hepatocyte | 9.89e-09 | 12 |
kidney cell | 9.98e-09 | 17 |
kidney epithelial cell | 9.98e-09 | 17 |
glomerular cell | 2.02e-08 | 7 |
kidney corpuscule cell | 2.02e-08 | 7 |
endodermal cell | 2.60e-07 | 58 |
visual pigment cell | 3.52e-07 | 4 |
Ontology term | p-value | n |
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