FFCP PHASE1:Hg19::chr3:149260318..149260331,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-92bp_to_ENST00000485244_5end | |association_with_transcript=-92bp_to_ENST00000485244_5end | ||
|cluster_id=chr3:149260318..149260331,- | |||
|coexpression_cluster_id=C1922 | |||
|description=CAGE_peak_14_at_WWTR1_5end | |description=CAGE_peak_14_at_WWTR1_5end | ||
|id=chr3:149260318..149260331,- | |id=chr3:149260318..149260331,- | ||
|ontology_enrichment_celltype=CL:0000071!1.32e-16!18;CL:0002546!1.32e-16!18;CL:0002139!4.96e-16!24;CL:0002078!2.12e-14!44;CL:0000115!5.89e-14!35;CL:0000222!2.22e-11!119;CL:0000213!1.89e-10!57;CL:0000215!1.89e-10!57;CL:1000497!1.15e-09!18;CL:0002518!1.15e-09!18;CL:1000449!6.75e-08!16;CL:0002543!8.21e-08!6;CL:0000066!8.23e-08!254;CL:0000220!9.47e-08!246;CL:1000507!1.31e-07!12;CL:1000494!1.31e-07!12;CL:0002321!1.57e-07!248;CL:1000413!2.05e-07!9 | |ontology_enrichment_celltype=CL:0000071!1.32e-16!18;CL:0002546!1.32e-16!18;CL:0002139!4.96e-16!24;CL:0002078!2.12e-14!44;CL:0000115!5.89e-14!35;CL:0000222!2.22e-11!119;CL:0000213!1.89e-10!57;CL:0000215!1.89e-10!57;CL:1000497!1.15e-09!18;CL:0002518!1.15e-09!18;CL:1000449!6.75e-08!16;CL:0002543!8.21e-08!6;CL:0000066!8.23e-08!254;CL:0000220!9.47e-08!246;CL:1000507!1.31e-07!12;CL:1000494!1.31e-07!12;CL:0002321!1.57e-07!248;CL:1000413!2.05e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.11e-21;17!CL:0002518;3.11e-21;17!CL:1000507;1.18e-20;10!CL:1000494;1.18e-20;10!CL:1000449;2.02e-18;15!CL:0000071;4.61e-15;18!CL:0002139;2.25e-14;24!CL:0002545;1.73e-12;2!CL:0002681;3.80e-12;12!CL:0002584;3.80e-12;12!CL:0000115;4.32e-10;36!CL:0002543;1.54e-09;6!CL:0000239;5.84e-09;3!CL:1000615;5.84e-09;3!CL:0002306;5.84e-09;3!CL:0002618;8.18e-09;3!CL:0002144;1.28e-08;3!CL:0002078;8.24e-08;45!CL:0000313;1.16e-07;1!CL:0000213;7.49e-07;58!CL:0000215;7.49e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.83e-21,17;CL:0002518,3.83e-21,17;CL:1000507,1.44e-20,10;CL:1000494,1.44e-20,10;CL:1000449,2.48e-18,15;CL:0000071,3.40e-15,18;CL:0002546,3.40e-15,18;CL:0002139,2.00e-14,24;CL:0002078,9.96e-14,45;CL:0002545,1.22e-12,2;CL:0002681,5.31e-12,12;CL:0002584,5.31e-12,12;CL:0000115,1.04e-11,36;CL:0002543,1.54e-09,6;CL:0000239,6.09e-09,3;CL:1000615,6.09e-09,3;CL:0002306,6.09e-09,3;CL:0002618,7.72e-09,3;CL:0002144,9.40e-09,3;CL:0000213,2.07e-08,58;CL:0000215,2.07e-08,58;CL:0000222,6.72e-08,121;CL:0000066,1.19e-07,253;CL:0000313,1.20e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002546;4.61e-15;18!UBERON:0000358;2.22e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;8.77e-13;2!DOID:2152;1.16e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.60e-13,2;DOID:2152,1.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003914!2.09e-18!118;UBERON:0001986!1.32e-16!18;UBERON:0004638!1.32e-16!18;UBERON:0004852!1.32e-16!18;UBERON:0000487!8.92e-16!22;UBERON:0000483!9.24e-14!309;UBERON:0000119!9.72e-14!312;UBERON:0006914!4.68e-13!25;UBERON:0002049!6.45e-13!79;UBERON:0007798!6.45e-13!79;UBERON:0000025!1.30e-12!194;UBERON:0000490!1.01e-11!138;UBERON:0001981!1.38e-11!60;UBERON:0007500!1.38e-11!60;UBERON:0004537!1.38e-11!60;UBERON:0006965!1.38e-11!60;UBERON:0000055!2.24e-11!69;UBERON:0000477!2.76e-11!286;UBERON:0004111!2.93e-11!241;UBERON:0002100!6.33e-11!216;UBERON:0004872!6.83e-11!84;UBERON:0001009!1.03e-09!113;UBERON:0002113!3.17e-09!27;UBERON:0003918!3.17e-09!27;UBERON:0005095!3.17e-09!27;UBERON:0007687!3.17e-09!27;UBERON:0004535!3.96e-09!110;UBERON:0000481!1.65e-08!347;UBERON:0006555!2.05e-08!17;UBERON:0005103!2.05e-08!17;UBERON:0000083!2.05e-08!17;UBERON:0009201!2.05e-08!17;UBERON:0004819!2.05e-08!17;UBERON:0006553!2.05e-08!17;UBERON:0003074!2.05e-08!17;UBERON:0003060!2.05e-08!17;UBERON:0000058!2.64e-08!26;UBERON:0005256!4.83e-08!143;UBERON:0004211!6.75e-08!16;UBERON:0001285!6.75e-08!16;UBERON:0007684!6.75e-08!16;UBERON:0003220!6.75e-08!16;UBERON:0004208!6.75e-08!16;UBERON:0003104!7.16e-08!238;UBERON:0009142!7.16e-08!238;UBERON:0003887!7.32e-08!21;UBERON:0000080!9.80e-08!18;UBERON:0002120!9.80e-08!18;UBERON:0004875!9.80e-08!18;UBERON:0005721!9.80e-08!18;UBERON:0005754!9.80e-08!18;UBERON:0007297!9.80e-08!18;UBERON:0001637!9.97e-08!42;UBERON:0003509!9.97e-08!42;UBERON:0004572!9.97e-08!42;UBERON:0009773!1.31e-07!12;UBERON:0001231!1.31e-07!12;UBERON:0004810!1.31e-07!12;UBERON:0003915!2.05e-07!9;UBERON:0004700!2.05e-07!9;UBERON:0001917!2.05e-07!9;UBERON:0000475!2.21e-07!365;UBERON:0005172!3.68e-07!55;UBERON:0005173!3.68e-07!55;UBERON:0000489!6.09e-07!32 | |ontology_enrichment_uberon=UBERON:0003914!2.09e-18!118;UBERON:0001986!1.32e-16!18;UBERON:0004638!1.32e-16!18;UBERON:0004852!1.32e-16!18;UBERON:0000487!8.92e-16!22;UBERON:0000483!9.24e-14!309;UBERON:0000119!9.72e-14!312;UBERON:0006914!4.68e-13!25;UBERON:0002049!6.45e-13!79;UBERON:0007798!6.45e-13!79;UBERON:0000025!1.30e-12!194;UBERON:0000490!1.01e-11!138;UBERON:0001981!1.38e-11!60;UBERON:0007500!1.38e-11!60;UBERON:0004537!1.38e-11!60;UBERON:0006965!1.38e-11!60;UBERON:0000055!2.24e-11!69;UBERON:0000477!2.76e-11!286;UBERON:0004111!2.93e-11!241;UBERON:0002100!6.33e-11!216;UBERON:0004872!6.83e-11!84;UBERON:0001009!1.03e-09!113;UBERON:0002113!3.17e-09!27;UBERON:0003918!3.17e-09!27;UBERON:0005095!3.17e-09!27;UBERON:0007687!3.17e-09!27;UBERON:0004535!3.96e-09!110;UBERON:0000481!1.65e-08!347;UBERON:0006555!2.05e-08!17;UBERON:0005103!2.05e-08!17;UBERON:0000083!2.05e-08!17;UBERON:0009201!2.05e-08!17;UBERON:0004819!2.05e-08!17;UBERON:0006553!2.05e-08!17;UBERON:0003074!2.05e-08!17;UBERON:0003060!2.05e-08!17;UBERON:0000058!2.64e-08!26;UBERON:0005256!4.83e-08!143;UBERON:0004211!6.75e-08!16;UBERON:0001285!6.75e-08!16;UBERON:0007684!6.75e-08!16;UBERON:0003220!6.75e-08!16;UBERON:0004208!6.75e-08!16;UBERON:0003104!7.16e-08!238;UBERON:0009142!7.16e-08!238;UBERON:0003887!7.32e-08!21;UBERON:0000080!9.80e-08!18;UBERON:0002120!9.80e-08!18;UBERON:0004875!9.80e-08!18;UBERON:0005721!9.80e-08!18;UBERON:0005754!9.80e-08!18;UBERON:0007297!9.80e-08!18;UBERON:0001637!9.97e-08!42;UBERON:0003509!9.97e-08!42;UBERON:0004572!9.97e-08!42;UBERON:0009773!1.31e-07!12;UBERON:0001231!1.31e-07!12;UBERON:0004810!1.31e-07!12;UBERON:0003915!2.05e-07!9;UBERON:0004700!2.05e-07!9;UBERON:0001917!2.05e-07!9;UBERON:0000475!2.21e-07!365;UBERON:0005172!3.68e-07!55;UBERON:0005173!3.68e-07!55;UBERON:0000489!6.09e-07!32 | ||
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|short_description=p14@WWTR1 | |short_description=p14@WWTR1 | ||
}} | }} |
Latest revision as of 21:53, 15 September 2015
Short description: | p14@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_WWTR1_5end |
Coexpression cluster: | C1922_renal_mesothelioma_serous_Renal_glioblastoma_Skeletal_lung |
Association with transcript: | -92bp_to_ENST00000485244_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.83e-21 | 17 |
kidney epithelial cell | 3.83e-21 | 17 |
kidney tubule cell | 1.44e-20 | 10 |
nephron tubule epithelial cell | 1.44e-20 | 10 |
epithelial cell of nephron | 2.48e-18 | 15 |
blood vessel endothelial cell | 3.40e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.40e-15 | 18 |
endothelial cell of vascular tree | 2.00e-14 | 24 |
meso-epithelial cell | 9.96e-14 | 45 |
thoracic aorta endothelial cell | 1.22e-12 | 2 |
kidney cortical cell | 5.31e-12 | 12 |
renal cortical epithelial cell | 5.31e-12 | 12 |
endothelial cell | 1.04e-11 | 36 |
vein endothelial cell | 1.54e-09 | 6 |
brush border epithelial cell | 6.09e-09 | 3 |
kidney cortex tubule cell | 6.09e-09 | 3 |
epithelial cell of proximal tubule | 6.09e-09 | 3 |
endothelial cell of umbilical vein | 7.72e-09 | 3 |
capillary endothelial cell | 9.40e-09 | 3 |
lining cell | 2.07e-08 | 58 |
barrier cell | 2.07e-08 | 58 |
mesodermal cell | 6.72e-08 | 121 |
epithelial cell | 1.19e-07 | 253 |
serous secreting cell | 1.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.60e-13 | 2 |
ovary epithelial cancer | 1.20e-07 | 1 |