FFCP PHASE1:Hg19::chr20:6033120..6033128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=320bp_to_AB527789_5end | |association_with_transcript=320bp_to_AB527789_5end | ||
|cluster_id=chr20:6033120..6033128,- | |||
|description=CAGE_peak_4_at_AB527789_5end | |description=CAGE_peak_4_at_AB527789_5end | ||
|id=chr20:6033120..6033128,- | |id=chr20:6033120..6033128,- | ||
|ontology_enrichment_celltype=CL:1000507!1.45e-18!12;CL:1000494!1.45e-18!12;CL:1000497!2.69e-14!18;CL:0002518!2.69e-14!18;CL:1000449!2.04e-13!16;CL:0000066!1.73e-11!254;CL:0000239!9.80e-10!3;CL:1000615!9.80e-10!3;CL:0002306!9.80e-10!3;CL:0002681!1.29e-07!13;CL:0002584!1.29e-07!13 | |ontology_enrichment_celltype=CL:1000507!1.45e-18!12;CL:1000494!1.45e-18!12;CL:1000497!2.69e-14!18;CL:0002518!2.69e-14!18;CL:1000449!2.04e-13!16;CL:0000066!1.73e-11!254;CL:0000239!9.80e-10!3;CL:1000615!9.80e-10!3;CL:0002306!9.80e-10!3;CL:0002681!1.29e-07!13;CL:0002584!1.29e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;5.87e-59;10!CL:1000494;5.87e-59;10!CL:1000449;2.44e-39;15!CL:1000497;1.02e-34;17!CL:0002518;1.02e-34;17!CL:0000239;3.89e-23;3!CL:1000615;3.89e-23;3!CL:0002306;3.89e-23;3!CL:0002681;2.46e-22;12!CL:0002584;2.46e-22;12!CL:0002253;9.87e-10;2!CL:0000650;1.51e-09;2!CL:1000500;1.51e-09;2!CL:1000618;1.51e-09;2!CL:1001318;1.51e-09;2!CL:0002173;1.51e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.36e-59,10;CL:1000494,8.36e-59,10;CL:1000449,3.08e-39,15;CL:1000497,1.26e-34,17;CL:0002518,1.26e-34,17;CL:0000239,4.61e-23,3;CL:1000615,4.61e-23,3;CL:0002306,4.61e-23,3;CL:0002681,3.34e-22,12;CL:0002584,3.34e-22,12;CL:0002253,1.03e-09,2;CL:0000650,2.02e-09,2;CL:1000500,2.02e-09,2;CL:1000618,2.02e-09,2;CL:1001318,2.02e-09,2;CL:0002173,2.02e-09,2;CL:0000066,5.47e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!3.09e-07!25 | |ontology_enrichment_disease=DOID:299!3.09e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:4929;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.22e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;5.87e-59;10!UBERON:0009773;5.87e-59;10!UBERON:0001231;5.87e-59;10!UBERON:0004810;5.87e-59;10!UBERON:0006555;2.44e-39;15!UBERON:0004819;2.44e-39;15!UBERON:0001285;2.44e-39;15!UBERON:0007684;2.44e-39;15!UBERON:0002113;1.37e-24;24!UBERON:0011143;1.37e-24;24!UBERON:0006853;3.89e-23;3!UBERON:0007685;3.89e-23;3!UBERON:0004134;3.89e-23;3!UBERON:0001225;2.46e-22;12!UBERON:0008987;2.46e-22;12!UBERON:0000489;2.43e-20;29!UBERON:0006554;1.16e-19;30!UBERON:0001008;1.16e-19;30!UBERON:0001851;5.92e-18;15!UBERON:0000353;5.92e-18;15!UBERON:0004913;9.48e-18;1!UBERON:0003703;9.48e-18;1!UBERON:0001174;9.48e-18;1!UBERON:0004914;9.48e-18;1!UBERON:0002394;2.19e-17;4!UBERON:0003928;2.19e-17;4!UBERON:0002294;2.35e-10;7!UBERON:0001173;2.35e-10;7!UBERON:0005172;1.39e-09;52!UBERON:0005173;1.39e-09;52!UBERON:0003567;1.51e-09;2!UBERON:0003838;1.51e-09;2!UBERON:0003586;1.51e-09;2!UBERON:0005169;1.51e-09;2!UBERON:0002321;1.51e-09;2!UBERON:0005215;1.51e-09;2!UBERON:0002303;1.51e-09;2!UBERON:0002319;1.51e-09;2!UBERON:0000058;1.62e-07;10!UBERON:0002114;8.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.36e-59,10;UBERON:0004211,3.08e-39,15;UBERON:0009773,3.08e-39,15;UBERON:0001231,3.08e-39,15;UBERON:0001285,3.08e-39,15;UBERON:0007684,3.08e-39,15;UBERON:0004208,3.08e-39,15;UBERON:0006555,8.66e-37,16;UBERON:0004819,8.66e-37,16;UBERON:0006853,4.61e-23,3;UBERON:0007685,4.61e-23,3;UBERON:0004134,4.61e-23,3;UBERON:0002113,1.23e-22,26;UBERON:0003918,1.23e-22,26;UBERON:0011143,1.23e-22,26;UBERON:0005095,1.23e-22,26;UBERON:0007687,1.23e-22,26;UBERON:0001225,3.34e-22,12;UBERON:0008987,3.34e-22,12;UBERON:0000489,5.64e-19,31;UBERON:0004913,6.23e-18,1;UBERON:0003703,6.23e-18,1;UBERON:0001174,6.23e-18,1;UBERON:0004914,6.23e-18,1;UBERON:0001851,7.54e-18,15;UBERON:0000353,7.54e-18,15;UBERON:0006554,1.80e-12,47;UBERON:0001008,3.31e-12,48;UBERON:0002394,6.34e-12,6;UBERON:0003928,6.34e-12,6;UBERON:0005172,7.88e-11,54;UBERON:0005173,7.88e-11,54;UBERON:0002417,1.00e-09,60;UBERON:0000916,1.00e-09,60;UBERON:0003567,2.02e-09,2;UBERON:0003838,2.02e-09,2;UBERON:0003586,2.02e-09,2;UBERON:0005169,2.02e-09,2;UBERON:0002321,2.02e-09,2;UBERON:0005215,2.02e-09,2;UBERON:0002303,2.02e-09,2;UBERON:0002319,2.02e-09,2;UBERON:0003103,1.49e-08,68;UBERON:0003914,1.90e-08,117;UBERON:0000058,2.31e-08,19;UBERON:0002294,2.96e-08,9;UBERON:0001173,2.96e-08,9;UBERON:0004912,2.96e-08,9;UBERON:0003104,1.22e-07,160;UBERON:0009142,1.22e-07,160;UBERON:0005177,1.32e-07,101;UBERON:0002114,7.70e-07,2;UBERON:0009569,8.24e-07,112 | |||
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| ||
|short_description=p4@AB527789 | |short_description=p4@AB527789 | ||
}} | }} |
Latest revision as of 16:03, 28 July 2015
Short description: | p4@AB527789 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AB527789_5end |
Coexpression cluster: | NA |
Association with transcript: | 320bp_to_AB527789_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.36e-59 | 10 |
nephron tubule epithelial cell | 8.36e-59 | 10 |
epithelial cell of nephron | 3.08e-39 | 15 |
kidney cell | 1.26e-34 | 17 |
kidney epithelial cell | 1.26e-34 | 17 |
brush border epithelial cell | 4.61e-23 | 3 |
kidney cortex tubule cell | 4.61e-23 | 3 |
epithelial cell of proximal tubule | 4.61e-23 | 3 |
kidney cortical cell | 3.34e-22 | 12 |
renal cortical epithelial cell | 3.34e-22 | 12 |
epithelial cell of large intestine | 1.03e-09 | 2 |
mesangial cell | 2.02e-09 | 2 |
kidney interstitial cell | 2.02e-09 | 2 |
juxtaglomerular complex cell | 2.02e-09 | 2 |
renal interstitial pericyte | 2.02e-09 | 2 |
extraglomerular mesangial cell | 2.02e-09 | 2 |
epithelial cell | 5.47e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.22e-09 | 2 |