FFCP PHASE1:Hg19::chr17:39919430..39919468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39919430..39919468,+ | |||
|coexpression_cluster_id=C1433 | |||
|description=CAGE_peak_at_chr17:39919430..39919468,+ | |description=CAGE_peak_at_chr17:39919430..39919468,+ | ||
|id=chr17:39919430..39919468,+ | |id=chr17:39919430..39919468,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.84e-40!254;CL:0002076!9.55e-13!43;CL:0000223!4.03e-12!59;CL:0002321!9.74e-09!248;CL:0000220!1.03e-08!246;CL:0002251!5.48e-08!21;CL:0002078!8.93e-08!44;CL:1000449!2.11e-07!16;CL:1000497!2.97e-07!18;CL:0002518!2.97e-07!18;CL:0000115!3.27e-07!35 | |ontology_enrichment_celltype=CL:0000066!5.84e-40!254;CL:0002076!9.55e-13!43;CL:0000223!4.03e-12!59;CL:0002321!9.74e-09!248;CL:0000220!1.03e-08!246;CL:0002251!5.48e-08!21;CL:0002078!8.93e-08!44;CL:1000449!2.11e-07!16;CL:1000497!2.97e-07!18;CL:0002518!2.97e-07!18;CL:0000115!3.27e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.37e-13;42!CL:1000449;8.60e-12;15!CL:0002251;1.46e-11;20!CL:0002681;6.77e-10;12!CL:0002584;6.77e-10;12!CL:1000497;8.04e-10;17!CL:0002518;8.04e-10;17!CL:1000507;6.22e-08;10!CL:1000494;6.22e-08;10!CL:0000115;2.52e-07;36!CL:1000746;8.56e-07;7!CL:1000612;8.56e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-44,253;CL:0002076,1.27e-16,42;CL:0000223,6.16e-15,58;CL:1000449,3.72e-12,15;CL:0002251,1.46e-11,20;CL:1000497,3.94e-10,17;CL:0002518,3.94e-10,17;CL:0002681,4.93e-10,12;CL:0002584,4.93e-10,12;CL:0002078,4.58e-09,45;CL:0000115,1.44e-08,36;CL:1000507,3.29e-08,10;CL:1000494,3.29e-08,10;CL:1000746,7.64e-07,7;CL:1000612,7.64e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;3.49e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.02e-12!106;DOID:0050687!1.10e-07!143 | |ontology_enrichment_disease=DOID:305!1.02e-12!106;DOID:0050687!1.10e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.67e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.48e-18!169;UBERON:0000925!9.48e-18!169;UBERON:0006595!9.48e-18!169;UBERON:0001007!2.63e-13!155;UBERON:0001555!2.63e-13!155;UBERON:0007026!2.63e-13!155;UBERON:0000477!3.87e-13!286;UBERON:0004921!5.15e-12!129;UBERON:0004185!5.15e-12!129;UBERON:0000481!5.54e-12!347;UBERON:0000064!1.62e-11!219;UBERON:0001004!1.72e-11!72;UBERON:0006554!5.54e-11!44;UBERON:0000468!5.83e-11!659;UBERON:0000077!1.20e-10!130;UBERON:0000922!1.48e-10!612;UBERON:0001008!2.59e-10!45;UBERON:0000467!6.46e-10!625;UBERON:0002050!7.96e-10!605;UBERON:0005423!7.96e-10!605;UBERON:0004111!8.06e-10!241;UBERON:0000480!1.03e-09!626;UBERON:0000923!1.55e-09!604;UBERON:0005291!1.55e-09!604;UBERON:0006598!1.55e-09!604;UBERON:0002532!1.55e-09!604;UBERON:0000065!9.64e-09!53;UBERON:0000119!1.00e-08!312;UBERON:0000483!1.31e-08!309;UBERON:0003064!1.75e-08!37;UBERON:0001041!5.41e-08!98;UBERON:0000161!5.67e-08!35;UBERON:0000062!7.95e-08!511;UBERON:0000072!1.20e-07!46;UBERON:0005911!1.35e-07!82;UBERON:0003104!1.43e-07!238;UBERON:0009142!1.43e-07!238;UBERON:0006555!1.85e-07!17;UBERON:0005103!1.85e-07!17;UBERON:0000083!1.85e-07!17;UBERON:0009201!1.85e-07!17;UBERON:0004819!1.85e-07!17;UBERON:0006553!1.85e-07!17;UBERON:0003074!1.85e-07!17;UBERON:0003060!1.85e-07!17;UBERON:0004211!2.11e-07!16;UBERON:0001285!2.11e-07!16;UBERON:0007684!2.11e-07!16;UBERON:0003220!2.11e-07!16;UBERON:0004208!2.11e-07!16;UBERON:0005177!4.38e-07!107;UBERON:0001737!4.39e-07!9;UBERON:0008947!5.41e-07!38;UBERON:0003258!5.41e-07!38;UBERON:0003103!8.17e-07!69 | |ontology_enrichment_uberon=UBERON:0004119!9.48e-18!169;UBERON:0000925!9.48e-18!169;UBERON:0006595!9.48e-18!169;UBERON:0001007!2.63e-13!155;UBERON:0001555!2.63e-13!155;UBERON:0007026!2.63e-13!155;UBERON:0000477!3.87e-13!286;UBERON:0004921!5.15e-12!129;UBERON:0004185!5.15e-12!129;UBERON:0000481!5.54e-12!347;UBERON:0000064!1.62e-11!219;UBERON:0001004!1.72e-11!72;UBERON:0006554!5.54e-11!44;UBERON:0000468!5.83e-11!659;UBERON:0000077!1.20e-10!130;UBERON:0000922!1.48e-10!612;UBERON:0001008!2.59e-10!45;UBERON:0000467!6.46e-10!625;UBERON:0002050!7.96e-10!605;UBERON:0005423!7.96e-10!605;UBERON:0004111!8.06e-10!241;UBERON:0000480!1.03e-09!626;UBERON:0000923!1.55e-09!604;UBERON:0005291!1.55e-09!604;UBERON:0006598!1.55e-09!604;UBERON:0002532!1.55e-09!604;UBERON:0000065!9.64e-09!53;UBERON:0000119!1.00e-08!312;UBERON:0000483!1.31e-08!309;UBERON:0003064!1.75e-08!37;UBERON:0001041!5.41e-08!98;UBERON:0000161!5.67e-08!35;UBERON:0000062!7.95e-08!511;UBERON:0000072!1.20e-07!46;UBERON:0005911!1.35e-07!82;UBERON:0003104!1.43e-07!238;UBERON:0009142!1.43e-07!238;UBERON:0006555!1.85e-07!17;UBERON:0005103!1.85e-07!17;UBERON:0000083!1.85e-07!17;UBERON:0009201!1.85e-07!17;UBERON:0004819!1.85e-07!17;UBERON:0006553!1.85e-07!17;UBERON:0003074!1.85e-07!17;UBERON:0003060!1.85e-07!17;UBERON:0004211!2.11e-07!16;UBERON:0001285!2.11e-07!16;UBERON:0007684!2.11e-07!16;UBERON:0003220!2.11e-07!16;UBERON:0004208!2.11e-07!16;UBERON:0005177!4.38e-07!107;UBERON:0001737!4.39e-07!9;UBERON:0008947!5.41e-07!38;UBERON:0003258!5.41e-07!38;UBERON:0003103!8.17e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.60e-12;15!UBERON:0004819;8.60e-12;15!UBERON:0001285;8.60e-12;15!UBERON:0007684;8.60e-12;15!UBERON:0006554;1.86e-10;30!UBERON:0001008;1.86e-10;30!UBERON:0000353;3.04e-10;15!UBERON:0001737;4.64e-10;9!UBERON:0001557;4.64e-10;9!UBERON:0001225;6.77e-10;12!UBERON:0008987;6.77e-10;12!UBERON:0001851;2.61e-08;15!UBERON:0004211;6.22e-08;10!UBERON:0009773;6.22e-08;10!UBERON:0001231;6.22e-08;10!UBERON:0004810;6.22e-08;10!UBERON:0000065;7.81e-08;44!UBERON:0000072;1.37e-07;37!UBERON:0002113;2.01e-07;24!UBERON:0011143;2.01e-07;24!UBERON:0000074;8.56e-07;7!UBERON:0001229;8.56e-07;7!UBERON:0005911;9.38e-07;36!UBERON:0000489;9.82e-07;29 | |||
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| ||
|short_description=p@chr17:39919430..39919468,+ | |short_description=p@chr17:39919430..39919468,+ | ||
}} | }} |
Latest revision as of 16:49, 25 July 2015
Short description: | p@chr17:39919430..39919468, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39919430..39919468, + |
Coexpression cluster: | C1433_Alveolar_Sebocyte_Keratinocyte_Corneal_Renal_Urothelial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-44 | 253 |
endo-epithelial cell | 1.27e-16 | 42 |
endodermal cell | 6.16e-15 | 58 |
epithelial cell of nephron | 3.72e-12 | 15 |
epithelial cell of alimentary canal | 1.46e-11 | 20 |
kidney cell | 3.94e-10 | 17 |
kidney epithelial cell | 3.94e-10 | 17 |
kidney cortical cell | 4.93e-10 | 12 |
renal cortical epithelial cell | 4.93e-10 | 12 |
meso-epithelial cell | 4.58e-09 | 45 |
endothelial cell | 1.44e-08 | 36 |
kidney tubule cell | 3.29e-08 | 10 |
nephron tubule epithelial cell | 3.29e-08 | 10 |
glomerular cell | 7.64e-07 | 7 |
kidney corpuscule cell | 7.64e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.67e-11 | 106 |