FFCP PHASE1:Hg19::chr6:51952367..51952416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5314 | |EntrezGene=5314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9016 | |HGNC=9016 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000340994_5end | |association_with_transcript=0bp_to_ENST00000340994_5end | ||
|cluster_id=chr6:51952367..51952416,- | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_1_at_PKHD1_5end | |description=CAGE_peak_1_at_PKHD1_5end | ||
|id=chr6:51952367..51952416,- | |id=chr6:51952367..51952416,- | ||
|ontology_enrichment_celltype=CL:1000497!1.27e-15!18;CL:0002518!1.27e-15!18;CL:1000449!7.91e-12!16;CL:0002681!8.57e-12!13;CL:0002584!8.57e-12!13;CL:1000507!3.49e-10!12;CL:1000494!3.49e-10!12;CL:0000239!4.29e-09!3;CL:1000615!4.29e-09!3;CL:0002306!4.29e-09!3;CL:0000181!2.54e-07!12;CL:0000417!2.54e-07!12;CL:0000668!2.54e-07!12;CL:0000414!2.54e-07!12;CL:0000412!2.54e-07!12;CL:0000182!2.54e-07!12;CL:0000066!8.63e-07!254 | |ontology_enrichment_celltype=CL:1000497!1.27e-15!18;CL:0002518!1.27e-15!18;CL:1000449!7.91e-12!16;CL:0002681!8.57e-12!13;CL:0002584!8.57e-12!13;CL:1000507!3.49e-10!12;CL:1000494!3.49e-10!12;CL:0000239!4.29e-09!3;CL:1000615!4.29e-09!3;CL:0002306!4.29e-09!3;CL:0000181!2.54e-07!12;CL:0000417!2.54e-07!12;CL:0000668!2.54e-07!12;CL:0000414!2.54e-07!12;CL:0000412!2.54e-07!12;CL:0000182!2.54e-07!12;CL:0000066!8.63e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.02e-16;17!CL:0002518;2.02e-16;17!CL:1000507;2.09e-16;10!CL:1000494;2.09e-16;10!CL:0000239;5.30e-15;3!CL:1000615;5.30e-15;3!CL:0002306;5.30e-15;3!CL:1000449;9.46e-11;15!CL:0002681;1.11e-09;12!CL:0002584;1.11e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.13e-16,10;CL:1000494,2.13e-16,10;CL:1000497,2.16e-16,17;CL:0002518,2.16e-16,17;CL:0000239,5.43e-15,3;CL:1000615,5.43e-15,3;CL:0002306,5.43e-15,3;CL:1000449,9.55e-11,15;CL:0002681,1.22e-09,12;CL:0002584,1.22e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.17e-12;13!UBERON:0003104;4.70e-11;31!UBERON:0003918;4.40e-08;10!UBERON:0007687;4.40e-08;10!UBERON:0004161;4.00e-07;11 | |||
|ontology_enrichment_disease=DOID:299!3.04e-07!25;DOID:4468!8.59e-07!2 | |ontology_enrichment_disease=DOID:299!3.04e-07!25;DOID:4468!8.59e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;6.51e-11;2!DOID:299;1.37e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.67e-11,2;DOID:299,1.41e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005172!2.87e-28!55;UBERON:0005173!2.87e-28!55;UBERON:0002417!9.94e-25!61;UBERON:0000916!9.94e-25!61;UBERON:0005177!8.58e-21!107;UBERON:0001008!1.30e-20!45;UBERON:0009497!3.74e-20!25;UBERON:0000015!3.74e-20!25;UBERON:0002423!3.74e-20!25;UBERON:0006235!3.74e-20!25;UBERON:0004161!3.74e-20!25;UBERON:0000466!8.26e-20!126;UBERON:0000058!1.43e-19!26;UBERON:0002113!4.34e-19!27;UBERON:0003918!4.34e-19!27;UBERON:0005095!4.34e-19!27;UBERON:0007687!4.34e-19!27;UBERON:0006554!4.37e-19!44;UBERON:0000489!9.67e-18!32;UBERON:0005911!4.74e-17!82;UBERON:0004876!1.65e-16!20;UBERON:0009569!1.91e-16!113;UBERON:0009856!2.04e-16!26;UBERON:0009854!2.10e-16!23;UBERON:0003064!3.29e-16!37;UBERON:0003929!7.10e-16!54;UBERON:0000080!1.02e-15!18;UBERON:0002120!1.02e-15!18;UBERON:0004875!1.02e-15!18;UBERON:0005721!1.02e-15!18;UBERON:0005754!1.02e-15!18;UBERON:0007297!1.02e-15!18;UBERON:0007499!8.92e-15!25;UBERON:0008835!1.06e-14!22;UBERON:0003894!1.06e-14!22;UBERON:0004119!1.24e-14!169;UBERON:0000925!1.24e-14!169;UBERON:0006595!1.24e-14!169;UBERON:0006555!7.18e-14!17;UBERON:0005103!7.18e-14!17;UBERON:0000083!7.18e-14!17;UBERON:0009201!7.18e-14!17;UBERON:0004819!7.18e-14!17;UBERON:0006553!7.18e-14!17;UBERON:0003074!7.18e-14!17;UBERON:0003060!7.18e-14!17;UBERON:0002294!4.06e-13!7;UBERON:0001173!4.06e-13!7;UBERON:0004912!4.06e-13!7;UBERON:0003887!4.16e-13!21;UBERON:0004921!5.81e-13!129;UBERON:0004185!5.81e-13!129;UBERON:0001007!6.37e-13!155;UBERON:0001555!6.37e-13!155;UBERON:0007026!6.37e-13!155;UBERON:0003104!2.55e-12!238;UBERON:0009142!2.55e-12!238;UBERON:0004211!7.91e-12!16;UBERON:0001285!7.91e-12!16;UBERON:0007684!7.91e-12!16;UBERON:0003220!7.91e-12!16;UBERON:0004208!7.91e-12!16;UBERON:0000077!8.28e-12!130;UBERON:0001225!8.57e-12!13;UBERON:0008987!8.57e-12!13;UBERON:0003886!1.19e-11!63;UBERON:0002100!2.77e-11!216;UBERON:0005256!2.99e-10!143;UBERON:0009773!3.49e-10!12;UBERON:0001231!3.49e-10!12;UBERON:0004810!3.49e-10!12;UBERON:0000464!5.01e-10!104;UBERON:0002553!5.53e-10!70;UBERON:0002107!1.13e-09!19;UBERON:0006925!1.13e-09!19;UBERON:0008836!1.13e-09!19;UBERON:0001851!2.62e-09!16;UBERON:0000481!3.29e-09!347;UBERON:0006947!3.85e-09!3;UBERON:0004054!3.85e-09!3;UBERON:0006853!4.29e-09!3;UBERON:0007685!4.29e-09!3;UBERON:0004134!4.29e-09!3;UBERON:0000353!1.12e-08!17;UBERON:0002110!1.66e-08!3;UBERON:0006242!1.66e-08!3;UBERON:0005156!2.02e-08!59;UBERON:0000990!2.02e-08!59;UBERON:0003135!3.06e-08!11;UBERON:0003914!3.06e-08!118;UBERON:0003101!4.14e-08!22;UBERON:0000079!4.14e-08!22;UBERON:0003133!2.72e-07!48;UBERON:0005904!6.24e-07!4;UBERON:0000062!7.34e-07!511;UBERON:0004175!9.24e-07!25 | |ontology_enrichment_uberon=UBERON:0005172!2.87e-28!55;UBERON:0005173!2.87e-28!55;UBERON:0002417!9.94e-25!61;UBERON:0000916!9.94e-25!61;UBERON:0005177!8.58e-21!107;UBERON:0001008!1.30e-20!45;UBERON:0009497!3.74e-20!25;UBERON:0000015!3.74e-20!25;UBERON:0002423!3.74e-20!25;UBERON:0006235!3.74e-20!25;UBERON:0004161!3.74e-20!25;UBERON:0000466!8.26e-20!126;UBERON:0000058!1.43e-19!26;UBERON:0002113!4.34e-19!27;UBERON:0003918!4.34e-19!27;UBERON:0005095!4.34e-19!27;UBERON:0007687!4.34e-19!27;UBERON:0006554!4.37e-19!44;UBERON:0000489!9.67e-18!32;UBERON:0005911!4.74e-17!82;UBERON:0004876!1.65e-16!20;UBERON:0009569!1.91e-16!113;UBERON:0009856!2.04e-16!26;UBERON:0009854!2.10e-16!23;UBERON:0003064!3.29e-16!37;UBERON:0003929!7.10e-16!54;UBERON:0000080!1.02e-15!18;UBERON:0002120!1.02e-15!18;UBERON:0004875!1.02e-15!18;UBERON:0005721!1.02e-15!18;UBERON:0005754!1.02e-15!18;UBERON:0007297!1.02e-15!18;UBERON:0007499!8.92e-15!25;UBERON:0008835!1.06e-14!22;UBERON:0003894!1.06e-14!22;UBERON:0004119!1.24e-14!169;UBERON:0000925!1.24e-14!169;UBERON:0006595!1.24e-14!169;UBERON:0006555!7.18e-14!17;UBERON:0005103!7.18e-14!17;UBERON:0000083!7.18e-14!17;UBERON:0009201!7.18e-14!17;UBERON:0004819!7.18e-14!17;UBERON:0006553!7.18e-14!17;UBERON:0003074!7.18e-14!17;UBERON:0003060!7.18e-14!17;UBERON:0002294!4.06e-13!7;UBERON:0001173!4.06e-13!7;UBERON:0004912!4.06e-13!7;UBERON:0003887!4.16e-13!21;UBERON:0004921!5.81e-13!129;UBERON:0004185!5.81e-13!129;UBERON:0001007!6.37e-13!155;UBERON:0001555!6.37e-13!155;UBERON:0007026!6.37e-13!155;UBERON:0003104!2.55e-12!238;UBERON:0009142!2.55e-12!238;UBERON:0004211!7.91e-12!16;UBERON:0001285!7.91e-12!16;UBERON:0007684!7.91e-12!16;UBERON:0003220!7.91e-12!16;UBERON:0004208!7.91e-12!16;UBERON:0000077!8.28e-12!130;UBERON:0001225!8.57e-12!13;UBERON:0008987!8.57e-12!13;UBERON:0003886!1.19e-11!63;UBERON:0002100!2.77e-11!216;UBERON:0005256!2.99e-10!143;UBERON:0009773!3.49e-10!12;UBERON:0001231!3.49e-10!12;UBERON:0004810!3.49e-10!12;UBERON:0000464!5.01e-10!104;UBERON:0002553!5.53e-10!70;UBERON:0002107!1.13e-09!19;UBERON:0006925!1.13e-09!19;UBERON:0008836!1.13e-09!19;UBERON:0001851!2.62e-09!16;UBERON:0000481!3.29e-09!347;UBERON:0006947!3.85e-09!3;UBERON:0004054!3.85e-09!3;UBERON:0006853!4.29e-09!3;UBERON:0007685!4.29e-09!3;UBERON:0004134!4.29e-09!3;UBERON:0000353!1.12e-08!17;UBERON:0002110!1.66e-08!3;UBERON:0006242!1.66e-08!3;UBERON:0005156!2.02e-08!59;UBERON:0000990!2.02e-08!59;UBERON:0003135!3.06e-08!11;UBERON:0003914!3.06e-08!118;UBERON:0003101!4.14e-08!22;UBERON:0000079!4.14e-08!22;UBERON:0003133!2.72e-07!48;UBERON:0005904!6.24e-07!4;UBERON:0000062!7.34e-07!511;UBERON:0004175!9.24e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;4.33e-18;24!UBERON:0011143;4.33e-18;24!UBERON:0002423;3.65e-17;25!UBERON:0004211;2.09e-16;10!UBERON:0009773;2.09e-16;10!UBERON:0001231;2.09e-16;10!UBERON:0004810;2.09e-16;10!UBERON:0005172;9.74e-16;52!UBERON:0005173;9.74e-16;52!UBERON:0006853;5.30e-15;3!UBERON:0007685;5.30e-15;3!UBERON:0004134;5.30e-15;3!UBERON:0000489;1.20e-14;29!UBERON:0006554;4.25e-14;30!UBERON:0001008;4.25e-14;30!UBERON:0002417;1.87e-11;58!UBERON:0000916;1.87e-11;58!UBERON:0002294;4.96e-11;7!UBERON:0001173;4.96e-11;7!UBERON:0006555;9.46e-11;15!UBERON:0004819;9.46e-11;15!UBERON:0001285;9.46e-11;15!UBERON:0007684;9.46e-11;15!UBERON:0001225;1.11e-09;12!UBERON:0008987;1.11e-09;12!UBERON:0002107;1.60e-08;19!UBERON:0006925;1.60e-08;19!UBERON:0000058;5.65e-08;10!UBERON:0001851;1.08e-07;15!UBERON:0000353;1.08e-07;15!UBERON:0006947;1.09e-07;3!UBERON:0004054;1.09e-07;3!UBERON:0002110;2.74e-07;3!UBERON:0005409;6.14e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.04e-27,54;UBERON:0005173,1.04e-27,54;UBERON:0002417,1.69e-24,60;UBERON:0000916,1.69e-24,60;UBERON:0002113,3.12e-20,26;UBERON:0003918,3.12e-20,26;UBERON:0011143,3.12e-20,26;UBERON:0005095,3.12e-20,26;UBERON:0007687,3.12e-20,26;UBERON:0009497,3.21e-17,25;UBERON:0000015,3.21e-17,25;UBERON:0002423,3.21e-17,25;UBERON:0006235,3.21e-17,25;UBERON:0004161,3.21e-17,25;UBERON:0000489,1.29e-16,31;UBERON:0004810,2.13e-16,10;UBERON:0005177,3.49e-16,101;UBERON:0006853,5.43e-15,3;UBERON:0007685,5.43e-15,3;UBERON:0004134,5.43e-15,3;UBERON:0006555,1.02e-13,16;UBERON:0004819,1.02e-13,16;UBERON:0008835,1.14e-12,22;UBERON:0003894,1.14e-12,22;UBERON:0009569,1.53e-12,112;UBERON:0006554,2.69e-12,47;UBERON:0003929,3.14e-12,54;UBERON:0009854,4.60e-12,23;UBERON:0001008,5.46e-12,48;UBERON:0007499,5.33e-11,25;UBERON:0004211,9.55e-11,15;UBERON:0009773,9.55e-11,15;UBERON:0001231,9.55e-11,15;UBERON:0001285,9.55e-11,15;UBERON:0007684,9.55e-11,15;UBERON:0004208,9.55e-11,15;UBERON:0003104,1.40e-10,160;UBERON:0009142,1.40e-10,160;UBERON:0009856,1.57e-10,26;UBERON:0001225,1.22e-09,12;UBERON:0008987,1.22e-09,12;UBERON:0002107,1.38e-08,19;UBERON:0006925,1.38e-08,19;UBERON:0008836,1.38e-08,19;UBERON:0002294,1.43e-08,9;UBERON:0001173,1.43e-08,9;UBERON:0004912,1.43e-08,9;UBERON:0002100,1.76e-08,199;UBERON:0005911,1.98e-08,82;UBERON:0003914,5.84e-08,117;UBERON:0006947,1.11e-07,3;UBERON:0004054,1.11e-07,3;UBERON:0001851,1.16e-07,15;UBERON:0000353,1.16e-07,15;UBERON:0002110,2.49e-07,3;UBERON:0006242,2.49e-07,3;UBERON:0004921,9.15e-07,118 | |||
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| ||
|short_description=p1@PKHD1 | |short_description=p1@PKHD1 | ||
}} | }} |
Latest revision as of 05:44, 19 September 2015
Short description: | p1@PKHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKHD1_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 0bp_to_ENST00000340994_5end |
EntrezGene: | PKHD1 |
HGNC: | 9016 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.13e-16 | 10 |
nephron tubule epithelial cell | 2.13e-16 | 10 |
kidney cell | 2.16e-16 | 17 |
kidney epithelial cell | 2.16e-16 | 17 |
brush border epithelial cell | 5.43e-15 | 3 |
kidney cortex tubule cell | 5.43e-15 | 3 |
epithelial cell of proximal tubule | 5.43e-15 | 3 |
epithelial cell of nephron | 9.55e-11 | 15 |
kidney cortical cell | 1.22e-09 | 12 |
renal cortical epithelial cell | 1.22e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.67e-11 | 2 |
adenocarcinoma | 1.41e-08 | 25 |