FFCP PHASE1:Hg19::chr5:134369879..134369898,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5307 | |EntrezGene=5307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9004 | |HGNC=9004 | ||
|TSSclassifier=strong | |||
|UniProt=P78337 | |UniProt=P78337 | ||
|association_with_transcript=65bp_to_NM_002653,uc010jea.2_5end | |association_with_transcript=65bp_to_NM_002653,uc010jea.2_5end | ||
|cluster_id=chr5:134369879..134369898,- | |||
|coexpression_cluster_id=C2802 | |||
|description=CAGE_peak_2_at_PITX1_5end | |description=CAGE_peak_2_at_PITX1_5end | ||
|id=chr5:134369879..134369898,- | |id=chr5:134369879..134369898,- | ||
|ontology_enrichment_celltype=CL:0000066!1.69e-16!254;CL:0000223!1.38e-15!59;CL:0002076!2.05e-15!43;CL:0002251!2.47e-10!21 | |ontology_enrichment_celltype=CL:0000066!1.69e-16!254;CL:0000223!1.38e-15!59;CL:0002076!2.05e-15!43;CL:0002251!2.47e-10!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.87e-14;42!CL:0002251;4.33e-13;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.17e-18,42;CL:0000223,1.24e-18,58;CL:0000066,3.56e-16,253;CL:0002251,4.09e-13,20 | |||
|ontology_enrichment_development_v019=CL:0000223;1.53e-09;58!UBERON:0006595;2.48e-08;86!UBERON:0008947;3.57e-07;29 | |||
|ontology_enrichment_disease=DOID:162!1.82e-23!235;DOID:305!7.89e-23!106;DOID:0050687!3.98e-22!143;DOID:14566!4.33e-22!239;DOID:1749!3.23e-07!14 | |ontology_enrichment_disease=DOID:162!1.82e-23!235;DOID:305!7.89e-23!106;DOID:0050687!3.98e-22!143;DOID:14566!4.33e-22!239;DOID:1749!3.23e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.26e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.07e-21,235;DOID:305,5.47e-21,106;DOID:14566,4.77e-20,239;DOID:0050687,1.23e-18,143;DOID:1749,3.06e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.52e-32!169;UBERON:0000925!1.52e-32!169;UBERON:0006595!1.52e-32!169;UBERON:0001007!5.74e-31!155;UBERON:0001555!5.74e-31!155;UBERON:0007026!5.74e-31!155;UBERON:0004921!1.76e-26!129;UBERON:0004185!1.76e-26!129;UBERON:0000077!4.30e-22!130;UBERON:0000161!8.00e-17!35;UBERON:0001004!1.54e-16!72;UBERON:0003104!3.08e-14!238;UBERON:0009142!3.08e-14!238;UBERON:0001041!2.14e-13!98;UBERON:0001046!2.12e-11!19;UBERON:0005911!2.22e-11!82;UBERON:0000065!1.28e-10!53;UBERON:0000072!4.95e-10!46;UBERON:0000481!8.48e-10!347;UBERON:0008947!1.24e-09!38;UBERON:0003258!1.24e-09!38;UBERON:0000166!2.58e-09!21;UBERON:0000162!4.24e-09!14;UBERON:0001353!4.24e-09!14;UBERON:0000163!4.24e-09!14;UBERON:0006866!4.24e-09!14;UBERON:0000164!4.24e-09!14;UBERON:0000931!4.24e-09!14;UBERON:0000165!4.38e-09!28;UBERON:0000930!4.38e-09!28;UBERON:0005153!8.41e-09!37;UBERON:0002530!2.20e-08!59;UBERON:0003929!2.68e-08!54;UBERON:0004122!4.97e-08!15;UBERON:0000063!9.28e-08!97;UBERON:0003102!9.89e-08!95;UBERON:0000344!1.57e-07!12;UBERON:0002367!2.89e-07!11;UBERON:0010147!2.89e-07!11;UBERON:0009846!2.89e-07!11;UBERON:0003353!2.89e-07!11;UBERON:0004902!2.89e-07!11;UBERON:0003820!2.89e-07!11;UBERON:0009847!2.89e-07!11;UBERON:0005181!3.89e-07!35;UBERON:0001444!4.67e-07!48;UBERON:0000059!8.10e-07!11;UBERON:0005178!8.69e-07!34;UBERON:0002224!8.69e-07!34;UBERON:0005157!9.13e-07!51 | |ontology_enrichment_uberon=UBERON:0004119!1.52e-32!169;UBERON:0000925!1.52e-32!169;UBERON:0006595!1.52e-32!169;UBERON:0001007!5.74e-31!155;UBERON:0001555!5.74e-31!155;UBERON:0007026!5.74e-31!155;UBERON:0004921!1.76e-26!129;UBERON:0004185!1.76e-26!129;UBERON:0000077!4.30e-22!130;UBERON:0000161!8.00e-17!35;UBERON:0001004!1.54e-16!72;UBERON:0003104!3.08e-14!238;UBERON:0009142!3.08e-14!238;UBERON:0001041!2.14e-13!98;UBERON:0001046!2.12e-11!19;UBERON:0005911!2.22e-11!82;UBERON:0000065!1.28e-10!53;UBERON:0000072!4.95e-10!46;UBERON:0000481!8.48e-10!347;UBERON:0008947!1.24e-09!38;UBERON:0003258!1.24e-09!38;UBERON:0000166!2.58e-09!21;UBERON:0000162!4.24e-09!14;UBERON:0001353!4.24e-09!14;UBERON:0000163!4.24e-09!14;UBERON:0006866!4.24e-09!14;UBERON:0000164!4.24e-09!14;UBERON:0000931!4.24e-09!14;UBERON:0000165!4.38e-09!28;UBERON:0000930!4.38e-09!28;UBERON:0005153!8.41e-09!37;UBERON:0002530!2.20e-08!59;UBERON:0003929!2.68e-08!54;UBERON:0004122!4.97e-08!15;UBERON:0000063!9.28e-08!97;UBERON:0003102!9.89e-08!95;UBERON:0000344!1.57e-07!12;UBERON:0002367!2.89e-07!11;UBERON:0010147!2.89e-07!11;UBERON:0009846!2.89e-07!11;UBERON:0003353!2.89e-07!11;UBERON:0004902!2.89e-07!11;UBERON:0003820!2.89e-07!11;UBERON:0009847!2.89e-07!11;UBERON:0005181!3.89e-07!35;UBERON:0001444!4.67e-07!48;UBERON:0000059!8.10e-07!11;UBERON:0005178!8.69e-07!34;UBERON:0002224!8.69e-07!34;UBERON:0005157!9.13e-07!51 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;5.03e-17;33!UBERON:0001555;3.65e-13;54!UBERON:0005409;7.34e-11;22!UBERON:0000165;1.32e-10;28!UBERON:0001041;2.68e-10;14!UBERON:0000160;2.74e-09;17!UBERON:0000072;2.98e-09;37!UBERON:0000161;6.08e-09;19!UBERON:0000166;6.08e-09;19!UBERON:0001004;9.21e-09;65!UBERON:0000344;1.67e-08;20!UBERON:0001007;2.02e-08;81!UBERON:0002367;2.82e-08;11!UBERON:0010147;2.82e-08;11!UBERON:0000065;8.87e-08;44!UBERON:0000059;9.37e-08;11!UBERON:0001737;1.68e-07;9!UBERON:0001557;1.68e-07;9!UBERON:0003937;2.99e-07;12!UBERON:0005399;2.99e-07;12!UBERON:0004119;3.86e-07;158 | |||
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| ||
|short_description=p2@PITX1 | |short_description=p2@PITX1 | ||
}} | }} |
Latest revision as of 17:42, 24 September 2015
Short description: | p2@PITX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PITX1_5end |
Coexpression cluster: | C2802_esophagus_Prostate_biphenotypic_cervical_tonsil_Smooth_anaplastic |
Association with transcript: | 65bp_to_NM_002653, uc010jea.2_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.17e-18 | 42 |
endodermal cell | 1.24e-18 | 58 |
epithelial cell | 3.56e-16 | 253 |
epithelial cell of alimentary canal | 4.09e-13 | 20 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.07e-21 | 235 |
carcinoma | 5.47e-21 | 106 |
disease of cellular proliferation | 4.77e-20 | 239 |
cell type cancer | 1.23e-18 | 143 |
squamous cell carcinoma | 3.06e-08 | 14 |