FFCP PHASE1:Hg19::chr7:27183291..27183324,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3202 | |EntrezGene=3202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5106 | |HGNC=5106 | ||
|TSSclassifier=strong | |||
|UniProt=P20719 | |UniProt=P20719 | ||
|association_with_transcript=-4bp_to_ENST00000222726,NM_019102,uc003syn.1_5end | |association_with_transcript=-4bp_to_ENST00000222726,NM_019102,uc003syn.1_5end | ||
|cluster_id=chr7:27183291..27183324,- | |||
|coexpression_cluster_id=C4680 | |||
|description=CAGE_peak_1_at_HOXA5_5end | |description=CAGE_peak_1_at_HOXA5_5end | ||
|id=chr7:27183291..27183324,- | |id=chr7:27183291..27183324,- | ||
|ontology_enrichment_celltype=CL:0000222!1.14e-12!119;CL:1000497!5.87e-10!18;CL:0002518!5.87e-10!18;CL:0000076!2.92e-09!62;CL:0002139!2.95e-09!24;CL:0000071!3.21e-09!18;CL:0002546!3.21e-09!18;CL:1000449!8.24e-09!16;CL:0000213!1.52e-08!57;CL:0000215!1.52e-08!57;CL:1000507!3.93e-08!12;CL:1000494!3.93e-08!12;CL:0002334!2.38e-07!12;CL:0002078!3.10e-07!44;CL:0002681!3.98e-07!13;CL:0002584!3.98e-07!13;CL:0000115!4.08e-07!35 | |ontology_enrichment_celltype=CL:0000222!1.14e-12!119;CL:1000497!5.87e-10!18;CL:0002518!5.87e-10!18;CL:0000076!2.92e-09!62;CL:0002139!2.95e-09!24;CL:0000071!3.21e-09!18;CL:0002546!3.21e-09!18;CL:1000449!8.24e-09!16;CL:0000213!1.52e-08!57;CL:0000215!1.52e-08!57;CL:1000507!3.93e-08!12;CL:1000494!3.93e-08!12;CL:0002334!2.38e-07!12;CL:0002078!3.10e-07!44;CL:0002681!3.98e-07!13;CL:0002584!3.98e-07!13;CL:0000115!4.08e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.50e-13;17!CL:0002518;3.50e-13;17!CL:1000449;1.62e-11;15!CL:0000071;7.18e-10;18!CL:1000507;2.53e-09;10!CL:1000494;2.53e-09;10!CL:0002681;4.75e-09;12!CL:0002584;4.75e-09;12!CL:0002334;1.48e-08;12!CL:0002543;6.79e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.36e-13,17;CL:0002518,2.36e-13,17;CL:1000449,1.16e-11,15;CL:0000071,1.50e-09,18;CL:0002546,1.50e-09,18;CL:1000507,1.53e-09,10;CL:1000494,1.53e-09,10;CL:0002681,3.53e-09,12;CL:0002584,3.53e-09,12;CL:0000222,4.83e-09,121;CL:0002334,7.15e-09,12;CL:0000213,1.27e-07,58;CL:0000215,1.27e-07,58;CL:0002543,7.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.18e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!2.30e-14!113;UBERON:0002100!7.18e-13!216;UBERON:0000489!1.79e-12!32;UBERON:0003914!1.07e-11!118;UBERON:0002113!5.38e-11!27;UBERON:0003918!5.38e-11!27;UBERON:0005095!5.38e-11!27;UBERON:0007687!5.38e-11!27;UBERON:0001008!8.01e-11!45;UBERON:0006554!2.15e-10!44;UBERON:0000080!4.83e-10!18;UBERON:0002120!4.83e-10!18;UBERON:0004875!4.83e-10!18;UBERON:0005721!4.83e-10!18;UBERON:0005754!4.83e-10!18;UBERON:0007297!4.83e-10!18;UBERON:0005177!5.34e-10!107;UBERON:0003887!9.35e-10!21;UBERON:0006555!1.53e-09!17;UBERON:0005103!1.53e-09!17;UBERON:0000083!1.53e-09!17;UBERON:0009201!1.53e-09!17;UBERON:0004819!1.53e-09!17;UBERON:0006553!1.53e-09!17;UBERON:0003074!1.53e-09!17;UBERON:0003060!1.53e-09!17;UBERON:0002417!2.54e-09!61;UBERON:0000916!2.54e-09!61;UBERON:0001986!3.21e-09!18;UBERON:0004638!3.21e-09!18;UBERON:0004852!3.21e-09!18;UBERON:0004876!3.52e-09!20;UBERON:0000487!5.67e-09!22;UBERON:0004211!8.24e-09!16;UBERON:0001285!8.24e-09!16;UBERON:0007684!8.24e-09!16;UBERON:0003220!8.24e-09!16;UBERON:0004208!8.24e-09!16;UBERON:0001981!1.11e-08!60;UBERON:0007500!1.11e-08!60;UBERON:0004537!1.11e-08!60;UBERON:0006965!1.11e-08!60;UBERON:0000490!2.88e-08!138;UBERON:0000055!3.18e-08!69;UBERON:0009773!3.93e-08!12;UBERON:0001231!3.93e-08!12;UBERON:0004810!3.93e-08!12;UBERON:0000926!7.94e-08!448;UBERON:0004120!7.94e-08!448;UBERON:0006603!7.94e-08!448;UBERON:0003064!1.24e-07!37;UBERON:0006914!1.29e-07!25;UBERON:0005172!1.70e-07!55;UBERON:0005173!1.70e-07!55;UBERON:0003886!2.21e-07!63;UBERON:0003103!2.92e-07!69;UBERON:0001225!3.98e-07!13;UBERON:0008987!3.98e-07!13;UBERON:0000058!6.31e-07!26;UBERON:0000464!7.01e-07!104;UBERON:0001637!9.81e-07!42;UBERON:0003509!9.81e-07!42;UBERON:0004572!9.81e-07!42 | |ontology_enrichment_uberon=UBERON:0009569!2.30e-14!113;UBERON:0002100!7.18e-13!216;UBERON:0000489!1.79e-12!32;UBERON:0003914!1.07e-11!118;UBERON:0002113!5.38e-11!27;UBERON:0003918!5.38e-11!27;UBERON:0005095!5.38e-11!27;UBERON:0007687!5.38e-11!27;UBERON:0001008!8.01e-11!45;UBERON:0006554!2.15e-10!44;UBERON:0000080!4.83e-10!18;UBERON:0002120!4.83e-10!18;UBERON:0004875!4.83e-10!18;UBERON:0005721!4.83e-10!18;UBERON:0005754!4.83e-10!18;UBERON:0007297!4.83e-10!18;UBERON:0005177!5.34e-10!107;UBERON:0003887!9.35e-10!21;UBERON:0006555!1.53e-09!17;UBERON:0005103!1.53e-09!17;UBERON:0000083!1.53e-09!17;UBERON:0009201!1.53e-09!17;UBERON:0004819!1.53e-09!17;UBERON:0006553!1.53e-09!17;UBERON:0003074!1.53e-09!17;UBERON:0003060!1.53e-09!17;UBERON:0002417!2.54e-09!61;UBERON:0000916!2.54e-09!61;UBERON:0001986!3.21e-09!18;UBERON:0004638!3.21e-09!18;UBERON:0004852!3.21e-09!18;UBERON:0004876!3.52e-09!20;UBERON:0000487!5.67e-09!22;UBERON:0004211!8.24e-09!16;UBERON:0001285!8.24e-09!16;UBERON:0007684!8.24e-09!16;UBERON:0003220!8.24e-09!16;UBERON:0004208!8.24e-09!16;UBERON:0001981!1.11e-08!60;UBERON:0007500!1.11e-08!60;UBERON:0004537!1.11e-08!60;UBERON:0006965!1.11e-08!60;UBERON:0000490!2.88e-08!138;UBERON:0000055!3.18e-08!69;UBERON:0009773!3.93e-08!12;UBERON:0001231!3.93e-08!12;UBERON:0004810!3.93e-08!12;UBERON:0000926!7.94e-08!448;UBERON:0004120!7.94e-08!448;UBERON:0006603!7.94e-08!448;UBERON:0003064!1.24e-07!37;UBERON:0006914!1.29e-07!25;UBERON:0005172!1.70e-07!55;UBERON:0005173!1.70e-07!55;UBERON:0003886!2.21e-07!63;UBERON:0003103!2.92e-07!69;UBERON:0001225!3.98e-07!13;UBERON:0008987!3.98e-07!13;UBERON:0000058!6.31e-07!26;UBERON:0000464!7.01e-07!104;UBERON:0001637!9.81e-07!42;UBERON:0003509!9.81e-07!42;UBERON:0004572!9.81e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000489;2.76e-16;29!UBERON:0002113;6.14e-14;24!UBERON:0011143;6.14e-14;24!UBERON:0006554;3.96e-13;30!UBERON:0001008;3.96e-13;30!UBERON:0006555;1.62e-11;15!UBERON:0004819;1.62e-11;15!UBERON:0001285;1.62e-11;15!UBERON:0007684;1.62e-11;15!UBERON:0000487;2.39e-10;22!UBERON:0004638;7.18e-10;18!UBERON:0001986;7.18e-10;18!UBERON:0004852;7.18e-10;18!UBERON:0004211;2.53e-09;10!UBERON:0009773;2.53e-09;10!UBERON:0001231;2.53e-09;10!UBERON:0004810;2.53e-09;10!UBERON:0001225;4.75e-09;12!UBERON:0008987;4.75e-09;12!UBERON:0006914;1.67e-08;25!UBERON:0000353;5.53e-08;15!UBERON:0003914;6.47e-08;74!UBERON:0009569;3.20e-07;110!UBERON:0002417;3.99e-07;58!UBERON:0000916;3.99e-07;58!UBERON:0000025;8.33e-07;93 | |||
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| ||
|short_description=p1@HOXA5 | |short_description=p1@HOXA5 | ||
}} | }} |
Latest revision as of 01:30, 18 September 2015
Short description: | p1@HOXA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA5_5end |
Coexpression cluster: | C4680_Smooth_clear_gastric_Mesothelial_glioma_rectum_melanoma |
Association with transcript: | -4bp_to_ENST00000222726, NM_019102, uc003syn.1_5end |
EntrezGene: | HOXA5 |
HGNC: | 5106 |
UniProt: | P20719 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.36e-13 | 17 |
kidney epithelial cell | 2.36e-13 | 17 |
epithelial cell of nephron | 1.16e-11 | 15 |
blood vessel endothelial cell | 1.50e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.50e-09 | 18 |
kidney tubule cell | 1.53e-09 | 10 |
nephron tubule epithelial cell | 1.53e-09 | 10 |
kidney cortical cell | 3.53e-09 | 12 |
renal cortical epithelial cell | 3.53e-09 | 12 |
mesodermal cell | 4.83e-09 | 121 |
preadipocyte | 7.15e-09 | 12 |
lining cell | 1.27e-07 | 58 |
barrier cell | 1.27e-07 | 58 |
vein endothelial cell | 7.02e-07 | 6 |