FFCP PHASE1:Hg19::chr6:24358264..24358295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51473 | |EntrezGene=51473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18141 | |HGNC=18141 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHG0,E9PGI5 | |UniProt=Q9UHG0,E9PGI5 | ||
|association_with_transcript=0bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | |association_with_transcript=0bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | ||
|cluster_id=chr6:24358264..24358295,- | |||
|coexpression_cluster_id=C860 | |||
|description=CAGE_peak_2_at_DCDC2_5end | |description=CAGE_peak_2_at_DCDC2_5end | ||
|id=chr6:24358264..24358295,- | |id=chr6:24358264..24358295,- | ||
|ontology_enrichment_celltype=CL:1000497!5.10e-14!18;CL:0002518!5.10e-14!18;CL:1000449!5.98e-12!16;CL:1000507!1.23e-10!12;CL:1000494!1.23e-10!12;CL:0002681!1.12e-08!13;CL:0002584!1.12e-08!13;CL:0000066!1.32e-08!254 | |ontology_enrichment_celltype=CL:1000497!5.10e-14!18;CL:0002518!5.10e-14!18;CL:1000449!5.98e-12!16;CL:1000507!1.23e-10!12;CL:1000494!1.23e-10!12;CL:0002681!1.12e-08!13;CL:0002584!1.12e-08!13;CL:0000066!1.32e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.78e-22;17!CL:0002518;1.78e-22;17!CL:1000507;1.11e-21;10!CL:1000494;1.11e-21;10!CL:1000449;5.92e-19;15!CL:0002681;2.34e-13;12!CL:0002584;2.34e-13;12!CL:0002149;3.83e-09;6!CL:0002255;3.83e-09;6!CL:0000239;1.08e-07;3!CL:1000615;1.08e-07;3!CL:0002306;1.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.66e-22,17;CL:0002518,1.66e-22,17;CL:1000507,1.11e-21,10;CL:1000494,1.11e-21,10;CL:1000449,5.66e-19,15;CL:0002681,2.22e-13,12;CL:0002584,2.22e-13,12;CL:0000066,2.74e-11,253;CL:0002149,3.97e-09,6;CL:0002255,3.97e-09,6;CL:0000239,1.08e-07,3;CL:1000615,1.08e-07,3;CL:0002306,1.08e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.52e-11;31!UBERON:0009497;7.69e-09;13!UBERON:0004161;1.68e-08;11!UBERON:0001041;4.32e-08;30!UBERON:0007123;6.30e-07;5!UBERON:0003918;7.99e-07;10!UBERON:0007687;7.99e-07;10!UBERON:0005795;9.73e-07;10 | |||
|ontology_enrichment_disease=DOID:299!1.11e-13!25;DOID:193!1.35e-13!29;DOID:120!2.67e-12!27;DOID:305!3.53e-10!106;DOID:0050687!4.57e-10!143;DOID:2394!8.53e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:193;1.62e-18;29!DOID:299;3.54e-18;25!DOID:120;6.33e-18;27!DOID:3001;3.83e-09;6!DOID:2394;8.48e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:193,2.04e-18,29;DOID:299,2.92e-18,25;DOID:120,7.93e-18,27;DOID:0050687,3.11e-11,143;DOID:305,2.29e-10,106;DOID:162,7.03e-10,235;DOID:14566,2.10e-09,239;DOID:3001,3.97e-09,6;DOID:2394,9.11e-08,14;DOID:7,4.95e-07,39;DOID:0050686,6.06e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0005172!7.60e-17!55;UBERON:0005173!7.60e-17!55;UBERON:0002113!1.32e-16!27;UBERON:0003918!1.32e-16!27;UBERON:0005095!1.32e-16!27;UBERON:0007687!1.32e-16!27;UBERON:0006554!4.94e-16!44;UBERON:0000466!1.69e-15!126;UBERON:0001008!1.90e-15!45;UBERON:0002553!1.53e-14!70;UBERON:0003064!3.61e-14!37;UBERON:0000489!4.34e-14!32;UBERON:0002417!5.08e-14!61;UBERON:0000916!5.08e-14!61;UBERON:0000080!1.02e-13!18;UBERON:0002120!1.02e-13!18;UBERON:0004875!1.02e-13!18;UBERON:0005721!1.02e-13!18;UBERON:0005754!1.02e-13!18;UBERON:0007297!1.02e-13!18;UBERON:0003886!2.03e-13!63;UBERON:0000464!4.98e-13!104;UBERON:0006555!5.23e-13!17;UBERON:0005103!5.23e-13!17;UBERON:0000083!5.23e-13!17;UBERON:0009201!5.23e-13!17;UBERON:0004819!5.23e-13!17;UBERON:0006553!5.23e-13!17;UBERON:0003074!5.23e-13!17;UBERON:0003060!5.23e-13!17;UBERON:0005177!1.21e-12!107;UBERON:0005156!2.34e-12!59;UBERON:0000990!2.34e-12!59;UBERON:0004211!5.98e-12!16;UBERON:0001285!5.98e-12!16;UBERON:0007684!5.98e-12!16;UBERON:0003220!5.98e-12!16;UBERON:0004208!5.98e-12!16;UBERON:0004876!8.25e-12!20;UBERON:0000058!9.76e-12!26;UBERON:0009569!5.08e-11!113;UBERON:0003887!5.35e-11!21;UBERON:0009773!1.23e-10!12;UBERON:0001231!1.23e-10!12;UBERON:0004810!1.23e-10!12;UBERON:0003929!2.37e-10!54;UBERON:0000481!3.89e-10!347;UBERON:0007625!8.08e-10!11;UBERON:0003133!1.12e-09!48;UBERON:0005911!1.94e-09!82;UBERON:0000062!1.95e-09!511;UBERON:0001851!2.52e-09!16;UBERON:0001048!5.45e-09!168;UBERON:0001225!1.12e-08!13;UBERON:0008987!1.12e-08!13;UBERON:0002530!2.21e-08!59;UBERON:0007023!2.93e-07!115;UBERON:0003101!3.87e-07!22;UBERON:0000079!3.87e-07!22;UBERON:0000475!4.17e-07!365;UBERON:0000991!8.82e-07!21;UBERON:0009196!8.82e-07!21;UBERON:0009117!8.82e-07!21;UBERON:0005564!8.82e-07!21;UBERON:0003134!9.04e-07!37;UBERON:0000474!9.04e-07!37;UBERON:0000483!9.36e-07!309;UBERON:0002368!9.72e-07!35 | |ontology_enrichment_uberon=UBERON:0005172!7.60e-17!55;UBERON:0005173!7.60e-17!55;UBERON:0002113!1.32e-16!27;UBERON:0003918!1.32e-16!27;UBERON:0005095!1.32e-16!27;UBERON:0007687!1.32e-16!27;UBERON:0006554!4.94e-16!44;UBERON:0000466!1.69e-15!126;UBERON:0001008!1.90e-15!45;UBERON:0002553!1.53e-14!70;UBERON:0003064!3.61e-14!37;UBERON:0000489!4.34e-14!32;UBERON:0002417!5.08e-14!61;UBERON:0000916!5.08e-14!61;UBERON:0000080!1.02e-13!18;UBERON:0002120!1.02e-13!18;UBERON:0004875!1.02e-13!18;UBERON:0005721!1.02e-13!18;UBERON:0005754!1.02e-13!18;UBERON:0007297!1.02e-13!18;UBERON:0003886!2.03e-13!63;UBERON:0000464!4.98e-13!104;UBERON:0006555!5.23e-13!17;UBERON:0005103!5.23e-13!17;UBERON:0000083!5.23e-13!17;UBERON:0009201!5.23e-13!17;UBERON:0004819!5.23e-13!17;UBERON:0006553!5.23e-13!17;UBERON:0003074!5.23e-13!17;UBERON:0003060!5.23e-13!17;UBERON:0005177!1.21e-12!107;UBERON:0005156!2.34e-12!59;UBERON:0000990!2.34e-12!59;UBERON:0004211!5.98e-12!16;UBERON:0001285!5.98e-12!16;UBERON:0007684!5.98e-12!16;UBERON:0003220!5.98e-12!16;UBERON:0004208!5.98e-12!16;UBERON:0004876!8.25e-12!20;UBERON:0000058!9.76e-12!26;UBERON:0009569!5.08e-11!113;UBERON:0003887!5.35e-11!21;UBERON:0009773!1.23e-10!12;UBERON:0001231!1.23e-10!12;UBERON:0004810!1.23e-10!12;UBERON:0003929!2.37e-10!54;UBERON:0000481!3.89e-10!347;UBERON:0007625!8.08e-10!11;UBERON:0003133!1.12e-09!48;UBERON:0005911!1.94e-09!82;UBERON:0000062!1.95e-09!511;UBERON:0001851!2.52e-09!16;UBERON:0001048!5.45e-09!168;UBERON:0001225!1.12e-08!13;UBERON:0008987!1.12e-08!13;UBERON:0002530!2.21e-08!59;UBERON:0007023!2.93e-07!115;UBERON:0003101!3.87e-07!22;UBERON:0000079!3.87e-07!22;UBERON:0000475!4.17e-07!365;UBERON:0000991!8.82e-07!21;UBERON:0009196!8.82e-07!21;UBERON:0009117!8.82e-07!21;UBERON:0005564!8.82e-07!21;UBERON:0003134!9.04e-07!37;UBERON:0000474!9.04e-07!37;UBERON:0000483!9.36e-07!309;UBERON:0002368!9.72e-07!35 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.91e-25,26;UBERON:0003918,2.91e-25,26;UBERON:0011143,2.91e-25,26;UBERON:0005095,2.91e-25,26;UBERON:0007687,2.91e-25,26;UBERON:0005172,4.33e-23,54;UBERON:0005173,4.33e-23,54;UBERON:0004810,1.11e-21,10;UBERON:0006555,8.82e-21,16;UBERON:0004819,8.82e-21,16;UBERON:0000489,3.07e-20,31;UBERON:0002417,6.42e-20,60;UBERON:0000916,6.42e-20,60;UBERON:0004211,5.66e-19,15;UBERON:0009773,5.66e-19,15;UBERON:0001231,5.66e-19,15;UBERON:0001285,5.66e-19,15;UBERON:0007684,5.66e-19,15;UBERON:0004208,5.66e-19,15;UBERON:0009569,7.54e-17,112;UBERON:0005177,3.10e-16,101;UBERON:0001225,2.22e-13,12;UBERON:0008987,2.22e-13,12;UBERON:0006554,6.74e-13,47;UBERON:0001851,1.25e-12,15;UBERON:0001008,1.64e-12,48;UBERON:0000353,2.80e-10,15;UBERON:0002100,2.73e-08,199;UBERON:0006853,1.08e-07,3;UBERON:0007685,1.08e-07,3;UBERON:0004134,1.08e-07,3;UBERON:0005911,1.73e-07,82;UBERON:0003134,2.17e-07,37;UBERON:0000474,2.17e-07,37;UBERON:0003103,3.65e-07,68;UBERON:0005795,4.89e-07,22;UBERON:0002046,6.50e-07,5;UBERON:0004117,6.50e-07,5;UBERON:0007689,6.50e-07,5;UBERON:0007123,6.50e-07,5;UBERON:0003091,6.50e-07,5;UBERON:0003133,9.34e-07,48 | |||
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| ||
|short_description=p2@DCDC2 | |short_description=p2@DCDC2 | ||
}} | }} |
Latest revision as of 05:45, 17 September 2015
Short description: | p2@DCDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DCDC2_5end |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000378454, ENST00000451359, NM_016356, uc003ndx.2_5end |
EntrezGene: | DCDC2 |
HGNC: | 18141 |
UniProt: | Q9UHG0E9PGI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.66e-22 | 17 |
kidney epithelial cell | 1.66e-22 | 17 |
kidney tubule cell | 1.11e-21 | 10 |
nephron tubule epithelial cell | 1.11e-21 | 10 |
epithelial cell of nephron | 5.66e-19 | 15 |
kidney cortical cell | 2.22e-13 | 12 |
renal cortical epithelial cell | 2.22e-13 | 12 |
epithelial cell | 2.74e-11 | 253 |
epithelial cell of uterus | 3.97e-09 | 6 |
stromal cell of endometrium | 3.97e-09 | 6 |
brush border epithelial cell | 1.08e-07 | 3 |
kidney cortex tubule cell | 1.08e-07 | 3 |
epithelial cell of proximal tubule | 1.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 2.04e-18 | 29 |
adenocarcinoma | 2.92e-18 | 25 |
female reproductive organ cancer | 7.93e-18 | 27 |
cell type cancer | 3.11e-11 | 143 |
carcinoma | 2.29e-10 | 106 |
cancer | 7.03e-10 | 235 |
disease of cellular proliferation | 2.10e-09 | 239 |
female reproductive endometrioid cancer | 3.97e-09 | 6 |
ovarian cancer | 9.11e-08 | 14 |
disease of anatomical entity | 4.95e-07 | 39 |
organ system cancer | 6.06e-07 | 137 |