FFCP PHASE1:Hg19::chr6:24358088..24358099,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51473 | |EntrezGene=51473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18141 | |HGNC=18141 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHG0,E9PGI5 | |UniProt=Q9UHG0,E9PGI5 | ||
|association_with_transcript=180bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | |association_with_transcript=180bp_to_ENST00000378454,ENST00000451359,NM_016356,uc003ndx.2_5end | ||
|cluster_id=chr6:24358088..24358099,- | |||
|coexpression_cluster_id=C860 | |||
|description=CAGE_peak_5_at_DCDC2_5end | |description=CAGE_peak_5_at_DCDC2_5end | ||
|id=chr6:24358088..24358099,- | |id=chr6:24358088..24358099,- | ||
|ontology_enrichment_celltype=CL:1000497!8.51e-23!18;CL:0002518!8.51e-23!18;CL:1000449!4.15e-19!16;CL:1000507!1.26e-18!12;CL:1000494!1.26e-18!12;CL:0000066!3.12e-13!254;CL:0002681!3.75e-13!13;CL:0002584!3.75e-13!13;CL:0000239!6.11e-08!3;CL:1000615!6.11e-08!3;CL:0002306!6.11e-08!3 | |ontology_enrichment_celltype=CL:1000497!8.51e-23!18;CL:0002518!8.51e-23!18;CL:1000449!4.15e-19!16;CL:1000507!1.26e-18!12;CL:1000494!1.26e-18!12;CL:0000066!3.12e-13!254;CL:0002681!3.75e-13!13;CL:0002584!3.75e-13!13;CL:0000239!6.11e-08!3;CL:1000615!6.11e-08!3;CL:0002306!6.11e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.71e-33;10!CL:1000494;1.71e-33;10!CL:1000449;6.27e-22;15!CL:1000497;3.32e-19;17!CL:0002518;3.32e-19;17!CL:0000650;2.06e-11;2!CL:1000500;2.06e-11;2!CL:1000618;2.06e-11;2!CL:1001318;2.06e-11;2!CL:0002173;2.06e-11;2!CL:0002681;4.29e-11;12!CL:0002584;4.29e-11;12!CL:0000182;7.54e-11;12!CL:0002149;1.26e-08;6!CL:0002255;1.26e-08;6!CL:0000239;2.91e-08;3!CL:1000615;2.91e-08;3!CL:0002306;2.91e-08;3!CL:0000313;4.45e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.42e-33,10;CL:1000494,2.42e-33,10;CL:1000449,7.86e-22,15;CL:1000497,4.04e-19,17;CL:0002518,4.04e-19,17;CL:0000066,8.28e-12,253;CL:0000650,3.58e-11,2;CL:1000500,3.58e-11,2;CL:1000618,3.58e-11,2;CL:1001318,3.58e-11,2;CL:0002173,3.58e-11,2;CL:0002681,6.04e-11,12;CL:0002584,6.04e-11,12;CL:0000182,7.47e-11,12;CL:0002149,1.21e-08,6;CL:0002255,1.21e-08,6;CL:0000239,3.43e-08,3;CL:1000615,3.43e-08,3;CL:0002306,3.43e-08,3;CL:0000223,2.24e-07,58;CL:0000313,4.33e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.42e-12;11!UBERON:0009497;5.38e-10;13!UBERON:0003104;1.10e-09;31 | |||
|ontology_enrichment_disease=DOID:299!1.28e-17!25;DOID:305!6.22e-13!106;DOID:0050687!2.78e-12!143;DOID:120!3.20e-08!27;DOID:14566!1.62e-07!239;DOID:193!1.76e-07!29;DOID:162!2.18e-07!235;DOID:7!3.89e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;8.42e-20;25!DOID:4468;1.05e-11;2!DOID:120;1.98e-11;27!DOID:193;1.48e-10;29!DOID:7;4.36e-09;39!DOID:3001;1.26e-08;6!DOID:2152;4.45e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:299,7.15e-20,25;DOID:4468,8.98e-12,2;DOID:120,1.84e-11,27;DOID:193,1.38e-10,29;DOID:7,1.42e-09,39;DOID:305,1.61e-09,106;DOID:0050687,1.87e-09,143;DOID:3001,1.21e-08,6;DOID:2152,4.33e-07,1;DOID:162,5.16e-07,235;DOID:14566,9.06e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.97e-26!27;UBERON:0003918!1.97e-26!27;UBERON:0005095!1.97e-26!27;UBERON:0007687!1.97e-26!27;UBERON:0005172!3.08e-25!55;UBERON:0005173!3.08e-25!55;UBERON:0002417!6.28e-22!61;UBERON:0000916!6.28e-22!61;UBERON:0000489!2.04e-21!32;UBERON:0006555!4.99e-21!17;UBERON:0005103!4.99e-21!17;UBERON:0000083!4.99e-21!17;UBERON:0009201!4.99e-21!17;UBERON:0004819!4.99e-21!17;UBERON:0006553!4.99e-21!17;UBERON:0003074!4.99e-21!17;UBERON:0003060!4.99e-21!17;UBERON:0000080!1.17e-19!18;UBERON:0002120!1.17e-19!18;UBERON:0004875!1.17e-19!18;UBERON:0005721!1.17e-19!18;UBERON:0005754!1.17e-19!18;UBERON:0007297!1.17e-19!18;UBERON:0006554!3.11e-19!44;UBERON:0004211!4.15e-19!16;UBERON:0001285!4.15e-19!16;UBERON:0007684!4.15e-19!16;UBERON:0003220!4.15e-19!16;UBERON:0004208!4.15e-19!16;UBERON:0001008!1.15e-18!45;UBERON:0009773!1.26e-18!12;UBERON:0001231!1.26e-18!12;UBERON:0004810!1.26e-18!12;UBERON:0009569!3.18e-18!113;UBERON:0004876!2.46e-17!20;UBERON:0005177!4.63e-17!107;UBERON:0000058!1.36e-16!26;UBERON:0003887!2.43e-16!21;UBERON:0003064!1.49e-15!37;UBERON:0001851!1.92e-15!16;UBERON:0001225!3.75e-13!13;UBERON:0008987!3.75e-13!13;UBERON:0000466!5.14e-13!126;UBERON:0003886!1.62e-10!63;UBERON:0000353!1.37e-09!17;UBERON:0000464!3.69e-09!104;UBERON:0002553!6.41e-09!70;UBERON:0005911!9.45e-09!82;UBERON:0002100!1.01e-08!216;UBERON:0003929!1.35e-08!54;UBERON:0003103!4.96e-08!69;UBERON:0006853!6.11e-08!3;UBERON:0007685!6.11e-08!3;UBERON:0004134!6.11e-08!3;UBERON:0002368!6.12e-08!35;UBERON:0000481!9.82e-08!347;UBERON:0002046!2.34e-07!5;UBERON:0004117!2.34e-07!5;UBERON:0007689!2.34e-07!5;UBERON:0007123!2.34e-07!5;UBERON:0003091!2.34e-07!5;UBERON:0003104!6.40e-07!238;UBERON:0009142!6.40e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.71e-33;10!UBERON:0009773;1.71e-33;10!UBERON:0001231;1.71e-33;10!UBERON:0004810;1.71e-33;10!UBERON:0006555;6.27e-22;15!UBERON:0004819;6.27e-22;15!UBERON:0001285;6.27e-22;15!UBERON:0007684;6.27e-22;15!UBERON:0002113;1.53e-20;24!UBERON:0011143;1.53e-20;24!UBERON:0000489;1.11e-16;29!UBERON:0006554;4.61e-16;30!UBERON:0001008;4.61e-16;30!UBERON:0005172;1.19e-14;52!UBERON:0005173;1.19e-14;52!UBERON:0001851;2.57e-12;15!UBERON:0003567;2.06e-11;2!UBERON:0003838;2.06e-11;2!UBERON:0003586;2.06e-11;2!UBERON:0005169;2.06e-11;2!UBERON:0002321;2.06e-11;2!UBERON:0005215;2.06e-11;2!UBERON:0002303;2.06e-11;2!UBERON:0002319;2.06e-11;2!UBERON:0001225;4.29e-11;12!UBERON:0008987;4.29e-11;12!UBERON:0002417;1.31e-10;58!UBERON:0000916;1.31e-10;58!UBERON:0000353;8.03e-09;15!UBERON:0006853;2.91e-08;3!UBERON:0007685;2.91e-08;3!UBERON:0004134;2.91e-08;3!UBERON:0004911;4.45e-07;1!UBERON:0002107;9.33e-07;19!UBERON:0006925;9.33e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.42e-33,10;UBERON:0006555,1.25e-25,16;UBERON:0004819,1.25e-25,16;UBERON:0005172,1.50e-24,54;UBERON:0005173,1.50e-24,54;UBERON:0002113,1.09e-22,26;UBERON:0003918,1.09e-22,26;UBERON:0011143,1.09e-22,26;UBERON:0005095,1.09e-22,26;UBERON:0007687,1.09e-22,26;UBERON:0004211,7.86e-22,15;UBERON:0009773,7.86e-22,15;UBERON:0001231,7.86e-22,15;UBERON:0001285,7.86e-22,15;UBERON:0007684,7.86e-22,15;UBERON:0004208,7.86e-22,15;UBERON:0002417,1.01e-21,60;UBERON:0000916,1.01e-21,60;UBERON:0000489,1.10e-18,31;UBERON:0006554,7.50e-14,47;UBERON:0001008,1.63e-13,48;UBERON:0009569,6.72e-13,112;UBERON:0001851,3.68e-12,15;UBERON:0005177,2.08e-11,101;UBERON:0003567,3.58e-11,2;UBERON:0003838,3.58e-11,2;UBERON:0003586,3.58e-11,2;UBERON:0005169,3.58e-11,2;UBERON:0002321,3.58e-11,2;UBERON:0005215,3.58e-11,2;UBERON:0002303,3.58e-11,2;UBERON:0002319,3.58e-11,2;UBERON:0001225,6.04e-11,12;UBERON:0008987,6.04e-11,12;UBERON:0000353,1.05e-08,15;UBERON:0006853,3.43e-08,3;UBERON:0007685,3.43e-08,3;UBERON:0004134,3.43e-08,3;UBERON:0003104,8.42e-08,160;UBERON:0009142,8.42e-08,160;UBERON:0003103,2.19e-07,68;UBERON:0004911,4.33e-07,1;UBERON:0002107,9.27e-07,19;UBERON:0006925,9.27e-07,19;UBERON:0008836,9.27e-07,19 | |||
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| ||
|short_description=p5@DCDC2 | |short_description=p5@DCDC2 | ||
}} | }} |
Latest revision as of 05:39, 17 September 2015
Short description: | p5@DCDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DCDC2_5end |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | 180bp_to_ENST00000378454, ENST00000451359, NM_016356, uc003ndx.2_5end |
EntrezGene: | DCDC2 |
HGNC: | 18141 |
UniProt: | Q9UHG0E9PGI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.42e-33 | 10 |
nephron tubule epithelial cell | 2.42e-33 | 10 |
epithelial cell of nephron | 7.86e-22 | 15 |
kidney cell | 4.04e-19 | 17 |
kidney epithelial cell | 4.04e-19 | 17 |
epithelial cell | 8.28e-12 | 253 |
mesangial cell | 3.58e-11 | 2 |
kidney interstitial cell | 3.58e-11 | 2 |
juxtaglomerular complex cell | 3.58e-11 | 2 |
renal interstitial pericyte | 3.58e-11 | 2 |
extraglomerular mesangial cell | 3.58e-11 | 2 |
kidney cortical cell | 6.04e-11 | 12 |
renal cortical epithelial cell | 6.04e-11 | 12 |
hepatocyte | 7.47e-11 | 12 |
epithelial cell of uterus | 1.21e-08 | 6 |
stromal cell of endometrium | 1.21e-08 | 6 |
brush border epithelial cell | 3.43e-08 | 3 |
kidney cortex tubule cell | 3.43e-08 | 3 |
epithelial cell of proximal tubule | 3.43e-08 | 3 |
endodermal cell | 2.24e-07 | 58 |
serous secreting cell | 4.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 7.15e-20 | 25 |
clear cell adenocarcinoma | 8.98e-12 | 2 |
female reproductive organ cancer | 1.84e-11 | 27 |
reproductive organ cancer | 1.38e-10 | 29 |
disease of anatomical entity | 1.42e-09 | 39 |
carcinoma | 1.61e-09 | 106 |
cell type cancer | 1.87e-09 | 143 |
female reproductive endometrioid cancer | 1.21e-08 | 6 |
ovary epithelial cancer | 4.33e-07 | 1 |
cancer | 5.16e-07 | 235 |
disease of cellular proliferation | 9.06e-07 | 239 |