FFCP PHASE1:Hg19::chr3:98700059..98700099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_ENST00000473756_5end | |association_with_transcript=157bp_to_ENST00000473756_5end | ||
|cluster_id=chr3:98700059..98700099,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_5_at_ENST00000473756_5end | |description=CAGE_peak_5_at_ENST00000473756_5end | ||
|id=chr3:98700059..98700099,+ | |id=chr3:98700059..98700099,+ | ||
|ontology_enrichment_celltype=CL:0000183!2.20e-14!59;CL:0000680!2.46e-14!57;CL:0000056!2.46e-14!57;CL:0000355!2.46e-14!57;CL:0000548!5.72e-14!679;CL:0000004!5.72e-14!679;CL:0000255!5.72e-14!679;CL:0000012!1.18e-13!682;CL:0000187!2.05e-13!54;CL:0000359!7.01e-13!32;CL:0000192!1.12e-12!42;CL:0000514!1.12e-12!42;CL:0000220!6.20e-12!246;CL:0000393!7.17e-12!60;CL:0000211!7.17e-12!60;CL:1000497!7.21e-12!18;CL:0002518!7.21e-12!18;CL:0002321!1.23e-11!248;CL:1000507!9.06e-11!12;CL:1000494!9.06e-11!12;CL:0002371!1.72e-10!591;CL:1000449!2.05e-10!16;CL:0000144!6.69e-10!625;CL:0000003!9.62e-10!722;CL:0000055!1.69e-09!180;CL:0000222!6.52e-09!119;CL:0002539!5.65e-08!10;CL:0000066!5.91e-08!254;CL:0002681!1.24e-07!13;CL:0002584!1.24e-07!13 | |ontology_enrichment_celltype=CL:0000183!2.20e-14!59;CL:0000680!2.46e-14!57;CL:0000056!2.46e-14!57;CL:0000355!2.46e-14!57;CL:0000548!5.72e-14!679;CL:0000004!5.72e-14!679;CL:0000255!5.72e-14!679;CL:0000012!1.18e-13!682;CL:0000187!2.05e-13!54;CL:0000359!7.01e-13!32;CL:0000192!1.12e-12!42;CL:0000514!1.12e-12!42;CL:0000220!6.20e-12!246;CL:0000393!7.17e-12!60;CL:0000211!7.17e-12!60;CL:1000497!7.21e-12!18;CL:0002518!7.21e-12!18;CL:0002321!1.23e-11!248;CL:1000507!9.06e-11!12;CL:1000494!9.06e-11!12;CL:0002371!1.72e-10!591;CL:1000449!2.05e-10!16;CL:0000144!6.69e-10!625;CL:0000003!9.62e-10!722;CL:0000055!1.69e-09!180;CL:0000222!6.52e-09!119;CL:0002539!5.65e-08!10;CL:0000066!5.91e-08!254;CL:0002681!1.24e-07!13;CL:0002584!1.24e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;6.58e-21;10!CL:1000494;6.58e-21;10!CL:1000497;7.63e-19;17!CL:0002518;7.63e-19;17!CL:1000449;1.01e-18;15!CL:0002681;2.13e-13;12!CL:0002584;2.13e-13;12!CL:0000306;4.67e-09;4!CL:0002222;4.67e-09;4!CL:0002224;4.67e-09;4!CL:0000359;5.81e-09;32!CL:0000064;5.89e-08;3!CL:0000067;5.89e-08;3!CL:0005012;5.89e-08;3!CL:0002304;5.89e-08;3!CL:0000075;8.56e-08;27!CL:0000097;2.54e-07;5!CL:0000239;3.32e-07;3!CL:1000615;3.32e-07;3!CL:0002306;3.32e-07;3!CL:0002539;6.26e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.67e-21,10;CL:1000494,4.67e-21,10;CL:1000497,6.15e-19,17;CL:0002518,6.15e-19,17;CL:1000449,6.54e-19,15;CL:0002681,1.60e-13,12;CL:0002584,1.60e-13,12;CL:0000066,4.02e-10,253;CL:0000359,3.39e-09,32;CL:0000306,6.04e-09,4;CL:0002222,6.04e-09,4;CL:0002224,6.04e-09,4;CL:0000064,5.91e-08,3;CL:0000067,5.91e-08,3;CL:0005012,5.91e-08,3;CL:0002304,5.91e-08,3;CL:0000075,8.96e-08,27;CL:0000097,1.59e-07,5;CL:0002028,1.59e-07,5;CL:0000239,2.90e-07,3;CL:1000615,2.90e-07,3;CL:0002306,2.90e-07,3;CL:0000192,3.98e-07,43;CL:0000514,3.98e-07,43;CL:0002539,5.54e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.59e-07;10 | |||
|ontology_enrichment_disease=DOID:120!1.92e-09!27;DOID:193!2.08e-09!29;DOID:2394!2.50e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060072;1.32e-09;4!DOID:120;1.63e-09;27!DOID:193;1.17e-08;29!DOID:0060084;1.08e-07;3!DOID:127;1.08e-07;3!DOID:2394;1.22e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.36e-09,27;DOID:0060072,1.67e-09,4;DOID:193,9.94e-09,29;DOID:2394,1.11e-07,14;DOID:0060084,1.27e-07,3;DOID:127,1.27e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005256!3.72e-15!143;UBERON:0000486!4.30e-14!82;UBERON:0001134!1.25e-12!61;UBERON:0002036!1.25e-12!61;UBERON:0003082!1.25e-12!61;UBERON:0002385!7.25e-12!63;UBERON:0001015!7.25e-12!63;UBERON:0000383!7.25e-12!63;UBERON:0003914!2.87e-11!118;UBERON:0004290!5.14e-11!70;UBERON:0009773!9.06e-11!12;UBERON:0001231!9.06e-11!12;UBERON:0004810!9.06e-11!12;UBERON:0000119!1.25e-10!312;UBERON:0004211!2.05e-10!16;UBERON:0001285!2.05e-10!16;UBERON:0007684!2.05e-10!16;UBERON:0003220!2.05e-10!16;UBERON:0004208!2.05e-10!16;UBERON:0000483!3.12e-10!309;UBERON:0004573!7.72e-10!33;UBERON:0004571!7.72e-10!33;UBERON:0001637!8.11e-10!42;UBERON:0003509!8.11e-10!42;UBERON:0004572!8.11e-10!42;UBERON:0000914!8.60e-10!83;UBERON:0002329!8.60e-10!83;UBERON:0003077!8.60e-10!83;UBERON:0003059!8.60e-10!83;UBERON:0007282!8.60e-10!83;UBERON:0009618!8.60e-10!83;UBERON:0007285!8.60e-10!83;UBERON:0006555!1.51e-09!17;UBERON:0005103!1.51e-09!17;UBERON:0000083!1.51e-09!17;UBERON:0009201!1.51e-09!17;UBERON:0004819!1.51e-09!17;UBERON:0006553!1.51e-09!17;UBERON:0003074!1.51e-09!17;UBERON:0003060!1.51e-09!17;UBERON:0006554!1.89e-09!44;UBERON:0007625!1.97e-09!11;UBERON:0001008!4.58e-09!45;UBERON:0000490!5.63e-09!138;UBERON:0000058!6.52e-09!26;UBERON:0000080!8.87e-09!18;UBERON:0002120!8.87e-09!18;UBERON:0004875!8.87e-09!18;UBERON:0005721!8.87e-09!18;UBERON:0005754!8.87e-09!18;UBERON:0007297!8.87e-09!18;UBERON:0002100!5.61e-08!216;UBERON:0004237!5.65e-08!10;UBERON:0004695!5.65e-08!10;UBERON:0002111!5.65e-08!10;UBERON:0004178!5.65e-08!10;UBERON:0003887!7.93e-08!21;UBERON:0001225!1.24e-07!13;UBERON:0008987!1.24e-07!13;UBERON:0004876!1.73e-07!20;UBERON:0003064!3.41e-07!37;UBERON:0003100!4.93e-07!41;UBERON:0000076!8.51e-07!8;UBERON:0002049!8.60e-07!79;UBERON:0007798!8.60e-07!79 | |||
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| ||
|short_description=p5@ENST00000473756 | |short_description=p5@ENST00000473756 | ||
}} | }} |
Latest revision as of 00:10, 30 July 2015
Short description: | p5@ENST00000473756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000473756_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 157bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.67e-21 | 10 |
nephron tubule epithelial cell | 4.67e-21 | 10 |
kidney cell | 6.15e-19 | 17 |
kidney epithelial cell | 6.15e-19 | 17 |
epithelial cell of nephron | 6.54e-19 | 15 |
kidney cortical cell | 1.60e-13 | 12 |
renal cortical epithelial cell | 1.60e-13 | 12 |
epithelial cell | 4.02e-10 | 253 |
vascular associated smooth muscle cell | 3.39e-09 | 32 |
crystallin accumulating cell | 6.04e-09 | 4 |
vertebrate lens cell | 6.04e-09 | 4 |
lens epithelial cell | 6.04e-09 | 4 |
ciliated cell | 5.91e-08 | 3 |
ciliated epithelial cell | 5.91e-08 | 3 |
multi-ciliated epithelial cell | 5.91e-08 | 3 |
non-pigmented ciliary epithelial cell | 5.91e-08 | 3 |
columnar/cuboidal epithelial cell | 8.96e-08 | 27 |
mast cell | 1.59e-07 | 5 |
basophil mast progenitor cell | 1.59e-07 | 5 |
brush border epithelial cell | 2.90e-07 | 3 |
kidney cortex tubule cell | 2.90e-07 | 3 |
epithelial cell of proximal tubule | 2.90e-07 | 3 |
smooth muscle cell | 3.98e-07 | 43 |
smooth muscle myoblast | 3.98e-07 | 43 |
aortic smooth muscle cell | 5.54e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.36e-09 | 27 |
benign neoplasm | 1.67e-09 | 4 |
reproductive organ cancer | 9.94e-09 | 29 |
ovarian cancer | 1.11e-07 | 14 |
cell type benign neoplasm | 1.27e-07 | 3 |
leiomyoma | 1.27e-07 | 3 |