FFCP PHASE1:Hg19::chr19:10736129..10736140,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57153 | |EntrezGene=57153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17292 | |HGNC=17292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWA5 | |UniProt=Q8IWA5 | ||
|association_with_transcript=-30bp_to_ENST00000335757,NM_020428,uc002mpf.2_5end | |association_with_transcript=-30bp_to_ENST00000335757,NM_020428,uc002mpf.2_5end | ||
|cluster_id=chr19:10736129..10736140,+ | |||
|description=CAGE_peak_5_at_SLC44A2_5end | |description=CAGE_peak_5_at_SLC44A2_5end | ||
|id=chr19:10736129..10736140,+ | |id=chr19:10736129..10736140,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.31e-23!254;CL:0002321!3.13e-12!248;CL:0000220!1.38e-11!246;CL:0000077!1.52e-08!19;CL:1000449!5.80e-08!16;CL:1000497!1.08e-07!18;CL:0002518!1.08e-07!18;CL:1000507!1.90e-07!12;CL:1000494!1.90e-07!12 | |ontology_enrichment_celltype=CL:0000066!4.31e-23!254;CL:0002321!3.13e-12!248;CL:0000220!1.38e-11!246;CL:0000077!1.52e-08!19;CL:1000449!5.80e-08!16;CL:1000497!1.08e-07!18;CL:0002518!1.08e-07!18;CL:1000507!1.90e-07!12;CL:1000494!1.90e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.83e-19;10!CL:1000494;2.83e-19;10!CL:1000497;2.19e-17;17!CL:0002518;2.19e-17;17!CL:1000449;2.35e-17;15!CL:0002681;9.78e-13;12!CL:0002584;9.78e-13;12!CL:0002322;1.77e-08;5!CL:0000077;2.04e-08;19!CL:0000239;2.30e-07;3!CL:1000615;2.30e-07;3!CL:0002306;2.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.24e-19,10;CL:1000494,6.24e-19,10;CL:1000497,3.75e-17,17;CL:0002518,3.75e-17,17;CL:1000449,6.03e-17,15;CL:0000066,6.76e-14,253;CL:0002681,2.11e-12,12;CL:0002584,2.11e-12,12;CL:0000077,2.52e-08,19;CL:0002322,4.25e-08,5;CL:0000239,2.45e-07,3;CL:1000615,2.45e-07,3;CL:0002306,2.45e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.91e-09!143;DOID:305!4.38e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.72e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000481!5.91e-11!347;UBERON:0003104!2.08e-10!238;UBERON:0009142!2.08e-10!238;UBERON:0000475!1.14e-09!365;UBERON:0005177!1.88e-09!107;UBERON:0002100!3.55e-09!216;UBERON:0000468!5.57e-09!659;UBERON:0004119!1.89e-08!169;UBERON:0000925!1.89e-08!169;UBERON:0006595!1.89e-08!169;UBERON:0000064!2.15e-08!219;UBERON:0004211!5.80e-08!16;UBERON:0001285!5.80e-08!16;UBERON:0007684!5.80e-08!16;UBERON:0003220!5.80e-08!16;UBERON:0004208!5.80e-08!16;UBERON:0005172!7.48e-08!55;UBERON:0005173!7.48e-08!55;UBERON:0009569!8.10e-08!113;UBERON:0000467!9.03e-08!625;UBERON:0006555!9.15e-08!17;UBERON:0005103!9.15e-08!17;UBERON:0000083!9.15e-08!17;UBERON:0009201!9.15e-08!17;UBERON:0004819!9.15e-08!17;UBERON:0006553!9.15e-08!17;UBERON:0003074!9.15e-08!17;UBERON:0003060!9.15e-08!17;UBERON:0000480!1.24e-07!626;UBERON:0001851!1.39e-07!16;UBERON:0002113!1.42e-07!27;UBERON:0003918!1.42e-07!27;UBERON:0005095!1.42e-07!27;UBERON:0007687!1.42e-07!27;UBERON:0006554!1.72e-07!44;UBERON:0009773!1.90e-07!12;UBERON:0001231!1.90e-07!12;UBERON:0004810!1.90e-07!12;UBERON:0001737!2.01e-07!9;UBERON:0000922!2.16e-07!612;UBERON:0000489!2.69e-07!32;UBERON:0002417!3.14e-07!61;UBERON:0000916!3.14e-07!61;UBERON:0000483!3.57e-07!309;UBERON:0000119!3.72e-07!312;UBERON:0001008!4.59e-07!45;UBERON:0000080!5.84e-07!18;UBERON:0002120!5.84e-07!18;UBERON:0004875!5.84e-07!18;UBERON:0005721!5.84e-07!18;UBERON:0005754!5.84e-07!18;UBERON:0007297!5.84e-07!18;UBERON:0000466!8.02e-07!126 | |ontology_enrichment_uberon=UBERON:0000481!5.91e-11!347;UBERON:0003104!2.08e-10!238;UBERON:0009142!2.08e-10!238;UBERON:0000475!1.14e-09!365;UBERON:0005177!1.88e-09!107;UBERON:0002100!3.55e-09!216;UBERON:0000468!5.57e-09!659;UBERON:0004119!1.89e-08!169;UBERON:0000925!1.89e-08!169;UBERON:0006595!1.89e-08!169;UBERON:0000064!2.15e-08!219;UBERON:0004211!5.80e-08!16;UBERON:0001285!5.80e-08!16;UBERON:0007684!5.80e-08!16;UBERON:0003220!5.80e-08!16;UBERON:0004208!5.80e-08!16;UBERON:0005172!7.48e-08!55;UBERON:0005173!7.48e-08!55;UBERON:0009569!8.10e-08!113;UBERON:0000467!9.03e-08!625;UBERON:0006555!9.15e-08!17;UBERON:0005103!9.15e-08!17;UBERON:0000083!9.15e-08!17;UBERON:0009201!9.15e-08!17;UBERON:0004819!9.15e-08!17;UBERON:0006553!9.15e-08!17;UBERON:0003074!9.15e-08!17;UBERON:0003060!9.15e-08!17;UBERON:0000480!1.24e-07!626;UBERON:0001851!1.39e-07!16;UBERON:0002113!1.42e-07!27;UBERON:0003918!1.42e-07!27;UBERON:0005095!1.42e-07!27;UBERON:0007687!1.42e-07!27;UBERON:0006554!1.72e-07!44;UBERON:0009773!1.90e-07!12;UBERON:0001231!1.90e-07!12;UBERON:0004810!1.90e-07!12;UBERON:0001737!2.01e-07!9;UBERON:0000922!2.16e-07!612;UBERON:0000489!2.69e-07!32;UBERON:0002417!3.14e-07!61;UBERON:0000916!3.14e-07!61;UBERON:0000483!3.57e-07!309;UBERON:0000119!3.72e-07!312;UBERON:0001008!4.59e-07!45;UBERON:0000080!5.84e-07!18;UBERON:0002120!5.84e-07!18;UBERON:0004875!5.84e-07!18;UBERON:0005721!5.84e-07!18;UBERON:0005754!5.84e-07!18;UBERON:0007297!5.84e-07!18;UBERON:0000466!8.02e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.83e-19;10!UBERON:0009773;2.83e-19;10!UBERON:0001231;2.83e-19;10!UBERON:0004810;2.83e-19;10!UBERON:0002113;1.29e-17;24!UBERON:0011143;1.29e-17;24!UBERON:0006555;2.35e-17;15!UBERON:0004819;2.35e-17;15!UBERON:0001285;2.35e-17;15!UBERON:0007684;2.35e-17;15!UBERON:0001737;9.11e-16;9!UBERON:0001557;9.11e-16;9!UBERON:0000489;1.42e-15;29!UBERON:0001851;6.55e-15;15!UBERON:0006554;6.87e-15;30!UBERON:0001008;6.87e-15;30!UBERON:0001225;9.78e-13;12!UBERON:0008987;9.78e-13;12!UBERON:0000353;4.23e-12;15!UBERON:0005172;1.78e-09;52!UBERON:0005173;1.78e-09;52!UBERON:0006853;2.30e-07;3!UBERON:0007685;2.30e-07;3!UBERON:0004134;2.30e-07;3 | |||
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|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,6.97801167972428,1.31064823278103,1.84636884759917,0,0.662794751455832,0,0,0,0,0.738726348460727,0.408001382488506,0,1.14494394852423,1.64249310087461,0.502170558379211,0,0,0,0,0,0,0,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.443458794925128,0.175669571386252,0.654895377488563,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0.44905874525234,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0.673344455816265,0.250237039743928,1.6623846929051,0,0,0,0.680593098960126,0,0.213557388818567,0,0.600182192168805,0.103052529238439,0,0,0,0.389748020644795,0.252433774244115,0.276149695926898,0,1.06502877754984,0.906768884048762,0.508681776931463,2.12586938479627,0.818238361772504,1.72082757233402,1.09776335516636,1.85541675650079,1.2781333715647,1.0366105501537,1.26160425437814,1.82488679537915,0,0,1.38134921352481,0,0.721879481669586,1.65629520055781,2.86593973132773,1.20505514941741,2.42646740011267,2.17879444092406,1.42362371466658,1.8876383142423,2.5508790466295,2.30848294167834,0,2.80483547606892,1.6462960453256,4.41026134156626,0,0,0,0,0.368965315629341,0.343135620597051,0.439001141634502,4.49607013030478,0.502644862058154,0.277765335475589,0,2.07986957055916,0,0.927443239800615,0.117408694235822,0.433099343283221,0,0.380508304469197,0.790204397959275,0,0,0,0,1.87467667973554,2.01578553838631,0.992425680696705,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0.646358578788889,0,0,0,0,0.514414748524284,1.41849132023278,0.799266537048298,0.285955987316295,0,1.64648067356154,0,0,0,0.904318131178758,0.871533458600294,0.799783929456456,0,0,0,0.239624855491583,0,2.85273810081437,0.434343920002738,0.821905290201534,0.716243852959582,0,0,0,0,1.01637849688985,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0.713715955188647,1.26161932027148,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0.587403472388222,0,0,0,0,1.5156378572313,1.66435439510497,0.604780586659361,0.744323423456331,0,0.841980283299221,0.384417447767103,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0,0,0,0.120859449591622,0,0.276242966807689,0.574072240823034,0,0,8.12159303233341,6.2382423054576,2.35304930753057,2.92278449306521,1.16106791782163,1.13733384070897,0.510281115829547,0.647747748306418,0,1.08378575017541,3.51182841698397,9.94017464875649,10.8039881160734,2.23874754722178,0,0,0.769350375349168,1.96808787419823,0.325378394664303,0.515205058238611,0.732555718546747,0.907604499126468,0.574265537996172,0.650060246036521,0,0.676695028044854,0,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.356128142586949,0.165284915360978,0.576570202095319,0.638063562472921,0.6069466851333,0,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0,0.55597265731176,0.429374660225974,1.116475108079,0.949138274156178,1.14378116354295,0.767693373934002,0,0.636406495851874,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.409499734223957,0.141405431953713,0,1.10273068709225,0.66343897524122,0,0,0,0.608731130888112,0,0.563391205064483,1.57752487424457,0.88424136911809,0.35667105148125,0.354761064070598,0,0,0,0.349934720244983,0.384888450902048,0.670302275535787,0,0.188287601553558,1.72202149068492,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,1.67121139316383,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,2.53350489753592,0.19924798825107,0.276283915531148,0,0.613612095012929,0,0.311039587661807,0.539210106883961,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0.945550727071745,0,0,0.520874984799877,0,0,0,0.110579259931225,0,0,1.41620002574687,0.697118721393016,0,0.113942055847001,1.1528195219403,0.538545866458633,0.760531603454056,1.27600463892768,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0,0,0.176915129006678,0,0,0,0,0.404406797884062,0,0,0,0.19566461893209,0.728341138602278,0,0,0.61214552326098,0.126373159256976,2.55549813004637,1.86638744515045,0.664653872707185,0,0.313932918407225,0,0,0,0.347119476670262,0,0.609414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| ||
|short_description=p5@SLC44A2 | |short_description=p5@SLC44A2 | ||
}} | }} |
Latest revision as of 02:23, 25 September 2015
Short description: | p5@SLC44A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC44A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000335757, NM_020428, uc002mpf.2_5end |
EntrezGene: | SLC44A2 |
HGNC: | 17292 |
UniProt: | Q8IWA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.24e-19 | 10 |
nephron tubule epithelial cell | 6.24e-19 | 10 |
kidney cell | 3.75e-17 | 17 |
kidney epithelial cell | 3.75e-17 | 17 |
epithelial cell of nephron | 6.03e-17 | 15 |
epithelial cell | 6.76e-14 | 253 |
kidney cortical cell | 2.11e-12 | 12 |
renal cortical epithelial cell | 2.11e-12 | 12 |
mesothelial cell | 2.52e-08 | 19 |
embryonic stem cell | 4.25e-08 | 5 |
brush border epithelial cell | 2.45e-07 | 3 |
kidney cortex tubule cell | 2.45e-07 | 3 |
epithelial cell of proximal tubule | 2.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 6.24e-19 | 10 |
nephron epithelium | 6.03e-17 | 15 |
renal tubule | 6.03e-17 | 15 |
nephron tubule | 6.03e-17 | 15 |
nephron | 6.03e-17 | 15 |
uriniferous tubule | 6.03e-17 | 15 |
nephrogenic mesenchyme | 6.03e-17 | 15 |
larynx | 3.89e-16 | 9 |
kidney | 6.99e-16 | 26 |
kidney mesenchyme | 6.99e-16 | 26 |
upper urinary tract | 6.99e-16 | 26 |
kidney rudiment | 6.99e-16 | 26 |
kidney field | 6.99e-16 | 26 |
excretory tube | 1.12e-15 | 16 |
kidney epithelium | 1.12e-15 | 16 |
cortex | 1.29e-14 | 15 |
cavitated compound organ | 2.50e-14 | 31 |
urinary system structure | 5.40e-14 | 47 |
renal system | 1.43e-13 | 48 |
abdomen element | 3.90e-13 | 54 |
abdominal segment element | 3.90e-13 | 54 |
cortex of kidney | 2.11e-12 | 12 |
renal parenchyma | 2.11e-12 | 12 |
parenchyma | 7.49e-12 | 15 |
abdominal segment of trunk | 3.63e-11 | 60 |
abdomen | 3.63e-11 | 60 |
renal cortex tubule | 2.45e-07 | 3 |
region of nephron tubule | 2.45e-07 | 3 |
proximal tubule | 2.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.72e-08 | 143 |