FFCP PHASE1:Hg19::chr22:33454330..33454348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8224 | |EntrezGene=8224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11496 | |HGNC=11496 | ||
|TSSclassifier=strong | |||
|UniProt=O14994 | |UniProt=O14994 | ||
|association_with_transcript=9bp_to_ENST00000358763_5end | |association_with_transcript=9bp_to_ENST00000358763_5end | ||
|cluster_id=chr22:33454330..33454348,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_SYN3_5end | |description=CAGE_peak_2_at_SYN3_5end | ||
|id=chr22:33454330..33454348,- | |id=chr22:33454330..33454348,- | ||
|ontology_enrichment_celltype=CL:0000236!1.14e-11!14;CL:0002322!1.52e-08!5 | |ontology_enrichment_celltype=CL:0000236!1.14e-11!14;CL:0002322!1.52e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.57e-17;13!CL:0002322;4.81e-11;5!CL:0000945;3.51e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.83e-16,14;CL:0002322,4.06e-11,5;CL:0000945,3.23e-08,24;CL:0000826,3.23e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.84e-14;82!UBERON:0006215;3.83e-07;3!UBERON:0006241;9.30e-07;3!UBERON:0003057;9.30e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.74e-59!57;UBERON:0005068!9.74e-59!57;UBERON:0006241!9.74e-59!57;UBERON:0007135!9.74e-59!57;UBERON:0001017!9.69e-55!82;UBERON:0005743!3.16e-53!86;UBERON:0002616!7.47e-49!59;UBERON:0000073!3.34e-48!94;UBERON:0001016!3.34e-48!94;UBERON:0002780!6.46e-48!41;UBERON:0001890!6.46e-48!41;UBERON:0006240!6.46e-48!41;UBERON:0000955!1.78e-47!69;UBERON:0006238!1.78e-47!69;UBERON:0007023!6.54e-47!115;UBERON:0003080!1.74e-46!42;UBERON:0003075!1.06e-41!86;UBERON:0007284!1.06e-41!86;UBERON:0002346!4.60e-39!90;UBERON:0001869!1.00e-38!32;UBERON:0002020!1.59e-38!34;UBERON:0003528!1.59e-38!34;UBERON:0001893!3.34e-38!34;UBERON:0002791!9.53e-37!33;UBERON:0002619!6.81e-34!22;UBERON:0003056!1.62e-31!61;UBERON:0001950!4.30e-31!20;UBERON:0000956!4.74e-29!25;UBERON:0000203!4.74e-29!25;UBERON:0000033!3.31e-26!123;UBERON:0000153!3.39e-25!129;UBERON:0007811!3.39e-25!129;UBERON:0004121!4.87e-25!169;UBERON:0000924!5.31e-24!173;UBERON:0006601!5.31e-24!173;UBERON:0003076!4.85e-13!15;UBERON:0003057!4.85e-13!15;UBERON:0000025!3.27e-11!194;UBERON:0002420!3.55e-11!9;UBERON:0007245!3.55e-11!9;UBERON:0010009!3.55e-11!9;UBERON:0010011!3.55e-11!9;UBERON:0000454!3.55e-11!9;UBERON:0001894!4.67e-11!7;UBERON:0006222!4.67e-11!7;UBERON:0000200!7.19e-11!6;UBERON:0001871!7.53e-11!7;UBERON:0002308!8.48e-11!9;UBERON:0000125!8.48e-11!9;UBERON:0002021!1.29e-09!5;UBERON:0004733!1.52e-09!12;UBERON:0002028!1.52e-09!12;UBERON:0007277!1.52e-09!12;UBERON:0001872!1.97e-09!5;UBERON:0000349!6.43e-09!5;UBERON:0004111!7.03e-09!241;UBERON:0004732!1.20e-08!13;UBERON:0009663!3.41e-08!7;UBERON:0003296!2.07e-07!4;UBERON:0010133!2.07e-07!4;UBERON:0000369!2.14e-07!4;UBERON:0002435!2.14e-07!4;UBERON:0000204!2.14e-07!4;UBERON:0010082!2.14e-07!4;UBERON:0002298!7.36e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.00e-47;32!UBERON:0002619;4.14e-46;22!UBERON:0003528;1.28e-45;34!UBERON:0002020;1.28e-45;34!UBERON:0002780;1.60e-44;41!UBERON:0001890;1.60e-44;41!UBERON:0002791;2.12e-44;32!UBERON:0001893;6.93e-43;34!UBERON:0001950;3.05e-42;20!UBERON:0000073;2.76e-41;53!UBERON:0002616;2.76e-41;53!UBERON:0000956;5.84e-40;25!UBERON:0000203;5.84e-40;25!UBERON:0000955;4.40e-30;68!UBERON:0001017;2.38e-28;75!UBERON:0001016;1.66e-22;83!UBERON:0002420;6.90e-15;9!UBERON:0007245;6.90e-15;9!UBERON:0010009;6.90e-15;9!UBERON:0010011;6.90e-15;9!UBERON:0000454;6.90e-15;9!UBERON:0001894;1.79e-14;7!UBERON:0000125;2.36e-14;9!UBERON:0002308;2.36e-14;9!UBERON:0000200;2.77e-14;6!UBERON:0004733;6.50e-13;12!UBERON:0002028;6.50e-13;12!UBERON:0002021;1.41e-12;5!UBERON:0002298;2.23e-12;6!UBERON:0001872;2.23e-12;5!UBERON:0001871;2.45e-12;6!UBERON:0004732;8.91e-12;13!UBERON:0000349;1.21e-11;5!UBERON:0009663;8.07e-11;7!UBERON:0007023;1.36e-10;114!UBERON:0000369;1.41e-09;4!UBERON:0002435;1.41e-09;4!UBERON:0000204;1.41e-09;4!UBERON:0003296;1.53e-09;4!UBERON:0010133;1.53e-09;4!UBERON:0002784;2.03e-09;4!UBERON:0011216;4.26e-09;132!UBERON:0002680;3.29e-08;9!UBERON:0001895;3.29e-08;9!UBERON:0001870;6.38e-08;3!UBERON:0005383;1.36e-07;3!UBERON:0005382;1.36e-07;3!UBERON:0000988;3.16e-07;3!UBERON:0001896;8.38e-07;3!UBERON:0005290;8.38e-07;3!UBERON:0002240;9.30e-07;3!UBERON:0005174;9.30e-07;3!UBERON:0001137;9.30e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.87e-80,56;UBERON:0005068,2.87e-80,56;UBERON:0006241,2.87e-80,56;UBERON:0007135,2.87e-80,56;UBERON:0000073,7.57e-75,53;UBERON:0002616,7.57e-75,53;UBERON:0001017,2.71e-69,81;UBERON:0000955,1.29e-63,68;UBERON:0006238,1.29e-63,68;UBERON:0001016,2.68e-63,89;UBERON:0002780,5.76e-63,41;UBERON:0001890,5.76e-63,41;UBERON:0003080,5.76e-63,41;UBERON:0006240,5.76e-63,41;UBERON:0001869,2.85e-53,32;UBERON:0003528,3.75e-53,34;UBERON:0002020,3.75e-53,34;UBERON:0003075,1.56e-50,82;UBERON:0007284,1.56e-50,82;UBERON:0001893,1.10e-49,34;UBERON:0002791,2.02e-49,32;UBERON:0002346,1.52e-47,86;UBERON:0002619,4.25e-46,22;UBERON:0001950,3.00e-42,20;UBERON:0000956,5.98e-40,25;UBERON:0000203,5.98e-40,25;UBERON:0003056,5.89e-39,61;UBERON:0010371,7.87e-39,104;UBERON:0007023,5.15e-34,114;UBERON:0010314,4.75e-29,132;UBERON:0004121,3.60e-27,171;UBERON:0000924,3.60e-27,171;UBERON:0006601,3.60e-27,171;UBERON:0011216,7.14e-25,223;UBERON:0000025,4.43e-19,192;UBERON:0003076,1.01e-17,15;UBERON:0003057,1.01e-17,15;UBERON:0002420,6.78e-15,9;UBERON:0007245,6.78e-15,9;UBERON:0010009,6.78e-15,9;UBERON:0010011,6.78e-15,9;UBERON:0000454,6.78e-15,9;UBERON:0001894,1.48e-14,7;UBERON:0006222,1.48e-14,7;UBERON:0000125,2.25e-14,9;UBERON:0002308,2.25e-14,9;UBERON:0000200,2.68e-14,6;UBERON:0004733,6.61e-13,12;UBERON:0002028,6.61e-13,12;UBERON:0007277,6.61e-13,12;UBERON:0002021,1.39e-12,5;UBERON:0004111,1.83e-12,240;UBERON:0002298,2.14e-12,6;UBERON:0001871,2.36e-12,6;UBERON:0001872,2.47e-12,5;UBERON:0004732,9.04e-12,13;UBERON:0000349,1.25e-11,5;UBERON:0009663,8.30e-11,7;UBERON:0003296,1.43e-09,4;UBERON:0010133,1.43e-09,4;UBERON:0000369,1.50e-09,4;UBERON:0002435,1.50e-09,4;UBERON:0000204,1.50e-09,4;UBERON:0010082,1.50e-09,4;UBERON:0002784,1.91e-09,4;UBERON:0002680,3.21e-08,9;UBERON:0001895,3.21e-08,9;UBERON:0010092,3.21e-08,9;UBERON:0001870,5.69e-08,3;UBERON:0005383,1.37e-07,3;UBERON:0005382,1.37e-07,3;UBERON:0000483,1.59e-07,306;UBERON:0000119,2.49e-07,309;UBERON:0000988,2.83e-07,3;UBERON:0001896,8.92e-07,3;UBERON:0005290,8.92e-07,3;UBERON:0010096,8.92e-07,3 | |||
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|short_description=p2@SYN3 | |short_description=p2@SYN3 | ||
}} | }} |
Latest revision as of 23:03, 19 September 2015
Short description: | p2@SYN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYN3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 9bp_to_ENST00000358763_5end |
EntrezGene: | SYN3 |
HGNC: | 11496 |
UniProt: | O14994 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.83e-16 | 14 |
embryonic stem cell | 4.06e-11 | 5 |
lymphocyte of B lineage | 3.23e-08 | 24 |
pro-B cell | 3.23e-08 | 24 |