FFCP PHASE1:Hg19::chr22:30653699..30653718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:30653699..30653718,- | |||
|coexpression_cluster_id=C1262 | |||
|description=CAGE_peak_at_chr22:30653699..30653718,- | |description=CAGE_peak_at_chr22:30653699..30653718,- | ||
|id=chr22:30653699..30653718,- | |id=chr22:30653699..30653718,- | ||
|ontology_enrichment_celltype=CL:0000066!8.82e-19!254;CL:1000497!4.47e-14!18;CL:0002518!4.47e-14!18;CL:1000449!1.30e-11!16;CL:1000507!1.75e-11!12;CL:1000494!1.75e-11!12;CL:0002681!5.66e-08!13;CL:0002584!5.66e-08!13;CL:0002274!1.42e-07!5;CL:0000457!1.42e-07!5;CL:0002191!1.42e-07!5;CL:0000097!1.42e-07!5;CL:0000831!1.42e-07!5;CL:0002028!1.42e-07!5 | |ontology_enrichment_celltype=CL:0000066!8.82e-19!254;CL:1000497!4.47e-14!18;CL:0002518!4.47e-14!18;CL:1000449!1.30e-11!16;CL:1000507!1.75e-11!12;CL:1000494!1.75e-11!12;CL:0002681!5.66e-08!13;CL:0002584!5.66e-08!13;CL:0002274!1.42e-07!5;CL:0000457!1.42e-07!5;CL:0002191!1.42e-07!5;CL:0000097!1.42e-07!5;CL:0000831!1.42e-07!5;CL:0002028!1.42e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.50e-27;17!CL:0002518;2.50e-27;17!CL:1000507;2.02e-23;10!CL:1000494;2.02e-23;10!CL:1000449;3.84e-22;15!CL:0002681;1.63e-14;12!CL:0002584;1.63e-14;12!CL:0002149;1.72e-12;6!CL:0002255;1.72e-12;6!CL:0000097;1.45e-09;5!CL:0000239;2.32e-09;3!CL:1000615;2.32e-09;3!CL:0002306;2.32e-09;3!CL:0000163;8.92e-08;9!CL:0000159;5.91e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.63e-27,17;CL:0002518,2.63e-27,17;CL:1000507,2.23e-23,10;CL:1000494,2.23e-23,10;CL:1000449,3.95e-22,15;CL:0000066,1.76e-21,253;CL:0002681,1.70e-14,12;CL:0002584,1.70e-14,12;CL:0002149,1.74e-12,6;CL:0002255,1.74e-12,6;CL:0000097,1.45e-09,5;CL:0002028,1.45e-09,5;CL:0000239,2.10e-09,3;CL:1000615,2.10e-09,3;CL:0002306,2.10e-09,3;CL:0000163,9.35e-08,9;CL:0000159,4.07e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.40e-26!106;DOID:0050687!6.76e-24!143;DOID:162!2.64e-16!235;DOID:14566!1.73e-15!239;DOID:299!5.68e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:299;6.87e-15;25!DOID:3001;1.72e-12;6!DOID:3908;1.04e-09;5!DOID:4468;1.22e-07;2!DOID:120;1.28e-07;27!DOID:4929;3.09e-07;2!DOID:193;5.63e-07;29!DOID:3910;9.34e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.50e-23,106;DOID:0050687,1.58e-21,143;DOID:299,6.29e-15,25;DOID:162,4.18e-14,235;DOID:14566,1.39e-13,239;DOID:3001,1.74e-12,6;DOID:3908,1.03e-09,5;DOID:120,1.21e-07,27;DOID:4468,1.38e-07,2;DOID:4929,4.07e-07,2;DOID:193,5.35e-07,29;DOID:3910,7.62e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.41e-14!26;UBERON:0005177!3.28e-13!107;UBERON:0002113!6.81e-13!27;UBERON:0003918!6.81e-13!27;UBERON:0005095!6.81e-13!27;UBERON:0007687!6.81e-13!27;UBERON:0004211!1.30e-11!16;UBERON:0001285!1.30e-11!16;UBERON:0007684!1.30e-11!16;UBERON:0003220!1.30e-11!16;UBERON:0004208!1.30e-11!16;UBERON:0000489!1.68e-11!32;UBERON:0009773!1.75e-11!12;UBERON:0001231!1.75e-11!12;UBERON:0004810!1.75e-11!12;UBERON:0006555!1.03e-10!17;UBERON:0005103!1.03e-10!17;UBERON:0000083!1.03e-10!17;UBERON:0009201!1.03e-10!17;UBERON:0004819!1.03e-10!17;UBERON:0006553!1.03e-10!17;UBERON:0003074!1.03e-10!17;UBERON:0003060!1.03e-10!17;UBERON:0005172!1.78e-10!55;UBERON:0005173!1.78e-10!55;UBERON:0000466!2.35e-10!126;UBERON:0003886!2.74e-10!63;UBERON:0000080!6.47e-10!18;UBERON:0002120!6.47e-10!18;UBERON:0004875!6.47e-10!18;UBERON:0005721!6.47e-10!18;UBERON:0005754!6.47e-10!18;UBERON:0007297!6.47e-10!18;UBERON:0002294!3.43e-09!7;UBERON:0001173!3.43e-09!7;UBERON:0004912!3.43e-09!7;UBERON:0000464!5.27e-09!104;UBERON:0006554!6.49e-09!44;UBERON:0002417!1.06e-08!61;UBERON:0000916!1.06e-08!61;UBERON:0001008!1.40e-08!45;UBERON:0004876!1.43e-08!20;UBERON:0000062!1.77e-08!511;UBERON:0002553!1.90e-08!70;UBERON:0000353!3.86e-08!17;UBERON:0003887!5.33e-08!21;UBERON:0001225!5.66e-08!13;UBERON:0008987!5.66e-08!13;UBERON:0002108!6.65e-08!14;UBERON:0000926!6.88e-08!448;UBERON:0004120!6.88e-08!448;UBERON:0006603!6.88e-08!448;UBERON:0002075!1.15e-07!18;UBERON:0001851!1.63e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.02e-23;10!UBERON:0009773;2.02e-23;10!UBERON:0001231;2.02e-23;10!UBERON:0004810;2.02e-23;10!UBERON:0006555;3.84e-22;15!UBERON:0004819;3.84e-22;15!UBERON:0001285;3.84e-22;15!UBERON:0007684;3.84e-22;15!UBERON:0002113;2.08e-18;24!UBERON:0011143;2.08e-18;24!UBERON:0000489;3.18e-17;29!UBERON:0006554;1.56e-16;30!UBERON:0001008;1.56e-16;30!UBERON:0001225;1.63e-14;12!UBERON:0008987;1.63e-14;12!UBERON:0001851;3.59e-14;15!UBERON:0000353;3.59e-14;15!UBERON:0006853;2.32e-09;3!UBERON:0007685;2.32e-09;3!UBERON:0004134;2.32e-09;3!UBERON:0001264;1.21e-07;10!UBERON:0002075;1.39e-07;18!UBERON:0002394;1.83e-07;4!UBERON:0003928;1.83e-07;4!UBERON:0000058;2.88e-07;10!UBERON:0002294;3.09e-07;7!UBERON:0001173;3.09e-07;7!UBERON:0005172;7.26e-07;52!UBERON:0005173;7.26e-07;52!UBERON:0005177;8.12e-07;99!UBERON:0004903;9.34e-07;2!UBERON:0002173;9.34e-07;2!UBERON:0002186;9.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.23e-23,10;UBERON:0004211,3.95e-22,15;UBERON:0009773,3.95e-22,15;UBERON:0001231,3.95e-22,15;UBERON:0001285,3.95e-22,15;UBERON:0007684,3.95e-22,15;UBERON:0004208,3.95e-22,15;UBERON:0006555,1.38e-20,16;UBERON:0004819,1.38e-20,16;UBERON:0002113,9.87e-17,26;UBERON:0003918,9.87e-17,26;UBERON:0011143,9.87e-17,26;UBERON:0005095,9.87e-17,26;UBERON:0007687,9.87e-17,26;UBERON:0005177,6.62e-16,101;UBERON:0000489,6.87e-16,31;UBERON:0001225,1.70e-14,12;UBERON:0008987,1.70e-14,12;UBERON:0000353,3.79e-14,15;UBERON:0001851,3.91e-14,15;UBERON:0006554,1.83e-12,47;UBERON:0001008,4.02e-12,48;UBERON:0000058,5.65e-11,19;UBERON:0005172,3.24e-10,54;UBERON:0005173,3.24e-10,54;UBERON:0006853,2.10e-09,3;UBERON:0007685,2.10e-09,3;UBERON:0004134,2.10e-09,3;UBERON:0002417,8.10e-09,60;UBERON:0000916,8.10e-09,60;UBERON:0002294,2.96e-08,9;UBERON:0001173,2.96e-08,9;UBERON:0004912,2.96e-08,9;UBERON:0002394,3.29e-08,6;UBERON:0003928,3.29e-08,6;UBERON:0002100,5.95e-08,199;UBERON:0001264,1.31e-07,10;UBERON:0002075,1.42e-07,18;UBERON:0009569,2.88e-07,112;UBERON:0004903,7.62e-07,2;UBERON:0002173,7.62e-07,2;UBERON:0002186,7.62e-07,2 | |||
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|short_description=p@chr22:30653699..30653718,- | |short_description=p@chr22:30653699..30653718,- | ||
}} | }} |
Latest revision as of 20:05, 28 July 2015
Short description: | p@chr22:30653699..30653718, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:30653699..30653718, - |
Coexpression cluster: | C1262_renal_clear_Renal_papillotubular_embryonic_mucinous_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.63e-27 | 17 |
kidney epithelial cell | 2.63e-27 | 17 |
kidney tubule cell | 2.23e-23 | 10 |
nephron tubule epithelial cell | 2.23e-23 | 10 |
epithelial cell of nephron | 3.95e-22 | 15 |
epithelial cell | 1.76e-21 | 253 |
kidney cortical cell | 1.70e-14 | 12 |
renal cortical epithelial cell | 1.70e-14 | 12 |
epithelial cell of uterus | 1.74e-12 | 6 |
stromal cell of endometrium | 1.74e-12 | 6 |
mast cell | 1.45e-09 | 5 |
basophil mast progenitor cell | 1.45e-09 | 5 |
brush border epithelial cell | 2.10e-09 | 3 |
kidney cortex tubule cell | 2.10e-09 | 3 |
epithelial cell of proximal tubule | 2.10e-09 | 3 |
endocrine cell | 9.35e-08 | 9 |
seromucus secreting cell | 4.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.50e-23 | 106 |
cell type cancer | 1.58e-21 | 143 |
adenocarcinoma | 6.29e-15 | 25 |
cancer | 4.18e-14 | 235 |
disease of cellular proliferation | 1.39e-13 | 239 |
female reproductive endometrioid cancer | 1.74e-12 | 6 |
non-small cell lung carcinoma | 1.03e-09 | 5 |
female reproductive organ cancer | 1.21e-07 | 27 |
clear cell adenocarcinoma | 1.38e-07 | 2 |
tubular adenocarcinoma | 4.07e-07 | 2 |
reproductive organ cancer | 5.35e-07 | 29 |
lung adenocarcinoma | 7.62e-07 | 2 |