FFCP PHASE1:Hg19::chr16:86604624..86604648,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:86604624..86604648,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr16:86604624..86604648,+ | |description=CAGE_peak_at_chr16:86604624..86604648,+ | ||
|id=chr16:86604624..86604648,+ | |id=chr16:86604624..86604648,+ | ||
|ontology_enrichment_celltype=CL:1000449!3.31e-20!16;CL:1000507!8.89e-18!12;CL:1000494!8.89e-18!12;CL:1000497!1.03e-17!18;CL:0002518!1.03e-17!18;CL:0002681!2.32e-12!13;CL:0002584!2.32e-12!13;CL:0000071!2.36e-10!18;CL:0002546!2.36e-10!18;CL:0000222!1.36e-09!119;CL:0002544!3.03e-09!6;CL:1000413!3.31e-09!9;CL:1000612!2.85e-08!7;CL:1000746!2.85e-08!7;CL:0002078!3.10e-08!44;CL:0000115!1.81e-07!35;CL:0002139!1.99e-07!24 | |ontology_enrichment_celltype=CL:1000449!3.31e-20!16;CL:1000507!8.89e-18!12;CL:1000494!8.89e-18!12;CL:1000497!1.03e-17!18;CL:0002518!1.03e-17!18;CL:0002681!2.32e-12!13;CL:0002584!2.32e-12!13;CL:0000071!2.36e-10!18;CL:0002546!2.36e-10!18;CL:0000222!1.36e-09!119;CL:0002544!3.03e-09!6;CL:1000413!3.31e-09!9;CL:1000612!2.85e-08!7;CL:1000746!2.85e-08!7;CL:0002078!3.10e-08!44;CL:0000115!1.81e-07!35;CL:0002139!1.99e-07!24 | ||
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|ontology_enrichment_celltype_v019_2=CL:1000507,1.24e-63,10;CL:1000494,1.24e-63,10;CL:1000449,3.83e-55,15;CL:1000497,1.34e-48,17;CL:0002518,1.34e-48,17;CL:0000650,1.83e-27,2;CL:1000500,1.83e-27,2;CL:1000618,1.83e-27,2;CL:1001318,1.83e-27,2;CL:0002173,1.83e-27,2;CL:0002681,2.35e-27,12;CL:0002584,2.35e-27,12;CL:0000817,3.52e-19,3;CL:1000746,1.24e-17,7;CL:1000612,1.24e-17,7;CL:0000819,4.73e-15,1;CL:0000669,2.95e-14,4;CL:0000785,3.56e-08,2;CL:0000955,3.56e-08,2;CL:0000818,3.56e-08,2;CL:0000954,3.56e-08,2;CL:0000816,3.56e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000954;3.56e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;4.72e-15;1!DOID:8675;4.72e-15;1!DOID:12603;7.13e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.73e-15,1;DOID:8675,4.73e-15,1;DOID:12603,7.13e-15,1 | |||
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|short_description=p@chr16:86604624..86604648,+ | |short_description=p@chr16:86604624..86604648,+ | ||
}} | }} |
Latest revision as of 13:07, 25 July 2015
Short description: | p@chr16:86604624..86604648, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86604624..86604648, + |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.24e-63 | 10 |
nephron tubule epithelial cell | 1.24e-63 | 10 |
epithelial cell of nephron | 3.83e-55 | 15 |
kidney cell | 1.34e-48 | 17 |
kidney epithelial cell | 1.34e-48 | 17 |
mesangial cell | 1.83e-27 | 2 |
kidney interstitial cell | 1.83e-27 | 2 |
juxtaglomerular complex cell | 1.83e-27 | 2 |
renal interstitial pericyte | 1.83e-27 | 2 |
extraglomerular mesangial cell | 1.83e-27 | 2 |
kidney cortical cell | 2.35e-27 | 12 |
renal cortical epithelial cell | 2.35e-27 | 12 |
precursor B cell | 3.52e-19 | 3 |
glomerular cell | 1.24e-17 | 7 |
kidney corpuscule cell | 1.24e-17 | 7 |
B-1 B cell | 4.73e-15 | 1 |
pericyte cell | 2.95e-14 | 4 |
mature B cell | 3.56e-08 | 2 |
pre-B-II cell | 3.56e-08 | 2 |
transitional stage B cell | 3.56e-08 | 2 |
small pre-B-II cell | 3.56e-08 | 2 |
immature B cell | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.73e-15 | 1 |
lymphosarcoma | 4.73e-15 | 1 |
acute leukemia | 7.13e-15 | 1 |