FFCP PHASE1:Hg19::chr17:17480455..17480488,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10400 | |EntrezGene=10400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8830 | |HGNC=8830 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBM1 | |UniProt=Q9UBM1 | ||
|association_with_transcript=-129bp_to_CR457099_5end | |association_with_transcript=-129bp_to_CR457099_5end | ||
|cluster_id=chr17:17480455..17480488,- | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_7_at_PEMT_5end | |description=CAGE_peak_7_at_PEMT_5end | ||
|id=chr17:17480455..17480488,- | |id=chr17:17480455..17480488,- | ||
|ontology_enrichment_celltype=CL:0000136!1.33e-19!15;CL:1000449!2.14e-16!16;CL:1000507!5.67e-16!12;CL:1000494!5.67e-16!12;CL:1000497!3.20e-14!18;CL:0002518!3.20e-14!18;CL:0002681!1.63e-11!13;CL:0002584!1.63e-11!13;CL:0000325!1.37e-08!39;CL:0002521!9.73e-08!3;CL:0002615!1.81e-07!3;CL:0002541!3.98e-07!3;CL:0000239!4.15e-07!3;CL:1000615!4.15e-07!3;CL:0002306!4.15e-07!3 | |ontology_enrichment_celltype=CL:0000136!1.33e-19!15;CL:1000449!2.14e-16!16;CL:1000507!5.67e-16!12;CL:1000494!5.67e-16!12;CL:1000497!3.20e-14!18;CL:0002518!3.20e-14!18;CL:0002681!1.63e-11!13;CL:0002584!1.63e-11!13;CL:0000325!1.37e-08!39;CL:0002521!9.73e-08!3;CL:0002615!1.81e-07!3;CL:0002541!3.98e-07!3;CL:0000239!4.15e-07!3;CL:1000615!4.15e-07!3;CL:0002306!4.15e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.32e-41;13!CL:1000507;4.99e-18;10!CL:1000494;4.99e-18;10!CL:1000449;5.59e-15;15!CL:1000497;4.65e-13;17!CL:0002518;4.65e-13;17!CL:0002521;7.17e-13;3!CL:0002615;2.09e-12;3!CL:0002541;8.81e-12;3!CL:0000239;1.19e-11;3!CL:1000615;1.19e-11;3!CL:0002306;1.19e-11;3!CL:0002681;8.38e-11;12!CL:0002584;8.38e-11;12!CL:0000650;2.88e-09;2!CL:1000500;2.88e-09;2!CL:1000618;2.88e-09;2!CL:1001318;2.88e-09;2!CL:0002173;2.88e-09;2!CL:0002617;7.26e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.28e-35,15;CL:1000507,4.55e-18,10;CL:1000494,4.55e-18,10;CL:1000449,5.08e-15,15;CL:1000497,4.28e-13,17;CL:0002518,4.28e-13,17;CL:0002521,7.46e-13,3;CL:0002615,2.30e-12,3;CL:0002541,9.68e-12,3;CL:0000239,1.04e-11,3;CL:1000615,1.04e-11,3;CL:0002306,1.04e-11,3;CL:0002681,7.67e-11,12;CL:0002584,7.67e-11,12;CL:0000650,2.88e-09,2;CL:1000500,2.88e-09,2;CL:1000618,2.88e-09,2;CL:1001318,2.88e-09,2;CL:0002173,2.88e-09,2;CL:0002617,7.40e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004876!3.98e-20!20;UBERON:0000080!7.81e-20!18;UBERON:0002120!7.81e-20!18;UBERON:0004875!7.81e-20!18;UBERON:0005721!7.81e-20!18;UBERON:0005754!7.81e-20!18;UBERON:0007297!7.81e-20!18;UBERON:0006555!2.74e-18!17;UBERON:0005103!2.74e-18!17;UBERON:0000083!2.74e-18!17;UBERON:0009201!2.74e-18!17;UBERON:0004819!2.74e-18!17;UBERON:0006553!2.74e-18!17;UBERON:0003074!2.74e-18!17;UBERON:0003060!2.74e-18!17;UBERON:0002113!6.35e-18!27;UBERON:0003918!6.35e-18!27;UBERON:0005095!6.35e-18!27;UBERON:0007687!6.35e-18!27;UBERON:0003887!1.96e-16!21;UBERON:0004211!2.14e-16!16;UBERON:0001285!2.14e-16!16;UBERON:0007684!2.14e-16!16;UBERON:0003220!2.14e-16!16;UBERON:0004208!2.14e-16!16;UBERON:0003886!3.17e-16!63;UBERON:0000489!3.81e-16!32;UBERON:0009773!5.67e-16!12;UBERON:0001231!5.67e-16!12;UBERON:0004810!5.67e-16!12;UBERON:0002553!4.08e-15!70;UBERON:0003064!5.87e-15!37;UBERON:0000058!1.07e-14!26;UBERON:0001008!3.16e-14!45;UBERON:0006554!4.10e-13!44;UBERON:0001225!1.63e-11!13;UBERON:0008987!1.63e-11!13;UBERON:0002417!2.50e-10!61;UBERON:0000916!2.50e-10!61;UBERON:0000464!5.05e-10!104;UBERON:0001851!5.56e-09!16;UBERON:0000353!2.44e-08!17;UBERON:0003133!5.82e-08!48;UBERON:0002190!9.73e-08!3;UBERON:0000466!1.46e-07!126;UBERON:0005156!2.03e-07!59;UBERON:0000990!2.03e-07!59;UBERON:0005172!2.13e-07!55;UBERON:0005173!2.13e-07!55;UBERON:0006947!2.23e-07!3;UBERON:0004054!2.23e-07!3;UBERON:0003103!3.05e-07!69;UBERON:0002072!3.40e-07!5;UBERON:0000476!3.98e-07!3;UBERON:0000920!3.98e-07!3;UBERON:0006853!4.15e-07!3;UBERON:0007685!4.15e-07!3;UBERON:0004134!4.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.99e-18;10!UBERON:0009773;4.99e-18;10!UBERON:0001231;4.99e-18;10!UBERON:0004810;4.99e-18;10!UBERON:0006555;5.59e-15;15!UBERON:0004819;5.59e-15;15!UBERON:0001285;5.59e-15;15!UBERON:0007684;5.59e-15;15!UBERON:0002190;7.17e-13;3!UBERON:0003124;8.81e-12;3!UBERON:0000920;8.81e-12;3!UBERON:0006853;1.19e-11;3!UBERON:0007685;1.19e-11;3!UBERON:0004134;1.19e-11;3!UBERON:0002113;3.18e-11;24!UBERON:0011143;3.18e-11;24!UBERON:0001225;8.38e-11;12!UBERON:0008987;8.38e-11;12!UBERON:0003567;2.88e-09;2!UBERON:0003838;2.88e-09;2!UBERON:0003586;2.88e-09;2!UBERON:0005169;2.88e-09;2!UBERON:0002321;2.88e-09;2!UBERON:0005215;2.88e-09;2!UBERON:0002303;2.88e-09;2!UBERON:0002319;2.88e-09;2!UBERON:0000489;5.25e-09;29!UBERON:0005631;5.46e-09;10!UBERON:0000158;5.46e-09;10!UBERON:0006554;1.19e-08;30!UBERON:0001008;1.19e-08;30!UBERON:0001851;1.64e-08;15!UBERON:0000353;1.64e-08;15!UBERON:0002072;7.08e-08;5!UBERON:0001013;5.74e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.55e-18,10;UBERON:0006555,6.30e-18,16;UBERON:0004819,6.30e-18,16;UBERON:0004211,5.08e-15,15;UBERON:0009773,5.08e-15,15;UBERON:0001231,5.08e-15,15;UBERON:0001285,5.08e-15,15;UBERON:0007684,5.08e-15,15;UBERON:0004208,5.08e-15,15;UBERON:0002190,7.46e-13,3;UBERON:0002113,7.67e-13,26;UBERON:0003918,7.67e-13,26;UBERON:0011143,7.67e-13,26;UBERON:0005095,7.67e-13,26;UBERON:0007687,7.67e-13,26;UBERON:0000920,9.68e-12,3;UBERON:0006853,1.04e-11,3;UBERON:0007685,1.04e-11,3;UBERON:0004134,1.04e-11,3;UBERON:0001225,7.67e-11,12;UBERON:0008987,7.67e-11,12;UBERON:0000489,1.89e-10,31;UBERON:0001008,2.08e-10,48;UBERON:0003567,2.88e-09,2;UBERON:0003838,2.88e-09,2;UBERON:0003586,2.88e-09,2;UBERON:0005169,2.88e-09,2;UBERON:0002321,2.88e-09,2;UBERON:0005215,2.88e-09,2;UBERON:0002303,2.88e-09,2;UBERON:0002319,2.88e-09,2;UBERON:0006554,4.41e-09,47;UBERON:0005631,6.33e-09,14;UBERON:0000158,6.33e-09,14;UBERON:0003124,1.08e-08,7;UBERON:0001851,1.53e-08,15;UBERON:0000353,1.53e-08,15;UBERON:0005103,4.00e-08,8;UBERON:0000083,4.00e-08,8;UBERON:0009201,4.00e-08,8;UBERON:0006553,4.00e-08,8;UBERON:0003074,4.00e-08,8;UBERON:0003060,4.00e-08,8;UBERON:0002417,5.90e-08,60;UBERON:0000916,5.90e-08,60;UBERON:0002072,7.25e-08,5;UBERON:0002553,1.13e-07,61;UBERON:0003886,1.15e-07,54;UBERON:0003133,3.08e-07,48;UBERON:0000080,3.21e-07,9;UBERON:0002120,3.21e-07,9;UBERON:0004875,3.21e-07,9;UBERON:0005721,3.21e-07,9;UBERON:0005754,3.21e-07,9;UBERON:0007297,3.21e-07,9;UBERON:0001013,5.74e-07,14;UBERON:0000478,9.84e-07,24 | |||
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| ||
|short_description=p7@PEMT | |short_description=p7@PEMT | ||
}} | }} |
Latest revision as of 21:40, 18 September 2015
Short description: | p7@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PEMT_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | -129bp_to_CR457099_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | Q9UBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.28e-35 | 15 |
kidney tubule cell | 4.55e-18 | 10 |
nephron tubule epithelial cell | 4.55e-18 | 10 |
epithelial cell of nephron | 5.08e-15 | 15 |
kidney cell | 4.28e-13 | 17 |
kidney epithelial cell | 4.28e-13 | 17 |
subcutaneous fat cell | 7.46e-13 | 3 |
adipocyte of omentum tissue | 2.30e-12 | 3 |
chorionic membrane mesenchymal stem cell | 9.68e-12 | 3 |
brush border epithelial cell | 1.04e-11 | 3 |
kidney cortex tubule cell | 1.04e-11 | 3 |
epithelial cell of proximal tubule | 1.04e-11 | 3 |
kidney cortical cell | 7.67e-11 | 12 |
renal cortical epithelial cell | 7.67e-11 | 12 |
mesangial cell | 2.88e-09 | 2 |
kidney interstitial cell | 2.88e-09 | 2 |
juxtaglomerular complex cell | 2.88e-09 | 2 |
renal interstitial pericyte | 2.88e-09 | 2 |
extraglomerular mesangial cell | 2.88e-09 | 2 |
adipocyte of breast | 7.40e-09 | 2 |