FFCP PHASE1:Hg19::chr17:1395954..1396027,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4641 | |EntrezGene=4641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7597 | |HGNC=7597 | ||
|TSSclassifier=strong | |||
|UniProt=O00159 | |UniProt=O00159 | ||
|association_with_transcript=0bp_to_ENST00000359786,NM_001080779,uc002fsp.2_5end | |association_with_transcript=0bp_to_ENST00000359786,NM_001080779,uc002fsp.2_5end | ||
|cluster_id=chr17:1395954..1396027,- | |||
|coexpression_cluster_id=C3095 | |||
|description=CAGE_peak_3_at_MYO1C_5end | |description=CAGE_peak_3_at_MYO1C_5end | ||
|id=chr17:1395954..1396027,- | |id=chr17:1395954..1396027,- | ||
|ontology_enrichment_celltype=CL:0000213!1.98e-19!57;CL:0000215!1.98e-19!57;CL:0000115!6.82e-19!35;CL:0002139!4.37e-18!24;CL:0002078!1.86e-17!44;CL:0000071!2.72e-14!18;CL:0002546!2.72e-14!18;CL:0000066!3.36e-10!254;CL:0000222!3.70e-10!119;CL:1000449!1.56e-08!16;CL:0000076!2.19e-08!62;CL:1000413!3.65e-08!9;CL:1000497!1.40e-07!18;CL:0002518!1.40e-07!18;CL:0002681!5.56e-07!13;CL:0002584!5.56e-07!13 | |ontology_enrichment_celltype=CL:0000213!1.98e-19!57;CL:0000215!1.98e-19!57;CL:0000115!6.82e-19!35;CL:0002139!4.37e-18!24;CL:0002078!1.86e-17!44;CL:0000071!2.72e-14!18;CL:0002546!2.72e-14!18;CL:0000066!3.36e-10!254;CL:0000222!3.70e-10!119;CL:1000449!1.56e-08!16;CL:0000076!2.19e-08!62;CL:1000413!3.65e-08!9;CL:1000497!1.40e-07!18;CL:0002518!1.40e-07!18;CL:0002681!5.56e-07!13;CL:0002584!5.56e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.94e-22;24!CL:0000115;1.13e-20;36!CL:0000071;2.13e-17;18!CL:0002078;2.02e-14;45!CL:0000213;5.77e-14;58!CL:0000215;5.77e-14;58!CL:1000449;1.23e-11;15!CL:1000497;1.48e-10;17!CL:0002518;1.48e-10;17!CL:1000413;8.85e-10;9!CL:0002681;1.09e-09;12!CL:0002584;1.09e-09;12!CL:1000507;2.26e-07;10!CL:1000494;2.26e-07;10!CL:0002544;5.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.48e-25,36;CL:0000213,1.02e-22,58;CL:0000215,1.02e-22,58;CL:0002078,2.34e-22,45;CL:0002139,4.08e-22,24;CL:0000071,2.16e-17,18;CL:0002546,2.16e-17,18;CL:0000066,8.78e-12,253;CL:1000449,1.31e-11,15;CL:1000497,1.89e-10,17;CL:0002518,1.89e-10,17;CL:0000076,2.74e-10,63;CL:1000413,8.96e-10,9;CL:0002681,1.13e-09,12;CL:0002584,1.13e-09,12;CL:0000222,3.91e-08,121;CL:1000507,2.37e-07,10;CL:1000494,2.37e-07,10;CL:0002544,5.21e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.13e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.16e-16!312;UBERON:0000483!1.24e-16!309;UBERON:0004111!1.67e-14!241;UBERON:0001986!2.72e-14!18;UBERON:0004638!2.72e-14!18;UBERON:0004852!2.72e-14!18;UBERON:0003914!8.69e-14!118;UBERON:0000025!2.89e-13!194;UBERON:0000477!4.50e-13!286;UBERON:0000487!8.76e-13!22;UBERON:0006914!2.87e-11!25;UBERON:0000468!1.24e-10!659;UBERON:0003103!2.59e-10!69;UBERON:0009569!5.43e-10!113;UBERON:0002417!1.39e-09!61;UBERON:0000916!1.39e-09!61;UBERON:0002049!2.52e-09!79;UBERON:0007798!2.52e-09!79;UBERON:0000064!2.66e-09!219;UBERON:0000080!3.93e-09!18;UBERON:0002120!3.93e-09!18;UBERON:0004875!3.93e-09!18;UBERON:0005721!3.93e-09!18;UBERON:0005754!3.93e-09!18;UBERON:0007297!3.93e-09!18;UBERON:0006555!7.54e-09!17;UBERON:0005103!7.54e-09!17;UBERON:0000083!7.54e-09!17;UBERON:0009201!7.54e-09!17;UBERON:0004819!7.54e-09!17;UBERON:0006553!7.54e-09!17;UBERON:0003074!7.54e-09!17;UBERON:0003060!7.54e-09!17;UBERON:0005172!1.03e-08!55;UBERON:0005173!1.03e-08!55;UBERON:0004876!1.40e-08!20;UBERON:0000055!1.56e-08!69;UBERON:0004211!1.56e-08!16;UBERON:0001285!1.56e-08!16;UBERON:0007684!1.56e-08!16;UBERON:0003220!1.56e-08!16;UBERON:0004208!1.56e-08!16;UBERON:0001008!1.76e-08!45;UBERON:0007023!1.87e-08!115;UBERON:0000489!2.34e-08!32;UBERON:0003887!3.06e-08!21;UBERON:0003915!3.65e-08!9;UBERON:0004700!3.65e-08!9;UBERON:0001917!3.65e-08!9;UBERON:0000058!4.27e-08!26;UBERON:0006554!4.32e-08!44;UBERON:0000481!4.65e-08!347;UBERON:0005177!6.43e-08!107;UBERON:0002113!1.09e-07!27;UBERON:0003918!1.09e-07!27;UBERON:0005095!1.09e-07!27;UBERON:0007687!1.09e-07!27;UBERON:0004872!1.26e-07!84;UBERON:0000353!1.35e-07!17;UBERON:0000466!2.79e-07!126;UBERON:0003064!3.34e-07!37;UBERON:0001851!4.48e-07!16;UBERON:0001638!4.62e-07!9;UBERON:0003920!4.62e-07!9;UBERON:0004582!4.62e-07!9;UBERON:0000467!5.03e-07!625;UBERON:0001225!5.56e-07!13;UBERON:0008987!5.56e-07!13;UBERON:0000480!7.03e-07!626;UBERON:0000922!9.59e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.13e-17;18!UBERON:0001986;2.13e-17;18!UBERON:0004852;2.13e-17;18!UBERON:0000487;4.28e-16;22!UBERON:0006914;4.96e-13;25!UBERON:0006554;1.94e-12;30!UBERON:0001008;1.94e-12;30!UBERON:0000353;1.10e-11;15!UBERON:0006555;1.23e-11;15!UBERON:0004819;1.23e-11;15!UBERON:0001285;1.23e-11;15!UBERON:0007684;1.23e-11;15!UBERON:0000490;1.43e-11;33!UBERON:0001851;7.22e-10;15!UBERON:0003915;8.85e-10;9!UBERON:0004700;8.85e-10;9!UBERON:0001917;8.85e-10;9!UBERON:0001225;1.09e-09;12!UBERON:0008987;1.09e-09;12!UBERON:0002113;7.75e-09;24!UBERON:0011143;7.75e-09;24!UBERON:0000489;1.00e-08;29!UBERON:0001638;2.03e-08;9!UBERON:0003920;2.03e-08;9!UBERON:0004582;2.03e-08;9!UBERON:0004211;2.26e-07;10!UBERON:0009773;2.26e-07;10!UBERON:0001231;2.26e-07;10!UBERON:0004810;2.26e-07;10 | |||
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| ||
|short_description=p3@MYO1C | |short_description=p3@MYO1C | ||
}} | }} |
Latest revision as of 17:07, 18 September 2015
Short description: | p3@MYO1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYO1C_5end |
Coexpression cluster: | C3095_Endothelial_mature_Renal_aorta_Hepatic_melanoma_gall |
Association with transcript: | 0bp_to_ENST00000359786, NM_001080779, uc002fsp.2_5end |
EntrezGene: | MYO1C |
HGNC: | 7597 |
UniProt: | O00159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.48e-25 | 36 |
lining cell | 1.02e-22 | 58 |
barrier cell | 1.02e-22 | 58 |
meso-epithelial cell | 2.34e-22 | 45 |
endothelial cell of vascular tree | 4.08e-22 | 24 |
blood vessel endothelial cell | 2.16e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.16e-17 | 18 |
epithelial cell | 8.78e-12 | 253 |
epithelial cell of nephron | 1.31e-11 | 15 |
kidney cell | 1.89e-10 | 17 |
kidney epithelial cell | 1.89e-10 | 17 |
squamous epithelial cell | 2.74e-10 | 63 |
endothelial cell of artery | 8.96e-10 | 9 |
kidney cortical cell | 1.13e-09 | 12 |
renal cortical epithelial cell | 1.13e-09 | 12 |
mesodermal cell | 3.91e-08 | 121 |
kidney tubule cell | 2.37e-07 | 10 |
nephron tubule epithelial cell | 2.37e-07 | 10 |
aortic endothelial cell | 5.21e-07 | 6 |