FFCP PHASE1:Hg19::chr16:66952781..66952794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1014 | |EntrezGene=1014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1755 | |HGNC=1755 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_uc002eql.2,uc002eqm.2,uc010cdy.2_5end | |association_with_transcript=-15bp_to_uc002eql.2,uc002eqm.2,uc010cdy.2_5end | ||
|cluster_id=chr16:66952781..66952794,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_2_at_CDH16_5end | |description=CAGE_peak_2_at_CDH16_5end | ||
|id=chr16:66952781..66952794,- | |id=chr16:66952781..66952794,- | ||
|ontology_enrichment_celltype=CL:1000497!1.07e-17!18;CL:0002518!1.07e-17!18;CL:1000507!2.42e-17!12;CL:1000494!2.42e-17!12;CL:1000449!1.16e-12!16;CL:0002681!2.45e-12!13;CL:0002584!2.45e-12!13;CL:0000239!2.36e-11!3;CL:1000615!2.36e-11!3;CL:0002306!2.36e-11!3;CL:0000159!5.21e-08!2;CL:0000223!8.31e-07!59;CL:0000066!9.70e-07!254 | |ontology_enrichment_celltype=CL:1000497!1.07e-17!18;CL:0002518!1.07e-17!18;CL:1000507!2.42e-17!12;CL:1000494!2.42e-17!12;CL:1000449!1.16e-12!16;CL:0002681!2.45e-12!13;CL:0002584!2.45e-12!13;CL:0000239!2.36e-11!3;CL:1000615!2.36e-11!3;CL:0002306!2.36e-11!3;CL:0000159!5.21e-08!2;CL:0000223!8.31e-07!59;CL:0000066!9.70e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000650;2.99e-15;2!CL:1000500;2.99e-15;2!CL:1000618;2.99e-15;2!CL:1001318;2.99e-15;2!CL:0002173;2.99e-15;2!CL:1000497;1.16e-14;17!CL:0002518;1.16e-14;17!CL:1000507;1.53e-11;10!CL:1000494;1.53e-11;10!CL:0002149;2.96e-11;6!CL:0002255;2.96e-11;6!CL:0000239;2.44e-10;3!CL:1000615;2.44e-10;3!CL:0002306;2.44e-10;3!CL:0002681;1.21e-09;12!CL:0002584;1.21e-09;12!CL:0000313;7.85e-09;1!CL:0000669;4.54e-08;4!CL:1000449;9.68e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.99e-15,2;CL:1000500,2.99e-15,2;CL:1000618,2.99e-15,2;CL:1001318,2.99e-15,2;CL:0002173,2.99e-15,2;CL:1000497,1.18e-14,17;CL:0002518,1.18e-14,17;CL:1000507,1.55e-11,10;CL:1000494,1.55e-11,10;CL:0002149,2.75e-11,6;CL:0002255,2.75e-11,6;CL:0000239,2.49e-10,3;CL:1000615,2.49e-10,3;CL:0002306,2.49e-10,3;CL:0002681,1.22e-09,12;CL:0002584,1.22e-09,12;CL:0000313,8.15e-09,1;CL:0000669,4.54e-08,4;CL:1000449,9.77e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.01e-12;10!UBERON:0007687;4.01e-12;10!UBERON:0007123;8.78e-07;5 | |||
|ontology_enrichment_disease=DOID:299!2.72e-14!25;DOID:305!4.40e-08!106;DOID:4468!6.66e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.96e-11;6!DOID:120;4.54e-09;27!DOID:2152;7.85e-09;1!DOID:193;2.08e-08;29!DOID:299;5.69e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.75e-11,6;DOID:120,4.68e-09,27;DOID:2152,8.15e-09,1;DOID:193,2.14e-08,29;DOID:299,5.84e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0002113!8.35e-23!27;UBERON:0003918!8.35e-23!27;UBERON:0005095!8.35e-23!27;UBERON:0007687!8.35e-23!27;UBERON:0000489!2.02e-21!32;UBERON:0006554!6.95e-19!44;UBERON:0001008!2.27e-18!45;UBERON:0005172!2.35e-18!55;UBERON:0005173!2.35e-18!55;UBERON:0009773!2.42e-17!12;UBERON:0001231!2.42e-17!12;UBERON:0004810!2.42e-17!12;UBERON:0002417!4.44e-16!61;UBERON:0000916!4.44e-16!61;UBERON:0006555!4.35e-15!17;UBERON:0005103!4.35e-15!17;UBERON:0000083!4.35e-15!17;UBERON:0009201!4.35e-15!17;UBERON:0004819!4.35e-15!17;UBERON:0006553!4.35e-15!17;UBERON:0003074!4.35e-15!17;UBERON:0003060!4.35e-15!17;UBERON:0000080!3.73e-14!18;UBERON:0002120!3.73e-14!18;UBERON:0004875!3.73e-14!18;UBERON:0005721!3.73e-14!18;UBERON:0005754!3.73e-14!18;UBERON:0007297!3.73e-14!18;UBERON:0004211!1.16e-12!16;UBERON:0001285!1.16e-12!16;UBERON:0007684!1.16e-12!16;UBERON:0003220!1.16e-12!16;UBERON:0004208!1.16e-12!16;UBERON:0004876!1.44e-12!20;UBERON:0005177!1.49e-12!107;UBERON:0001225!2.45e-12!13;UBERON:0008987!2.45e-12!13;UBERON:0003887!6.90e-12!21;UBERON:0006853!2.36e-11!3;UBERON:0007685!2.36e-11!3;UBERON:0004134!2.36e-11!3;UBERON:0003064!1.05e-10!37;UBERON:0003103!1.58e-10!69;UBERON:0009569!1.74e-10!113;UBERON:0001851!7.88e-10!16;UBERON:0000058!2.80e-09!26;UBERON:0000353!3.43e-09!17;UBERON:0000341!4.37e-08!2;UBERON:0000466!1.12e-07!126;UBERON:0005795!5.49e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.21e-18;24!UBERON:0011143;3.21e-18;24!UBERON:0003567;2.99e-15;2!UBERON:0003838;2.99e-15;2!UBERON:0003586;2.99e-15;2!UBERON:0005169;2.99e-15;2!UBERON:0002321;2.99e-15;2!UBERON:0005215;2.99e-15;2!UBERON:0002303;2.99e-15;2!UBERON:0002319;2.99e-15;2!UBERON:0000489;6.87e-15;29!UBERON:0006554;2.34e-14;30!UBERON:0001008;2.34e-14;30!UBERON:0004175;1.00e-11;21!UBERON:0004211;1.53e-11;10!UBERON:0009773;1.53e-11;10!UBERON:0001231;1.53e-11;10!UBERON:0004810;1.53e-11;10!UBERON:0006853;2.44e-10;3!UBERON:0007685;2.44e-10;3!UBERON:0004134;2.44e-10;3!UBERON:0000995;2.60e-10;17!UBERON:0003975;9.97e-10;18!UBERON:0001225;1.21e-09;12!UBERON:0008987;1.21e-09;12!UBERON:0004911;7.85e-09;1!UBERON:0001301;1.59e-08;1!UBERON:0003133;3.22e-08;44!UBERON:0003891;4.54e-08;4!UBERON:0001851;9.68e-08;15!UBERON:0006555;9.68e-08;15!UBERON:0000353;9.68e-08;15!UBERON:0004819;9.68e-08;15!UBERON:0001285;9.68e-08;15!UBERON:0007684;9.68e-08;15!UBERON:0003134;1.23e-07;33!UBERON:0005172;6.57e-07;52!UBERON:0005173;6.57e-07;52!UBERON:0002046;8.78e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.07e-21,26;UBERON:0003918,4.07e-21,26;UBERON:0011143,4.07e-21,26;UBERON:0005095,4.07e-21,26;UBERON:0007687,4.07e-21,26;UBERON:0000489,1.72e-17,31;UBERON:0003567,2.99e-15,2;UBERON:0003838,2.99e-15,2;UBERON:0003586,2.99e-15,2;UBERON:0005169,2.99e-15,2;UBERON:0002321,2.99e-15,2;UBERON:0005215,2.99e-15,2;UBERON:0002303,2.99e-15,2;UBERON:0002319,2.99e-15,2;UBERON:0005172,1.20e-11,54;UBERON:0005173,1.20e-11,54;UBERON:0004810,1.55e-11,10;UBERON:0006554,4.61e-11,47;UBERON:0006555,6.20e-11,16;UBERON:0004819,6.20e-11,16;UBERON:0001008,8.38e-11,48;UBERON:0006853,2.49e-10,3;UBERON:0007685,2.49e-10,3;UBERON:0004134,2.49e-10,3;UBERON:0002417,2.57e-10,60;UBERON:0000916,2.57e-10,60;UBERON:0004175,8.99e-10,25;UBERON:0001225,1.22e-09,12;UBERON:0008987,1.22e-09,12;UBERON:0004911,8.15e-09,1;UBERON:0005103,1.38e-08,8;UBERON:0000083,1.38e-08,8;UBERON:0009201,1.38e-08,8;UBERON:0006553,1.38e-08,8;UBERON:0003074,1.38e-08,8;UBERON:0003060,1.38e-08,8;UBERON:0001301,1.71e-08,1;UBERON:0003133,2.18e-08,48;UBERON:0000995,2.55e-08,21;UBERON:0003891,4.54e-08,4;UBERON:0005795,6.23e-08,22;UBERON:0003975,6.23e-08,22;UBERON:0001851,9.77e-08,15;UBERON:0004211,9.77e-08,15;UBERON:0009773,9.77e-08,15;UBERON:0000353,9.77e-08,15;UBERON:0001231,9.77e-08,15;UBERON:0001285,9.77e-08,15;UBERON:0007684,9.77e-08,15;UBERON:0004208,9.77e-08,15;UBERON:0000080,1.10e-07,9;UBERON:0002120,1.10e-07,9;UBERON:0004875,1.10e-07,9;UBERON:0005721,1.10e-07,9;UBERON:0005754,1.10e-07,9;UBERON:0007297,1.10e-07,9;UBERON:0003103,3.22e-07,68;UBERON:0002046,8.65e-07,5;UBERON:0004117,8.65e-07,5;UBERON:0007689,8.65e-07,5;UBERON:0007123,8.65e-07,5;UBERON:0003091,8.65e-07,5 | |||
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| ||
|short_description=p2@CDH16 | |short_description=p2@CDH16 | ||
}} | }} |
Latest revision as of 09:04, 17 September 2015
Short description: | p2@CDH16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH16_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -15bp_to_uc002eql.2, uc002eqm.2, uc010cdy.2_5end |
EntrezGene: | CDH16 |
HGNC: | 1755 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.99e-15 | 2 |
kidney interstitial cell | 2.99e-15 | 2 |
juxtaglomerular complex cell | 2.99e-15 | 2 |
renal interstitial pericyte | 2.99e-15 | 2 |
extraglomerular mesangial cell | 2.99e-15 | 2 |
kidney cell | 1.18e-14 | 17 |
kidney epithelial cell | 1.18e-14 | 17 |
kidney tubule cell | 1.55e-11 | 10 |
nephron tubule epithelial cell | 1.55e-11 | 10 |
epithelial cell of uterus | 2.75e-11 | 6 |
stromal cell of endometrium | 2.75e-11 | 6 |
brush border epithelial cell | 2.49e-10 | 3 |
kidney cortex tubule cell | 2.49e-10 | 3 |
epithelial cell of proximal tubule | 2.49e-10 | 3 |
kidney cortical cell | 1.22e-09 | 12 |
renal cortical epithelial cell | 1.22e-09 | 12 |
serous secreting cell | 8.15e-09 | 1 |
pericyte cell | 4.54e-08 | 4 |
epithelial cell of nephron | 9.77e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.75e-11 | 6 |
female reproductive organ cancer | 4.68e-09 | 27 |
ovary epithelial cancer | 8.15e-09 | 1 |
reproductive organ cancer | 2.14e-08 | 29 |
adenocarcinoma | 5.84e-07 | 25 |