FFCP PHASE1:Hg19::chr13:45390377..45390382,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:45390377..45390382,+ | |||
|coexpression_cluster_id=C461 | |||
|description=CAGE_peak_at_chr13:45390377..45390382,+ | |description=CAGE_peak_at_chr13:45390377..45390382,+ | ||
|id=chr13:45390377..45390382,+ | |id=chr13:45390377..45390382,+ | ||
|ontology_enrichment_celltype=CL:0000082!8.65e-14!19;CL:0000066!1.03e-10!254;CL:0002076!9.02e-09!43;CL:0000223!1.13e-08!59;CL:0002251!3.04e-07!21;CL:0000322!4.73e-07!3 | |ontology_enrichment_celltype=CL:0000082!8.65e-14!19;CL:0000066!1.03e-10!254;CL:0002076!9.02e-09!43;CL:0000223!1.13e-08!59;CL:0002251!3.04e-07!21;CL:0000322!4.73e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002188;5.15e-21;5!CL:1000746;1.91e-15;7!CL:1000612;1.91e-15;7!CL:0002681;1.33e-09;12!CL:0002584;1.33e-09;12!CL:1000449;5.93e-08;15!CL:1000497;3.58e-07;17!CL:0002518;3.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,5.15e-21,5;CL:1000746,1.91e-15,7;CL:1000612,1.91e-15,7;CL:0002681,1.33e-09,12;CL:0002584,1.33e-09,12;CL:1000449,5.93e-08,15;CL:1000497,3.58e-07,17;CL:0002518,3.58e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.74e-50;2!UBERON:0010056;2.74e-50;2 | |||
|ontology_enrichment_disease=DOID:305!3.05e-18!106;DOID:0050687!4.89e-16!143;DOID:162!3.91e-15!235;DOID:14566!1.17e-14!239;DOID:1324!4.99e-10!15;DOID:0050615!2.31e-09!16;DOID:3908!2.01e-08!5;DOID:1749!7.64e-08!14;DOID:0050686!3.86e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004802!8.65e-14!19;UBERON:0000115!8.65e-14!19;UBERON:0002048!9.86e-12!22;UBERON:0000117!9.86e-12!22;UBERON:0000171!9.86e-12!22;UBERON:0000170!9.86e-12!22;UBERON:0005597!9.86e-12!22;UBERON:0000118!9.86e-12!22;UBERON:0005153!5.88e-10!37;UBERON:0000344!1.40e-09!12;UBERON:0003729!5.41e-09!5;UBERON:0004807!6.07e-09!28;UBERON:0001007!8.55e-09!155;UBERON:0001555!8.55e-09!155;UBERON:0007026!8.55e-09!155;UBERON:0004119!1.22e-08!169;UBERON:0000925!1.22e-08!169;UBERON:0006595!1.22e-08!169;UBERON:0000077!4.23e-08!130;UBERON:0004921!4.35e-08!129;UBERON:0004185!4.35e-08!129;UBERON:0005911!1.27e-07!82;UBERON:0000464!2.18e-07!104;UBERON:0000466!2.18e-07!126;UBERON:0005178!3.83e-07!34;UBERON:0002224!3.83e-07!34;UBERON:0004821!4.73e-07!3;UBERON:0003215!4.73e-07!3;UBERON:0002299!4.73e-07!3;UBERON:0006524!4.73e-07!3;UBERON:0008874!4.73e-07!3;UBERON:0002169!4.73e-07!3;UBERON:0004894!4.73e-07!3;UBERON:0001041!4.80e-07!98;UBERON:0005181!6.64e-07!35;UBERON:0005157!1.00e-06!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.27e-34;3!UBERON:0001033;4.27e-34;3!UBERON:0003343;5.56e-26;4!UBERON:0004785;5.56e-26;4!UBERON:0000974;7.67e-18;6!UBERON:0000074;1.91e-15;7!UBERON:0001229;1.91e-15;7!UBERON:0001225;1.33e-09;12!UBERON:0008987;1.33e-09;12!UBERON:0003729;5.28e-09;13!UBERON:0001851;5.93e-08;15!UBERON:0006555;5.93e-08;15!UBERON:0000353;5.93e-08;15!UBERON:0004819;5.93e-08;15!UBERON:0001285;5.93e-08;15!UBERON:0007684;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.27e-34,3;UBERON:0001033,4.27e-34,3;UBERON:0010056,4.27e-34,3;UBERON:0003343,5.56e-26,4;UBERON:0004785,5.56e-26,4;UBERON:0010532,1.91e-15,7;UBERON:0000074,1.91e-15,7;UBERON:0001229,1.91e-15,7;UBERON:0001230,1.91e-15,7;UBERON:0003220,1.91e-15,7;UBERON:0005749,1.91e-15,7;UBERON:0004199,1.91e-15,7;UBERON:0004209,1.91e-15,7;UBERON:0004198,1.91e-15,7;UBERON:0005103,1.07e-13,8;UBERON:0000083,1.07e-13,8;UBERON:0009201,1.07e-13,8;UBERON:0006553,1.07e-13,8;UBERON:0003074,1.07e-13,8;UBERON:0003060,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0000974,2.73e-11,10;UBERON:0001042,2.73e-11,10;UBERON:0009145,2.73e-11,10;UBERON:0006562,2.16e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0001225,1.33e-09,12;UBERON:0008987,1.33e-09,12;UBERON:0003887,1.33e-09,12;UBERON:0003729,5.28e-09,13;UBERON:0001851,5.93e-08,15;UBERON:0004211,5.93e-08,15;UBERON:0009773,5.93e-08,15;UBERON:0000353,5.93e-08,15;UBERON:0001231,5.93e-08,15;UBERON:0001285,5.93e-08,15;UBERON:0007684,5.93e-08,15;UBERON:0004208,5.93e-08,15;UBERON:0006555,1.54e-07,16;UBERON:0004819,1.54e-07,16;UBERON:0003103,4.47e-07,68;UBERON:0008814,7.18e-07,18 | |||
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| ||
|short_description=p@chr13:45390377..45390382,+ | |short_description=p@chr13:45390377..45390382,+ | ||
}} | }} |
Latest revision as of 16:13, 24 July 2015
Short description: | p@chr13:45390377..45390382, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:45390377..45390382, + |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 5.15e-21 | 5 |
glomerular cell | 1.91e-15 | 7 |
kidney corpuscule cell | 1.91e-15 | 7 |
kidney cortical cell | 1.33e-09 | 12 |
renal cortical epithelial cell | 1.33e-09 | 12 |
epithelial cell of nephron | 5.93e-08 | 15 |
kidney cell | 3.58e-07 | 17 |
kidney epithelial cell | 3.58e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |