FFCP PHASE1:Mm9::chr1:165860136..165860208,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240880 | |EntrezGene=240880 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=775 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DBQ7 | |UniProt=Q9DBQ7 | ||
|association_with_transcript=0bp_to_NM_028776,uc007dhq.1,uc007dhr.1_5end | |association_with_transcript=0bp_to_NM_028776,uc007dhq.1,uc007dhr.1_5end | ||
|cluster_id=chr1:165860136..165860208,+ | |||
|description=CAGE_peak_1_at_Scyl3_5end | |description=CAGE_peak_1_at_Scyl3_5end | ||
|id=chr1:165860136..165860208,+ | |id=chr1:165860136..165860208,+ | ||
|ontology_enrichment_celltype=CL:0002031!5.42e-07!25;CL:0000988!6.26e-07!32;CL:0002032!6.26e-07!32;CL:0000037!6.26e-07!32;CL:0000566!6.26e-07!32;CL:0000837!6.26e-07!32 | |ontology_enrichment_celltype=CL:0002031!5.42e-07!25;CL:0000988!6.26e-07!32;CL:0002032!6.26e-07!32;CL:0000037!6.26e-07!32;CL:0000566!6.26e-07!32;CL:0000837!6.26e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.42e-07,25;CL:0000988,6.26e-07,32;CL:0002032,6.26e-07,32;CL:0000037,6.26e-07,32;CL:0000837,6.26e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!1.33e-13!55;UBERON:0000490!5.73e-13!66;UBERON:0004119!7.19e-13!130;UBERON:0000925!7.19e-13!130;UBERON:0006595!7.19e-13!130;UBERON:0001007!1.93e-12!128;UBERON:0001555!1.93e-12!128;UBERON:0007026!1.93e-12!128;UBERON:0004921!1.06e-11!126;UBERON:0004185!1.06e-11!126;UBERON:0005911!4.64e-10!69;UBERON:0002405!1.88e-09!70;UBERON:0005057!5.75e-09!51;UBERON:0000344!6.14e-08!15;UBERON:0002530!9.31e-08!65;UBERON:0003408!9.39e-08!24;UBERON:0004923!1.35e-07!24;UBERON:0002370!1.43e-07!23;UBERON:0000974!1.43e-07!23;UBERON:0004807!1.43e-07!23;UBERON:0005058!1.43e-07!23;UBERON:0003351!1.43e-07!23;UBERON:0009113!1.43e-07!23;UBERON:0003295!1.43e-07!23;UBERON:0009722!1.43e-07!23;UBERON:0005562!1.43e-07!23;UBERON:0007690!1.43e-07!23;UBERON:0006562!2.49e-07!24;UBERON:0001557!2.49e-07!24;UBERON:0001042!2.49e-07!24;UBERON:0008814!2.49e-07!24;UBERON:0009145!2.49e-07!24;UBERON:0001242!3.59e-07!13;UBERON:0000060!3.59e-07!13;UBERON:0001262!3.59e-07!13;UBERON:0004786!3.59e-07!13;UBERON:0002193!3.87e-07!48;UBERON:0004177!4.78e-07!29 | |ontology_enrichment_uberon=UBERON:0003929!1.33e-13!55;UBERON:0000490!5.73e-13!66;UBERON:0004119!7.19e-13!130;UBERON:0000925!7.19e-13!130;UBERON:0006595!7.19e-13!130;UBERON:0001007!1.93e-12!128;UBERON:0001555!1.93e-12!128;UBERON:0007026!1.93e-12!128;UBERON:0004921!1.06e-11!126;UBERON:0004185!1.06e-11!126;UBERON:0005911!4.64e-10!69;UBERON:0002405!1.88e-09!70;UBERON:0005057!5.75e-09!51;UBERON:0000344!6.14e-08!15;UBERON:0002530!9.31e-08!65;UBERON:0003408!9.39e-08!24;UBERON:0004923!1.35e-07!24;UBERON:0002370!1.43e-07!23;UBERON:0000974!1.43e-07!23;UBERON:0004807!1.43e-07!23;UBERON:0005058!1.43e-07!23;UBERON:0003351!1.43e-07!23;UBERON:0009113!1.43e-07!23;UBERON:0003295!1.43e-07!23;UBERON:0009722!1.43e-07!23;UBERON:0005562!1.43e-07!23;UBERON:0007690!1.43e-07!23;UBERON:0006562!2.49e-07!24;UBERON:0001557!2.49e-07!24;UBERON:0001042!2.49e-07!24;UBERON:0008814!2.49e-07!24;UBERON:0009145!2.49e-07!24;UBERON:0001242!3.59e-07!13;UBERON:0000060!3.59e-07!13;UBERON:0001262!3.59e-07!13;UBERON:0004786!3.59e-07!13;UBERON:0002193!3.87e-07!48;UBERON:0004177!4.78e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.33e-13,55;UBERON:0004119,4.00e-13,118;UBERON:0000925,4.00e-13,118;UBERON:0006595,4.00e-13,118;UBERON:0000490,5.73e-13,66;UBERON:0001007,1.07e-12,116;UBERON:0001555,1.07e-12,116;UBERON:0007026,1.07e-12,116;UBERON:0004921,5.98e-12,114;UBERON:0005911,4.64e-10,69;UBERON:0000077,2.22e-08,35;UBERON:0000344,6.14e-08,15;UBERON:0002530,9.31e-08,65;UBERON:0003408,9.39e-08,24;UBERON:0000160,1.19e-07,31;UBERON:0004923,1.35e-07,24;UBERON:0002370,1.43e-07,23;UBERON:0000974,1.43e-07,23;UBERON:0004807,1.43e-07,23;UBERON:0005058,1.43e-07,23;UBERON:0003351,1.43e-07,23;UBERON:0009113,1.43e-07,23;UBERON:0003295,1.43e-07,23;UBERON:0009722,1.43e-07,23;UBERON:0005562,1.43e-07,23;UBERON:0007690,1.43e-07,23;UBERON:0006562,2.49e-07,24;UBERON:0001557,2.49e-07,24;UBERON:0001042,2.49e-07,24;UBERON:0008814,2.49e-07,24;UBERON:0009145,2.49e-07,24;UBERON:0001242,3.59e-07,13;UBERON:0001262,3.59e-07,13;UBERON:0004786,3.59e-07,13;UBERON:0002193,3.87e-07,48;UBERON:0002405,3.87e-07,48;UBERON:0004177,4.78e-07,29;UBERON:0005057,4.78e-07,29 | |||
|phase1_expression=10.089377367602,32.4547129104606,33.6699437148257,45.9745601186382,37.0662840160297,18.9703577260435,14.4839837169226,21.4344716913017,14.782815825925,12.8735489477096,17.635450727227,17.78919145596,21.7424927012631,22.5544638241013,10.3264026162855,14.1732687172878,13.9912375625629,22.7132759057931,21.3898516424952,23.7658205006897,13.8620562946244,16.1844250457443,14.8883879809193,15.8392498565473,15.1410125504332,23.5435105287158,27.9995297503399,16.3758136841276,13.8717096203153,13.1055667475164,18.4036323843903,10.1604907753541,20.2971379902908,31.6963362030877,12.7094712690561,12.1351291111699,15.7210404322024,21.7636447983192,26.5654017138092,12.0410461113974,22.9410280332096,24.589637458504,23.3044969454954,10.8271263458996,9.32667767219534,10.0950713688925,8.60630478782843,6.1047043786525,5.4921545683618,9.3326351555656,6.43937539476668,8.62515386189829,16.7782606057736,18.1340535502836,9.74672017513146,4.11615097657515,6.5902691185914,7.21940929188419,8.09265843438391,5.81890077199236,6.33831403506179,5.08266798103698,3.55717918444456,5.39939830368839,3.9554654502679,5.6838409195688,2.09720077362883,3.45796474789399,5.80661828927475,5.40023753326763,8.62332341540666,4.28476476605705,6.62605622854841,6.24703075996266,7.66763768145891,6.43453150627015,12.1127469099328,10.7257363991558,9.36999852863085,6.72620067423989,6.95306091378313,7.29278718779464,8.37548997004143,6.75315132038016,6.87592114995646,4.71405736757868,6.54909731675874,9.31997229126503,6.96680978665293,5.66786700800891,15.0729534124872,16.3480536626463,6.79971333707751,8.09554787456726,12.3457519315057,22.4013443548668,11.2355536105401,5.11290967734173,4.1565760736459,4.94675404314476,10.2815696436977,10.2661181931454,53.5091003383956,85.3280043783997,5.41227602528035,5.57391704045217,4.04419556011827,12.2176751299394,17.8667139716548,9.05497048295431,7.45986905094384,6.69824052286711,8.07154240396205,7.83757730873637,9.8774513993992,8.92232798440696,15.8204779349999,6.65157041831594,9.73071607144862,6.47067399789637,9.27534377533653,8.24287930329878,9.31958806090611,10.5401086924157,12.5668024088073,17.6265368093928,10.1842855830032,10.7982491578813,10.8009693012105,10.1857634795279,11.4375150704657,10.0523481690292,10.6032835317289,12.5300574091862,9.14267396062064,10.8701646255398,6.61955865027056,12.1918831197891,10.108910337347,13.8891624885073,8.06746746368763,5.51765050640335,7.02242306240862,8.59017461663576,9.93332887609387,7.68682321709099,9.65127762965207,12.4177617954728,6.25147179505242,5.48407632486676,10.381116325673,6.79506770525482,7.78532297831674,9.05455632957633,9.4659782747654,5.9710280045548,11.937624184325,12.610047448621,11.3665399758237,7.66365358381357,3.28336483973535,5.22179978236943,6.15536312521547,4.52557733019029,4.47374627373397,6.51095045301142,6.9751084363901,8.05680862333469,5.75959474697182,5.74586124276833,6.64764238276017,6.28659945928929,6.36695334344047,8.85762363818454,9.67333763394985,7.40913209130848,27.4247589876552,15.6025834331491,6.18535926552179,6.0381534683714,7.60318021800351,9.07575860805041,10.8965241483986,8.94060442729028,16.6085171540579,12.8465184684728,12.5667604400135,13.3300836267571,13.062593836981,21.5716658077013,12.3198688428576,16.3295844068581,4.74169752382704,6.62641373136427,5.63538678365402,7.94240178596726,9.11576689687841,10.1696938840962,9.35900749439008,9.15182917473533,7.84993639206874,11.105744752962,16.8977997439675,9.34332592010127,8.84515478009414,9.89393294493356,9.73728582664814,9.16473207059184,6.11102044275408,12.083237772934,18.159145398804,9.33508804839477,11.5014565221884,13.3970741160661,14.6657706363843,11.36604950762,14.1723956682311,13.5084185981743,10.1614254591633,7.20067364727842,6.51859905768104,5.60158783058121,6.33663670378956,7.03526281255626,10.2358765580986,12.8788207586147,8.51229778173431,7.52979944805835,7.81328366421687,10.9788420859544,8.11619414769709,9.54683786637976,13.5712155545345,8.70249094109935,18.6870423747234,17.1080782708934,8.50918126935297,10.6662634798905,5.57378814280696,8.83648245215305,8.83423014365519,7.02789739733949,5.60100834105277,7.64700153448166,8.91194696329577,10.190755108398,7.69140333182299,7.3063964477828,5.92931666919785,11.2462460747632,8.65834519770439,7.30068975035746,9.93610452056814,9.23832688646199,9.2921596837974,4.85561272309963,8.16273603804828,5.65815239267694,7.67784921490009,7.99331384654211,16.5394107627662,9.45187696641514,10.6949213515416,12.6414703174326,12.6502330289999,14.4389760547462,10.5536277783674,7.74262704334634,4.65691261617916,10.0738406464848,8.6896714484714,8.20496560969525,8.55654907131029,7.30715877875038,12.4376005273766,11.2270997557825,16.9806866502321,7.58476763530808,11.1410454420175,8.38349656501366,10.0272768962635,10.5050175836839,13.1166376483433,10.0129663085675,12.9861869406368,8.46186158649212,7.77817014952789,9.04168593622517,10.935538217682,11.2101304871196,15.298058699447,11.8958734475109,13.2671974852247,7.63736494412091,7.11755985557555,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| ||
|short_description=p1@Scyl3 | |short_description=p1@Scyl3 | ||
}} | }} |
Latest revision as of 16:42, 26 September 2015
Short description: | p1@Scyl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scyl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:775 |
Association with transcript: | 0bp_to_NM_028776, uc007dhq.1, uc007dhr.1_5end |
EntrezGene: | Scyl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 5.42e-07 | 25 |
hematopoietic cell | 6.26e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.26e-07 | 32 |
hematopoietic stem cell | 6.26e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.26e-07 | 32 |