FF:12725-135G7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005615 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008584;DRR009456;DRZ000881;DRZ002266;DRZ012231;DRZ013616 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002321,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000147,CL:0000710,CL:0000255,CL:0002077,CL:0000034,CL:0000148,CL:0002322 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101581,FF:0000350,FF:0000334,FF:0000380,FF:0000400,FF:0100669,FF:0000532 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|donor= biol_rep2 | |||
|fonse_cell_line=FF:0100669 | |fonse_cell_line=FF:0100669 | ||
|fonse_cell_line_closure=FF:0100669 | |fonse_cell_line_closure=FF:0100669 | ||
| Line 35: | Line 43: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000334,FF:0000532,FF:12725-135G7 | |fonse_treatment_closure=EFO:0000369,FF:0000334,FF:0000532,FF:12725-135G7 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep2%2520%2528H9EB-2%2520d0%2529.CNhs12825.12725-135G7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep2%2520%2528H9EB-2%2520d0%2529.CNhs12825.12725-135G7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep2%2520%2528H9EB-2%2520d0%2529.CNhs12825.12725-135G7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep2%2520%2528H9EB-2%2520d0%2529.CNhs12825.12725-135G7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep2%2520%2528H9EB-2%2520d0%2529.CNhs12825.12725-135G7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12725-135G7 | |id=FF:12725-135G7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000532 | ||
|name=H9 Embryoid body cells, melanocytic induction | |is_obsolete= | ||
|library_id=CNhs12825 | |||
|library_id_phase_based=2:CNhs12825 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12725 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12725 | |||
|name=H9 Embryoid body cells, melanocytic induction | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12825,LSID972,release012,COMPLETED | |profile_hcage=CNhs12825,LSID972,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=135 | |rna_box=135 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 55: | Line 78: | ||
|rna_sample_type= | |rna_sample_type= | ||
|rna_tube_id=135G7 | |rna_tube_id=135G7 | ||
|rna_weight_ug=7 | |rna_weight_ug=7 | ||
|sample_age= | |sample_age= | ||
|sample_category=time courses | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line=H9 | |sample_cell_line=H9 | ||
| Line 69: | Line 93: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition=Human ES cell differentiation to melanocyte | |sample_experimental_condition=Human ES cell differentiation to melanocyte | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.38534814864347e-287!GO:0043226;organelle;1.38870969449711e-232!GO:0043229;intracellular organelle;5.00579695460525e-232!GO:0043231;intracellular membrane-bound organelle;5.5846186097268e-227!GO:0043227;membrane-bound organelle;7.22068548808029e-227!GO:0005737;cytoplasm;1.86696347073265e-188!GO:0044422;organelle part;3.77597052357051e-149!GO:0044446;intracellular organelle part;1.26488699384054e-147!GO:0044444;cytoplasmic part;2.30449959499325e-119!GO:0005634;nucleus;3.79651216736118e-112!GO:0032991;macromolecular complex;7.07411721656611e-109!GO:0044238;primary metabolic process;3.96184434847219e-104!GO:0044237;cellular metabolic process;1.82077026887908e-102!GO:0043170;macromolecule metabolic process;2.12945110454015e-98!GO:0005515;protein binding;1.48182404834493e-95!GO:0030529;ribonucleoprotein complex;7.89248099893205e-91!GO:0044428;nuclear part;3.51319848222601e-83!GO:0003723;RNA binding;1.03206859828572e-80!GO:0043233;organelle lumen;2.26657289549598e-77!GO:0031974;membrane-enclosed lumen;2.26657289549598e-77!GO:0016043;cellular component organization and biogenesis;1.44383138070198e-65!GO:0043283;biopolymer metabolic process;3.06348442277898e-63!GO:0005739;mitochondrion;1.2140756304029e-62!GO:0010467;gene expression;4.3267610611278e-59!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.39503827188145e-58!GO:0043234;protein complex;2.77234465660547e-55!GO:0006396;RNA processing;5.23713952706939e-54!GO:0005840;ribosome;1.25282209924918e-51!GO:0031981;nuclear lumen;2.02920067830336e-49!GO:0006412;translation;4.14427403844139e-48!GO:0006996;organelle organization and biogenesis;1.38554447581503e-46!GO:0019538;protein metabolic process;3.17454329452733e-44!GO:0016071;mRNA metabolic process;9.77094592723979e-44!GO:0003735;structural constituent of ribosome;1.11215086897349e-43!GO:0043228;non-membrane-bound organelle;2.62195935702027e-43!GO:0043232;intracellular non-membrane-bound organelle;2.62195935702027e-43!GO:0044429;mitochondrial part;2.7887911359873e-42!GO:0031090;organelle membrane;1.5176503683185e-41!GO:0033036;macromolecule localization;2.49382156983029e-41!GO:0015031;protein transport;3.97082090402836e-41!GO:0008380;RNA splicing;6.29993940781519e-41!GO:0031967;organelle envelope;3.68117469577441e-40!GO:0031975;envelope;9.61877270946815e-40!GO:0033279;ribosomal subunit;3.60499682351187e-39!GO:0003676;nucleic acid binding;5.851488764918e-39!GO:0044249;cellular biosynthetic process;8.88580285907802e-39!GO:0044260;cellular macromolecule metabolic process;2.40043102020426e-38!GO:0044267;cellular protein metabolic process;3.87977187628966e-38!GO:0006397;mRNA processing;2.23688420813876e-37!GO:0065003;macromolecular complex assembly;2.90491578989297e-37!GO:0046907;intracellular transport;3.62491480519913e-37!GO:0008104;protein localization;5.48376817904316e-37!GO:0009058;biosynthetic process;5.62955871158754e-37!GO:0045184;establishment of protein localization;1.75418767445436e-36!GO:0006259;DNA metabolic process;2.45486095880291e-36!GO:0022607;cellular component assembly;5.96700828394342e-36!GO:0005829;cytosol;6.97006603047221e-36!GO:0009059;macromolecule biosynthetic process;5.1433043379301e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.07823372317386e-33!GO:0016070;RNA metabolic process;7.34187382037546e-32!GO:0005654;nucleoplasm;1.60199830051677e-30!GO:0007049;cell cycle;1.26576121029157e-29!GO:0005681;spliceosome;2.57846383632424e-29!GO:0006886;intracellular protein transport;1.58217662344459e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.375206081819e-28!GO:0019866;organelle inner membrane;2.45478551773894e-26!GO:0005740;mitochondrial envelope;3.05001036735532e-26!GO:0051649;establishment of cellular localization;4.47894318975856e-26!GO:0044451;nucleoplasm part;4.03247873351233e-25!GO:0051641;cellular localization;7.16500927789242e-25!GO:0031966;mitochondrial membrane;4.30129945712693e-24!GO:0005743;mitochondrial inner membrane;4.74593389106448e-24!GO:0044445;cytosolic part;5.50694271596573e-24!GO:0000166;nucleotide binding;1.36635833532592e-23!GO:0006119;oxidative phosphorylation;7.01190140126432e-23!GO:0005694;chromosome;1.54006776089291e-22!GO:0022402;cell cycle process;6.01176605430802e-22!GO:0000278;mitotic cell cycle;2.79108429892611e-21!GO:0044455;mitochondrial membrane part;9.36379442396463e-21!GO:0006974;response to DNA damage stimulus;9.53872885172957e-21!GO:0051276;chromosome organization and biogenesis;2.02368324416508e-20!GO:0044427;chromosomal part;4.30512616542729e-20!GO:0015935;small ribosomal subunit;4.31328893805091e-20!GO:0015934;large ribosomal subunit;4.4765796081215e-20!GO:0005730;nucleolus;1.67973958087378e-19!GO:0022618;protein-RNA complex assembly;2.93721572141351e-19!GO:0031980;mitochondrial lumen;3.13300703044077e-19!GO:0005759;mitochondrial matrix;3.13300703044077e-19!GO:0048770;pigment granule;6.22848292918194e-19!GO:0042470;melanosome;6.22848292918194e-19!GO:0016462;pyrophosphatase activity;6.34225473916212e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.06667478673362e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;1.47221134606463e-18!GO:0016874;ligase activity;2.6662725018374e-18!GO:0044265;cellular macromolecule catabolic process;2.95359538872876e-18!GO:0017111;nucleoside-triphosphatase activity;6.69486079270499e-18!GO:0008134;transcription factor binding;7.14615435770801e-18!GO:0006457;protein folding;7.57338679483998e-18!GO:0006512;ubiquitin cycle;8.25667990363927e-18!GO:0000087;M phase of mitotic cell cycle;1.45658569781607e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.41629169286064e-17!GO:0007067;mitosis;2.56360969271323e-17!GO:0022403;cell cycle phase;2.91280288885721e-17!GO:0019941;modification-dependent protein catabolic process;3.89254178471907e-17!GO:0043632;modification-dependent macromolecule catabolic process;3.89254178471907e-17!GO:0006511;ubiquitin-dependent protein catabolic process;7.1188033907157e-17!GO:0043285;biopolymer catabolic process;7.43134335941697e-17!GO:0044257;cellular protein catabolic process;7.8404594239132e-17!GO:0012505;endomembrane system;9.4745119336508e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;1.37797258859917e-16!GO:0005746;mitochondrial respiratory chain;2.98938187686155e-16!GO:0009057;macromolecule catabolic process;3.32566553687839e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.89770266873555e-16!GO:0003954;NADH dehydrogenase activity;4.89770266873555e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.89770266873555e-16!GO:0006323;DNA packaging;6.71199405764428e-16!GO:0051301;cell division;6.93961727478828e-16!GO:0006281;DNA repair;9.70272934365223e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.10145385456399e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.23299216036144e-15!GO:0032553;ribonucleotide binding;1.23299216036144e-15!GO:0032555;purine ribonucleotide binding;1.23299216036144e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;1.8944474294892e-15!GO:0000375;RNA splicing, via transesterification reactions;1.8944474294892e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.8944474294892e-15!GO:0005794;Golgi apparatus;2.67743016316425e-15!GO:0008135;translation factor activity, nucleic acid binding;2.97390398613117e-15!GO:0030163;protein catabolic process;3.23211357421388e-15!GO:0005761;mitochondrial ribosome;4.45430280596542e-15!GO:0000313;organellar ribosome;4.45430280596542e-15!GO:0006605;protein targeting;5.88144588576076e-15!GO:0050794;regulation of cellular process;6.04512686739095e-15!GO:0006260;DNA replication;6.47329680743908e-15!GO:0005635;nuclear envelope;7.06321344166517e-15!GO:0000279;M phase;9.71033267585562e-15!GO:0031965;nuclear membrane;1.1110073551324e-14!GO:0044248;cellular catabolic process;1.43926527821441e-14!GO:0042254;ribosome biogenesis and assembly;1.7285213578006e-14!GO:0017076;purine nucleotide binding;2.16906692612145e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.23873733770784e-14!GO:0051082;unfolded protein binding;3.76254271381783e-14!GO:0009719;response to endogenous stimulus;4.69229345115566e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.53970326661314e-14!GO:0042775;organelle ATP synthesis coupled electron transport;9.06011481269537e-14!GO:0042773;ATP synthesis coupled electron transport;9.06011481269537e-14!GO:0030964;NADH dehydrogenase complex (quinone);9.79078375011675e-14!GO:0045271;respiratory chain complex I;9.79078375011675e-14!GO:0005747;mitochondrial respiratory chain complex I;9.79078375011675e-14!GO:0044453;nuclear membrane part;1.73443048554135e-13!GO:0043412;biopolymer modification;1.87435380010146e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.31138644363962e-13!GO:0006366;transcription from RNA polymerase II promoter;6.59466689006497e-13!GO:0048193;Golgi vesicle transport;8.43263853485823e-13!GO:0016604;nuclear body;9.47026104569724e-13!GO:0005524;ATP binding;1.18925767023541e-12!GO:0005643;nuclear pore;1.66864451790903e-12!GO:0032559;adenyl ribonucleotide binding;2.98954692716931e-12!GO:0050789;regulation of biological process;3.06507550329459e-12!GO:0006913;nucleocytoplasmic transport;5.22651381306133e-12!GO:0015630;microtubule cytoskeleton;5.57684160824888e-12!GO:0006413;translational initiation;9.58266159084917e-12!GO:0005783;endoplasmic reticulum;1.23264639605859e-11!GO:0006464;protein modification process;1.23264639605859e-11!GO:0051186;cofactor metabolic process;1.23264639605859e-11!GO:0006446;regulation of translational initiation;1.53742779988494e-11!GO:0006403;RNA localization;1.53988920416677e-11!GO:0000785;chromatin;1.59728603849458e-11!GO:0051169;nuclear transport;1.79850767381043e-11!GO:0003743;translation initiation factor activity;2.43594140582909e-11!GO:0006461;protein complex assembly;2.61629055839878e-11!GO:0050657;nucleic acid transport;3.38529141605361e-11!GO:0051236;establishment of RNA localization;3.38529141605361e-11!GO:0050658;RNA transport;3.38529141605361e-11!GO:0003712;transcription cofactor activity;3.40714296036674e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.36478793908972e-11!GO:0043687;post-translational protein modification;4.67906345691993e-11!GO:0008565;protein transporter activity;5.25374980058869e-11!GO:0016192;vesicle-mediated transport;5.27903200206729e-11!GO:0030554;adenyl nucleotide binding;5.92869902084451e-11!GO:0016607;nuclear speck;1.28979898514971e-10!GO:0051726;regulation of cell cycle;1.37448959515093e-10!GO:0000074;regulation of progression through cell cycle;1.43231429648294e-10!GO:0065004;protein-DNA complex assembly;2.25617551649182e-10!GO:0004386;helicase activity;2.87145912334497e-10!GO:0019222;regulation of metabolic process;2.95877424877693e-10!GO:0006732;coenzyme metabolic process;3.04732567885429e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.07136509803734e-10!GO:0006333;chromatin assembly or disassembly;3.28013035642454e-10!GO:0065002;intracellular protein transport across a membrane;3.68814051776969e-10!GO:0006364;rRNA processing;4.43061050495932e-10!GO:0048523;negative regulation of cellular process;6.09465144893702e-10!GO:0006399;tRNA metabolic process;6.17069344027361e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.90558628022096e-10!GO:0016072;rRNA metabolic process;7.65032659335165e-10!GO:0030532;small nuclear ribonucleoprotein complex;1.02555671373503e-09!GO:0042623;ATPase activity, coupled;1.06870903705335e-09!GO:0012501;programmed cell death;1.26311348077422e-09!GO:0016887;ATPase activity;1.5816812341735e-09!GO:0016568;chromatin modification;2.28562033097447e-09!GO:0046930;pore complex;2.35213976151577e-09!GO:0051028;mRNA transport;2.48545630225782e-09!GO:0017038;protein import;2.53938092611586e-09!GO:0006915;apoptosis;2.7550068085169e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.81122166400408e-09!GO:0004812;aminoacyl-tRNA ligase activity;2.81122166400408e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.81122166400408e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.98481172020926e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.03510102984354e-09!GO:0008639;small protein conjugating enzyme activity;3.28748745812229e-09!GO:0009055;electron carrier activity;3.6447391298311e-09!GO:0009056;catabolic process;4.66319612210695e-09!GO:0004842;ubiquitin-protein ligase activity;5.86155751710809e-09!GO:0009259;ribonucleotide metabolic process;6.30966949231167e-09!GO:0006163;purine nucleotide metabolic process;6.36995112551678e-09!GO:0019787;small conjugating protein ligase activity;6.60964438715055e-09!GO:0043038;amino acid activation;8.19811603524372e-09!GO:0006418;tRNA aminoacylation for protein translation;8.19811603524372e-09!GO:0043039;tRNA aminoacylation;8.19811603524372e-09!GO:0048519;negative regulation of biological process;1.20775889781083e-08!GO:0006164;purine nucleotide biosynthetic process;1.23237427734328e-08!GO:0008026;ATP-dependent helicase activity;1.2611823961989e-08!GO:0044432;endoplasmic reticulum part;1.73491544288118e-08!GO:0003697;single-stranded DNA binding;1.80435329791279e-08!GO:0008219;cell death;1.86108809081275e-08!GO:0016265;death;1.86108809081275e-08!GO:0015986;ATP synthesis coupled proton transport;1.87040766571033e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.87040766571033e-08!GO:0031982;vesicle;1.94951392447635e-08!GO:0005793;ER-Golgi intermediate compartment;1.99101922494005e-08!GO:0031988;membrane-bound vesicle;2.05877891715034e-08!GO:0009260;ribonucleotide biosynthetic process;2.45701573177213e-08!GO:0016023;cytoplasmic membrane-bound vesicle;2.61500445603556e-08!GO:0031410;cytoplasmic vesicle;2.70516447500146e-08!GO:0007010;cytoskeleton organization and biogenesis;2.85013138694778e-08!GO:0006261;DNA-dependent DNA replication;3.5923501243437e-08!GO:0009150;purine ribonucleotide metabolic process;3.95427883809126e-08!GO:0043566;structure-specific DNA binding;6.02427034242094e-08!GO:0009060;aerobic respiration;6.59491577836196e-08!GO:0031497;chromatin assembly;7.24079414748669e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.42486392154705e-08!GO:0009152;purine ribonucleotide biosynthetic process;7.795802474772e-08!GO:0006334;nucleosome assembly;1.01041321290367e-07!GO:0045333;cellular respiration;1.12362660420453e-07!GO:0019829;cation-transporting ATPase activity;1.12491324584219e-07!GO:0016881;acid-amino acid ligase activity;1.3480102738803e-07!GO:0031323;regulation of cellular metabolic process;1.51380740323394e-07!GO:0006350;transcription;1.95482042504575e-07!GO:0003924;GTPase activity;2.26372464691787e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.3025008554115e-07!GO:0000775;chromosome, pericentric region;2.7113293430756e-07!GO:0043623;cellular protein complex assembly;3.14972404062704e-07!GO:0007005;mitochondrion organization and biogenesis;3.44188960955413e-07!GO:0000245;spliceosome assembly;3.47126145586196e-07!GO:0051246;regulation of protein metabolic process;3.64035718441939e-07!GO:0005819;spindle;4.57171241704338e-07!GO:0005667;transcription factor complex;4.94394151406554e-07!GO:0048475;coated membrane;5.03697613853528e-07!GO:0030117;membrane coat;5.03697613853528e-07!GO:0065007;biological regulation;5.24303087337645e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.75551546049491e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.75551546049491e-07!GO:0006888;ER to Golgi vesicle-mediated transport;6.02058897928351e-07!GO:0016740;transferase activity;6.91246708478777e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.03107678802077e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.91811193280473e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.87974888692451e-07!GO:0006754;ATP biosynthetic process;9.010091986809e-07!GO:0006753;nucleoside phosphate metabolic process;9.010091986809e-07!GO:0032446;protein modification by small protein conjugation;1.02274009595222e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.08806173506595e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.08806173506595e-06!GO:0009141;nucleoside triphosphate metabolic process;1.13865895078067e-06!GO:0010468;regulation of gene expression;1.13922016907361e-06!GO:0051188;cofactor biosynthetic process;1.20590057198304e-06!GO:0051170;nuclear import;1.22900069824674e-06!GO:0006099;tricarboxylic acid cycle;1.40759355387832e-06!GO:0046356;acetyl-CoA catabolic process;1.40759355387832e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.42419252843577e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.42419252843577e-06!GO:0031252;leading edge;1.62641638692602e-06!GO:0046034;ATP metabolic process;1.81631663317735e-06!GO:0031324;negative regulation of cellular metabolic process;1.86469894782397e-06!GO:0009117;nucleotide metabolic process;2.02674401159326e-06!GO:0016779;nucleotidyltransferase activity;2.05919598501297e-06!GO:0005874;microtubule;2.23353737460173e-06!GO:0016567;protein ubiquitination;2.24578839980889e-06!GO:0006793;phosphorus metabolic process;2.40009243613655e-06!GO:0006796;phosphate metabolic process;2.40009243613655e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.60336680070091e-06!GO:0043069;negative regulation of programmed cell death;3.02966356307521e-06!GO:0006606;protein import into nucleus;3.09896021259103e-06!GO:0005768;endosome;3.36096994180249e-06!GO:0007051;spindle organization and biogenesis;3.37870371885021e-06!GO:0042802;identical protein binding;3.42972219130164e-06!GO:0045259;proton-transporting ATP synthase complex;3.53711843503102e-06!GO:0006084;acetyl-CoA metabolic process;3.75136026527364e-06!GO:0043066;negative regulation of apoptosis;3.99564651256255e-06!GO:0030120;vesicle coat;4.35764713576115e-06!GO:0030662;coated vesicle membrane;4.35764713576115e-06!GO:0007017;microtubule-based process;4.57396346362567e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.78872838465734e-06!GO:0005657;replication fork;4.99579426301208e-06!GO:0003724;RNA helicase activity;5.46172495994615e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.82947667317102e-06!GO:0009892;negative regulation of metabolic process;5.91807344629406e-06!GO:0009108;coenzyme biosynthetic process;6.03453481871308e-06!GO:0005525;GTP binding;6.21034819198018e-06!GO:0003899;DNA-directed RNA polymerase activity;6.52774189706881e-06!GO:0006752;group transfer coenzyme metabolic process;6.91155222903564e-06!GO:0032774;RNA biosynthetic process;7.07567277839805e-06!GO:0044431;Golgi apparatus part;7.10788270763947e-06!GO:0006351;transcription, DNA-dependent;8.66722682772785e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.47298540230984e-06!GO:0005839;proteasome core complex (sensu Eukaryota);9.75070958852974e-06!GO:0005813;centrosome;1.09935815580525e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.28892685366955e-05!GO:0005789;endoplasmic reticulum membrane;1.30026958404639e-05!GO:0051329;interphase of mitotic cell cycle;1.36852386059227e-05!GO:0003713;transcription coactivator activity;1.36852386059227e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;1.39239544507685e-05!GO:0005762;mitochondrial large ribosomal subunit;1.53162508963883e-05!GO:0000315;organellar large ribosomal subunit;1.53162508963883e-05!GO:0006613;cotranslational protein targeting to membrane;1.71638848494562e-05!GO:0016564;transcription repressor activity;1.72235920807245e-05!GO:0051427;hormone receptor binding;1.72235920807245e-05!GO:0016853;isomerase activity;1.74766106350776e-05!GO:0048468;cell development;1.78381357738745e-05!GO:0009109;coenzyme catabolic process;2.12102021835564e-05!GO:0016563;transcription activator activity;2.18963126887447e-05!GO:0003682;chromatin binding;2.2170866932507e-05!GO:0006916;anti-apoptosis;2.24787485235238e-05!GO:0051325;interphase;2.3517154086536e-05!GO:0051187;cofactor catabolic process;2.59525497495928e-05!GO:0003714;transcription corepressor activity;2.71477528790016e-05!GO:0008094;DNA-dependent ATPase activity;2.80220125321621e-05!GO:0016481;negative regulation of transcription;2.82170857567809e-05!GO:0042981;regulation of apoptosis;2.98712689267462e-05!GO:0051168;nuclear export;3.10689176693485e-05!GO:0043067;regulation of programmed cell death;3.540053493876e-05!GO:0005815;microtubule organizing center;3.6710088350138e-05!GO:0035257;nuclear hormone receptor binding;3.7861127082776e-05!GO:0003729;mRNA binding;3.84750585250921e-05!GO:0000314;organellar small ribosomal subunit;3.84750585250921e-05!GO:0005763;mitochondrial small ribosomal subunit;3.84750585250921e-05!GO:0016310;phosphorylation;4.19368478594304e-05!GO:0032561;guanyl ribonucleotide binding;5.08658520131658e-05!GO:0019001;guanyl nucleotide binding;5.08658520131658e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;5.43732302938315e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.1376739169024e-05!GO:0000075;cell cycle checkpoint;6.2274531232409e-05!GO:0043021;ribonucleoprotein binding;6.53118233482455e-05!GO:0004298;threonine endopeptidase activity;6.54546046865416e-05!GO:0005798;Golgi-associated vesicle;7.00490087658089e-05!GO:0015631;tubulin binding;7.03013698368697e-05!GO:0045786;negative regulation of progression through cell cycle;7.45836175844222e-05!GO:0016363;nuclear matrix;8.28531082994706e-05!GO:0048471;perinuclear region of cytoplasm;8.71087749504982e-05!GO:0005770;late endosome;9.00981940365841e-05!GO:0000151;ubiquitin ligase complex;0.000106976109325292!GO:0005788;endoplasmic reticulum lumen;0.000111172789108046!GO:0008186;RNA-dependent ATPase activity;0.000116609010905979!GO:0045449;regulation of transcription;0.000131524172836252!GO:0008092;cytoskeletal protein binding;0.000139537765564457!GO:0000139;Golgi membrane;0.000144197336206215!GO:0030036;actin cytoskeleton organization and biogenesis;0.000154051072373243!GO:0000776;kinetochore;0.000165909929538847!GO:0044440;endosomal part;0.000172050599161755!GO:0010008;endosome membrane;0.000172050599161755!GO:0006383;transcription from RNA polymerase III promoter;0.000177700771576011!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000202889705590306!GO:0006612;protein targeting to membrane;0.00020793864981194!GO:0016859;cis-trans isomerase activity;0.00021514545992083!GO:0000059;protein import into nucleus, docking;0.00024080008874254!GO:0006402;mRNA catabolic process;0.00024239756556458!GO:0030867;rough endoplasmic reticulum membrane;0.000243214593058789!GO:0009165;nucleotide biosynthetic process;0.000259844269915332!GO:0005769;early endosome;0.000273754807783542!GO:0003690;double-stranded DNA binding;0.000283796224946503!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000286727415222792!GO:0003677;DNA binding;0.000288955477674625!GO:0007059;chromosome segregation;0.000300569812808033!GO:0006338;chromatin remodeling;0.000360796055330561!GO:0004004;ATP-dependent RNA helicase activity;0.000363605328958252!GO:0008654;phospholipid biosynthetic process;0.000442324517644761!GO:0006520;amino acid metabolic process;0.00045526572331367!GO:0015980;energy derivation by oxidation of organic compounds;0.000471193887503172!GO:0007264;small GTPase mediated signal transduction;0.000484029734119603!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000489075100318009!GO:0043414;biopolymer methylation;0.000489459859440985!GO:0051252;regulation of RNA metabolic process;0.000491802213801675!GO:0007093;mitotic cell cycle checkpoint;0.00049912923026102!GO:0008250;oligosaccharyl transferase complex;0.000517110663384328!GO:0006302;double-strand break repair;0.000517201101068336!GO:0045454;cell redox homeostasis;0.00052175998097514!GO:0005684;U2-dependent spliceosome;0.000581657252737668!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000589542977665279!GO:0051920;peroxiredoxin activity;0.000593781003608805!GO:0043681;protein import into mitochondrion;0.000598886757385985!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000607005692539563!GO:0006355;regulation of transcription, DNA-dependent;0.000608016894524455!GO:0005791;rough endoplasmic reticulum;0.000612585307683027!GO:0006414;translational elongation;0.000663963293736555!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000675900837486541!GO:0006401;RNA catabolic process;0.000703392628216404!GO:0007006;mitochondrial membrane organization and biogenesis;0.000721313644607883!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000773002882170902!GO:0044452;nucleolar part;0.000791450306606742!GO:0007088;regulation of mitosis;0.00082326571959286!GO:0048487;beta-tubulin binding;0.000832371255330844!GO:0032259;methylation;0.000857435895664256!GO:0030029;actin filament-based process;0.000859853619272097!GO:0045892;negative regulation of transcription, DNA-dependent;0.000873145916869464!GO:0045045;secretory pathway;0.000901252698808623!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00103790210807582!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00103790210807582!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00103790210807582!GO:0016741;transferase activity, transferring one-carbon groups;0.00105120801933064!GO:0030027;lamellipodium;0.00109343226272518!GO:0051052;regulation of DNA metabolic process;0.00109343226272518!GO:0004576;oligosaccharyl transferase activity;0.00110170477560425!GO:0051087;chaperone binding;0.00111423645793104!GO:0005048;signal sequence binding;0.00115608429021801!GO:0033116;ER-Golgi intermediate compartment membrane;0.00115848671237321!GO:0003684;damaged DNA binding;0.0011701520495404!GO:0043488;regulation of mRNA stability;0.00118196033560354!GO:0043487;regulation of RNA stability;0.00118196033560354!GO:0030880;RNA polymerase complex;0.00123845371131186!GO:0040029;regulation of gene expression, epigenetic;0.00131961236378742!GO:0008168;methyltransferase activity;0.00149819310598034!GO:0030118;clathrin coat;0.00153175379309724!GO:0032508;DNA duplex unwinding;0.00153175379309724!GO:0032392;DNA geometric change;0.00153175379309724!GO:0045893;positive regulation of transcription, DNA-dependent;0.00156038244379583!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0015935933913946!GO:0001726;ruffle;0.00162349705373234!GO:0006730;one-carbon compound metabolic process;0.00163873065038692!GO:0005885;Arp2/3 protein complex;0.00167378686373233!GO:0000786;nucleosome;0.00167675402715691!GO:0031124;mRNA 3'-end processing;0.00169611954206223!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0016967995559945!GO:0006839;mitochondrial transport;0.00172757600250965!GO:0016272;prefoldin complex;0.00193213533889122!GO:0006405;RNA export from nucleus;0.00201110009869658!GO:0007052;mitotic spindle organization and biogenesis;0.00212024918211208!GO:0006541;glutamine metabolic process;0.00214187061791668!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00218354144733487!GO:0051789;response to protein stimulus;0.00220159016004859!GO:0006986;response to unfolded protein;0.00220159016004859!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00252129884560131!GO:0008361;regulation of cell size;0.00252138234242488!GO:0048500;signal recognition particle;0.00253427771681614!GO:0019899;enzyme binding;0.00253607127847126!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00256034877034402!GO:0006352;transcription initiation;0.00256656983908965!GO:0006519;amino acid and derivative metabolic process;0.00269258169648746!GO:0006144;purine base metabolic process;0.00270334685778198!GO:0044262;cellular carbohydrate metabolic process;0.00270334685778198!GO:0005637;nuclear inner membrane;0.00271681904470408!GO:0030133;transport vesicle;0.00281035041328848!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00283831528316969!GO:0045941;positive regulation of transcription;0.00287163239699967!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00287515309271085!GO:0000428;DNA-directed RNA polymerase complex;0.00287515309271085!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00291856545922081!GO:0003678;DNA helicase activity;0.00293109161462627!GO:0030658;transport vesicle membrane;0.00299180213376248!GO:0008287;protein serine/threonine phosphatase complex;0.00315875692965853!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00321618998322484!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00327816662002324!GO:0018196;peptidyl-asparagine modification;0.00329891741841551!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00329891741841551!GO:0006268;DNA unwinding during replication;0.00331674579053769!GO:0000902;cell morphogenesis;0.00355752910622057!GO:0032989;cellular structure morphogenesis;0.00355752910622057!GO:0009112;nucleobase metabolic process;0.00359206274568171!GO:0008022;protein C-terminus binding;0.00359206274568171!GO:0006611;protein export from nucleus;0.00359206274568171!GO:0000159;protein phosphatase type 2A complex;0.00359559899790024!GO:0035258;steroid hormone receptor binding;0.00365072233019841!GO:0000792;heterochromatin;0.00366647584613055!GO:0006891;intra-Golgi vesicle-mediated transport;0.0036696941016338!GO:0031072;heat shock protein binding;0.00381640229159902!GO:0009116;nucleoside metabolic process;0.00383271096534402!GO:0019843;rRNA binding;0.00394404026271063!GO:0016049;cell growth;0.00395959976471679!GO:0005876;spindle microtubule;0.00396536268456139!GO:0005905;coated pit;0.0039883975294936!GO:0006378;mRNA polyadenylation;0.00401278324090194!GO:0008139;nuclear localization sequence binding;0.00401278324090194!GO:0046474;glycerophospholipid biosynthetic process;0.00436363378690369!GO:0030134;ER to Golgi transport vesicle;0.00476291603126692!GO:0000228;nuclear chromosome;0.00488422988671543!GO:0008017;microtubule binding;0.00488636105523579!GO:0006595;polyamine metabolic process;0.00501678469076946!GO:0016126;sterol biosynthetic process;0.00501723673971859!GO:0006007;glucose catabolic process;0.00515969476245901!GO:0004527;exonuclease activity;0.00520104044977284!GO:0000209;protein polyubiquitination;0.00530429974459706!GO:0008312;7S RNA binding;0.00538464586853847!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00538464586853847!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00538464586853847!GO:0003711;transcription elongation regulator activity;0.00540117062103155!GO:0016584;nucleosome positioning;0.00548883306979772!GO:0008033;tRNA processing;0.00553217543368697!GO:0008601;protein phosphatase type 2A regulator activity;0.00559519727441068!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00559519727441068!GO:0030521;androgen receptor signaling pathway;0.00561480513156036!GO:0005741;mitochondrial outer membrane;0.0056970521713954!GO:0051101;regulation of DNA binding;0.0056970521713954!GO:0003702;RNA polymerase II transcription factor activity;0.00572127168850714!GO:0030119;AP-type membrane coat adaptor complex;0.00586610798853645!GO:0030659;cytoplasmic vesicle membrane;0.00592362756232019!GO:0003746;translation elongation factor activity;0.00615103316676445!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.006197730592114!GO:0045047;protein targeting to ER;0.006197730592114!GO:0006650;glycerophospholipid metabolic process;0.0063094553201553!GO:0016251;general RNA polymerase II transcription factor activity;0.00655175484805763!GO:0006284;base-excision repair;0.00670936696912014!GO:0032200;telomere organization and biogenesis;0.00688020344344936!GO:0000723;telomere maintenance;0.00688020344344936!GO:0030663;COPI coated vesicle membrane;0.0070107252513859!GO:0030126;COPI vesicle coat;0.0070107252513859!GO:0006310;DNA recombination;0.00722253752899495!GO:0006626;protein targeting to mitochondrion;0.00750207352606656!GO:0000049;tRNA binding;0.00760820919778313!GO:0030660;Golgi-associated vesicle membrane;0.0076117271837413!GO:0031968;organelle outer membrane;0.00761872688037225!GO:0042770;DNA damage response, signal transduction;0.00764123686039633!GO:0044433;cytoplasmic vesicle part;0.00768938261885458!GO:0006270;DNA replication initiation;0.00773279649133998!GO:0012506;vesicle membrane;0.00826673387506404!GO:0005773;vacuole;0.00862579701442334!GO:0030131;clathrin adaptor complex;0.00895142567282028!GO:0005758;mitochondrial intermembrane space;0.00920236211345343!GO:0051287;NAD binding;0.00920236211345343!GO:0043596;nuclear replication fork;0.00943215426575612!GO:0030127;COPII vesicle coat;0.00943772305537626!GO:0012507;ER to Golgi transport vesicle membrane;0.00943772305537626!GO:0008180;signalosome;0.00953129906616218!GO:0005832;chaperonin-containing T-complex;0.0096690072246835!GO:0007050;cell cycle arrest;0.00968499149776275!GO:0001558;regulation of cell growth;0.00977040650422858!GO:0043022;ribosome binding;0.00983320422362982!GO:0005938;cell cortex;0.00984385111031408!GO:0031970;organelle envelope lumen;0.00986483443456504!GO:0019867;outer membrane;0.0100296685846835!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0100918607312396!GO:0016787;hydrolase activity;0.0105052706969307!GO:0000096;sulfur amino acid metabolic process;0.0106291637743664!GO:0000339;RNA cap binding;0.011004619368039!GO:0042393;histone binding;0.011004619368039!GO:0008637;apoptotic mitochondrial changes;0.0111312705691102!GO:0005669;transcription factor TFIID complex;0.0111951262124956!GO:0043284;biopolymer biosynthetic process;0.0113773865859801!GO:0016311;dephosphorylation;0.0120191320169045!GO:0008652;amino acid biosynthetic process;0.0120631901744424!GO:0007004;telomere maintenance via telomerase;0.0120631901744424!GO:0046983;protein dimerization activity;0.0121958659222271!GO:0000781;chromosome, telomeric region;0.0122815680369581!GO:0000922;spindle pole;0.0125880984937019!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0128170892567549!GO:0017166;vinculin binding;0.0130977579634135!GO:0000178;exosome (RNase complex);0.0132853421219299!GO:0051098;regulation of binding;0.0133088715013304!GO:0031123;RNA 3'-end processing;0.0138703785537884!GO:0016044;membrane organization and biogenesis;0.0143386948845122!GO:0005875;microtubule associated complex;0.0148274061692157!GO:0030137;COPI-coated vesicle;0.0151400190786628!GO:0008213;protein amino acid alkylation;0.0155864243824301!GO:0006479;protein amino acid methylation;0.0155864243824301!GO:0016585;chromatin remodeling complex;0.0156357502329453!GO:0006275;regulation of DNA replication;0.0157098577941718!GO:0008629;induction of apoptosis by intracellular signals;0.0158270338932261!GO:0006376;mRNA splice site selection;0.0158435064400737!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0158435064400737!GO:0051128;regulation of cellular component organization and biogenesis;0.0159288061278419!GO:0051539;4 iron, 4 sulfur cluster binding;0.0165105826438592!GO:0009303;rRNA transcription;0.0167535506270309!GO:0007021;tubulin folding;0.0172857743500827!GO:0008276;protein methyltransferase activity;0.0175465621496886!GO:0005862;muscle thin filament tropomyosin;0.0175465621496886!GO:0006695;cholesterol biosynthetic process;0.017714183036395!GO:0046483;heterocycle metabolic process;0.0179126108759576!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0182814130648008!GO:0015002;heme-copper terminal oxidase activity;0.0182814130648008!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0182814130648008!GO:0004129;cytochrome-c oxidase activity;0.0182814130648008!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0187297640584853!GO:0044454;nuclear chromosome part;0.0190181443275816!GO:0008632;apoptotic program;0.0193173022936313!GO:0050178;phenylpyruvate tautomerase activity;0.0193472329263604!GO:0004674;protein serine/threonine kinase activity;0.0194475965907067!GO:0019752;carboxylic acid metabolic process;0.0194544941616935!GO:0006289;nucleotide-excision repair;0.0200807398535676!GO:0065009;regulation of a molecular function;0.0201399705226434!GO:0051540;metal cluster binding;0.0203095244162297!GO:0051536;iron-sulfur cluster binding;0.0203095244162297!GO:0005996;monosaccharide metabolic process;0.0210990213405164!GO:0051348;negative regulation of transferase activity;0.0218416299801009!GO:0030496;midbody;0.022055809576157!GO:0031902;late endosome membrane;0.02228475013109!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0225308519662566!GO:0006082;organic acid metabolic process;0.0225308519662566!GO:0033673;negative regulation of kinase activity;0.0226428330625182!GO:0006469;negative regulation of protein kinase activity;0.0226428330625182!GO:0000082;G1/S transition of mitotic cell cycle;0.023039040536793!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0232425670731621!GO:0001725;stress fiber;0.0235009074928093!GO:0032432;actin filament bundle;0.0235009074928093!GO:0005869;dynactin complex;0.0236382902872489!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.02374390069291!GO:0031577;spindle checkpoint;0.0239159915013266!GO:0046489;phosphoinositide biosynthetic process;0.0239878829893068!GO:0016197;endosome transport;0.0244803119397879!GO:0046467;membrane lipid biosynthetic process;0.0246918130859378!GO:0030176;integral to endoplasmic reticulum membrane;0.02470466071246!GO:0030518;steroid hormone receptor signaling pathway;0.0250875533605948!GO:0019318;hexose metabolic process;0.0253385130040264!GO:0004532;exoribonuclease activity;0.0253385130040264!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0253385130040264!GO:0009308;amine metabolic process;0.0253676883914678!GO:0000725;recombinational repair;0.0254450042057741!GO:0000724;double-strand break repair via homologous recombination;0.0254450042057741!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0255715930300621!GO:0010257;NADH dehydrogenase complex assembly;0.0255715930300621!GO:0033108;mitochondrial respiratory chain complex assembly;0.0255715930300621!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0255715930300621!GO:0019783;small conjugating protein-specific protease activity;0.0263039243014366!GO:0000097;sulfur amino acid biosynthetic process;0.0272901647217779!GO:0016791;phosphoric monoester hydrolase activity;0.0279979209094862!GO:0043631;RNA polyadenylation;0.0280393608226997!GO:0043086;negative regulation of catalytic activity;0.0280880366916969!GO:0043601;nuclear replisome;0.0281176418735436!GO:0030894;replisome;0.0281176418735436!GO:0000118;histone deacetylase complex;0.028711274354851!GO:0019904;protein domain specific binding;0.0288121408782995!GO:0006278;RNA-dependent DNA replication;0.0302705675563611!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0305134557100187!GO:0006417;regulation of translation;0.0307364301107953!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0307365424718538!GO:0006790;sulfur metabolic process;0.0307365424718538!GO:0005652;nuclear lamina;0.0308269011625159!GO:0006096;glycolysis;0.0315382160646815!GO:0006607;NLS-bearing substrate import into nucleus;0.0315963991525481!GO:0030384;phosphoinositide metabolic process;0.0319819070964572!GO:0051656;establishment of organelle localization;0.0321173058815759!GO:0005663;DNA replication factor C complex;0.0322722312577006!GO:0022890;inorganic cation transmembrane transporter activity;0.0326658670966913!GO:0008320;protein transmembrane transporter activity;0.0329248905517938!GO:0006740;NADPH regeneration;0.0330915150845555!GO:0006098;pentose-phosphate shunt;0.0330915150845555!GO:0005784;translocon complex;0.0332484652698892!GO:0031570;DNA integrity checkpoint;0.0333155595171349!GO:0000123;histone acetyltransferase complex;0.0337358578878191!GO:0031625;ubiquitin protein ligase binding;0.0342755820026636!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0342836023353879!GO:0035267;NuA4 histone acetyltransferase complex;0.0349156395226535!GO:0048522;positive regulation of cellular process;0.0349583781120237!GO:0031371;ubiquitin conjugating enzyme complex;0.0350898418763787!GO:0042026;protein refolding;0.0354893903366605!GO:0001836;release of cytochrome c from mitochondria;0.0355036919437224!GO:0015992;proton transport;0.0361999076510603!GO:0008538;proteasome activator activity;0.0368161402016857!GO:0004843;ubiquitin-specific protease activity;0.0369021887480225!GO:0006979;response to oxidative stress;0.0369798543036264!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.037094283082235!GO:0046365;monosaccharide catabolic process;0.0377989526642215!GO:0006818;hydrogen transport;0.0391565077899984!GO:0046426;negative regulation of JAK-STAT cascade;0.0392817296406773!GO:0006984;ER-nuclear signaling pathway;0.0394280093126832!GO:0046966;thyroid hormone receptor binding;0.0394601218196699!GO:0006470;protein amino acid dephosphorylation;0.0395706029865541!GO:0044450;microtubule organizing center part;0.0396072293797353!GO:0008097;5S rRNA binding;0.039884481470532!GO:0006892;post-Golgi vesicle-mediated transport;0.0401120292973914!GO:0017134;fibroblast growth factor binding;0.0402199681640915!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0405738806979716!GO:0004680;casein kinase activity;0.0411065834188531!GO:0004722;protein serine/threonine phosphatase activity;0.0412173176293844!GO:0004448;isocitrate dehydrogenase activity;0.0415303624983727!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0416371505151439!GO:0004003;ATP-dependent DNA helicase activity;0.0417893253575598!GO:0000910;cytokinesis;0.0422317279083215!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0424888232408273!GO:0055083;monovalent inorganic anion homeostasis;0.0424888232408273!GO:0055064;chloride ion homeostasis;0.0424888232408273!GO:0030644;cellular chloride ion homeostasis;0.0424888232408273!GO:0032940;secretion by cell;0.0427740956685157!GO:0000070;mitotic sister chromatid segregation;0.0430559789508121!GO:0043189;H4/H2A histone acetyltransferase complex;0.0440667887467386!GO:0006807;nitrogen compound metabolic process;0.0441277820329636!GO:0004221;ubiquitin thiolesterase activity;0.0448497426202543!GO:0050750;low-density lipoprotein receptor binding;0.0448932852762078!GO:0050681;androgen receptor binding;0.0449663324295601!GO:0000819;sister chromatid segregation;0.0451348775196896!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0454376969270713!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0454376969270713!GO:0042769;DNA damage response, detection of DNA damage;0.0467933688081175!GO:0043624;cellular protein complex disassembly;0.0475016738091902!GO:0016407;acetyltransferase activity;0.0478503268462925!GO:0045947;negative regulation of translational initiation;0.0487490873562923!GO:0016491;oxidoreductase activity;0.0487594867790292!GO:0008143;poly(A) binding;0.0488373983302355!GO:0050749;apolipoprotein E receptor binding;0.0488373983302355!GO:0004518;nuclease activity;0.0489056716312811!GO:0004721;phosphoprotein phosphatase activity;0.0493890502729922!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0495225394142391!GO:0015399;primary active transmembrane transporter activity;0.0495225394142391!GO:0006220;pyrimidine nucleotide metabolic process;0.0499558154325254 | |||
|sample_id=12725 | |sample_id=12725 | ||
|sample_note= | |sample_note= | ||
| Line 75: | Line 100: | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=unclassifiable | |sample_tissue=unclassifiable | ||
|time= day00 | |||
|timecourse=Embryoid_body_to_melanocyte | |||
|top_motifs=PATZ1:2.56520082329;OCT4_SOX2{dimer}:2.4471168744;SP1:2.28766910903;VSX1,2:2.17524626892;PBX1:2.04405114487;GFI1:1.96151656644;XCPE1{core}:1.7270850977;SOX{8,9,10}:1.72532822506;MAZ:1.67560568867;MZF1:1.66070812235;RBPJ:1.58652599548;TFDP1:1.57056117357;NFY{A,B,C}:1.51618495295;SOX17:1.45591330889;ZNF384:1.45448847852;RREB1:1.42141124048;TBP:1.41948620373;SOX2:1.38244925625;POU5F1:1.36900163248;NKX2-3_NKX2-5:1.35561234624;ZIC1..3:1.3539284457;NANOG:1.3483058199;T:1.26357962684;SNAI1..3:1.13683242652;PAX1,9:1.11802783919;CUX2:1.0940646272;E2F1..5:1.08046327609;FOXM1:1.06656115516;POU2F1..3:1.01003780606;LEF1_TCF7_TCF7L1,2:0.968721617897;ZNF143:0.966418540632;ONECUT1,2:0.953237817663;MYOD1:0.928699801259;CDC5L:0.903400351613;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.863338323846;EBF1:0.823239342299;KLF4:0.817394603625;NRF1:0.811513576283;ZEB1:0.802254916902;TP53:0.769685834705;TOPORS:0.766042105925;GTF2I:0.750418100081;LMO2:0.709459971796;ZFP161:0.696591129105;STAT1,3:0.659004258372;EGR1..3:0.649288641795;ZBTB6:0.630295576359;TBX4,5:0.627031868031;ADNP_IRX_SIX_ZHX:0.59821935612;PRDM1:0.578863537173;HNF4A_NR2F1,2:0.572220477782;ESRRA:0.567307633805;EVI1:0.557929411736;HIC1:0.556689745668;NKX2-1,4:0.551390697363;PAX5:0.54915569122;TFAP2B:0.539178916858;MTF1:0.53322117609;POU3F1..4:0.530597610445;BREu{core}:0.529871008329;AIRE:0.495819652476;ATF4:0.48980090532;ALX1:0.468207269279;GCM1,2:0.45106790449;JUN:0.4470290726;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.43826676779;HOX{A6,A7,B6,B7}:0.405337426124;MED-1{core}:0.403904901074;CRX:0.391842703897;ELK1,4_GABP{A,B1}:0.391147995459;HIF1A:0.388859009551;UFEwm:0.364678650175;RFX1:0.342722870796;SREBF1,2:0.328640881617;IKZF2:0.321264001109;YY1:0.304998005335;GATA4:0.296700350299;NHLH1,2:0.28891290321;PRRX1,2:0.281881476647;REST:0.279296014228;HNF1A:0.277626891434;HOX{A4,D4}:0.264238450359;MTE{core}:0.257926036575;ATF2:0.22521110554;DBP:0.223160151477;GTF2A1,2:0.219888187467;RORA:0.199770135887;CDX1,2,4:0.14974162154;ZNF148:0.146412127055;bHLH_family:0.142361290475;MYFfamily:0.124264806705;XBP1:0.0804776936857;HMX1:0.0693729156835;NR1H4:0.051780516404;TFCP2:0.0498015384786;MYB:0.042383687044;FOXN1:0.0179316652804;STAT5{A,B}:-0.0232090110437;PAX2:-0.0233114878763;EN1,2:-0.0335224861182;HOX{A5,B5}:-0.0380758991212;HAND1,2:-0.0436491330638;RXR{A,B,G}:-0.0467754413825;FOX{I1,J2}:-0.0782257291091;HSF1,2:-0.0990659241223;POU6F1:-0.107068249551;GFI1B:-0.114511235803;TFAP2{A,C}:-0.132653828953;TEAD1:-0.136692782092;LHX3,4:-0.139172117055;FOXD3:-0.141856437236;ZNF423:-0.14708767062;NFE2L2:-0.16477295389;SOX5:-0.191858665159;AHR_ARNT_ARNT2:-0.200508903739;SRF:-0.208451418657;CREB1:-0.216741652751;ZBTB16:-0.225115823616;IKZF1:-0.230909236316;ATF6:-0.243121129204;NFE2L1:-0.257815470949;MYBL2:-0.262558014731;GATA6:-0.266309747249;NANOG{mouse}:-0.289325414045;NFKB1_REL_RELA:-0.322660702246;FOXA2:-0.3276134221;PAX8:-0.335495145307;NKX3-2:-0.338834710265;MEF2{A,B,C,D}:-0.34248651242;FOXQ1:-0.35993051819;ARID5B:-0.360571766468;RXRA_VDR{dimer}:-0.375382864377;ESR1:-0.386963921442;ATF5_CREB3:-0.390167218051;NKX6-1,2:-0.395315669429;TFAP4:-0.399836684132;RFX2..5_RFXANK_RFXAP:-0.425471591424;FOSL2:-0.441778210134;BACH2:-0.45800247797;PAX3,7:-0.460528233181;PPARG:-0.467147719288;FOXO1,3,4:-0.468753570423;NFE2:-0.474856468665;ALX4:-0.481858213259;BPTF:-0.48846522628;FOS_FOS{B,L1}_JUN{B,D}:-0.536761626757;FOXP1:-0.538041756338;SPI1:-0.567639049778;TLX2:-0.585494494143;NKX3-1:-0.592297191536;FOX{F1,F2,J1}:-0.622380213164;NR3C1:-0.622452730029;PITX1..3:-0.636035571483;TEF:-0.649051063559;PAX4:-0.656468873216;FOXP3:-0.682508671888;FOX{D1,D2}:-0.684469215888;NFIX:-0.692252177544;PDX1:-0.728195990066;HLF:-0.728253240045;ZNF238:-0.740917872922;NR5A1,2:-0.751612455168;HBP1_HMGB_SSRP1_UBTF:-0.780541010819;RUNX1..3:-0.794354021614;TGIF1:-0.799255649328;FOXL1:-0.806687693576;POU1F1:-0.809408733589;SPIB:-0.816718583721;CEBPA,B_DDIT3:-0.82376137815;EP300:-0.826352663826;IRF7:-0.837248854195;TLX1..3_NFIC{dimer}:-0.858253711171;TAL1_TCF{3,4,12}:-0.85919431233;SMAD1..7,9:-0.873867712222;ELF1,2,4:-0.885202272091;ETS1,2:-0.913907335417;NFATC1..3:-0.946541144349;PAX6:-0.950320161066;SPZ1:-1.01174822966;IRF1,2:-1.01829619122;AR:-1.04797242708;HMGA1,2:-1.04849220149;GZF1:-1.06585047496;DMAP1_NCOR{1,2}_SMARC:-1.07145296438;MAFB:-1.08298625986;NKX2-2,8:-1.14409037141;GLI1..3:-1.24735316928;HES1:-1.28056277259;NR6A1:-1.29847990773;NFIL3:-1.30119085012;HOXA9_MEIS1:-1.35328346479;STAT2,4,6:-1.41351912383 | |top_motifs=PATZ1:2.56520082329;OCT4_SOX2{dimer}:2.4471168744;SP1:2.28766910903;VSX1,2:2.17524626892;PBX1:2.04405114487;GFI1:1.96151656644;XCPE1{core}:1.7270850977;SOX{8,9,10}:1.72532822506;MAZ:1.67560568867;MZF1:1.66070812235;RBPJ:1.58652599548;TFDP1:1.57056117357;NFY{A,B,C}:1.51618495295;SOX17:1.45591330889;ZNF384:1.45448847852;RREB1:1.42141124048;TBP:1.41948620373;SOX2:1.38244925625;POU5F1:1.36900163248;NKX2-3_NKX2-5:1.35561234624;ZIC1..3:1.3539284457;NANOG:1.3483058199;T:1.26357962684;SNAI1..3:1.13683242652;PAX1,9:1.11802783919;CUX2:1.0940646272;E2F1..5:1.08046327609;FOXM1:1.06656115516;POU2F1..3:1.01003780606;LEF1_TCF7_TCF7L1,2:0.968721617897;ZNF143:0.966418540632;ONECUT1,2:0.953237817663;MYOD1:0.928699801259;CDC5L:0.903400351613;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.863338323846;EBF1:0.823239342299;KLF4:0.817394603625;NRF1:0.811513576283;ZEB1:0.802254916902;TP53:0.769685834705;TOPORS:0.766042105925;GTF2I:0.750418100081;LMO2:0.709459971796;ZFP161:0.696591129105;STAT1,3:0.659004258372;EGR1..3:0.649288641795;ZBTB6:0.630295576359;TBX4,5:0.627031868031;ADNP_IRX_SIX_ZHX:0.59821935612;PRDM1:0.578863537173;HNF4A_NR2F1,2:0.572220477782;ESRRA:0.567307633805;EVI1:0.557929411736;HIC1:0.556689745668;NKX2-1,4:0.551390697363;PAX5:0.54915569122;TFAP2B:0.539178916858;MTF1:0.53322117609;POU3F1..4:0.530597610445;BREu{core}:0.529871008329;AIRE:0.495819652476;ATF4:0.48980090532;ALX1:0.468207269279;GCM1,2:0.45106790449;JUN:0.4470290726;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.43826676779;HOX{A6,A7,B6,B7}:0.405337426124;MED-1{core}:0.403904901074;CRX:0.391842703897;ELK1,4_GABP{A,B1}:0.391147995459;HIF1A:0.388859009551;UFEwm:0.364678650175;RFX1:0.342722870796;SREBF1,2:0.328640881617;IKZF2:0.321264001109;YY1:0.304998005335;GATA4:0.296700350299;NHLH1,2:0.28891290321;PRRX1,2:0.281881476647;REST:0.279296014228;HNF1A:0.277626891434;HOX{A4,D4}:0.264238450359;MTE{core}:0.257926036575;ATF2:0.22521110554;DBP:0.223160151477;GTF2A1,2:0.219888187467;RORA:0.199770135887;CDX1,2,4:0.14974162154;ZNF148:0.146412127055;bHLH_family:0.142361290475;MYFfamily:0.124264806705;XBP1:0.0804776936857;HMX1:0.0693729156835;NR1H4:0.051780516404;TFCP2:0.0498015384786;MYB:0.042383687044;FOXN1:0.0179316652804;STAT5{A,B}:-0.0232090110437;PAX2:-0.0233114878763;EN1,2:-0.0335224861182;HOX{A5,B5}:-0.0380758991212;HAND1,2:-0.0436491330638;RXR{A,B,G}:-0.0467754413825;FOX{I1,J2}:-0.0782257291091;HSF1,2:-0.0990659241223;POU6F1:-0.107068249551;GFI1B:-0.114511235803;TFAP2{A,C}:-0.132653828953;TEAD1:-0.136692782092;LHX3,4:-0.139172117055;FOXD3:-0.141856437236;ZNF423:-0.14708767062;NFE2L2:-0.16477295389;SOX5:-0.191858665159;AHR_ARNT_ARNT2:-0.200508903739;SRF:-0.208451418657;CREB1:-0.216741652751;ZBTB16:-0.225115823616;IKZF1:-0.230909236316;ATF6:-0.243121129204;NFE2L1:-0.257815470949;MYBL2:-0.262558014731;GATA6:-0.266309747249;NANOG{mouse}:-0.289325414045;NFKB1_REL_RELA:-0.322660702246;FOXA2:-0.3276134221;PAX8:-0.335495145307;NKX3-2:-0.338834710265;MEF2{A,B,C,D}:-0.34248651242;FOXQ1:-0.35993051819;ARID5B:-0.360571766468;RXRA_VDR{dimer}:-0.375382864377;ESR1:-0.386963921442;ATF5_CREB3:-0.390167218051;NKX6-1,2:-0.395315669429;TFAP4:-0.399836684132;RFX2..5_RFXANK_RFXAP:-0.425471591424;FOSL2:-0.441778210134;BACH2:-0.45800247797;PAX3,7:-0.460528233181;PPARG:-0.467147719288;FOXO1,3,4:-0.468753570423;NFE2:-0.474856468665;ALX4:-0.481858213259;BPTF:-0.48846522628;FOS_FOS{B,L1}_JUN{B,D}:-0.536761626757;FOXP1:-0.538041756338;SPI1:-0.567639049778;TLX2:-0.585494494143;NKX3-1:-0.592297191536;FOX{F1,F2,J1}:-0.622380213164;NR3C1:-0.622452730029;PITX1..3:-0.636035571483;TEF:-0.649051063559;PAX4:-0.656468873216;FOXP3:-0.682508671888;FOX{D1,D2}:-0.684469215888;NFIX:-0.692252177544;PDX1:-0.728195990066;HLF:-0.728253240045;ZNF238:-0.740917872922;NR5A1,2:-0.751612455168;HBP1_HMGB_SSRP1_UBTF:-0.780541010819;RUNX1..3:-0.794354021614;TGIF1:-0.799255649328;FOXL1:-0.806687693576;POU1F1:-0.809408733589;SPIB:-0.816718583721;CEBPA,B_DDIT3:-0.82376137815;EP300:-0.826352663826;IRF7:-0.837248854195;TLX1..3_NFIC{dimer}:-0.858253711171;TAL1_TCF{3,4,12}:-0.85919431233;SMAD1..7,9:-0.873867712222;ELF1,2,4:-0.885202272091;ETS1,2:-0.913907335417;NFATC1..3:-0.946541144349;PAX6:-0.950320161066;SPZ1:-1.01174822966;IRF1,2:-1.01829619122;AR:-1.04797242708;HMGA1,2:-1.04849220149;GZF1:-1.06585047496;DMAP1_NCOR{1,2}_SMARC:-1.07145296438;MAFB:-1.08298625986;NKX2-2,8:-1.14409037141;GLI1..3:-1.24735316928;HES1:-1.28056277259;NR6A1:-1.29847990773;NFIL3:-1.30119085012;HOXA9_MEIS1:-1.35328346479;STAT2,4,6:-1.41351912383 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12725-135G7;search_select_hide=table117:FF:12725-135G7 | |||
}} | }} | ||
Latest revision as of 18:43, 4 June 2020
| Name: | H9 Embryoid body cells, melanocytic induction |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12825 |
| Sample type: | time courses |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12825
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12825
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0375 |
| 10 | 10 | 0.0104 |
| 100 | 100 | 0.787 |
| 101 | 101 | 0.249 |
| 102 | 102 | 0.811 |
| 103 | 103 | 0.159 |
| 104 | 104 | 0.597 |
| 105 | 105 | 0.266 |
| 106 | 106 | 0.0486 |
| 107 | 107 | 0.323 |
| 108 | 108 | 0.638 |
| 109 | 109 | 0.08 |
| 11 | 11 | 0.0527 |
| 110 | 110 | 0.165 |
| 111 | 111 | 0.00313 |
| 112 | 112 | 0.215 |
| 113 | 113 | 0.442 |
| 114 | 114 | 0.00394 |
| 115 | 115 | 0.262 |
| 116 | 116 | 0.645 |
| 117 | 117 | 0.0902 |
| 118 | 118 | 0.453 |
| 119 | 119 | 0.15 |
| 12 | 12 | 0.992 |
| 120 | 120 | 0.8 |
| 121 | 121 | 0.993 |
| 122 | 122 | 0.97 |
| 123 | 123 | 0.0169 |
| 124 | 124 | 0.199 |
| 125 | 125 | 0.259 |
| 126 | 126 | 0.72 |
| 127 | 127 | 0.502 |
| 128 | 128 | 0.363 |
| 129 | 129 | 0.385 |
| 13 | 13 | 0.39 |
| 130 | 130 | 0.184 |
| 131 | 131 | 0.752 |
| 132 | 132 | 0.978 |
| 133 | 133 | 0.773 |
| 134 | 134 | 0.593 |
| 135 | 135 | 0.141 |
| 136 | 136 | 0.426 |
| 137 | 137 | 0.264 |
| 138 | 138 | 0.13 |
| 139 | 139 | 0.00618 |
| 14 | 14 | 0.564 |
| 140 | 140 | 0.0608 |
| 141 | 141 | 0.301 |
| 142 | 142 | 0.99 |
| 143 | 143 | 0.00376 |
| 144 | 144 | 0.678 |
| 145 | 145 | 0.293 |
| 146 | 146 | 0.497 |
| 147 | 147 | 0.877 |
| 148 | 148 | 0.0119 |
| 149 | 149 | 0.024 |
| 15 | 15 | 0.0381 |
| 150 | 150 | 0.523 |
| 151 | 151 | 0.116 |
| 152 | 152 | 0.502 |
| 153 | 153 | 0.256 |
| 154 | 154 | 0.231 |
| 155 | 155 | 0.612 |
| 156 | 156 | 0.32 |
| 157 | 157 | 0.693 |
| 158 | 158 | 0.596 |
| 159 | 159 | 0.572 |
| 16 | 16 | 0.29 |
| 160 | 160 | 0.186 |
| 161 | 161 | 0.467 |
| 162 | 162 | 0.587 |
| 163 | 163 | 0.693 |
| 164 | 164 | 0.103 |
| 165 | 165 | 0.31 |
| 166 | 166 | 0.954 |
| 167 | 167 | 0.00998 |
| 168 | 168 | 0.295 |
| 169 | 169 | 5.02787e-4 |
| 17 | 17 | 0.213 |
| 18 | 18 | 0.236 |
| 19 | 19 | 0.221 |
| 2 | 2 | 0.706 |
| 20 | 20 | 0.829 |
| 21 | 21 | 0.353 |
| 22 | 22 | 0.295 |
| 23 | 23 | 0.0965 |
| 24 | 24 | 0.596 |
| 25 | 25 | 0.402 |
| 26 | 26 | 0.0505 |
| 27 | 27 | 0.514 |
| 28 | 28 | 0.695 |
| 29 | 29 | 0.45 |
| 3 | 3 | 0.04 |
| 30 | 30 | 0.542 |
| 31 | 31 | 0.916 |
| 32 | 32 | 0.0697 |
| 33 | 33 | 0.459 |
| 34 | 34 | 0.858 |
| 35 | 35 | 0.23 |
| 36 | 36 | 0.0199 |
| 37 | 37 | 0.133 |
| 38 | 38 | 0.263 |
| 39 | 39 | 0.547 |
| 4 | 4 | 0.953 |
| 40 | 40 | 0.387 |
| 41 | 41 | 0.191 |
| 42 | 42 | 0.153 |
| 43 | 43 | 0.107 |
| 44 | 44 | 0.885 |
| 45 | 45 | 0.794 |
| 46 | 46 | 0.0483 |
| 47 | 47 | 0.2 |
| 48 | 48 | 0.209 |
| 49 | 49 | 0.0718 |
| 5 | 5 | 0.0689 |
| 50 | 50 | 0.961 |
| 51 | 51 | 0.615 |
| 52 | 52 | 0.625 |
| 53 | 53 | 0.173 |
| 54 | 54 | 0.464 |
| 55 | 55 | 0.0245 |
| 56 | 56 | 0.53 |
| 57 | 57 | 0.251 |
| 58 | 58 | 0.0901 |
| 59 | 59 | 0.217 |
| 6 | 6 | 0.581 |
| 60 | 60 | 0.166 |
| 61 | 61 | 0.621 |
| 62 | 62 | 0.0362 |
| 63 | 63 | 0.0738 |
| 64 | 64 | 0.186 |
| 65 | 65 | 0.133 |
| 66 | 66 | 0.477 |
| 67 | 67 | 0.306 |
| 68 | 68 | 0.397 |
| 69 | 69 | 0.824 |
| 7 | 7 | 0.335 |
| 70 | 70 | 0.00537 |
| 71 | 71 | 0.021 |
| 72 | 72 | 0.456 |
| 73 | 73 | 0.118 |
| 74 | 74 | 0.285 |
| 75 | 75 | 0.0876 |
| 76 | 76 | 0.254 |
| 77 | 77 | 0.272 |
| 78 | 78 | 0.354 |
| 79 | 79 | 0.322 |
| 8 | 8 | 0.0737 |
| 80 | 80 | 0.389 |
| 81 | 81 | 0.22 |
| 82 | 82 | 0.0515 |
| 83 | 83 | 0.953 |
| 84 | 84 | 0.834 |
| 85 | 85 | 0.0804 |
| 86 | 86 | 0.26 |
| 87 | 87 | 0.988 |
| 88 | 88 | 0.942 |
| 89 | 89 | 0.123 |
| 9 | 9 | 0.318 |
| 90 | 90 | 0.105 |
| 91 | 91 | 0.187 |
| 92 | 92 | 0.0399 |
| 93 | 93 | 0.205 |
| 94 | 94 | 0.0245 |
| 95 | 95 | 0.657 |
| 96 | 96 | 0.0223 |
| 97 | 97 | 0.548 |
| 98 | 98 | 0.14 |
| 99 | 99 | 0.746 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12825
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000532 human H9 Embryoid body cells 0 days after melanocytic induction sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000147 (pigment cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000034 (stem cell)
0000148 (melanocyte)
0002322 (embryonic stem cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101581 (embryonic stem cell line sample)
0000350 (experimentally modified sample)
0000334 (melanocytic induction sample)
0000380 (0 days sample)
0000400 (H9 embryonic stem cell line sample)
0100669 (embryonic cell line sample)
0000532 (human H9 Embryoid body cells 0 days after melanocytic induction sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
