FF:12627-134E8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004802 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008583;DRR009455;DRZ000880;DRZ002265;DRZ012230;DRZ013615 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002321,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000147,CL:0000710,CL:0000255,CL:0002077,CL:0000034,CL:0000148,CL:0002322 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101581,FF:0000350,FF:0000334,FF:0000380,FF:0000400,FF:0100669,FF:0000532 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|donor= biol_rep1 | |||
|fonse_cell_line=FF:0100669 | |fonse_cell_line=FF:0100669 | ||
|fonse_cell_line_closure=FF:0100669 | |fonse_cell_line_closure=FF:0100669 | ||
| Line 35: | Line 43: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000334,FF:0000532,FF:12627-134E8 | |fonse_treatment_closure=EFO:0000369,FF:0000334,FF:0000532,FF:12627-134E8 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12627-134E8 | |id=FF:12627-134E8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000532 | ||
|name=H9 Embryoid body cells, melanocytic induction | |is_obsolete= | ||
|library_id=CNhs12822 | |||
|library_id_phase_based=2:CNhs12822 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12627 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12627 | |||
|name=H9 Embryoid body cells, melanocytic induction | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12822,LSID972,release012,COMPLETED | |profile_hcage=CNhs12822,LSID972,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=134 | |rna_box=134 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 54: | Line 77: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type= | |rna_sample_type= | ||
|rna_tube_id= | |rna_tube_id=1.34E+10 | ||
|rna_weight_ug=7 | |rna_weight_ug=7 | ||
|sample_age= | |sample_age= | ||
|sample_category=time courses | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line=H9 | |sample_cell_line=H9 | ||
| Line 69: | Line 93: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition=Human ES cell differentiation to melanocyte | |sample_experimental_condition=Human ES cell differentiation to melanocyte | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.51525464195128e-291!GO:0043226;organelle;2.86616745112917e-241!GO:0043229;intracellular organelle;1.12367130109872e-240!GO:0043227;membrane-bound organelle;2.03840227929064e-238!GO:0043231;intracellular membrane-bound organelle;2.03840227929064e-238!GO:0005737;cytoplasm;1.34030787454603e-182!GO:0044422;organelle part;4.58742325055142e-153!GO:0044446;intracellular organelle part;2.09102590066942e-151!GO:0044444;cytoplasmic part;1.15082497603354e-121!GO:0005634;nucleus;3.0025561776007e-118!GO:0032991;macromolecular complex;4.43735841523965e-111!GO:0044238;primary metabolic process;4.43735841523965e-111!GO:0044237;cellular metabolic process;5.54582001896278e-111!GO:0043170;macromolecule metabolic process;1.20549725813585e-104!GO:0030529;ribonucleoprotein complex;3.88349672274749e-96!GO:0044428;nuclear part;5.65343845982259e-86!GO:0003723;RNA binding;1.07856014319299e-84!GO:0043233;organelle lumen;9.17046927176419e-83!GO:0031974;membrane-enclosed lumen;9.17046927176419e-83!GO:0005515;protein binding;1.11726134924031e-82!GO:0005739;mitochondrion;5.92497151281659e-70!GO:0043283;biopolymer metabolic process;6.99113149362715e-67!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.51907115950348e-65!GO:0010467;gene expression;1.31652650156151e-64!GO:0006396;RNA processing;3.75027122885588e-59!GO:0016043;cellular component organization and biogenesis;6.84346147067978e-58!GO:0043234;protein complex;2.30111263730813e-55!GO:0005840;ribosome;5.8258219293577e-55!GO:0031981;nuclear lumen;2.71228468245917e-52!GO:0006412;translation;1.41023914934476e-51!GO:0003735;structural constituent of ribosome;9.30179794310225e-47!GO:0044429;mitochondrial part;1.84246143513024e-46!GO:0016071;mRNA metabolic process;9.05228771318572e-46!GO:0006996;organelle organization and biogenesis;4.40916684095349e-45!GO:0003676;nucleic acid binding;6.81531627993177e-44!GO:0019538;protein metabolic process;4.24834881471946e-43!GO:0008380;RNA splicing;5.11992886100017e-43!GO:0043228;non-membrane-bound organelle;9.41975770574916e-43!GO:0043232;intracellular non-membrane-bound organelle;9.41975770574916e-43!GO:0044249;cellular biosynthetic process;1.05014549782442e-42!GO:0009058;biosynthetic process;3.54137692769933e-42!GO:0033279;ribosomal subunit;4.07281766496535e-42!GO:0031090;organelle membrane;1.71439174107167e-41!GO:0031967;organelle envelope;2.21317406320872e-40!GO:0031975;envelope;5.20543327799137e-40!GO:0006397;mRNA processing;3.49949697879551e-39!GO:0006259;DNA metabolic process;1.71710209277864e-38!GO:0009059;macromolecule biosynthetic process;3.22450014981624e-38!GO:0015031;protein transport;1.3404154825719e-37!GO:0033036;macromolecule localization;1.40544422840475e-37!GO:0065003;macromolecular complex assembly;2.6181568603625e-37!GO:0044260;cellular macromolecule metabolic process;3.459442104569e-37!GO:0044267;cellular protein metabolic process;4.06442272732521e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.2894666019019e-36!GO:0016070;RNA metabolic process;4.9644234164406e-36!GO:0022607;cellular component assembly;1.00459628274044e-35!GO:0046907;intracellular transport;1.74251631319357e-35!GO:0005829;cytosol;7.00975656573609e-35!GO:0008104;protein localization;4.62845458949831e-33!GO:0045184;establishment of protein localization;7.05466114886509e-33!GO:0005681;spliceosome;1.83802890325479e-31!GO:0005654;nucleoplasm;3.01382046253389e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.16755843792146e-29!GO:0007049;cell cycle;7.18705626943869e-29!GO:0019866;organelle inner membrane;4.82267009054752e-28!GO:0005740;mitochondrial envelope;6.36987248747421e-28!GO:0006886;intracellular protein transport;3.3435586818437e-26!GO:0005743;mitochondrial inner membrane;8.56859372997065e-26!GO:0031966;mitochondrial membrane;1.16535231849935e-25!GO:0044451;nucleoplasm part;2.13428616037061e-25!GO:0000166;nucleotide binding;2.67248125407707e-24!GO:0005694;chromosome;3.62788838250564e-24!GO:0051649;establishment of cellular localization;6.13365745321383e-24!GO:0044445;cytosolic part;7.01596397150562e-24!GO:0006119;oxidative phosphorylation;9.31455843905942e-23!GO:0051641;cellular localization;9.49748878028539e-23!GO:0005730;nucleolus;2.39638965248497e-22!GO:0006974;response to DNA damage stimulus;2.39638965248497e-22!GO:0031980;mitochondrial lumen;3.10707348004656e-22!GO:0005759;mitochondrial matrix;3.10707348004656e-22!GO:0044455;mitochondrial membrane part;3.19726317473368e-22!GO:0000278;mitotic cell cycle;7.1282030318623e-22!GO:0022402;cell cycle process;1.11245980914415e-21!GO:0015934;large ribosomal subunit;1.38454418669745e-21!GO:0015935;small ribosomal subunit;1.38454418669745e-21!GO:0044427;chromosomal part;2.07214772664302e-21!GO:0051276;chromosome organization and biogenesis;1.39646275194275e-20!GO:0022618;protein-RNA complex assembly;3.70248030365986e-20!GO:0016462;pyrophosphatase activity;2.12569934856931e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.42503226938621e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;4.87881564679867e-19!GO:0000087;M phase of mitotic cell cycle;1.04257055139913e-18!GO:0022403;cell cycle phase;1.84040058239758e-18!GO:0007067;mitosis;2.43909696180632e-18!GO:0017111;nucleoside-triphosphatase activity;2.58732762640972e-18!GO:0016874;ligase activity;2.58732762640972e-18!GO:0044265;cellular macromolecule catabolic process;4.91115189529232e-18!GO:0006281;DNA repair;8.58231765500338e-18!GO:0051301;cell division;1.42586879243528e-17!GO:0006457;protein folding;1.67352533328956e-17!GO:0048770;pigment granule;4.33787911747464e-17!GO:0042470;melanosome;4.33787911747464e-17!GO:0005746;mitochondrial respiratory chain;1.03694823461477e-16!GO:0005761;mitochondrial ribosome;1.06818027429316e-16!GO:0000313;organellar ribosome;1.06818027429316e-16!GO:0008135;translation factor activity, nucleic acid binding;1.20686102457233e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;1.6605185325563e-16!GO:0000375;RNA splicing, via transesterification reactions;1.6605185325563e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.6605185325563e-16!GO:0042254;ribosome biogenesis and assembly;1.99687766579531e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.84826315715127e-16!GO:0003954;NADH dehydrogenase activity;2.84826315715127e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.84826315715127e-16!GO:0006512;ubiquitin cycle;3.35210253744327e-16!GO:0000279;M phase;3.35210253744327e-16!GO:0006260;DNA replication;3.93399756633624e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;4.00000617764682e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;4.03290623675662e-16!GO:0012505;endomembrane system;4.41887110489362e-16!GO:0008134;transcription factor binding;4.57626360655191e-16!GO:0043285;biopolymer catabolic process;4.86881198196269e-16!GO:0019941;modification-dependent protein catabolic process;6.77472396946406e-16!GO:0043632;modification-dependent macromolecule catabolic process;6.77472396946406e-16!GO:0006511;ubiquitin-dependent protein catabolic process;9.49665049761146e-16!GO:0009057;macromolecule catabolic process;9.49919385877469e-16!GO:0044257;cellular protein catabolic process;9.70180923849903e-16!GO:0032553;ribonucleotide binding;9.89072689815043e-16!GO:0032555;purine ribonucleotide binding;9.89072689815043e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.03956823197839e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.46438532340768e-15!GO:0006323;DNA packaging;2.0026988089564e-15!GO:0009719;response to endogenous stimulus;2.84315228310371e-15!GO:0044248;cellular catabolic process;3.70430261824385e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.94222256528142e-15!GO:0017076;purine nucleotide binding;7.22000836166525e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.14817509735148e-14!GO:0042775;organelle ATP synthesis coupled electron transport;5.39410984846168e-14!GO:0042773;ATP synthesis coupled electron transport;5.39410984846168e-14!GO:0030964;NADH dehydrogenase complex (quinone);5.39410984846168e-14!GO:0045271;respiratory chain complex I;5.39410984846168e-14!GO:0005747;mitochondrial respiratory chain complex I;5.39410984846168e-14!GO:0031965;nuclear membrane;5.90669538150021e-14!GO:0030163;protein catabolic process;7.13313185777927e-14!GO:0006605;protein targeting;1.34198055853008e-13!GO:0051082;unfolded protein binding;1.55303221713227e-13!GO:0050794;regulation of cellular process;1.78593917563069e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.84329292192529e-13!GO:0005794;Golgi apparatus;2.21050644834685e-13!GO:0005635;nuclear envelope;2.51259600394507e-13!GO:0044453;nuclear membrane part;4.09136770796498e-13!GO:0005524;ATP binding;5.58688829996029e-13!GO:0051186;cofactor metabolic process;9.22208496236967e-13!GO:0032559;adenyl ribonucleotide binding;1.21634815481345e-12!GO:0016604;nuclear body;1.9221961306629e-12!GO:0005643;nuclear pore;2.13648099586574e-12!GO:0006413;translational initiation;2.67406173020858e-12!GO:0006403;RNA localization;3.80401766674095e-12!GO:0006399;tRNA metabolic process;3.96999310581283e-12!GO:0003743;translation initiation factor activity;6.05623384066736e-12!GO:0043412;biopolymer modification;7.16505956025248e-12!GO:0006446;regulation of translational initiation;8.09114572634693e-12!GO:0050657;nucleic acid transport;8.33042150926145e-12!GO:0051236;establishment of RNA localization;8.33042150926145e-12!GO:0050658;RNA transport;8.33042150926145e-12!GO:0030554;adenyl nucleotide binding;1.07442180810423e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.28058787961161e-11!GO:0006364;rRNA processing;1.49541730380511e-11!GO:0016072;rRNA metabolic process;1.96337009747886e-11!GO:0000785;chromatin;2.08323142552674e-11!GO:0004386;helicase activity;2.15271503657323e-11!GO:0006366;transcription from RNA polymerase II promoter;2.50503476264112e-11!GO:0006732;coenzyme metabolic process;3.5126081905748e-11!GO:0048193;Golgi vesicle transport;3.56605851465249e-11!GO:0019222;regulation of metabolic process;3.9971182583257e-11!GO:0005783;endoplasmic reticulum;6.45385935971572e-11!GO:0006913;nucleocytoplasmic transport;8.02548082994882e-11!GO:0042623;ATPase activity, coupled;8.38257595627801e-11!GO:0065004;protein-DNA complex assembly;9.91604907937829e-11!GO:0006461;protein complex assembly;1.00606708020289e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.15841400471265e-10!GO:0015630;microtubule cytoskeleton;1.30436484285048e-10!GO:0008565;protein transporter activity;1.42434427511739e-10!GO:0050789;regulation of biological process;1.47309242069877e-10!GO:0016607;nuclear speck;1.98244993379001e-10!GO:0065002;intracellular protein transport across a membrane;2.04238967298708e-10!GO:0016887;ATPase activity;2.10570757014354e-10!GO:0051169;nuclear transport;2.52499339020755e-10!GO:0030532;small nuclear ribonucleoprotein complex;4.04374206989045e-10!GO:0006333;chromatin assembly or disassembly;4.1817041211701e-10!GO:0006464;protein modification process;5.83207776973991e-10!GO:0008026;ATP-dependent helicase activity;6.05563304245871e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.09281365565026e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.11650101473459e-10!GO:0004812;aminoacyl-tRNA ligase activity;6.11650101473459e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.11650101473459e-10!GO:0051028;mRNA transport;6.17054186426965e-10!GO:0009055;electron carrier activity;7.65033845160408e-10!GO:0046930;pore complex;1.57613817603303e-09!GO:0043038;amino acid activation;1.73205462929615e-09!GO:0006418;tRNA aminoacylation for protein translation;1.73205462929615e-09!GO:0043039;tRNA aminoacylation;1.73205462929615e-09!GO:0000074;regulation of progression through cell cycle;1.82301301412806e-09!GO:0051726;regulation of cell cycle;1.91268014024102e-09!GO:0003712;transcription cofactor activity;2.10327703102372e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.90439616118488e-09!GO:0009259;ribonucleotide metabolic process;4.38381406710736e-09!GO:0043687;post-translational protein modification;4.74241074281291e-09!GO:0016192;vesicle-mediated transport;5.10442023892923e-09!GO:0009056;catabolic process;5.37393493551931e-09!GO:0006163;purine nucleotide metabolic process;5.49003402905484e-09!GO:0006164;purine nucleotide biosynthetic process;7.11097294219448e-09!GO:0016568;chromatin modification;7.17104929629439e-09!GO:0006261;DNA-dependent DNA replication;7.70936989173475e-09!GO:0009260;ribonucleotide biosynthetic process;1.21972699752756e-08!GO:0043566;structure-specific DNA binding;1.52640274471366e-08!GO:0016740;transferase activity;1.54656615292777e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.81854393339909e-08!GO:0003697;single-stranded DNA binding;2.07125323060628e-08!GO:0031323;regulation of cellular metabolic process;2.0868776737135e-08!GO:0006350;transcription;2.23208600521707e-08!GO:0005793;ER-Golgi intermediate compartment;2.33234480272673e-08!GO:0000775;chromosome, pericentric region;2.53411473665566e-08!GO:0017038;protein import;2.81811948375188e-08!GO:0031497;chromatin assembly;3.61511167253687e-08!GO:0015986;ATP synthesis coupled proton transport;3.82260913297912e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.82260913297912e-08!GO:0044432;endoplasmic reticulum part;4.20798891506359e-08!GO:0008639;small protein conjugating enzyme activity;4.52772759780985e-08!GO:0009150;purine ribonucleotide metabolic process;4.62818873844901e-08!GO:0009152;purine ribonucleotide biosynthetic process;6.23311249528797e-08!GO:0006334;nucleosome assembly;7.07905244533347e-08!GO:0016779;nucleotidyltransferase activity;8.38484315794708e-08!GO:0004842;ubiquitin-protein ligase activity;8.65371960158986e-08!GO:0009060;aerobic respiration;1.0138716630441e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.26999030810826e-07!GO:0019787;small conjugating protein ligase activity;1.35910003136955e-07!GO:0045333;cellular respiration;1.37949941744382e-07!GO:0000245;spliceosome assembly;1.55933719260363e-07!GO:0007005;mitochondrion organization and biogenesis;1.8678238629985e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.12029957329255e-07!GO:0019829;cation-transporting ATPase activity;2.40283152276587e-07!GO:0010468;regulation of gene expression;2.40283152276587e-07!GO:0005819;spindle;2.88698779694167e-07!GO:0051188;cofactor biosynthetic process;3.50798261093467e-07!GO:0031988;membrane-bound vesicle;3.69942588330046e-07!GO:0007010;cytoskeleton organization and biogenesis;3.75051731982746e-07!GO:0007051;spindle organization and biogenesis;4.22323172249963e-07!GO:0003899;DNA-directed RNA polymerase activity;4.39107926611497e-07!GO:0031982;vesicle;5.38203607954346e-07!GO:0012501;programmed cell death;5.44826143606159e-07!GO:0005667;transcription factor complex;5.46340340938034e-07!GO:0043623;cellular protein complex assembly;5.46348112567831e-07!GO:0016469;proton-transporting two-sector ATPase complex;5.81904686007359e-07!GO:0016023;cytoplasmic membrane-bound vesicle;5.81904686007359e-07!GO:0048523;negative regulation of cellular process;5.98139252691369e-07!GO:0032774;RNA biosynthetic process;7.39590027839615e-07!GO:0009142;nucleoside triphosphate biosynthetic process;8.39098502632197e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.39098502632197e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.61041581464258e-07!GO:0031410;cytoplasmic vesicle;9.13114151752936e-07!GO:0006915;apoptosis;9.17387840627102e-07!GO:0005657;replication fork;9.17387840627102e-07!GO:0051246;regulation of protein metabolic process;9.17387840627102e-07!GO:0006351;transcription, DNA-dependent;9.48722689812672e-07!GO:0006099;tricarboxylic acid cycle;1.13359034425744e-06!GO:0046356;acetyl-CoA catabolic process;1.13359034425744e-06!GO:0003924;GTPase activity;1.24639089942122e-06!GO:0006754;ATP biosynthetic process;1.3002702802988e-06!GO:0006753;nucleoside phosphate metabolic process;1.3002702802988e-06!GO:0009117;nucleotide metabolic process;1.32805719581325e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.35133112362737e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.36785321522517e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.40042410349421e-06!GO:0009141;nucleoside triphosphate metabolic process;1.42613975539467e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.63743951309896e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.63743951309896e-06!GO:0003724;RNA helicase activity;2.00656828358106e-06!GO:0048475;coated membrane;2.02140897902749e-06!GO:0030117;membrane coat;2.02140897902749e-06!GO:0009108;coenzyme biosynthetic process;2.04373634247573e-06!GO:0008094;DNA-dependent ATPase activity;2.04373634247573e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.08493266699315e-06!GO:0045259;proton-transporting ATP synthase complex;2.19323389616488e-06!GO:0006084;acetyl-CoA metabolic process;2.21117992229176e-06!GO:0032446;protein modification by small protein conjugation;2.2928398075306e-06!GO:0016881;acid-amino acid ligase activity;2.34282233342266e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.56095519248819e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.56095519248819e-06!GO:0046034;ATP metabolic process;3.19384066011502e-06!GO:0006752;group transfer coenzyme metabolic process;4.00370445383081e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.66890612046474e-06!GO:0007017;microtubule-based process;4.80420689881883e-06!GO:0031324;negative regulation of cellular metabolic process;5.04487922925126e-06!GO:0000314;organellar small ribosomal subunit;5.18206140060886e-06!GO:0005763;mitochondrial small ribosomal subunit;5.18206140060886e-06!GO:0016567;protein ubiquitination;5.28245031548147e-06!GO:0005762;mitochondrial large ribosomal subunit;5.76094404761545e-06!GO:0000315;organellar large ribosomal subunit;5.76094404761545e-06!GO:0008219;cell death;6.36887062152087e-06!GO:0016265;death;6.36887062152087e-06!GO:0016853;isomerase activity;7.09245764859613e-06!GO:0065007;biological regulation;7.76295835351473e-06!GO:0005768;endosome;8.38243325940382e-06!GO:0051329;interphase of mitotic cell cycle;8.81859901285323e-06!GO:0044431;Golgi apparatus part;9.5945599663346e-06!GO:0048519;negative regulation of biological process;1.04497018048544e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.05242377266648e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.21574317936545e-05!GO:0005525;GTP binding;1.2304020698952e-05!GO:0009109;coenzyme catabolic process;1.39362123937281e-05!GO:0030120;vesicle coat;1.62807714980858e-05!GO:0030662;coated vesicle membrane;1.62807714980858e-05!GO:0051325;interphase;1.65619203526258e-05!GO:0051170;nuclear import;1.66733460415922e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.66887304601185e-05!GO:0005813;centrosome;1.84845512394126e-05!GO:0051187;cofactor catabolic process;1.88220325399391e-05!GO:0009892;negative regulation of metabolic process;1.91296111264438e-05!GO:0005789;endoplasmic reticulum membrane;1.95492784408222e-05!GO:0005874;microtubule;2.00676992781004e-05!GO:0051168;nuclear export;2.16907519419388e-05!GO:0051427;hormone receptor binding;2.18891214294513e-05!GO:0006613;cotranslational protein targeting to membrane;2.28806810019882e-05!GO:0000075;cell cycle checkpoint;2.74640540110825e-05!GO:0003677;DNA binding;2.84356772720337e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;2.86237927415593e-05!GO:0042802;identical protein binding;3.02845242851082e-05!GO:0045449;regulation of transcription;3.08646565968415e-05!GO:0003682;chromatin binding;3.27748701851964e-05!GO:0006606;protein import into nucleus;4.33425413147458e-05!GO:0016859;cis-trans isomerase activity;4.42941168005634e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;4.85397574566646e-05!GO:0035257;nuclear hormone receptor binding;4.85397574566646e-05!GO:0031252;leading edge;4.86003556231987e-05!GO:0006793;phosphorus metabolic process;4.86003556231987e-05!GO:0006796;phosphate metabolic process;4.86003556231987e-05!GO:0043021;ribonucleoprotein binding;4.86613240515169e-05!GO:0008186;RNA-dependent ATPase activity;4.91294343562511e-05!GO:0016363;nuclear matrix;4.94131706736548e-05!GO:0005815;microtubule organizing center;4.94299162718197e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.07640050314368e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;5.22131918194277e-05!GO:0006520;amino acid metabolic process;5.22131918194277e-05!GO:0003690;double-stranded DNA binding;5.37618190122866e-05!GO:0006383;transcription from RNA polymerase III promoter;5.43043406738802e-05!GO:0004298;threonine endopeptidase activity;5.91359824280057e-05!GO:0003729;mRNA binding;6.27602335510873e-05!GO:0016741;transferase activity, transferring one-carbon groups;6.35211263756046e-05!GO:0016564;transcription repressor activity;6.67808474551559e-05!GO:0000776;kinetochore;9.24649759512268e-05!GO:0003713;transcription coactivator activity;0.000104746390064235!GO:0006355;regulation of transcription, DNA-dependent;0.000109867506739785!GO:0016563;transcription activator activity;0.000123599975701021!GO:0044452;nucleolar part;0.00012396890088472!GO:0008168;methyltransferase activity;0.000127276940680082!GO:0016481;negative regulation of transcription;0.000129035158626747!GO:0006302;double-strand break repair;0.000129972412423239!GO:0000139;Golgi membrane;0.000130033290149116!GO:0032561;guanyl ribonucleotide binding;0.000136119022048373!GO:0019001;guanyl nucleotide binding;0.000136119022048373!GO:0004004;ATP-dependent RNA helicase activity;0.00015672391461154!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000165606119827718!GO:0043069;negative regulation of programmed cell death;0.000166320526520771!GO:0006402;mRNA catabolic process;0.000166364059944774!GO:0007059;chromosome segregation;0.000175868472587518!GO:0007093;mitotic cell cycle checkpoint;0.000191471617028061!GO:0009165;nucleotide biosynthetic process;0.000197186504567485!GO:0043681;protein import into mitochondrion;0.000213694720176822!GO:0016310;phosphorylation;0.000214652320916018!GO:0043066;negative regulation of apoptosis;0.000234794836974299!GO:0006839;mitochondrial transport;0.00024368927075956!GO:0006401;RNA catabolic process;0.000244897950371452!GO:0030880;RNA polymerase complex;0.000249312844443713!GO:0006338;chromatin remodeling;0.000255440350263843!GO:0005788;endoplasmic reticulum lumen;0.000268380469165458!GO:0005770;late endosome;0.000269533898093325!GO:0006612;protein targeting to membrane;0.000279009635774065!GO:0005798;Golgi-associated vesicle;0.00028820799163267!GO:0051052;regulation of DNA metabolic process;0.000288262926318221!GO:0005769;early endosome;0.000308444768517706!GO:0000059;protein import into nucleus, docking;0.000343893158351457!GO:0051087;chaperone binding;0.000344735041979586!GO:0044440;endosomal part;0.000346586876754335!GO:0010008;endosome membrane;0.000346586876754335!GO:0015631;tubulin binding;0.000364421866936458!GO:0007006;mitochondrial membrane organization and biogenesis;0.000364421866936458!GO:0008033;tRNA processing;0.0003706019769466!GO:0045454;cell redox homeostasis;0.0003706019769466!GO:0005684;U2-dependent spliceosome;0.000373153559050107!GO:0000151;ubiquitin ligase complex;0.000373550266344505!GO:0015980;energy derivation by oxidation of organic compounds;0.000412753505296074!GO:0030867;rough endoplasmic reticulum membrane;0.00041445325785006!GO:0006519;amino acid and derivative metabolic process;0.000416558244219482!GO:0048471;perinuclear region of cytoplasm;0.000423553652497672!GO:0006414;translational elongation;0.000425137696272716!GO:0008654;phospholipid biosynthetic process;0.00043212841040299!GO:0003714;transcription corepressor activity;0.000514148346028734!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000529949533147479!GO:0051920;peroxiredoxin activity;0.000560495187628658!GO:0051252;regulation of RNA metabolic process;0.000582905605531665!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000582905605531665!GO:0007052;mitotic spindle organization and biogenesis;0.000602698776025591!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000630539778058461!GO:0000428;DNA-directed RNA polymerase complex;0.000630539778058461!GO:0008250;oligosaccharyl transferase complex;0.000634893841522856!GO:0009112;nucleobase metabolic process;0.000668270501270142!GO:0006730;one-carbon compound metabolic process;0.000679702674880413!GO:0003684;damaged DNA binding;0.000686654304905794!GO:0007088;regulation of mitosis;0.000704131686079424!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000812699145787716!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000831415819442392!GO:0045786;negative regulation of progression through cell cycle;0.000843726855264924!GO:0007264;small GTPase mediated signal transduction;0.000862540868409091!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000871363035065022!GO:0032508;DNA duplex unwinding;0.000881274490467409!GO:0032392;DNA geometric change;0.000881274490467409!GO:0006916;anti-apoptosis;0.000909598748731347!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000939244371736783!GO:0003678;DNA helicase activity;0.000975570484052488!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000975570484052488!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000975570484052488!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000975570484052488!GO:0048487;beta-tubulin binding;0.00102515302561654!GO:0042981;regulation of apoptosis;0.00115928026435258!GO:0043414;biopolymer methylation;0.0011673718589241!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00117274361322634!GO:0045892;negative regulation of transcription, DNA-dependent;0.00123012137756118!GO:0005048;signal sequence binding;0.00126165842593565!GO:0006144;purine base metabolic process;0.00128814958573956!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00129609184325934!GO:0043067;regulation of programmed cell death;0.00129657926864841!GO:0030036;actin cytoskeleton organization and biogenesis;0.00133584607416223!GO:0043488;regulation of mRNA stability;0.00134210107031195!GO:0043487;regulation of RNA stability;0.00134210107031195!GO:0000786;nucleosome;0.00138584591207096!GO:0016272;prefoldin complex;0.00142220214827757!GO:0006405;RNA export from nucleus;0.00148413489465577!GO:0006541;glutamine metabolic process;0.00148799612698634!GO:0006268;DNA unwinding during replication;0.00148976213990696!GO:0032259;methylation;0.00149392604870664!GO:0006352;transcription initiation;0.00155887279661232!GO:0033116;ER-Golgi intermediate compartment membrane;0.00155887279661232!GO:0040029;regulation of gene expression, epigenetic;0.00158715032345134!GO:0006626;protein targeting to mitochondrion;0.00158758192382589!GO:0044262;cellular carbohydrate metabolic process;0.0016672825434804!GO:0016126;sterol biosynthetic process;0.00173817143779766!GO:0005791;rough endoplasmic reticulum;0.00185858770304148!GO:0004576;oligosaccharyl transferase activity;0.00189908385694744!GO:0019843;rRNA binding;0.00202321199771984!GO:0046483;heterocycle metabolic process;0.00204795495616536!GO:0006310;DNA recombination;0.00210603746772781!GO:0004527;exonuclease activity;0.00225024587590071!GO:0000228;nuclear chromosome;0.0023199420204274!GO:0006284;base-excision repair;0.00238415444259046!GO:0008092;cytoskeletal protein binding;0.00264722276798149!GO:0016251;general RNA polymerase II transcription factor activity;0.00269442604974388!GO:0000159;protein phosphatase type 2A complex;0.0029070489566991!GO:0005758;mitochondrial intermembrane space;0.00291719077038176!GO:0000049;tRNA binding;0.00302747261441185!GO:0005885;Arp2/3 protein complex;0.00302747261441185!GO:0008652;amino acid biosynthetic process;0.00303762087480526!GO:0006595;polyamine metabolic process;0.00318493652922374!GO:0048500;signal recognition particle;0.00322205229704811!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00324080225019298!GO:0003711;transcription elongation regulator activity;0.00330144693344162!GO:0008601;protein phosphatase type 2A regulator activity;0.00342401926298443!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00346230704018765!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00346230704018765!GO:0009116;nucleoside metabolic process;0.00354375481693601!GO:0032200;telomere organization and biogenesis;0.00354497592562143!GO:0000723;telomere maintenance;0.00354497592562143!GO:0030118;clathrin coat;0.00357836033362619!GO:0006007;glucose catabolic process;0.00360974722763716!GO:0005741;mitochondrial outer membrane;0.00363548832607007!GO:0008022;protein C-terminus binding;0.00367916984199156!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00376504545567328!GO:0030029;actin filament-based process;0.00377282016965365!GO:0006611;protein export from nucleus;0.0040408076692948!GO:0008287;protein serine/threonine phosphatase complex;0.00429095179070645!GO:0005637;nuclear inner membrane;0.00441611390934005!GO:0005876;spindle microtubule;0.00447600035129572!GO:0006270;DNA replication initiation;0.00448210395581173!GO:0018196;peptidyl-asparagine modification;0.00453248272507434!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00453248272507434!GO:0043596;nuclear replication fork;0.00465850728017855!GO:0003746;translation elongation factor activity;0.00498069422843968!GO:0046474;glycerophospholipid biosynthetic process;0.0049896787805007!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00502358916734907!GO:0008312;7S RNA binding;0.00504733103031124!GO:0031970;organelle envelope lumen;0.00510409774993718!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0051265632943515!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0051265632943515!GO:0051287;NAD binding;0.00524307905019858!GO:0031124;mRNA 3'-end processing;0.00532446231156373!GO:0031968;organelle outer membrane;0.00543946426371943!GO:0030027;lamellipodium;0.00556441319611954!GO:0035258;steroid hormone receptor binding;0.00564827797012003!GO:0008139;nuclear localization sequence binding;0.00576454543271765!GO:0016584;nucleosome positioning;0.00579652652750011!GO:0006378;mRNA polyadenylation;0.00616610457229513!GO:0005669;transcription factor TFIID complex;0.00617873201665054!GO:0005905;coated pit;0.00618669593221491!GO:0000178;exosome (RNase complex);0.00618669593221491!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00622062602462927!GO:0045893;positive regulation of transcription, DNA-dependent;0.00622606883963297!GO:0000792;heterochromatin;0.0066296455928184!GO:0000922;spindle pole;0.00674757661470621!GO:0019752;carboxylic acid metabolic process;0.00676531121721498!GO:0000209;protein polyubiquitination;0.00684990290438352!GO:0006275;regulation of DNA replication;0.00695961392534834!GO:0016787;hydrolase activity;0.00722209493894883!GO:0009303;rRNA transcription;0.00725421917523212!GO:0019867;outer membrane;0.00726644549327144!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00737389783167872!GO:0045047;protein targeting to ER;0.00737389783167872!GO:0016491;oxidoreductase activity;0.00737435964391036!GO:0030521;androgen receptor signaling pathway;0.00740481707568157!GO:0006082;organic acid metabolic process;0.00754103035919309!GO:0006695;cholesterol biosynthetic process;0.00755049027588932!GO:0001726;ruffle;0.00756941614737786!GO:0008180;signalosome;0.00763316557022077!GO:0031072;heat shock protein binding;0.00783738710506957!GO:0043022;ribosome binding;0.00783738710506957!GO:0045045;secretory pathway;0.00783738710506957!GO:0030658;transport vesicle membrane;0.00793206640375814!GO:0030659;cytoplasmic vesicle membrane;0.0079700002146264!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00797599096579472!GO:0043284;biopolymer biosynthetic process;0.00833588388485117!GO:0051789;response to protein stimulus;0.00837462541316147!GO:0006986;response to unfolded protein;0.00837462541316147!GO:0012506;vesicle membrane;0.00848056738781374!GO:0030119;AP-type membrane coat adaptor complex;0.00855875977826858!GO:0005832;chaperonin-containing T-complex;0.00882160757974527!GO:0000339;RNA cap binding;0.0088316304066293!GO:0030663;COPI coated vesicle membrane;0.00896345085800562!GO:0030126;COPI vesicle coat;0.00896345085800562!GO:0042393;histone binding;0.00900461540528229!GO:0019899;enzyme binding;0.00924649978656817!GO:0030134;ER to Golgi transport vesicle;0.00927673501532297!GO:0007004;telomere maintenance via telomerase;0.00927673501532297!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00932679926894639!GO:0003702;RNA polymerase II transcription factor activity;0.00934031217700322!GO:0044454;nuclear chromosome part;0.00949623911959327!GO:0009308;amine metabolic process;0.00949623911959327!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00949623911959327!GO:0015002;heme-copper terminal oxidase activity;0.00949623911959327!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00949623911959327!GO:0004129;cytochrome-c oxidase activity;0.00949623911959327!GO:0031577;spindle checkpoint;0.00957269664017109!GO:0000725;recombinational repair;0.00994318209874133!GO:0000724;double-strand break repair via homologous recombination;0.00994318209874133!GO:0004518;nuclease activity;0.0101305273329105!GO:0006891;intra-Golgi vesicle-mediated transport;0.0101957882902276!GO:0044433;cytoplasmic vesicle part;0.0102704498739755!GO:0005996;monosaccharide metabolic process;0.0103843404756394!GO:0004532;exoribonuclease activity;0.0104107888845113!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0104107888845113!GO:0051539;4 iron, 4 sulfur cluster binding;0.0104616714060648!GO:0009451;RNA modification;0.0105539577597968!GO:0030133;transport vesicle;0.0111929290820436!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0116102026031146!GO:0030131;clathrin adaptor complex;0.012237948091985!GO:0007021;tubulin folding;0.0128043337281286!GO:0006289;nucleotide-excision repair;0.0128882752418026!GO:0042770;DNA damage response, signal transduction;0.0128992722566728!GO:0051101;regulation of DNA binding;0.0129381253726375!GO:0000910;cytokinesis;0.0129867984757885!GO:0009064;glutamine family amino acid metabolic process;0.0129867984757885!GO:0051540;metal cluster binding;0.0133360205564053!GO:0051536;iron-sulfur cluster binding;0.0133360205564053!GO:0000781;chromosome, telomeric region;0.0135708247931738!GO:0045941;positive regulation of transcription;0.013624405636379!GO:0044450;microtubule organizing center part;0.0137657698212532!GO:0030127;COPII vesicle coat;0.0143671059240651!GO:0012507;ER to Golgi transport vesicle membrane;0.0143671059240651!GO:0030660;Golgi-associated vesicle membrane;0.0143822987604476!GO:0019318;hexose metabolic process;0.0144260436356468!GO:0006376;mRNA splice site selection;0.0146974291011942!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0146974291011942!GO:0043601;nuclear replisome;0.0148045891594004!GO:0030894;replisome;0.0148045891594004!GO:0006807;nitrogen compound metabolic process;0.0148248979963039!GO:0000096;sulfur amino acid metabolic process;0.0151912619003822!GO:0006650;glycerophospholipid metabolic process;0.0152913945362458!GO:0008017;microtubule binding;0.0153676193091727!GO:0006790;sulfur metabolic process;0.0155267599494969!GO:0030496;midbody;0.0170443272122847!GO:0050662;coenzyme binding;0.0173441201449715!GO:0004003;ATP-dependent DNA helicase activity;0.017741895705424!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0179249193610157!GO:0016044;membrane organization and biogenesis;0.0179249193610157!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0182144839912002!GO:0006278;RNA-dependent DNA replication;0.0182349270212773!GO:0046467;membrane lipid biosynthetic process;0.0182621751212384!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0187749664321375!GO:0031570;DNA integrity checkpoint;0.0187986139494385!GO:0050178;phenylpyruvate tautomerase activity;0.0188812591082881!GO:0016835;carbon-oxygen lyase activity;0.0193239352796865!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0193239352796865!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0193981781252537!GO:0005862;muscle thin filament tropomyosin;0.0196221721112865!GO:0030176;integral to endoplasmic reticulum membrane;0.0200902445455823!GO:0048468;cell development;0.0203926649517453!GO:0065009;regulation of a molecular function;0.0204048946677444!GO:0030137;COPI-coated vesicle;0.0205345732160583!GO:0017166;vinculin binding;0.0205667360662119!GO:0009081;branched chain family amino acid metabolic process;0.0206835320145521!GO:0016585;chromatin remodeling complex;0.0207804525003701!GO:0043624;cellular protein complex disassembly;0.0208657382475492!GO:0006220;pyrimidine nucleotide metabolic process;0.021233595094674!GO:0008361;regulation of cell size;0.0215573905968095!GO:0015992;proton transport;0.0216827413672467!GO:0046365;monosaccharide catabolic process;0.0217393944970532!GO:0051098;regulation of binding;0.0217470370797295!GO:0005663;DNA replication factor C complex;0.0219760095423999!GO:0051656;establishment of organelle localization;0.0220467545396692!GO:0022890;inorganic cation transmembrane transporter activity;0.0224492927676417!GO:0000082;G1/S transition of mitotic cell cycle;0.0226351934893388!GO:0006096;glycolysis;0.0227850832345041!GO:0031123;RNA 3'-end processing;0.0232359635343853!GO:0001725;stress fiber;0.0236865432627641!GO:0032432;actin filament bundle;0.0236865432627641!GO:0032984;macromolecular complex disassembly;0.0237581825387216!GO:0005773;vacuole;0.0239816606367396!GO:0005853;eukaryotic translation elongation factor 1 complex;0.024053437032615!GO:0006818;hydrogen transport;0.0247855294958022!GO:0045947;negative regulation of translational initiation;0.0258033077713101!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0258033077713101!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0259254801508672!GO:0010257;NADH dehydrogenase complex assembly;0.0259254801508672!GO:0033108;mitochondrial respiratory chain complex assembly;0.0259254801508672!GO:0009119;ribonucleoside metabolic process;0.0261212720445694!GO:0006400;tRNA modification;0.026276631486739!GO:0000070;mitotic sister chromatid segregation;0.0266471844428579!GO:0006417;regulation of translation;0.0269883408995876!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0270803891116098!GO:0000819;sister chromatid segregation;0.0272152630054139!GO:0008276;protein methyltransferase activity;0.0277014780501795!GO:0005652;nuclear lamina;0.0278786887917117!GO:0006740;NADPH regeneration;0.0288119364225064!GO:0006098;pentose-phosphate shunt;0.0288119364225064!GO:0006091;generation of precursor metabolites and energy;0.0298568490336769!GO:0000726;non-recombinational repair;0.0300411474246119!GO:0008632;apoptotic program;0.0301085653820975!GO:0016049;cell growth;0.0303961881233625!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0310050088112579!GO:0001824;blastocyst development;0.0314187769018663!GO:0008320;protein transmembrane transporter activity;0.0316495349610392!GO:0008408;3'-5' exonuclease activity;0.0318887746831978!GO:0005938;cell cortex;0.0319291284980309!GO:0046489;phosphoinositide biosynthetic process;0.0320607089623317!GO:0005784;translocon complex;0.0327833136479963!GO:0019320;hexose catabolic process;0.0337085564905198!GO:0030518;steroid hormone receptor signaling pathway;0.0337085564905198!GO:0009124;nucleoside monophosphate biosynthetic process;0.0338215787982613!GO:0009123;nucleoside monophosphate metabolic process;0.0338215787982613!GO:0043631;RNA polyadenylation;0.0338215787982613!GO:0005869;dynactin complex;0.0342167303977045!GO:0016407;acetyltransferase activity;0.0347536014994632!GO:0046983;protein dimerization activity;0.0348661749866968!GO:0042769;DNA damage response, detection of DNA damage;0.0350928007264923!GO:0009113;purine base biosynthetic process;0.0352205186497508!GO:0016836;hydro-lyase activity;0.0353464146827647!GO:0022411;cellular component disassembly;0.0361924186862133!GO:0000097;sulfur amino acid biosynthetic process;0.0362147671194499!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0363144662053131!GO:0045039;protein import into mitochondrial inner membrane;0.0363144662053131!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0364273797379004!GO:0031371;ubiquitin conjugating enzyme complex;0.0366386721771129!GO:0000123;histone acetyltransferase complex;0.0366605601702376!GO:0005875;microtubule associated complex;0.0368404564256274!GO:0022884;macromolecule transmembrane transporter activity;0.0368404564256274!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0368404564256274!GO:0004722;protein serine/threonine phosphatase activity;0.0368949074798056!GO:0046966;thyroid hormone receptor binding;0.0371200641013817!GO:0008097;5S rRNA binding;0.03719610069043!GO:0007050;cell cycle arrest;0.03719610069043!GO:0019783;small conjugating protein-specific protease activity;0.0379497486725462!GO:0035267;NuA4 histone acetyltransferase complex;0.0380108862778526!GO:0046426;negative regulation of JAK-STAT cascade;0.0380108862778526!GO:0008538;proteasome activator activity;0.0382402889958833!GO:0043241;protein complex disassembly;0.0384183692737021!GO:0017134;fibroblast growth factor binding;0.0388947983852798!GO:0008629;induction of apoptosis by intracellular signals;0.0392715243995196!GO:0016197;endosome transport;0.0396731242995599!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0397325087778518!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0397392820482722!GO:0030145;manganese ion binding;0.0402239226053054!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0402239226053054!GO:0055083;monovalent inorganic anion homeostasis;0.0402239226053054!GO:0055064;chloride ion homeostasis;0.0402239226053054!GO:0030644;cellular chloride ion homeostasis;0.0402239226053054!GO:0046164;alcohol catabolic process;0.0402239226053054!GO:0000118;histone deacetylase complex;0.0403690002400675!GO:0001558;regulation of cell growth;0.040610152322097!GO:0006733;oxidoreduction coenzyme metabolic process;0.0416413375803849!GO:0004680;casein kinase activity;0.0416413375803849!GO:0000062;acyl-CoA binding;0.0416423287165429!GO:0046128;purine ribonucleoside metabolic process;0.0417115999839732!GO:0042278;purine nucleoside metabolic process;0.0417115999839732!GO:0031625;ubiquitin protein ligase binding;0.0420149739939977!GO:0043189;H4/H2A histone acetyltransferase complex;0.0424454846042243!GO:0051128;regulation of cellular component organization and biogenesis;0.0446006857286256!GO:0008213;protein amino acid alkylation;0.0447893593949912!GO:0006479;protein amino acid methylation;0.0447893593949912!GO:0006006;glucose metabolic process;0.0448615037252866!GO:0008143;poly(A) binding;0.0449889156434004!GO:0050749;apolipoprotein E receptor binding;0.045005109819416!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0454303693044514!GO:0006607;NLS-bearing substrate import into nucleus;0.0454614221841511!GO:0008154;actin polymerization and/or depolymerization;0.0457073602228099!GO:0000793;condensed chromosome;0.0460014153225177!GO:0005666;DNA-directed RNA polymerase III complex;0.0463494185643037!GO:0000086;G2/M transition of mitotic cell cycle;0.0476111839729682!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0477430101467297!GO:0042026;protein refolding;0.0493062398714757!GO:0043086;negative regulation of catalytic activity;0.0495524474578914 | |||
|sample_id=12627 | |sample_id=12627 | ||
|sample_note= | |sample_note= | ||
| Line 75: | Line 100: | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=unclassifiable | |sample_tissue=unclassifiable | ||
|time= day00 | |||
|timecourse=Embryoid_body_to_melanocyte | |||
|top_motifs=OCT4_SOX2{dimer}:2.71159397879;PATZ1:2.39988933635;T:2.12066871191;SP1:2.06724247944;GFI1:1.68874997617;SNAI1..3:1.56131167173;NFY{A,B,C}:1.55644360843;PBX1:1.48593665526;RBPJ:1.43943019902;SOX{8,9,10}:1.42775405161;E2F1..5:1.41676695197;XCPE1{core}:1.40767022087;NANOG:1.35976761428;PAX1,9:1.3477811251;TBP:1.31357940391;MAZ:1.30291355005;MZF1:1.28963388314;POU5F1:1.2583472212;FOXM1:1.20962065772;POU2F1..3:1.18504802;ZIC1..3:1.15145367475;RREB1:1.15053725763;EBF1:1.13698914806;MYOD1:1.13322839371;ZEB1:1.10831413762;VSX1,2:1.08500676794;SOX2:1.04856361771;ZNF143:1.04284247439;ZNF384:1.04046968846;RORA:0.999479807872;ONECUT1,2:0.992938577222;TFDP1:0.983098778356;HIF1A:0.928116226376;STAT1,3:0.927609434047;LEF1_TCF7_TCF7L1,2:0.90672615341;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.865527305102;NKX2-3_NKX2-5:0.845587603302;NRF1:0.80990523319;CUX2:0.804035698364;LMO2:0.800746079682;SOX17:0.792512088392;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.766193779888;EVI1:0.743786316711;HNF4A_NR2F1,2:0.728527281915;bHLH_family:0.72648939743;TOPORS:0.712090268301;YY1:0.659845819046;KLF4:0.645573621876;HOX{A4,D4}:0.607094271609;ATF4:0.599033227078;HOX{A6,A7,B6,B7}:0.59428853378;HNF1A:0.588198452907;IKZF2:0.58705911603;CRX:0.543870066214;ZBTB6:0.509798340565;AIRE:0.504968355821;CDC5L:0.492158962808;FOXD3:0.462479351448;GTF2I:0.433339007096;HAND1,2:0.42608743753;DBP:0.389762138852;BREu{core}:0.383025776357;PAX5:0.37804713258;UFEwm:0.377048286471;HOX{A5,B5}:0.370325669369;MTF1:0.36761549697;STAT5{A,B}:0.364216784206;ESRRA:0.350924993502;EN1,2:0.332055982934;ELK1,4_GABP{A,B1}:0.330848470314;HIC1:0.277059373602;MYB:0.272003601345;GATA6:0.230095503906;ZFP161:0.213415968161;REST:0.202629186776;TBX4,5:0.181921390281;RXR{A,B,G}:0.168052299803;TP53:0.164134107784;PRRX1,2:0.153704421781;TFAP2B:0.153549449701;ADNP_IRX_SIX_ZHX:0.14384042399;EGR1..3:0.140780943439;SREBF1,2:0.125661806828;POU3F1..4:0.1160541346;PRDM1:0.0843910086327;ESR1:0.0796133302883;NHLH1,2:0.0546038451503;GCM1,2:0.0499230202548;HMX1:0.0296527937639;GTF2A1,2:0.0188282177088;ALX1:-0.00120398185807;LHX3,4:-0.00637135312959;HSF1,2:-0.0159970374947;MTE{core}:-0.0192397457558;ZNF148:-0.0256951808751;NR1H4:-0.0270009673295;FOX{I1,J2}:-0.0281358022303;FOXN1:-0.0299763739653;NKX2-1,4:-0.0734134139379;RFX1:-0.0808076494413;IKZF1:-0.0831218683397;MYFfamily:-0.0865719334428;PAX2:-0.0995604744603;PPARG:-0.104334312122;ZNF423:-0.127304875408;JUN:-0.139042595329;MED-1{core}:-0.174410301907;FOXA2:-0.19100423918;ARID5B:-0.198904782778;POU6F1:-0.201425872472;GATA4:-0.203450618026;FOX{F1,F2,J1}:-0.219271824711;TEAD1:-0.234414549697;MYBL2:-0.245030978653;NANOG{mouse}:-0.250364619523;RXRA_VDR{dimer}:-0.252786519725;GFI1B:-0.254307821601;CDX1,2,4:-0.264789327986;PAX8:-0.294103923428;PITX1..3:-0.315432530281;XBP1:-0.315449561348;ATF2:-0.332204518009;ALX4:-0.334940323368;NKX3-2:-0.337384045252;NR5A1,2:-0.341528889897;SRF:-0.355069010515;CREB1:-0.355458707522;FOXL1:-0.356666764897;NFE2L2:-0.357022866792;NFKB1_REL_RELA:-0.382962001616;NKX6-1,2:-0.394315158284;TFCP2:-0.415560621524;SOX5:-0.421823170895;ATF5_CREB3:-0.454639913221;FOXP1:-0.464979824549;AHR_ARNT_ARNT2:-0.473303081289;TFAP4:-0.478651768251;MEF2{A,B,C,D}:-0.501128886997;TFAP2{A,C}:-0.519469537303;FOX{D1,D2}:-0.526514738927;NFE2:-0.53440677663;HES1:-0.539060620787;TEF:-0.544070269017;FOSL2:-0.557315213861;PAX3,7:-0.580454731392;SPI1:-0.587145814606;BACH2:-0.592739733808;FOXQ1:-0.593569850027;ZBTB16:-0.609368292624;FOS_FOS{B,L1}_JUN{B,D}:-0.609384729959;HMGA1,2:-0.614505090286;BPTF:-0.665761241545;NKX2-2,8:-0.666537057686;NFE2L1:-0.699321689113;AR:-0.700791534639;HLF:-0.729049515838;RUNX1..3:-0.732500982194;NFIX:-0.770685878451;FOXP3:-0.777763625822;SPIB:-0.785744457202;NR3C1:-0.791212274434;RFX2..5_RFXANK_RFXAP:-0.855820512281;NKX3-1:-0.868355364908;ATF6:-0.885560226141;DMAP1_NCOR{1,2}_SMARC:-0.900162037289;FOXO1,3,4:-0.91166968923;ELF1,2,4:-0.913163611234;NR6A1:-0.921250234341;ETS1,2:-0.96311963387;CEBPA,B_DDIT3:-0.964984781761;POU1F1:-0.981131768474;SPZ1:-1.01182505975;ZNF238:-1.03166923847;TLX2:-1.0353850762;IRF7:-1.07213939983;TLX1..3_NFIC{dimer}:-1.09684241987;PAX4:-1.12464132023;NFIL3:-1.14397994119;GLI1..3:-1.1509694216;SMAD1..7,9:-1.16460526812;TAL1_TCF{3,4,12}:-1.1764865461;TGIF1:-1.19831612678;HBP1_HMGB_SSRP1_UBTF:-1.22065876439;NFATC1..3:-1.2355185795;IRF1,2:-1.26354983107;GZF1:-1.27786539515;EP300:-1.30736385674;MAFB:-1.33862241366;HOXA9_MEIS1:-1.3416254123;PAX6:-1.37805571035;STAT2,4,6:-1.49697227591;PDX1:-1.6188711568 | |top_motifs=OCT4_SOX2{dimer}:2.71159397879;PATZ1:2.39988933635;T:2.12066871191;SP1:2.06724247944;GFI1:1.68874997617;SNAI1..3:1.56131167173;NFY{A,B,C}:1.55644360843;PBX1:1.48593665526;RBPJ:1.43943019902;SOX{8,9,10}:1.42775405161;E2F1..5:1.41676695197;XCPE1{core}:1.40767022087;NANOG:1.35976761428;PAX1,9:1.3477811251;TBP:1.31357940391;MAZ:1.30291355005;MZF1:1.28963388314;POU5F1:1.2583472212;FOXM1:1.20962065772;POU2F1..3:1.18504802;ZIC1..3:1.15145367475;RREB1:1.15053725763;EBF1:1.13698914806;MYOD1:1.13322839371;ZEB1:1.10831413762;VSX1,2:1.08500676794;SOX2:1.04856361771;ZNF143:1.04284247439;ZNF384:1.04046968846;RORA:0.999479807872;ONECUT1,2:0.992938577222;TFDP1:0.983098778356;HIF1A:0.928116226376;STAT1,3:0.927609434047;LEF1_TCF7_TCF7L1,2:0.90672615341;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.865527305102;NKX2-3_NKX2-5:0.845587603302;NRF1:0.80990523319;CUX2:0.804035698364;LMO2:0.800746079682;SOX17:0.792512088392;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.766193779888;EVI1:0.743786316711;HNF4A_NR2F1,2:0.728527281915;bHLH_family:0.72648939743;TOPORS:0.712090268301;YY1:0.659845819046;KLF4:0.645573621876;HOX{A4,D4}:0.607094271609;ATF4:0.599033227078;HOX{A6,A7,B6,B7}:0.59428853378;HNF1A:0.588198452907;IKZF2:0.58705911603;CRX:0.543870066214;ZBTB6:0.509798340565;AIRE:0.504968355821;CDC5L:0.492158962808;FOXD3:0.462479351448;GTF2I:0.433339007096;HAND1,2:0.42608743753;DBP:0.389762138852;BREu{core}:0.383025776357;PAX5:0.37804713258;UFEwm:0.377048286471;HOX{A5,B5}:0.370325669369;MTF1:0.36761549697;STAT5{A,B}:0.364216784206;ESRRA:0.350924993502;EN1,2:0.332055982934;ELK1,4_GABP{A,B1}:0.330848470314;HIC1:0.277059373602;MYB:0.272003601345;GATA6:0.230095503906;ZFP161:0.213415968161;REST:0.202629186776;TBX4,5:0.181921390281;RXR{A,B,G}:0.168052299803;TP53:0.164134107784;PRRX1,2:0.153704421781;TFAP2B:0.153549449701;ADNP_IRX_SIX_ZHX:0.14384042399;EGR1..3:0.140780943439;SREBF1,2:0.125661806828;POU3F1..4:0.1160541346;PRDM1:0.0843910086327;ESR1:0.0796133302883;NHLH1,2:0.0546038451503;GCM1,2:0.0499230202548;HMX1:0.0296527937639;GTF2A1,2:0.0188282177088;ALX1:-0.00120398185807;LHX3,4:-0.00637135312959;HSF1,2:-0.0159970374947;MTE{core}:-0.0192397457558;ZNF148:-0.0256951808751;NR1H4:-0.0270009673295;FOX{I1,J2}:-0.0281358022303;FOXN1:-0.0299763739653;NKX2-1,4:-0.0734134139379;RFX1:-0.0808076494413;IKZF1:-0.0831218683397;MYFfamily:-0.0865719334428;PAX2:-0.0995604744603;PPARG:-0.104334312122;ZNF423:-0.127304875408;JUN:-0.139042595329;MED-1{core}:-0.174410301907;FOXA2:-0.19100423918;ARID5B:-0.198904782778;POU6F1:-0.201425872472;GATA4:-0.203450618026;FOX{F1,F2,J1}:-0.219271824711;TEAD1:-0.234414549697;MYBL2:-0.245030978653;NANOG{mouse}:-0.250364619523;RXRA_VDR{dimer}:-0.252786519725;GFI1B:-0.254307821601;CDX1,2,4:-0.264789327986;PAX8:-0.294103923428;PITX1..3:-0.315432530281;XBP1:-0.315449561348;ATF2:-0.332204518009;ALX4:-0.334940323368;NKX3-2:-0.337384045252;NR5A1,2:-0.341528889897;SRF:-0.355069010515;CREB1:-0.355458707522;FOXL1:-0.356666764897;NFE2L2:-0.357022866792;NFKB1_REL_RELA:-0.382962001616;NKX6-1,2:-0.394315158284;TFCP2:-0.415560621524;SOX5:-0.421823170895;ATF5_CREB3:-0.454639913221;FOXP1:-0.464979824549;AHR_ARNT_ARNT2:-0.473303081289;TFAP4:-0.478651768251;MEF2{A,B,C,D}:-0.501128886997;TFAP2{A,C}:-0.519469537303;FOX{D1,D2}:-0.526514738927;NFE2:-0.53440677663;HES1:-0.539060620787;TEF:-0.544070269017;FOSL2:-0.557315213861;PAX3,7:-0.580454731392;SPI1:-0.587145814606;BACH2:-0.592739733808;FOXQ1:-0.593569850027;ZBTB16:-0.609368292624;FOS_FOS{B,L1}_JUN{B,D}:-0.609384729959;HMGA1,2:-0.614505090286;BPTF:-0.665761241545;NKX2-2,8:-0.666537057686;NFE2L1:-0.699321689113;AR:-0.700791534639;HLF:-0.729049515838;RUNX1..3:-0.732500982194;NFIX:-0.770685878451;FOXP3:-0.777763625822;SPIB:-0.785744457202;NR3C1:-0.791212274434;RFX2..5_RFXANK_RFXAP:-0.855820512281;NKX3-1:-0.868355364908;ATF6:-0.885560226141;DMAP1_NCOR{1,2}_SMARC:-0.900162037289;FOXO1,3,4:-0.91166968923;ELF1,2,4:-0.913163611234;NR6A1:-0.921250234341;ETS1,2:-0.96311963387;CEBPA,B_DDIT3:-0.964984781761;POU1F1:-0.981131768474;SPZ1:-1.01182505975;ZNF238:-1.03166923847;TLX2:-1.0353850762;IRF7:-1.07213939983;TLX1..3_NFIC{dimer}:-1.09684241987;PAX4:-1.12464132023;NFIL3:-1.14397994119;GLI1..3:-1.1509694216;SMAD1..7,9:-1.16460526812;TAL1_TCF{3,4,12}:-1.1764865461;TGIF1:-1.19831612678;HBP1_HMGB_SSRP1_UBTF:-1.22065876439;NFATC1..3:-1.2355185795;IRF1,2:-1.26354983107;GZF1:-1.27786539515;EP300:-1.30736385674;MAFB:-1.33862241366;HOXA9_MEIS1:-1.3416254123;PAX6:-1.37805571035;STAT2,4,6:-1.49697227591;PDX1:-1.6188711568 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12627-134E8;search_select_hide=table117:FF:12627-134E8 | |||
}} | }} | ||
Latest revision as of 18:41, 4 June 2020
| Name: | H9 Embryoid body cells, melanocytic induction |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12822 |
| Sample type: | time courses |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12822
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12822
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0626 |
| 10 | 10 | 0.0107 |
| 100 | 100 | 0.905 |
| 101 | 101 | 0.271 |
| 102 | 102 | 0.834 |
| 103 | 103 | 0.192 |
| 104 | 104 | 0.718 |
| 105 | 105 | 0.167 |
| 106 | 106 | 0.033 |
| 107 | 107 | 0.362 |
| 108 | 108 | 0.667 |
| 109 | 109 | 0.216 |
| 11 | 11 | 0.096 |
| 110 | 110 | 0.265 |
| 111 | 111 | 0.0103 |
| 112 | 112 | 0.328 |
| 113 | 113 | 0.502 |
| 114 | 114 | 0.00844 |
| 115 | 115 | 0.258 |
| 116 | 116 | 0.858 |
| 117 | 117 | 0.101 |
| 118 | 118 | 0.701 |
| 119 | 119 | 0.171 |
| 12 | 12 | 0.972 |
| 120 | 120 | 0.409 |
| 121 | 121 | 0.966 |
| 122 | 122 | 0.885 |
| 123 | 123 | 0.0108 |
| 124 | 124 | 0.15 |
| 125 | 125 | 0.563 |
| 126 | 126 | 0.68 |
| 127 | 127 | 0.555 |
| 128 | 128 | 0.494 |
| 129 | 129 | 0.464 |
| 13 | 13 | 0.595 |
| 130 | 130 | 0.147 |
| 131 | 131 | 0.748 |
| 132 | 132 | 0.952 |
| 133 | 133 | 0.143 |
| 134 | 134 | 0.501 |
| 135 | 135 | 0.0508 |
| 136 | 136 | 0.206 |
| 137 | 137 | 0.248 |
| 138 | 138 | 0.21 |
| 139 | 139 | 0.0103 |
| 14 | 14 | 0.573 |
| 140 | 140 | 0.0251 |
| 141 | 141 | 0.692 |
| 142 | 142 | 0.965 |
| 143 | 143 | 0.00507 |
| 144 | 144 | 0.746 |
| 145 | 145 | 0.314 |
| 146 | 146 | 0.42 |
| 147 | 147 | 0.775 |
| 148 | 148 | 0.00294 |
| 149 | 149 | 0.0547 |
| 15 | 15 | 0.0459 |
| 150 | 150 | 0.498 |
| 151 | 151 | 0.0629 |
| 152 | 152 | 0.612 |
| 153 | 153 | 0.382 |
| 154 | 154 | 0.126 |
| 155 | 155 | 0.992 |
| 156 | 156 | 0.595 |
| 157 | 157 | 0.534 |
| 158 | 158 | 0.444 |
| 159 | 159 | 0.822 |
| 16 | 16 | 0.388 |
| 160 | 160 | 0.424 |
| 161 | 161 | 0.556 |
| 162 | 162 | 0.425 |
| 163 | 163 | 0.418 |
| 164 | 164 | 0.171 |
| 165 | 165 | 0.166 |
| 166 | 166 | 0.773 |
| 167 | 167 | 0.0116 |
| 168 | 168 | 0.364 |
| 169 | 169 | 0.00167 |
| 17 | 17 | 0.28 |
| 18 | 18 | 0.249 |
| 19 | 19 | 0.237 |
| 2 | 2 | 0.73 |
| 20 | 20 | 0.875 |
| 21 | 21 | 0.507 |
| 22 | 22 | 0.275 |
| 23 | 23 | 0.0518 |
| 24 | 24 | 0.716 |
| 25 | 25 | 0.376 |
| 26 | 26 | 0.119 |
| 27 | 27 | 0.622 |
| 28 | 28 | 0.671 |
| 29 | 29 | 0.662 |
| 3 | 3 | 0.0562 |
| 30 | 30 | 0.584 |
| 31 | 31 | 0.973 |
| 32 | 32 | 0.131 |
| 33 | 33 | 0.709 |
| 34 | 34 | 0.912 |
| 35 | 35 | 0.297 |
| 36 | 36 | 0.0423 |
| 37 | 37 | 0.218 |
| 38 | 38 | 0.321 |
| 39 | 39 | 0.578 |
| 4 | 4 | 0.837 |
| 40 | 40 | 0.739 |
| 41 | 41 | 0.127 |
| 42 | 42 | 0.208 |
| 43 | 43 | 0.113 |
| 44 | 44 | 0.838 |
| 45 | 45 | 0.798 |
| 46 | 46 | 0.0511 |
| 47 | 47 | 0.479 |
| 48 | 48 | 0.426 |
| 49 | 49 | 0.072 |
| 5 | 5 | 0.0872 |
| 50 | 50 | 0.908 |
| 51 | 51 | 0.748 |
| 52 | 52 | 0.553 |
| 53 | 53 | 0.168 |
| 54 | 54 | 0.473 |
| 55 | 55 | 0.0121 |
| 56 | 56 | 0.602 |
| 57 | 57 | 0.273 |
| 58 | 58 | 0.0932 |
| 59 | 59 | 0.466 |
| 6 | 6 | 0.646 |
| 60 | 60 | 0.125 |
| 61 | 61 | 0.823 |
| 62 | 62 | 0.0314 |
| 63 | 63 | 0.1 |
| 64 | 64 | 0.256 |
| 65 | 65 | 0.138 |
| 66 | 66 | 0.623 |
| 67 | 67 | 0.224 |
| 68 | 68 | 0.413 |
| 69 | 69 | 0.703 |
| 7 | 7 | 0.376 |
| 70 | 70 | 0.00717 |
| 71 | 71 | 0.0329 |
| 72 | 72 | 0.493 |
| 73 | 73 | 0.124 |
| 74 | 74 | 0.154 |
| 75 | 75 | 0.207 |
| 76 | 76 | 0.322 |
| 77 | 77 | 0.352 |
| 78 | 78 | 0.506 |
| 79 | 79 | 0.343 |
| 8 | 8 | 0.0984 |
| 80 | 80 | 0.363 |
| 81 | 81 | 0.245 |
| 82 | 82 | 0.0695 |
| 83 | 83 | 0.352 |
| 84 | 84 | 0.851 |
| 85 | 85 | 0.0688 |
| 86 | 86 | 0.304 |
| 87 | 87 | 0.545 |
| 88 | 88 | 0.933 |
| 89 | 89 | 0.159 |
| 9 | 9 | 0.296 |
| 90 | 90 | 0.103 |
| 91 | 91 | 0.165 |
| 92 | 92 | 0.0432 |
| 93 | 93 | 0.267 |
| 94 | 94 | 0.0517 |
| 95 | 95 | 0.785 |
| 96 | 96 | 0.0172 |
| 97 | 97 | 0.641 |
| 98 | 98 | 0.207 |
| 99 | 99 | 0.481 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12822
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000532 human H9 Embryoid body cells 0 days after melanocytic induction sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000147 (pigment cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000034 (stem cell)
0000148 (melanocyte)
0002322 (embryonic stem cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101581 (embryonic stem cell line sample)
0000350 (experimentally modified sample)
0000334 (melanocytic induction sample)
0000380 (0 days sample)
0000400 (H9 embryonic stem cell line sample)
0100669 (embryonic cell line sample)
0000532 (human H9 Embryoid body cells 0 days after melanocytic induction sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
