FF:11898-125E8: Difference between revisions

Latest revision as of 18:27, 4 June 2020

Name:	Hep-2 cells mock treated, biol_rep1
Species:	Human (Homo sapiens)
Library ID:	CNhs13479
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	NA
dev stage	NA
sex	male
age	56
cell type	unclassifiable
cell line	Hep-2
company	NA
collaboration	Christine Wells (University of Queensland)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	3a
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005125

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13479		CAGE		DRX007782		DRR008654

Accession ID Hg19

Library id		BAM		CTSS
CNhs13479		DRZ000079		DRZ001464

Accession ID Hg38

Library id		BAM		CTSS
CNhs13479		DRZ011429		DRZ012814

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0122
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0.837
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.501
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0486
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0411
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.198
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.131
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0149
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.00443
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.0922
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.721
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.482
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.0229
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.74
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0486
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.00771
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.474
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.562
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0.168
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0486
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13479

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0534
MA0003.1	MA0003.1	0.866
MA0004.1	MA0004.1	0.123
MA0006.1	MA0006.1	0.562
MA0007.1	MA0007.1	0.304
MA0009.1	MA0009.1	0.592
MA0014.1	MA0014.1	0.704
MA0017.1	MA0017.1	0.642
MA0018.2	MA0018.2	0.899
MA0019.1	MA0019.1	0.968
MA0024.1	MA0024.1	6.96187e-8
MA0025.1	MA0025.1	0.127
MA0027.1	MA0027.1	0.805
MA0028.1	MA0028.1	1.39693e-6
MA0029.1	MA0029.1	0.54
MA0030.1	MA0030.1	0.494
MA0031.1	MA0031.1	0.187
MA0035.2	MA0035.2	0.599
MA0038.1	MA0038.1	0.882
MA0039.2	MA0039.2	0.057
MA0040.1	MA0040.1	0.403
MA0041.1	MA0041.1	0.358
MA0042.1	MA0042.1	0.43
MA0043.1	MA0043.1	0.111
MA0046.1	MA0046.1	0.437
MA0047.2	MA0047.2	0.888
MA0048.1	MA0048.1	0.0277
MA0050.1	MA0050.1	0.0771
MA0051.1	MA0051.1	0.697
MA0052.1	MA0052.1	0.00572
MA0055.1	MA0055.1	4.66797e-5
MA0057.1	MA0057.1	0.233
MA0058.1	MA0058.1	0.0457
MA0059.1	MA0059.1	0.00835
MA0060.1	MA0060.1	0.0277
MA0061.1	MA0061.1	0.0703
MA0062.2	MA0062.2	0.004
MA0065.2	MA0065.2	0.0159
MA0066.1	MA0066.1	0.722
MA0067.1	MA0067.1	0.231
MA0068.1	MA0068.1	0.00319
MA0069.1	MA0069.1	0.317
MA0070.1	MA0070.1	0.582
MA0071.1	MA0071.1	0.0585
MA0072.1	MA0072.1	0.608
MA0073.1	MA0073.1	0.169
MA0074.1	MA0074.1	0.565
MA0076.1	MA0076.1	4.2829e-5
MA0077.1	MA0077.1	0.949
MA0078.1	MA0078.1	0.19
MA0079.2	MA0079.2	0.56
MA0080.2	MA0080.2	3.31714e-8
MA0081.1	MA0081.1	0.267
MA0083.1	MA0083.1	0.00426
MA0084.1	MA0084.1	0.402
MA0087.1	MA0087.1	0.552
MA0088.1	MA0088.1	0.0159
MA0090.1	MA0090.1	0.00305
MA0091.1	MA0091.1	0.537
MA0092.1	MA0092.1	0.839
MA0093.1	MA0093.1	0.0771
MA0099.2	MA0099.2	0.00467
MA0100.1	MA0100.1	0.371
MA0101.1	MA0101.1	0.163
MA0102.2	MA0102.2	0.718
MA0103.1	MA0103.1	0.0452
MA0104.2	MA0104.2	0.00106
MA0105.1	MA0105.1	0.656
MA0106.1	MA0106.1	0.562
MA0107.1	MA0107.1	0.044
MA0108.2	MA0108.2	0.24
MA0111.1	MA0111.1	0.881
MA0112.2	MA0112.2	0.0388
MA0113.1	MA0113.1	0.865
MA0114.1	MA0114.1	0.0227
MA0115.1	MA0115.1	0.0467
MA0116.1	MA0116.1	0.404
MA0117.1	MA0117.1	0.787
MA0119.1	MA0119.1	0.751
MA0122.1	MA0122.1	0.94
MA0124.1	MA0124.1	0.841
MA0125.1	MA0125.1	0.398
MA0131.1	MA0131.1	0.298
MA0135.1	MA0135.1	0.898
MA0136.1	MA0136.1	8.2326e-4
MA0137.2	MA0137.2	0.0288
MA0138.2	MA0138.2	0.106
MA0139.1	MA0139.1	0.558
MA0140.1	MA0140.1	0.566
MA0141.1	MA0141.1	0.00458
MA0142.1	MA0142.1	0.863
MA0143.1	MA0143.1	0.0861
MA0144.1	MA0144.1	0.357
MA0145.1	MA0145.1	0.847
MA0146.1	MA0146.1	0.175
MA0147.1	MA0147.1	4.69236e-4
MA0148.1	MA0148.1	0.371
MA0149.1	MA0149.1	0.086
MA0150.1	MA0150.1	0.35
MA0152.1	MA0152.1	0.527
MA0153.1	MA0153.1	0.0285
MA0154.1	MA0154.1	0.531
MA0155.1	MA0155.1	0.242
MA0156.1	MA0156.1	0.138
MA0157.1	MA0157.1	0.17
MA0159.1	MA0159.1	0.166
MA0160.1	MA0160.1	0.0261
MA0162.1	MA0162.1	0.156
MA0163.1	MA0163.1	0.0549
MA0164.1	MA0164.1	0.331
MA0258.1	MA0258.1	0.747
MA0259.1	MA0259.1	0.0226

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13479

Novel motif	Logo	P-value
1	1	0.127
10	10	0.093
100	100	0.0237
101	101	0.194
102	102	0.904
103	103	0.835
104	104	0.887
105	105	0.183
106	106	0.0131
107	107	0.151
108	108	0.729
109	109	0.00141
11	11	0.995
110	110	0.291
111	111	0.713
112	112	0.349
113	113	0.00143
114	114	0.873
115	115	0.756
116	116	0.244
117	117	0.145
118	118	0.203
119	119	0.749
12	12	0.925
120	120	0.0518
121	121	0.506
122	122	0.176
123	123	0.206
124	124	0.687
125	125	0.901
126	126	0.837
127	127	0.274
128	128	1.72143e-4
129	129	0.357
13	13	1.03398e-4
130	130	0.434
131	131	0.4
132	132	0.5
133	133	0.181
134	134	0.949
135	135	0.0457
136	136	0.00347
137	137	0.223
138	138	0.711
139	139	0.0355
14	14	0.374
140	140	0.206
141	141	0.526
142	142	0.612
143	143	0.219
144	144	0.381
145	145	0.231
146	146	0.671
147	147	0.793
148	148	0.574
149	149	0.555
15	15	0.95
150	150	0.637
151	151	0.552
152	152	0.683
153	153	0.562
154	154	0.404
155	155	0.652
156	156	0.0311
157	157	0.117
158	158	0.114
159	159	0.218
16	16	0.937
160	160	0.418
161	161	0.629
162	162	0.851
163	163	0.294
164	164	0.0154
165	165	0.989
166	166	0.0899
167	167	0.237
168	168	0.255
169	169	0.29
17	17	0.847
18	18	0.249
19	19	0.853
2	2	0.497
20	20	0.105
21	21	0.418
22	22	0.886
23	23	0.00168
24	24	0.764
25	25	0.366
26	26	0.994
27	27	0.686
28	28	0.758
29	29	0.0268
3	3	0.61
30	30	0.44
31	31	0.521
32	32	0.133
33	33	0.157
34	34	0.194
35	35	0.776
36	36	0.172
37	37	0.329
38	38	0.942
39	39	0.97
4	4	0.201
40	40	0.018
41	41	0.107
42	42	0.954
43	43	0.418
44	44	0.0655
45	45	0.206
46	46	0.558
47	47	0.384
48	48	0.455
49	49	0.236
5	5	0.217
50	50	0.856
51	51	0.63
52	52	0.27
53	53	0.0855
54	54	0.484
55	55	0.0469
56	56	0.902
57	57	0.528
58	58	0.89
59	59	0.875
6	6	0.704
60	60	0.371
61	61	0.0454
62	62	0.903
63	63	0.548
64	64	0.778
65	65	0.407
66	66	0.529
67	67	0.773
68	68	0.511
69	69	0.96
7	7	0.0366
70	70	0.296
71	71	0.0533
72	72	0.817
73	73	0.318
74	74	0.0615
75	75	0.104
76	76	0.21
77	77	0.558
78	78	0.186
79	79	0.991
8	8	0.13
80	80	0.029
81	81	0.233
82	82	0.115
83	83	0.64
84	84	0.502
85	85	0.0189
86	86	0.9
87	87	0.00623
88	88	0.817
89	89	0.644
9	9	0.559
90	90	0.0363
91	91	0.0104
92	92	0.0728
93	93	0.29
94	94	0.419
95	95	0.00191
96	96	0.411
97	97	0.879
98	98	0.848
99	99	0.374

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13479

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011132 human Hep-2 cells mock treated sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001737 (larynx)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000072 (segment of respiratory tract)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0001004 (respiratory system)
0001557 (upper respiratory tract)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000343 (control treatment sample)
0000350 (experimentally modified sample)
0104978 (HEp-2 cell sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0011132 (human Hep-2 cells mock treated sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS007677
+|DRA_sample_Accession=CAGE@SAMD00005125
-|accession_numbers=CAGE;DRX007782;DRR008654;DRZ000079;DRZ001464
+|accession_numbers=CAGE;DRX007782;DRR008654;DRZ000079;DRZ001464;DRZ011429;DRZ012814
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001737,UBERON:0000064,UBERON:0004119,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000072,UBERON:0010317,UBERON:0000065,UBERON:0001004,UBERON:0001557
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
@@ Line 9: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr6:10415276..10415341,-!p2@TFAP2A!1.62!49.33!TFAP2A;;chr6:10415484..10415508,-!p3@TFAP2A!1.54!33.72!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.50!50.16!TFAP2A;;chr5:134369905..134369972,-!p1@PITX1!1.50!46.14!PITX1;;chr6:126240380..126240430,+!p2@NCOA7!1.46!71.22!NCOA7;;chr6:1312325..1312340,+!p1@FOXQ1!1.44!43.06!FOXQ1;;chr1:201979743..201979762,+!p1@ELF3!1.42!25.32!ELF3;;chr2:238592039..238592054,+!p4@LRRFIP1!1.42!25.08!LRRFIP1;;chr6:126240442..126240459,+!p4@NCOA7!1.34!26.38!NCOA7;;chr5:134369879..134369898,-!p2@PITX1!1.33!20.23!PITX1;;chr22:19748231..19748317,+!p1@TBX1!1.18!14.20!TBX1;;chr5:170736243..170736279,+!p1@TLX3!1.18!14.08!TLX3;;chr1:201979703..201979721,+!p2@ELF3!1.16!13.37!ELF3;;chr6:126240463..126240489,+!p6@NCOA7!1.15!14.79!NCOA7;;chr6:126240356..126240379,+!p7@NCOA7!1.12!15.02!NCOA7;;chr12:54380036..54380091,+!p4@HOXC10!1.11!11.83!HOXC10;;chr6:1389789..1389821,+!p1@FOXF2!1.10!16.09!FOXF2;;chr20:6748325..6748352,+!p1@BMP2!1.08!15.85!BMP2;;chr12:54378923..54378966,+!p1@HOXC10!1.08!11.00!HOXC10;;chr9:100615499..100615519,+!p1@FOXE1!1.07!10.88!FOXE1;;chr17:46682321..46682362,-!p1@HOXB6!1.05!10.17!HOXB6;;chr12:54380404..54380433,+!p3@HOXC10!1.02!9.58!HOXC10;;chr3:69915385..69915438,+!p3@MITF!1.02!9.58!MITF;;chr18:55102598..55102623,+!p1@ONECUT2!1.02!9.46!ONECUT2;;chrX:131624056..131624069,-!p2@MBNL3!1.01!12.54!MBNL3;;chr1:44513995..44514031,+!p1@KLF17!1.00!8.99!KLF17;;chr17:46687959..46688007,-!p2@HOXB7!0.99!12.30!HOXB7;;chr7:101917447..101917479,+!p4@CUX1!0.99!8.87!CUX1;;chr6:10412576..10412599,-!p5@TFAP2A!0.98!8.64!TFAP2A;;chr18:55102628..55102646,+!p2@ONECUT2!0.97!8.40!ONECUT2;;chr6:10412392..10412409,-!p4@TFAP2A!0.96!9.23!TFAP2A;;chr12:54379029..54379057,+!p2@HOXC10!0.96!8.16!HOXC10;;chr11:34663913..34663945,+!p6@EHF!0.93!7.57!EHF;;chr13:73633131..73633149,+!p1@KLF5!0.91!80.45!KLF5;;chr7:101917482..101917507,+!p6@CUX1!0.91!7.10!CUX1;;chr7:27224842..27224872,-!p1@HOXA11!0.91!7.10!HOXA11;;chr7:101917407..101917443,+!p3@CUX1!0.90!6.86!CUX1;;chr12:54332608..54332636,+!p1@HOXC13!0.89!6.74!HOXC13;;chr1:151804244..151804310,-!p1@RORC!0.89!6.74!RORC;;chr5:321810..321877,+!p1@AHRR!0.88!21.89!AHRR;;chr7:27239703..27239715,-!p1@HOXA13!0.86!6.27!HOXA13;;chr5:170736216..170736238,+!p2@TLX3!0.84!5.92!TLX3;;chr6:31126291..31126399,+!p1@TCF19!0.83!58.92!TCF19;;chr10:104155659..104155676,+!p4@NFKB2!0.83!7.34!NFKB2;;chr17:17726907..17726958,-!p2@SREBF1!0.82!37.38!SREBF1;;chr17:7492684..7492778,-!p2@SOX15!0.82!12.42!SOX15;;chr8:55370487..55370503,+!p1@SOX17!0.82!5.56!SOX17;;chr15:67418119..67418162,+!p5@SMAD3!0.81!6.15!SMAD3;;chr10:51572408..51572454,+!p3@NCOA4!0.79!32.89!NCOA4;;chr16:29818199..29818216,+!p11@MAZ!0.78!8.52!MAZ;;chr3:69915369..69915381,+!p4@MITF!0.78!4.97!MITF;;chr21:38071430..38071456,+!p1@SIM2!0.78!4.97!SIM2;;chr12:3068544..3068597,+!p1@TEAD4!0.77!32.18!TEAD4;;chrX:131623044..131623089,-!p1@MBNL3!0.77!22.24!MBNL3;;chr6:1389989..1390019,+!p2@FOXF2!0.76!4.73!FOXF2;;chr2:178129853..178129860,-!p14@NFE2L2!0.75!4.61!NFE2L2;;chr10:28034739..28034756,-!p1@MKX!0.75!4.61!MKX;;chr1:8938709..8938720,-!p3@ENO1!0.74!241.23!ENO1;;chr17:46688334..46688385,-!p1@HOXB7!0.74!6.74!HOXB7;;chr2:45236540..45236577,-!p1@SIX2!0.74!4.50!SIX2;;chr12:80084737..80084763,-!p3@PAWR!0.73!17.98!PAWR;;chr3:12330560..12330579,+!p1@PPARG!0.73!5.09!PPARG;;chr7:27224795..27224840,-!p2@HOXA11!0.72!4.26!HOXA11;;chrX:131623026..131623039,-!p5@MBNL3!0.72!4.26!MBNL3;;chr12:2986275..2986363,-!p1@FOXM1!0.71!46.38!FOXM1;;chr2:172967621..172967637,-!p1@DLX2!0.71!12.19!DLX2;;chr22:19746969..19746987,+!p2@TBX1!0.71!4.14!TBX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.71!4.14!HOXC5;;chr3:128206762..128206781,-!p2@GATA2!0.70!27.92!GATA2;;chr1:45805872..45805900,+!p2@TOE1!0.70!10.53!TOE1;;chr13:100623375..100623425,-!p1@ZIC5!0.70!4.02!ZIC5;;chr7:27239740..27239759,-!p2@HOXA13!0.70!4.02!HOXA13;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.70!4.02!SEBOX;;chr17:46806067..46806097,-!p1@HOXB13!0.70!4.02!HOXB13;;chr1:23885981..23886002,-!p1@ID3!0.69!792.42!ID3;;chr2:178128149..178128198,-!p2@NFE2L2!0.69!23.66!NFE2L2;;chr3:138665937..138665968,-!p1@FOXL2!0.69!3.90!FOXL2;;chr6:10419824..10419840,-!p9@TFAP2A!0.69!3.90!TFAP2A;;chr16:29818160..29818188,+!p6@MAZ!0.68!19.99!MAZ;;chr17:41277372..41277418,-!p1@BRCA1!0.68!15.62!BRCA1;;chr1:8934931..8934947,-!p4@ENO1!0.68!13.96!ENO1;;chr11:34664014..34664045,+!p4@EHF!0.68!3.79!EHF;;chr12:54393880..54393962,+!p1@HOXC9!0.68!3.79!HOXC9;;chr8:128748308..128748324,+!p2@MYC!0.67!119.25!MYC;;chr20:42295745..42295765,+!p1@MYBL2!0.67!70.16!MYBL2;;chr1:935398..935465,-!p2@HES4!0.67!8.28!HES4;;chrX:24169518..24169522,+!p8@ZFX!0.67!3.67!ZFX;;chr17:48072574..48072597,-!p1@DLX3!0.67!3.67!DLX3;;chr11:12696071..12696086,+!p3@TEAD1!0.66!4.97!TEAD1;;chrX:131624020..131624048,-!p9@MBNL3!0.66!4.50!MBNL3;;chr17:46687935..46687950,-!p3@HOXB7!0.66!3.55!HOXB7;;chr21:38071403..38071428,+!p2@SIM2!0.66!3.55!SIM2;;chr12:7079780..7079791,-!p2@PHB2!0.65!21.06!PHB2;;chr14:38064429..38064486,-!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@@ Line 40: / Line 41: @@
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@@ Line 49: / Line 60: @@
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 |sample_age=56
@@ Line 88: / Line 100: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11898-125E8;search_select_hide=table117:FF:11898-125E8
 }}

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FF:11898-125E8: Difference between revisions

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Latest revision as of 18:27, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0