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{{f5samples
{{f5samples
|id=FF:11896-125E6
|DRA_sample_Accession=CAGE@SAMD00005842
|name=Hep-2 cells treated with Streptococci strain JRS4, biol_rep3
|accession_numbers=CAGE;DRX007790;DRR008662;DRZ000087;DRZ001472;DRZ011437;DRZ012822
|sample_id=11896
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001737,UBERON:0000064,UBERON:0004119,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000072,UBERON:0010317,UBERON:0000065,UBERON:0001004,UBERON:0001557
|rna_tube_id=125E6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
|rna_box=125
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305
|rna_position=E6
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000632,FF:0104978,FF:0000639,FF:0100297,FF:0101120,FF:0011134
|sample_cell_lot=
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=2c
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr6:10415276..10415341,-!p2@TFAP2A!1.56!43.09!TFAP2A;;chr1:201979743..201979762,+!p1@ELF3!1.52!32.32!ELF3;;chr2:238592039..238592054,+!p4@LRRFIP1!1.51!31.55!LRRFIP1;;chr6:10415484..10415508,-!p3@TFAP2A!1.44!26.55!TFAP2A;;chr5:134369905..134369972,-!p1@PITX1!1.39!35.78!PITX1;;chr6:126240380..126240430,+!p2@NCOA7!1.37!56.56!NCOA7;;chr12:52445218..52445237,+!p1@NR4A1!1.35!262.78!NR4A1;;chr6:10412600..10412637,-!p1@TFAP2A!1.35!35.01!TFAP2A;;chr5:134369879..134369898,-!p2@PITX1!1.31!19.24!PITX1;;chr6:126240442..126240459,+!p4@NCOA7!1.28!22.70!NCOA7;;chr1:201979703..201979721,+!p2@ELF3!1.20!15.01!ELF3;;chr6:1312325..1312340,+!p1@FOXQ1!1.19!23.85!FOXQ1;;chr6:126240463..126240489,+!p6@NCOA7!1.18!15.77!NCOA7;;chr12:54380036..54380091,+!p4@HOXC10!1.07!10.77!HOXC10;;chr12:54380404..54380433,+!p3@HOXC10!1.06!10.39!HOXC10;;chr22:19748231..19748317,+!p1@TBX1!1.06!10.39!TBX1;;chr5:170736243..170736279,+!p1@TLX3!1.06!10.39!TLX3;;chr17:46687959..46688007,-!p2@HOXB7!1.05!14.24!HOXB7;;chr9:100615499..100615519,+!p1@FOXE1!1.03!9.62!FOXE1;;chr1:44513995..44514031,+!p1@KLF17!1.03!9.62!KLF17;;chr18:55102598..55102623,+!p1@ONECUT2!1.01!9.23!ONECUT2;;chr18:55102628..55102646,+!p2@ONECUT2!0.98!8.46!ONECUT2;;chrX:131624056..131624069,-!p2@MBNL3!0.96!11.16!MBNL3;;chr6:126240356..126240379,+!p7@NCOA7!0.96!10.00!NCOA7;;chr7:101917447..101917479,+!p4@CUX1!0.96!8.08!CUX1;;chr7:101917482..101917507,+!p6@CUX1!0.94!7.69!CUX1;;chr12:72056800..72056834,+!p1@THAP2!0.92!10.00!THAP2;;chr17:7492684..7492778,-!p2@SOX15!0.91!15.39!SOX15;;chr10:104155659..104155676,+!p4@NFKB2!0.90!8.85!NFKB2;;chr6:10412392..10412409,-!p4@TFAP2A!0.90!8.08!TFAP2A;;chr13:73633131..73633149,+!p1@KLF5!0.88!73.87!KLF5;;chr6:10412576..10412599,-!p5@TFAP2A!0.88!6.54!TFAP2A;;chr17:17726907..17726958,-!p2@SREBF1!0.87!41.94!SREBF1;;chr3:69915385..69915438,+!p3@MITF!0.85!6.16!MITF;;chr9:102584262..102584276,+!p1@NR4A3!0.83!13.47!NR4A3;;chr6:1389789..1389821,+!p1@FOXF2!0.83!8.08!FOXF2;;chr11:34663913..34663945,+!p6@EHF!0.83!5.77!EHF;;chr5:321810..321877,+!p1@AHRR!0.82!18.85!AHRR;;chr20:6748325..6748352,+!p1@BMP2!0.81!8.08!BMP2;;chr21:38071430..38071456,+!p1@SIM2!0.81!5.39!SIM2;;chr7:101917407..101917443,+!p3@CUX1!0.81!5.39!CUX1;;chr7:27224842..27224872,-!p1@HOXA11!0.81!5.39!HOXA11;;chr12:54379029..54379057,+!p2@HOXC10!0.81!5.39!HOXC10;;chrX:70503529..70503549,+!p2@NONO!0.80!30.78!NONO;;chr1:8934931..8934947,-!p4@ENO1!0.80!18.85!ENO1;;chr12:72056773..72056796,+!p3@THAP2!0.79!6.93!THAP2;;chr9:102584159..102584174,+!p2@NR4A3!0.78!9.62!NR4A3;;chr8:55370487..55370503,+!p1@SOX17!0.78!5.00!SOX17;;chr10:28034739..28034756,-!p1@MKX!0.78!5.00!MKX;;chr12:54378923..54378966,+!p1@HOXC10!0.78!5.00!HOXC10;;chr1:151804244..151804310,-!p1@RORC!0.78!5.00!RORC;;chr17:46682321..46682362,-!p1@HOXB6!0.78!5.00!HOXB6;;chrX:131623044..131623089,-!p1@MBNL3!0.77!22.32!MBNL3;;chr16:29818199..29818216,+!p11@MAZ!0.77!8.46!MAZ;;chr1:45805872..45805900,+!p2@TOE1!0.76!12.31!TOE1;;chr1:8938709..8938720,-!p3@ENO1!0.75!247.39!ENO1;;chr20:42295745..42295765,+!p1@MYBL2!0.75!84.64!MYBL2;;chr17:8027418..8027432,-!p1@HES7!0.75!4.62!HES7;;chr12:3068544..3068597,+!p1@TEAD4!0.74!30.01!TEAD4;;chr6:31126291..31126399,+!p1@TCF19!0.73!46.17!TCF19;;chr12:7079780..7079791,-!p2@PHB2!0.72!24.62!PHB2;;chrX:107019163..107019179,-!p7@TSC22D3!0.72!5.00!TSC22D3;;chr12:54380112..54380126,+!p5@HOXC10!0.72!4.23!HOXC10;;chr2:157189180..157189290,-!p1@NR4A2!0.71!24.24!NR4A2;;chr1:935398..935465,-!p2@HES4!0.71!9.23!HES4;;chr20:42295713..42295738,+!p2@MYBL2!0.70!26.55!MYBL2;;chr10:51572408..51572454,+!p3@NCOA4!0.70!26.16!NCOA4;;chr3:12330560..12330579,+!p1@PPARG!0.69!4.62!PPARG;;chr2:45236540..45236577,-!p1@SIX2!0.69!3.85!SIX2;;chr3:128207349..128207386,-!p3@GATA2!0.69!3.85!GATA2;;chr3:69915369..69915381,+!p4@MITF!0.69!3.85!MITF;;chr9:126774018..126774055,+!p1@LHX2!0.69!3.85!LHX2;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.69!3.85!SEBOX;;chr3:128206762..128206781,-!p2@GATA2!0.66!25.78!GATA2;;chr2:172967621..172967637,-!p1@DLX2!0.66!10.77!DLX2;;chr17:41277372..41277418,-!p1@BRCA1!0.65!14.24!BRCA1;;chr6:10420285..10420304,-!p18@TFAP2A!0.65!3.46!TFAP2A;;chr11:34664014..34664045,+!p4@EHF!0.65!3.46!EHF;;chr12:54379477..54379498,+!p5@HOXC5!0.65!3.46!HOXC5;;chr12:2986275..2986363,-!p1@FOXM1!0.64!39.24!FOXM1;;chr22:42229210..42229229,+!p3@SREBF2!0.64!8.85!SREBF2;;chr1:8939265..8939367,-!p5@ENO1!0.64!7.69!ENO1;;chr2:46524897..46524911,+!p2@EPAS1!0.63!10.39!EPAS1;;chr10:35484053..35484076,+!p1@CREM!0.62!8.85!CREM;;chrX:107018969..107019024,-!p6@TSC22D3!0.62!4.62!TSC22D3;;chrX:131622958..131622978,-!p3@MBNL3!0.62!4.23!MBNL3;;chr16:29818160..29818188,+!p6@MAZ!0.61!16.93!MAZ;;chr3:141087393..141087426,+!p3@ZBTB38!0.61!14.24!ZBTB38;;chr17:46687935..46687950,-!p3@HOXB7!0.61!3.08!HOXB7;;chr17:46806067..46806097,-!p1@HOXB13!0.61!3.08!HOXB13;;chr17:7493405..7493419,-!p1@SOX15!0.61!3.08!SOX15;;chrX:131623026..131623039,-!p5@MBNL3!0.61!3.08!MBNL3;;chr12:52448420..52448460,+!p5@NR4A1!0.61!3.08!NR4A1;;chr12:54332608..54332636,+!p1@HOXC13!0.61!3.08!HOXC13;;chr12:54379136..54379150,+!p4@HOXC5!0.61!3.08!HOXC5;;chr5:170736216..170736238,+!p2@TLX3!0.61!3.08!TLX3;;chr8:145669791..145669834,-!p1@TONSL!0.60!10.00!TONSL;;chr18:45457909..45457939,-!p8@SMAD2!0.60!3.85!SMAD2;;chr12:80084737..80084763,-!p3@PAWR!0.59!12.70!PAWR;;chr17:41623692..41623715,-!p1@ETV4!0.58!14.24!ETV4;;chr6:20402102..20402152,+!p1@E2F3!0.58!13.85!E2F3;;chr11:3400340..3400422,-!p1@ZNF195!0.57!53.48!ZNF195;;chr1:161736038..161736056,+!p4@ATF6!0.57!7.31!ATF6;;chr17:46688334..46688385,-!p1@HOXB7!0.57!4.23!HOXB7;;chr20:51588873..51588953,+!p1@TSHZ2!0.57!3.85!TSHZ2;;chrX:131624020..131624048,-!p9@MBNL3!0.57!3.46!MBNL3;;chr15:67418119..67418162,+!p5@SMAD3!0.57!3.08!SMAD3;;chr12:72056749..72056767,+!p6@THAP2!0.57!3.08!THAP2;;chr12:52448213..52448262,+!p6@NR4A1!0.57!2.69!NR4A1;;chr12:54393880..54393962,+!p1@HOXC9!0.57!2.69!HOXC9;;chr19:54041669..54041697,+!p2@ZNF331!0.57!2.69!ZNF331;;chr6:126240490..126240501,+!p11@NCOA7!0.57!2.69!NCOA7;;chr1:164528410..164528428,+!p1@PBX1!0.56!24.62!PBX1;;chr20:32274179..32274213,-!p1@E2F1!0.56!21.55!E2F1;;chrX:131623982..131624011,-!p6@MBNL3!0.56!4.23!MBNL3;;chr15:67418047..67418093,+!p4@SMAD3!0.55!3.46!SMAD3;;chr12:115121962..115121987,-!p1@TBX3!0.52!25.01!TBX3;;chr20:32274150..32274166,-!p2@E2F1!0.52!5.00!E2F1;;chr15:90294062..90294079,-!p2@MESP1!0.52!2.31!MESP1;;chr17:36105074..36105086,-!p2@HNF1B!0.52!2.31!HNF1B;;chr17:46806098..46806118,-!p3@HOXB13!0.52!2.31!HOXB13;;chr19:12348371..12348386,-!p5@ZNF44!0.52!2.31!ZNF44;;chr19:3574157..3574180,+!p4@HMG20B!0.52!2.31!HMG20B;;chr5:134369973..134369984,-!p3@PITX1!0.52!2.31!PITX1;;chr6:10412477..10412490,-!p10@TFAP2A!0.52!2.31!TFAP2A;;chr6:10419824..10419840,-!p9@TFAP2A!0.52!2.31!TFAP2A;;chr12:19592405..19592492,+!p2@AEBP2!0.51!25.01!AEBP2;;chr10:35415951..35415975,+!p8@CREM!0.51!3.46!CREM;;chr3:141087339..141087387,+!p2@ZBTB38!0.50!28.86!ZBTB38;;chr2:75937794..75937867,-!p2@GCFC2!0.50!5.77!GCFC2;;chr1:8938736..8938756,-!p1@ENO1!0.49!3076.05!ENO1;;chr11:47279504..47279563,+!p1@NR1H3!0.49!5.77!NR1H3;;chr8:67525443..67525459,-!p2@MYBL1!0.49!3.46!MYBL1;;chr6:43138999..43139017,+!p2@SRF!0.48!15.77!SRF;;chr17:47492252..47492265,-!p2@PHB!0.48!10.77!PHB;;chr18:47814010..47814021,-!p3@CXXC1!0.48!3.85!CXXC1;;chr2:85981222..85981259,+!p2@ATOH8!0.48!3.85!ATOH8;;chr1:8926441..8926473,-!p10@ENO1!0.48!3.46!ENO1;;chr1:23885981..23886002,-!p1@ID3!0.47!473.24!ID3;;chr5:34929677..34929789,+!p1@DNAJC21!0.47!78.10!DNAJC21;;chr1:23857698..23857733,-!p1@E2F2!0.47!4.23!E2F2;;chr2:239756739..239756755,+!p2@TWIST2!0.47!3.85!TWIST2;;chr17:17726892..17726903,-!p6@SREBF1!0.47!2.31!SREBF1;;chr17:48045917..48045977,+!p1@DLX4!0.47!1.92!DLX4;;chr17:48072574..48072597,-!p1@DLX3!0.47!1.92!DLX3;;chr2:63277948..63277974,+!p1@OTX1!0.47!1.92!OTX1;;chr3:138665937..138665968,-!p1@FOXL2!0.47!1.92!FOXL2;;chr10:104155680..104155687,+!p6@NFKB2!0.47!1.92!NFKB2;;chr12:3068634..3068656,+!p5@TEAD4!0.47!1.92!TEAD4;;chr12:51158359..51158395,+!p4@ATF1!0.47!1.92!ATF1;;chr12:54366975..54367001,+!p1@HOXC11!0.47!1.92!HOXC11;;chr12:54394416..54394467,+!p5@HOXC9!0.47!1.92!HOXC9;;chr14:37051798..37051831,-!p1@NKX2-8!0.47!1.92!NKX2-8;;chr5:134369643..134369675,-!p4@PITX1!0.47!1.92!PITX1;;chr6:10415263..10415274,-!p8@TFAP2A!0.47!1.92!TFAP2A;;chr6:126240542..126240553,+!p14@NCOA7!0.47!1.92!NCOA7;;chr6:1389989..1390019,+!p2@FOXF2!0.47!1.92!FOXF2;;chr7:27239740..27239759,-!p2@HOXA13!0.47!1.92!HOXA13;;chr7:73038839..73038862,-!p1@MLXIPL!0.47!1.92!MLXIPL;;chr9:102584278..102584285,+!p5@NR4A3!0.47!1.92!NR4A3;;chr14:55493763..55493824,-!p1@WDHD1!0.46!19.24!WDHD1;;chr10:104155480..104155534,+!p2@NFKB2!0.46!16.54!NFKB2;;chr18:45457423..45457468,-!p5@SMAD2!0.46!9.23!SMAD2;;chr1:23857325..23857416,-!p2@E2F2!0.46!2.31!E2F2;;chr6:20402070..20402082,+!p5@E2F3!0.46!2.31!E2F3;;chr16:29817789..29817838,+!p2@MAZ!0.44!33.86!MAZ;;chr2:178128149..178128198,-!p2@NFE2L2!0.44!12.70!NFE2L2;;chr1:45805813..45805859,+!p1@TOE1!0.44!10.77!TOE1;;chr12:3069037..3069119,+!p2@TEAD4!0.44!8.08!TEAD4;;chr2:239756671..239756732,+!p1@TWIST2!0.44!7.31!TWIST2;;chr8:67525473..67525518,-!p1@MYBL1!0.44!5.00!MYBL1;;chr1:249132462..249132481,+!p6@ZNF672!0.44!3.46!ZNF672;;chr1:212782094..212782109,+!p1@ATF3!0.43!66.56!ATF3;;chr6:144329384..144329405,-!p1@PLAGL1!0.43!27.70!PLAGL1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.43!21.16!PPP1R13L;;chr14:62213827..62213853,+!p6@HIF1A!0.43!2.69!HIF1A;;chr9:99180662..99180690,-!p2@ZNF367!0.43!2.69!ZNF367;;chr2:74375081..74375092,-!p2@BOLA3!0.42!4.23!BOLA3;;chr3:24536253..24536328,-!p1@THRB!0.42!3.85!THRB;;chr4:87857474..87857489,+!p7@AFF1!0.42!3.46!AFF1;;chrX:70504244..70504278,+!p4@NONO!0.42!3.08!NONO;;chr16:54320101..54320125,-!p4@IRX3!0.42!2.69!IRX3;;chr16:54964740..54964789,+!p1@IRX5!0.42!2.69!IRX5;;chr16:54320617..54320643,-!p3@IRX3!0.42!2.31!IRX3;;chr7:1577111..1577132,+!p4@MAFK!0.42!1.92!MAFK;;chr12:2986206..2986258,-!p2@FOXM1!0.41!13.47!FOXM1;;chr16:1429627..1429662,-!p2@UNKL!0.41!6.16!UNKL;;chr1:8923998..8924033,-!p8@ENO1!0.41!3.46!ENO1;;chr11:3400442..3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2@ZNF8!0.14!0.38!ZNF8;;chr19:7584204..7584218,+!p9@ZNF358!0.14!0.38!ZNF358;;chr1:151804314..151804321,-!p4@RORC!0.14!0.38!RORC;;chr1:158985457..158985468,+!p12@IFI16!0.14!0.38!IFI16;;chr1:164818496..164818503,+!p26@PBX1!0.14!0.38!PBX1;;chr1:200008734..200008765,+!p2@NR5A2!0.14!0.38!NR5A2;;chr1:211432643..211432652,+!p20@RCOR3!0.14!0.38!RCOR3;;chr1:211432862..211432871,+!p10@RCOR3!0.14!0.38!RCOR3;;chr1:212738742..212738755,+!p2@ATF3!0.14!0.38!ATF3;;chr1:212873061..212873080,-!p4@BATF3!0.14!0.38!BATF3;;chr1:221053526..221053540,+!p13@HLX!0.14!0.38!HLX;;chr1:2234717..2234744,+!p4@SKI!0.14!0.38!SKI;;chr1:227751287..227751298,+!p2@ZNF678!0.14!0.38!ZNF678;;chr1:3568928..3568946,+!p4@TP73!0.14!0.38!TP73;;chr1:3568961..3568973,+!p6@TP73!0.14!0.38!TP73;;chr1:3569072..3569093,+!p1@TP73!0.14!0.38!TP73;;chr1:3569101..3569115,+!p2@TP73!0.14!0.38!TP73;;chr1:40627108..40627113,+!p3@RLF!0.14!0.38!RLF;;chr1:47779845..47779848,-!p3@STIL,p8@TAL1!0.14!0.38!TAL1;;chr1:52991933..52991947,-!p3@ZCCHC11!0.14!0.38!ZCCHC11;;chr1:61547405..61547434,+!p11@NFIA!0.14!0.38!NFIA;;chr1:63788229..63788250,+!p1@FOXD3!0.14!0.38!FOXD3;;chr1:8586069..8586080,-!p35@RERE!0.14!0.38!RERE;;chr1:8935427..8935438,-!p28@ENO1!0.14!0.38!ENO1;;chr1:8935456..8935467,-!p27@ENO1!0.14!0.38!ENO1;;chr20:48808064..48808086,+!p15@CEBPB!0.14!0.38!CEBPB;;chr20:50808639..50808661,-!p6@ZFP64!0.14!0.38!ZFP64;;chr20:51589792..51589811,+!p7@TSHZ2!0.14!0.38!TSHZ2;;chr20:51589835..51589848,+!p5@TSHZ2!0.14!0.38!TSHZ2;;chr20:52226313..52226350,-!p3@ZNF217!0.14!0.38!ZNF217;;chr20:6749078..6749089,+!p9@BMP2!0.14!0.38!BMP2;;chr21:30671130..30671140,+!p10@BACH1!0.14!0.38!BACH1;;chr21:38071462..38071474,+!p3@SIM2!0.14!0.38!SIM2;;chr21:40032884..40032915,-!p2@ERG!0.14!0.38!ERG;;chr21:40177120..40177141,+!p5@ETS2!0.14!0.38!ETS2;;chr10:102505655..102505689,+!p10@PAX2!0.14!0.38!PAX2;;chr10:104157748..104157760,+!p17@NFKB2!0.14!0.38!NFKB2;;chr10:124768217..124768228,-!p2@IKZF5!0.14!0.38!IKZF5;;chr10:124895520..124895540,+!p3@HMX3!0.14!0.38!HMX3;;chr10:124895548..124895570,+!p2@HMX3!0.14!0.38!HMX3;;chr10:135121763..135121783,+!p5@ZNF511!0.14!0.38!ZNF511;;chr10:28035112..28035130,-!p5@MKX!0.14!0.38!MKX;;chr10:60144869..60144887,+!p3@TFAM!0.14!0.38!TFAM;;chr11:16629261..16629284,-!p1@SOX6!0.14!0.38!SOX6;;chr11:34663654..34663663,+!p17@EHF!0.14!0.38!EHF;;chr11:47279167..47279178,+!p10@NR1H3!0.14!0.38!NR1H3;;chr11:64073848..64073856,+!p6@ESRRA!0.14!0.38!ESRRA;;chr11:65686689..65686700,+!p14@DRAP1!0.14!0.38!DRAP1;;chr11:65688877..65688891,+!p13@DRAP1!0.14!0.38!DRAP1;;chr11:8040739..8040815,+!p4@TUB!0.14!0.38!TUB;;chr12:10856697..10856712,-!p12@CSDA!0.14!0.38!CSDA;;chr12:10856713..10856723,-!p23@CSDA!0.14!0.38!CSDA;;chr12:10865922..10865934,-!p15@CSDA!0.14!0.38!CSDA;;chr12:10876282..10876288,-!p29@CSDA!0.14!0.38!CSDA;;chr12:115122303..115122314,-!p6@TBX3!0.14!0.38!TBX3;;chr12:124496534..124496544,+!p6@ZNF664!0.14!0.38!ZNF664;;chr12:124873824..124873833,-!p19@NCOR2!0.14!0.38!NCOR2;;chr12:12794994..12795024,+!p5@CREBL2!0.14!0.38!CREBL2;;chr12:51611583..51611612,-!p4@POU6F1!0.14!0.38!POU6F1;;chr12:52437488..52437507,+!p2@NR4A1!0.14!0.38!NR4A1;;chr12:54332675..54332686,+!p4@HOXC13!0.14!0.38!HOXC13;;chr12:54367012..54367025,+!p5@HOXC11!0.14!0.38!HOXC11;;chr12:54378864..54378884,+!p6@HOXC10!0.14!0.38!HOXC10;;chr12:54379011..54379016,+!p15@HOXC10!0.14!0.38!HOXC10;;chr12:54379066..54379073,+!p11@HOXC10!0.14!0.38!HOXC10;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.14!0.38!HOXC5;;chr12:54778471..54778528,-!p1@ZNF385A!0.14!0.38!ZNF385A;;chr12:56583362..56583369,-!p7@SMARCC2!0.14!0.38!SMARCC2;;chr12:69753583..69753598,+!p2@YEATS4!0.14!0.38!YEATS4;;chr12:72056897..72056908,+!p12@THAP2!0.14!0.38!THAP2;;chr12:80085120..80085156,-!p14@PAWR!0.14!0.38!PAWR;;chr12:95467222..95467233,-!p3@NR2C1!0.14!0.38!NR2C1;;chr13:100634111..100634118,+!p8@ZIC2!0.14!0.38!ZIC2;;chr13:100634130..100634143,+!p3@ZIC2!0.14!0.38!ZIC2;;chr13:45150896..45150927,-!p17@TSC22D1!0.14!0.38!TSC22D1;;chr13:45151548..45151569,-!p9@TSC22D1!0.14!0.38!TSC22D1;;chr13:46543936..46543949,-!p19@ZC3H13!0.14!0.38!ZC3H13;;chr13:73636310..73636330,+!p5@KLF5!0.14!0.38!KLF5;;chr13:73636334..73636351,+!p6@KLF5!0.14!0.38!KLF5;;chr13:73636621..73636647,+!p4@KLF5!0.14!0.38!KLF5;;chr14:105935396..105935413,+!p4@MTA1!0.14!0.38!MTA1;;chr14:35873069..35873078,-!p13@NFKBIA!0.14!0.38!NFKBIA;;chr14:35874077..35874091,-!p8@NFKBIA!0.14!0.38!NFKBIA;;chr14:35874296..35874308,-!p12@NFKBIA!0.14!0.38!NFKBIA;;chr14:36989427..36989442,-!p1@NKX2-1!0.14!0.38!NKX2-1;;chr14:36989892..36989908,-!p9@NKX2-1!0.14!0.38!NKX2-1;;chr14:36990398..36990415,-!p10@NKX2-1!0.14!0.38!NKX2-1;;chr14:37051600..37051611,-!p2@NKX2-8!0.14!0.38!NKX2-8;;chr14:38064536..38064550,-!p7@FOXA1!0.14!0.38!FOXA1;;chr14:38064590..38064606,-!p2@FOXA1!0.14!0.38!FOXA1;;chr14:45722418..45722426,-!p6@MIS18BP1!0.14!0.38!MIS18BP1;;chr14:64804818..64804842,-!p3@ESR2!0.14!0.38!ESR2;;chr14:68282778..68282790,-!p2@ZFYVE26!0.14!0.38!ZFYVE26;;chr14:69263043..69263069,-!p8@ZFP36L1!0.14!0.38!ZFP36L1;;chr14:75746340..75746368,+!p3@FOS!0.14!0.38!FOS;;chr14:75747250..75747267,+!p5@FOS!0.14!0.38!FOS;;chr15:31619140..31619152,+!p11@KLF13!0.14!0.38!KLF13;;chr15:31684663..31684717,+!p10@KLF13!0.14!0.38!KLF13;;chr15:35280823..35280852,-!p6@ZNF770!0.14!0.38!ZNF770;;chr15:37391614..37391626,-!p18@MEIS2!0.14!0.38!MEIS2;;chr15:42783238..42783243,-!p16@ZFP106!0.14!0.38!ZFP106;;chr15:57210772..57210803,-!p7@ZNF280D!0.14!0.38!ZNF280D;;chr15:57211064..57211075,+!p12@TCF12!0.14!0.38!TCF12;;chr15:57211318..57211355,+!p10@TCF12!0.14!0.38!TCF12;;chr15:66994718..66994729,+!p4@SMAD6!0.14!0.38!SMAD6;;chr15:66994885..66994904,+!p7@SMAD6!0.14!0.38!SMAD6;;chr15:67418177..67418204,+!p9@SMAD3!0.14!0.38!SMAD3;;chr15:96880438..96880445,+!p23@NR2F2!0.14!0.38!NR2F2;;chr16:49698228..49698243,-!p2@ZNF423!0.14!0.38!ZNF423;;chr16:54320302..54320317,-!p10@IRX3!0.14!0.38!IRX3;;chr16:54964690..54964703,+!p4@IRX5!0.14!0.38!IRX5;;chr16:67197654..67197716,+!p3@HSF4!0.14!0.38!HSF4;;chr16:73093210..73093223,-!p13@ZFHX3!0.14!0.38!ZFHX3;;chr16:86600870..86600921,+!p2@FOXC2!0.14!0.38!FOXC2;;chr16:8963020..8963054,-!p6@CARHSP1!0.14!0.38!CARHSP1;;chr17:17721569..17721574,-!p9@SREBF1!0.14!0.38!SREBF1;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!0.14!0.38!SEBOX;;chr17:36104873..36104903,-!p3@HNF1B!0.14!0.38!HNF1B;;chr17:38244601..38244612,+!p6@THRA!0.14!0.38!THRA;;chr17:40440446..40440464,+!p5@STAT5A!0.14!0.38!STAT5A;;chr17:41277334..41277348,-!p6@BRCA1!0.14!0.38!BRCA1;;chr17:41622731..41622764,-!p5@ETV4!0.14!0.38!ETV4;;chr17:41622982..41623001,-!p11@ETV4!0.14!0.38!ETV4;;chr17:41623716..41623727,-!p12@ETV4!0.14!0.38!ETV4;;chr17:41739036..41739040,-!p5@MEOX1!0.14!0.38!MEOX1;;chr17:46621146..46621180,-!p10@HOXB2!0.14!0.38!HOXB2;;chr17:46622143..46622152,-!p14@HOXB2!0.14!0.38!HOXB2;;chr17:46622175..46622186,-!p12@HOXB2!0.14!0.38!HOXB2;;chr17:46655578..46655589,-!p4@HOXB4!0.14!0.38!HOXB4;;chr17:46675539..46675551,-!p7@HOXB6!0.14!0.38!HOXB6;;chr17:46691732..46691766,-!p4@HOXB8!0.14!0.38!HOXB8;;chr17:46691990..46692004,-!p11@HOXB8!0.14!0.38!HOXB8;;chr17:46703436..46703460,-!p7@HOXB9!0.14!0.38!HOXB9;;chr17:46806419..46806438,-!p4@HOXB13!0.14!0.38!HOXB13;;chr17:48046543..48046575,+!p2@DLX4!0.14!0.38!DLX4;;chr17:48049323..48049330,+!p6@DLX4!0.14!0.38!DLX4;;chr17:48072063..48072074,-!p5@DLX3!0.14!0.38!DLX3;;chr17:7387459..7387470,-!p10@ZBTB4!0.14!0.38!ZBTB4;;chr17:80477099..80477123,+!p10@FOXK2!0.14!0.38!FOXK2;;chr18:19749353..19749367,+!p4@GATA6!0.14!0.38!GATA6;;chr18:19750951..19750980,+!p10@GATA6!0.14!0.38!GATA6;;chr18:22932173..22932180,-!p7@ZNF521!0.14!0.38!ZNF521;;chr18:42646649..42646652,+!p9@SETBP1!0.14!0.38!SETBP1;;chr18:45663490..45663528,-!p2@ZBTB7C!0.14!0.38!ZBTB7C;;chr18:55102959..55102985,+!p6@ONECUT2!0.14!0.38!ONECUT2;;chr18:77155942..77155951,+!p3@NFATC1!0.14!0.38!NFATC1;;chr19:12405588..12405595,-!p4@ZNF44!0.14!0.38!ZNF44;;chr19:13136166..13136177,+!p40@NFIX!0.14!0.38!NFIX;;chr19:1622138..1622153,-!p7@TCF3!0.14!0.38!TCF3;;chr19:18391642..18391645,-!p10@JUND!0.14!0.38!JUND;;chr19:2867325..2867348,+!p1@ZNF556!0.14!0.38!ZNF556;;chr19:3359158..3359209,+!p5@NFIC!0.14!0.38!NFIC;;chr19:3381943..3381961,+!p8@NFIC!0.14!0.38!NFIC;;
|sample_dev_stage=
|ffid_belonging_in_development=UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316
|sample_tissue=
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=56
|sample_ethnicity=
|rna_rin=9.6
|rna_od260/230=1.88
|rna_od260/280=2.03
|sample_cell_type=unclassifiable
|sample_cell_line=Hep-2
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Line 66: Line 40:
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|rna_box=125
|rna_catalog_number=
|rna_concentration=0.72561
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=2c
|rna_od260/230=1.88
|rna_od260/280=2.03
|rna_position=E6
|rna_rin=9.6
|rna_sample_type=total RNA
|rna_tube_id=1.25E+08
|rna_weight_ug=10
|sample_age=56
|sample_category=cell lines
|sample_cell_catalog=
|sample_cell_line=Hep-2
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Christine Wells (University of Queensland)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=epidermoid carcinoma
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.41762735791166e-255!GO:0005737;cytoplasm;1.17306965284855e-207!GO:0043226;organelle;5.56670695710705e-206!GO:0043231;intracellular membrane-bound organelle;5.59867306117291e-206!GO:0043227;membrane-bound organelle;6.33135183403032e-206!GO:0043229;intracellular organelle;1.88702390121487e-205!GO:0044422;organelle part;1.32767519074683e-177!GO:0044446;intracellular organelle part;8.48487702971292e-176!GO:0044444;cytoplasmic part;8.09341634140671e-156!GO:0032991;macromolecular complex;9.31547591843565e-123!GO:0030529;ribonucleoprotein complex;2.01761617638227e-103!GO:0005739;mitochondrion;1.17336272588752e-101!GO:0044237;cellular metabolic process;5.13260051147602e-94!GO:0044238;primary metabolic process;9.11339977435743e-90!GO:0043233;organelle lumen;2.88041200854317e-88!GO:0031974;membrane-enclosed lumen;2.88041200854317e-88!GO:0044428;nuclear part;1.63784781457709e-87!GO:0003723;RNA binding;6.47961202002363e-84!GO:0043170;macromolecule metabolic process;8.94039808075238e-75!GO:0005634;nucleus;1.61947862763938e-74!GO:0005515;protein binding;7.26606550002809e-65!GO:0044429;mitochondrial part;1.02677565193833e-64!GO:0006396;RNA processing;3.86277046396479e-64!GO:0005840;ribosome;2.54636610539346e-62!GO:0043234;protein complex;5.09711285762722e-62!GO:0031090;organelle membrane;5.33004968089618e-60!GO:0006412;translation;3.07185632381703e-59!GO:0031967;organelle envelope;1.06407386631968e-56!GO:0031975;envelope;1.66013363125705e-56!GO:0003735;structural constituent of ribosome;6.58771859642026e-54!GO:0009058;biosynthetic process;7.19332869765628e-54!GO:0044249;cellular biosynthetic process;1.05124829047244e-53!GO:0031981;nuclear lumen;1.08044147618521e-50!GO:0016043;cellular component organization and biogenesis;3.42821994659645e-47!GO:0033279;ribosomal subunit;4.16056949666781e-47!GO:0019538;protein metabolic process;8.80407983146081e-46!GO:0006259;DNA metabolic process;2.22928409734959e-45!GO:0015031;protein transport;1.06094346428051e-43!GO:0016071;mRNA metabolic process;1.74901673392836e-43!GO:0005829;cytosol;2.22756469876716e-43!GO:0009059;macromolecule biosynthetic process;2.70217858868064e-43!GO:0033036;macromolecule localization;2.84528158998703e-43!GO:0043228;non-membrane-bound organelle;1.76737435168696e-41!GO:0043232;intracellular non-membrane-bound organelle;1.76737435168696e-41!GO:0005740;mitochondrial envelope;1.97880798740859e-41!GO:0008380;RNA splicing;3.26372246733063e-41!GO:0044260;cellular macromolecule metabolic process;2.12166674716442e-40!GO:0044267;cellular protein metabolic process;5.1345105542683e-40!GO:0045184;establishment of protein localization;8.04200606966743e-40!GO:0006397;mRNA processing;1.4880815084597e-39!GO:0019866;organelle inner membrane;1.58168569882474e-39!GO:0008104;protein localization;3.37449360028121e-39!GO:0031966;mitochondrial membrane;5.61073301053508e-39!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.00871341271971e-38!GO:0005743;mitochondrial inner membrane;2.44265530242724e-37!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.95205269987994e-37!GO:0043283;biopolymer metabolic process;7.50039772618199e-36!GO:0065003;macromolecular complex assembly;1.7599278745845e-35!GO:0006996;organelle organization and biogenesis;1.47486642045397e-34!GO:0046907;intracellular transport;4.04533545797188e-34!GO:0007049;cell cycle;9.59612902915762e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.07292216246745e-31!GO:0010467;gene expression;2.5453414508833e-31!GO:0022607;cellular component assembly;1.33775789915572e-30!GO:0005681;spliceosome;2.15025291479894e-30!GO:0005654;nucleoplasm;3.41367846680178e-29!GO:0006886;intracellular protein transport;3.64064942712074e-29!GO:0000166;nucleotide binding;7.56746814750757e-29!GO:0031980;mitochondrial lumen;7.69487040158064e-29!GO:0005759;mitochondrial matrix;7.69487040158064e-29!GO:0006974;response to DNA damage stimulus;4.90841245391028e-27!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.74217613694953e-27!GO:0016462;pyrophosphatase activity;7.81606693517582e-27!GO:0016817;hydrolase activity, acting on acid anhydrides;9.67266887438801e-27!GO:0044445;cytosolic part;2.34394673292171e-26!GO:0006119;oxidative phosphorylation;2.56237663809259e-26!GO:0044455;mitochondrial membrane part;3.54801468591173e-26!GO:0017111;nucleoside-triphosphatase activity;8.85582856744461e-26!GO:0015934;large ribosomal subunit;2.58744339767116e-25!GO:0005730;nucleolus;6.97754993670695e-25!GO:0000278;mitotic cell cycle;1.07317248416568e-23!GO:0051186;cofactor metabolic process;1.14297318145828e-23!GO:0022402;cell cycle process;2.16884079505506e-23!GO:0015935;small ribosomal subunit;5.27901256597233e-23!GO:0044451;nucleoplasm part;5.5316123504209e-23!GO:0006281;DNA repair;6.61179881481815e-23!GO:0012505;endomembrane system;8.63746832895876e-23!GO:0005694;chromosome;4.34397718701792e-22!GO:0051649;establishment of cellular localization;8.28872036033937e-22!GO:0005783;endoplasmic reticulum;1.16287877175796e-21!GO:0051641;cellular localization;1.31444287681012e-21!GO:0006457;protein folding;1.54948120245922e-21!GO:0006260;DNA replication;1.65510881231672e-21!GO:0016874;ligase activity;6.00500060253445e-21!GO:0009719;response to endogenous stimulus;6.86459498628071e-21!GO:0044427;chromosomal part;8.21991129761019e-21!GO:0005746;mitochondrial respiratory chain;4.45421311745559e-20!GO:0017076;purine nucleotide binding;9.97014325717352e-20!GO:0032553;ribonucleotide binding;1.05737395895977e-19!GO:0032555;purine ribonucleotide binding;1.05737395895977e-19!GO:0022618;protein-RNA complex assembly;1.27912332561755e-19!GO:0005761;mitochondrial ribosome;1.40195308567546e-19!GO:0000313;organellar ribosome;1.40195308567546e-19!GO:0044432;endoplasmic reticulum part;2.19338941307805e-19!GO:0042254;ribosome biogenesis and assembly;2.31751695318067e-19!GO:0006732;coenzyme metabolic process;6.25186580771688e-19!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.3745987210949e-18!GO:0022403;cell cycle phase;1.51606525271483e-18!GO:0016887;ATPase activity;4.90218294216347e-18!GO:0005524;ATP binding;6.14258682150556e-18!GO:0032559;adenyl ribonucleotide binding;7.24594717376856e-18!GO:0000087;M phase of mitotic cell cycle;7.63540706297145e-18!GO:0003676;nucleic acid binding;7.63540706297145e-18!GO:0042623;ATPase activity, coupled;8.51331431775626e-18!GO:0044248;cellular catabolic process;9.75176533933694e-18!GO:0000502;proteasome complex (sensu Eukaryota);1.01767985086462e-17!GO:0050136;NADH dehydrogenase (quinone) activity;1.06700728206539e-17!GO:0003954;NADH dehydrogenase activity;1.06700728206539e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.06700728206539e-17!GO:0030554;adenyl nucleotide binding;1.1171075144967e-17!GO:0007067;mitosis;1.56009439387623e-17!GO:0044265;cellular macromolecule catabolic process;2.34478053495045e-17!GO:0008135;translation factor activity, nucleic acid binding;3.73017744234337e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.2894523697379e-17!GO:0051276;chromosome organization and biogenesis;1.2132554570293e-16!GO:0006399;tRNA metabolic process;1.28730374657703e-16!GO:0044453;nuclear membrane part;3.60420900286389e-16!GO:0006512;ubiquitin cycle;5.01844556496936e-16!GO:0005635;nuclear envelope;6.53821807071545e-16!GO:0042775;organelle ATP synthesis coupled electron transport;6.62001084512551e-16!GO:0042773;ATP synthesis coupled electron transport;6.62001084512551e-16!GO:0030964;NADH dehydrogenase complex (quinone);1.0991711235204e-15!GO:0045271;respiratory chain complex I;1.0991711235204e-15!GO:0005747;mitochondrial respiratory chain complex I;1.0991711235204e-15!GO:0051082;unfolded protein binding;1.39735922874952e-15!GO:0051301;cell division;1.44508556115154e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.73299255138971e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;1.87589857752468e-15!GO:0000375;RNA splicing, via transesterification reactions;1.87589857752468e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.87589857752468e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.25013630704751e-15!GO:0006605;protein targeting;2.40687508237685e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.35495792259363e-15!GO:0031965;nuclear membrane;3.65646118949591e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.98911351693496e-15!GO:0019941;modification-dependent protein catabolic process;4.17902100481331e-15!GO:0043632;modification-dependent macromolecule catabolic process;4.17902100481331e-15!GO:0005789;endoplasmic reticulum membrane;4.62338938141921e-15!GO:0000279;M phase;4.65102465531479e-15!GO:0044257;cellular protein catabolic process;5.79827587305556e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.01671023619934e-14!GO:0009057;macromolecule catabolic process;1.17776760078771e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.52798915737893e-14!GO:0043285;biopolymer catabolic process;1.74858970717863e-14!GO:0048770;pigment granule;2.03780375613314e-14!GO:0042470;melanosome;2.03780375613314e-14!GO:0009055;electron carrier activity;2.09739501413317e-14!GO:0005643;nuclear pore;6.92384005356353e-14!GO:0003743;translation initiation factor activity;1.6878317411821e-13!GO:0051188;cofactor biosynthetic process;1.85567860363407e-13!GO:0008134;transcription factor binding;2.34151066155641e-13!GO:0006364;rRNA processing;2.52616180832088e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;3.6790155504123e-13!GO:0048193;Golgi vesicle transport;4.4899032818131e-13!GO:0009259;ribonucleotide metabolic process;4.86774616088406e-13!GO:0016072;rRNA metabolic process;5.3252311299395e-13!GO:0006323;DNA packaging;1.20072954015226e-12!GO:0000074;regulation of progression through cell cycle;1.22887376525009e-12!GO:0065002;intracellular protein transport across a membrane;1.25373840305721e-12!GO:0051726;regulation of cell cycle;1.25373840305721e-12!GO:0006163;purine nucleotide metabolic process;1.31585264328263e-12!GO:0004386;helicase activity;1.65701794146816e-12!GO:0006413;translational initiation;1.71345630268501e-12!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.28747424716022e-12!GO:0050657;nucleic acid transport;2.38191169819675e-12!GO:0051236;establishment of RNA localization;2.38191169819675e-12!GO:0050658;RNA transport;2.38191169819675e-12!GO:0006403;RNA localization;2.59934681896938e-12!GO:0016491;oxidoreductase activity;4.13876303053946e-12!GO:0008026;ATP-dependent helicase activity;6.50253027795265e-12!GO:0046930;pore complex;6.77727137733113e-12!GO:0030163;protein catabolic process;7.13568572504761e-12!GO:0000785;chromatin;7.45627317943228e-12!GO:0016604;nuclear body;1.01318223578903e-11!GO:0006913;nucleocytoplasmic transport;1.1560893367509e-11!GO:0009150;purine ribonucleotide metabolic process;1.59759305351503e-11!GO:0009260;ribonucleotide biosynthetic process;2.1041287367228e-11!GO:0006333;chromatin assembly or disassembly;2.47600881732751e-11!GO:0009108;coenzyme biosynthetic process;2.57230683135795e-11!GO:0006164;purine nucleotide biosynthetic process;2.94235999850551e-11!GO:0005794;Golgi apparatus;3.48038474222422e-11!GO:0051169;nuclear transport;3.67598637186818e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.5868371645393e-11!GO:0012501;programmed cell death;4.58910685460207e-11!GO:0009117;nucleotide metabolic process;5.26452487823033e-11!GO:0008565;protein transporter activity;6.32096447917157e-11!GO:0006915;apoptosis;6.73972440564751e-11!GO:0065004;protein-DNA complex assembly;6.86653208193259e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.48353439500484e-11!GO:0016192;vesicle-mediated transport;1.10647974547269e-10!GO:0016787;hydrolase activity;1.11135148140475e-10!GO:0006261;DNA-dependent DNA replication;1.12610069691579e-10!GO:0051028;mRNA transport;1.55788848136191e-10!GO:0007005;mitochondrion organization and biogenesis;2.06148232506128e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.07287519722878e-10!GO:0009056;catabolic process;2.43772621728844e-10!GO:0009199;ribonucleoside triphosphate metabolic process;2.50745164909932e-10!GO:0009060;aerobic respiration;2.8315623596962e-10!GO:0009141;nucleoside triphosphate metabolic process;2.8870536797415e-10!GO:0009152;purine ribonucleotide biosynthetic process;3.50741571621122e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.55750711791747e-10!GO:0006446;regulation of translational initiation;3.91197665205847e-10!GO:0016779;nucleotidyltransferase activity;4.1781605254399e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.42189464020843e-10!GO:0004812;aminoacyl-tRNA ligase activity;4.42189464020843e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.42189464020843e-10!GO:0016070;RNA metabolic process;4.84663483252347e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.13332907546388e-10!GO:0009144;purine nucleoside triphosphate metabolic process;6.13332907546388e-10!GO:0006461;protein complex assembly;6.47153353580859e-10!GO:0030532;small nuclear ribonucleoprotein complex;6.47443133888042e-10!GO:0043038;amino acid activation;7.3574000714219e-10!GO:0006418;tRNA aminoacylation for protein translation;7.3574000714219e-10!GO:0043039;tRNA aminoacylation;7.3574000714219e-10!GO:0008219;cell death;8.0128380809387e-10!GO:0016265;death;8.0128380809387e-10!GO:0045333;cellular respiration;9.4181695921365e-10!GO:0015986;ATP synthesis coupled proton transport;1.05921851732246e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.05921851732246e-09!GO:0043412;biopolymer modification;1.74233555076807e-09!GO:0046034;ATP metabolic process;1.78655746957993e-09!GO:0008639;small protein conjugating enzyme activity;1.9808759611445e-09!GO:0003697;single-stranded DNA binding;2.19520787561909e-09!GO:0009142;nucleoside triphosphate biosynthetic process;2.29087830281557e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.29087830281557e-09!GO:0016607;nuclear speck;3.2800784994871e-09!GO:0006334;nucleosome assembly;4.11130935869877e-09!GO:0043566;structure-specific DNA binding;4.34717484173571e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.86406390923212e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.86406390923212e-09!GO:0004842;ubiquitin-protein ligase activity;6.00369023304512e-09!GO:0019787;small conjugating protein ligase activity;6.00708125576978e-09!GO:0017038;protein import;7.29465851028059e-09!GO:0006091;generation of precursor metabolites and energy;7.9586090065475e-09!GO:0016740;transferase activity;1.07048893888944e-08!GO:0031497;chromatin assembly;1.13189701075444e-08!GO:0019829;cation-transporting ATPase activity;1.17595711310614e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.37222517617847e-08!GO:0006754;ATP biosynthetic process;1.37973200171575e-08!GO:0006753;nucleoside phosphate metabolic process;1.37973200171575e-08!GO:0006084;acetyl-CoA metabolic process;1.4095557693929e-08!GO:0006099;tricarboxylic acid cycle;1.44179121720365e-08!GO:0046356;acetyl-CoA catabolic process;1.44179121720365e-08!GO:0006752;group transfer coenzyme metabolic process;1.59163205373016e-08!GO:0005819;spindle;2.3418585055196e-08!GO:0008033;tRNA processing;4.80273860692327e-08!GO:0016469;proton-transporting two-sector ATPase complex;4.92067865310934e-08!GO:0006366;transcription from RNA polymerase II promoter;5.02431480286922e-08!GO:0016881;acid-amino acid ligase activity;5.33158801771266e-08!GO:0005793;ER-Golgi intermediate compartment;7.49429991859181e-08!GO:0003712;transcription cofactor activity;8.35218666107823e-08!GO:0051329;interphase of mitotic cell cycle;1.04122547487975e-07!GO:0005657;replication fork;1.13050118586441e-07!GO:0051187;cofactor catabolic process;1.25400259043878e-07!GO:0051325;interphase;1.73316120397958e-07!GO:0008094;DNA-dependent ATPase activity;1.74832946120066e-07!GO:0000775;chromosome, pericentric region;1.76150450522914e-07!GO:0045259;proton-transporting ATP synthase complex;2.12953440082738e-07!GO:0015630;microtubule cytoskeleton;2.14745727343485e-07!GO:0006464;protein modification process;2.20014819882062e-07!GO:0009109;coenzyme catabolic process;2.76709690367016e-07!GO:0005768;endosome;2.91048664650716e-07!GO:0003899;DNA-directed RNA polymerase activity;3.01418225249978e-07!GO:0005762;mitochondrial large ribosomal subunit;3.01418225249978e-07!GO:0000315;organellar large ribosomal subunit;3.01418225249978e-07!GO:0042981;regulation of apoptosis;3.14029760643967e-07!GO:0043067;regulation of programmed cell death;3.14029760643967e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.39424449677893e-07!GO:0005839;proteasome core complex (sensu Eukaryota);4.53150287805699e-07!GO:0016568;chromatin modification;4.75258692004876e-07!GO:0000075;cell cycle checkpoint;5.27190185824458e-07!GO:0000245;spliceosome assembly;5.47978702757288e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.72073613380849e-07!GO:0008654;phospholipid biosynthetic process;6.10964193728113e-07!GO:0043623;cellular protein complex assembly;6.32796407294889e-07!GO:0030120;vesicle coat;6.32796407294889e-07!GO:0030662;coated vesicle membrane;6.32796407294889e-07!GO:0009165;nucleotide biosynthetic process;7.24480740694436e-07!GO:0032446;protein modification by small protein conjugation;1.13586600890059e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.16119697973724e-06!GO:0000079;regulation of cyclin-dependent protein kinase activity;1.44096402078287e-06!GO:0048475;coated membrane;1.63190232554345e-06!GO:0030117;membrane coat;1.63190232554345e-06!GO:0016567;protein ubiquitination;1.63190232554345e-06!GO:0007051;spindle organization and biogenesis;1.67950948719129e-06!GO:0016853;isomerase activity;1.80767926461041e-06!GO:0003724;RNA helicase activity;1.86291178374152e-06!GO:0006916;anti-apoptosis;1.92346823887977e-06!GO:0000314;organellar small ribosomal subunit;1.92937048041217e-06!GO:0005763;mitochondrial small ribosomal subunit;1.92937048041217e-06!GO:0004298;threonine endopeptidase activity;2.28090976899104e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.31014550118279e-06!GO:0043687;post-translational protein modification;2.46227608443189e-06!GO:0051427;hormone receptor binding;3.23024630784015e-06!GO:0043069;negative regulation of programmed cell death;3.23924962881266e-06!GO:0006082;organic acid metabolic process;3.27920712364965e-06!GO:0019752;carboxylic acid metabolic process;3.57670848684161e-06!GO:0005813;centrosome;4.19068972482265e-06!GO:0046483;heterocycle metabolic process;4.66277912450607e-06!GO:0043066;negative regulation of apoptosis;5.14122561494767e-06!GO:0005667;transcription factor complex;5.20777202889785e-06!GO:0000151;ubiquitin ligase complex;5.31144332661057e-06!GO:0006302;double-strand break repair;5.36246462510289e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.66922724102028e-06!GO:0015399;primary active transmembrane transporter activity;6.66922724102028e-06!GO:0006613;cotranslational protein targeting to membrane;6.80410460138935e-06!GO:0051170;nuclear import;7.04439652469943e-06!GO:0035257;nuclear hormone receptor binding;7.79337606629891e-06!GO:0005815;microtubule organizing center;7.90301808911901e-06!GO:0044452;nucleolar part;8.10299150910616e-06!GO:0051168;nuclear export;8.45448102383311e-06!GO:0008168;methyltransferase activity;8.671875907629e-06!GO:0051246;regulation of protein metabolic process;9.20908163438818e-06!GO:0006414;translational elongation;9.83887470677689e-06!GO:0046474;glycerophospholipid biosynthetic process;1.01949071215475e-05!GO:0016741;transferase activity, transferring one-carbon groups;1.03301424487146e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.10479009670762e-05!GO:0005788;endoplasmic reticulum lumen;1.13731127023136e-05!GO:0045454;cell redox homeostasis;1.16990578328262e-05!GO:0016126;sterol biosynthetic process;1.78843558671677e-05!GO:0000786;nucleosome;1.8936372764619e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.9132989882425e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.10923104258575e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.28223885732293e-05!GO:0003924;GTPase activity;2.42279472603709e-05!GO:0006606;protein import into nucleus;2.5243153118047e-05!GO:0006626;protein targeting to mitochondrion;2.58909937969494e-05!GO:0008610;lipid biosynthetic process;3.08070654525879e-05!GO:0003682;chromatin binding;3.19445534794607e-05!GO:0005773;vacuole;3.19445534794607e-05!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;3.19445534794607e-05!GO:0051052;regulation of DNA metabolic process;3.65174769310826e-05!GO:0043021;ribonucleoprotein binding;3.97813117998553e-05!GO:0006839;mitochondrial transport;4.04629148830827e-05!GO:0006310;DNA recombination;4.4567592772339e-05!GO:0048523;negative regulation of cellular process;4.5452028683036e-05!GO:0046489;phosphoinositide biosynthetic process;4.91975773738539e-05!GO:0008186;RNA-dependent ATPase activity;4.97944495220243e-05!GO:0007088;regulation of mitosis;5.21265236301665e-05!GO:0043681;protein import into mitochondrion;5.43145004450969e-05!GO:0050662;coenzyme binding;5.80653246704266e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.13742666390704e-05!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;6.13867529897244e-05!GO:0006695;cholesterol biosynthetic process;6.43268489913689e-05!GO:0031324;negative regulation of cellular metabolic process;6.60364587060697e-05!GO:0003690;double-stranded DNA binding;6.8870155802561e-05!GO:0003713;transcription coactivator activity;7.05943530326845e-05!GO:0030867;rough endoplasmic reticulum membrane;7.30831047360922e-05!GO:0044440;endosomal part;7.67452349137791e-05!GO:0010008;endosome membrane;7.67452349137791e-05!GO:0005753;mitochondrial proton-transporting ATP synthase complex;7.83501150031437e-05!GO:0000776;kinetochore;8.66478910997528e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;8.84269986973885e-05!GO:0019867;outer membrane;8.84415030567534e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000110788225198034!GO:0031968;organelle outer membrane;0.000112917246131136!GO:0005770;late endosome;0.000116189561826935!GO:0000323;lytic vacuole;0.000121337895266229!GO:0005764;lysosome;0.000121337895266229!GO:0004004;ATP-dependent RNA helicase activity;0.00013815255853128!GO:0016859;cis-trans isomerase activity;0.000154083690952999!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00016097143274943!GO:0000059;protein import into nucleus, docking;0.00017123642596968!GO:0043284;biopolymer biosynthetic process;0.000175143536241015!GO:0004518;nuclease activity;0.000178599398839496!GO:0003678;DNA helicase activity;0.000179641201294634!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00019043014810264!GO:0004527;exonuclease activity;0.000190761373297149!GO:0044431;Golgi apparatus part;0.00019354167952892!GO:0006383;transcription from RNA polymerase III promoter;0.000197612929235096!GO:0048037;cofactor binding;0.000216629889556945!GO:0006118;electron transport;0.000224851979843139!GO:0045786;negative regulation of progression through cell cycle;0.000230471026545092!GO:0006612;protein targeting to membrane;0.000235025369514189!GO:0042802;identical protein binding;0.000247337884254801!GO:0006793;phosphorus metabolic process;0.00024756588233848!GO:0006796;phosphate metabolic process;0.00024756588233848!GO:0003684;damaged DNA binding;0.00024756588233848!GO:0043492;ATPase activity, coupled to movement of substances;0.000269017904869617!GO:0005798;Golgi-associated vesicle;0.00028654253965414!GO:0009112;nucleobase metabolic process;0.000315632739700927!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000322209882777002!GO:0005525;GTP binding;0.000325444256653192!GO:0009892;negative regulation of metabolic process;0.000326893959282165!GO:0019843;rRNA binding;0.000332507334856629!GO:0006650;glycerophospholipid metabolic process;0.000333894571803265!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000334269068518708!GO:0007059;chromosome segregation;0.000341603276944427!GO:0043596;nuclear replication fork;0.000362524048328287!GO:0033116;ER-Golgi intermediate compartment membrane;0.000366169905156422!GO:0006950;response to stress;0.000379108332524843!GO:0005048;signal sequence binding;0.000379108332524843!GO:0030880;RNA polymerase complex;0.000379889500360179!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000382856459582092!GO:0031072;heat shock protein binding;0.000390586781558057!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000423261248433789!GO:0003729;mRNA binding;0.000423723493767133!GO:0005791;rough endoplasmic reticulum;0.000430566493445618!GO:0015992;proton transport;0.000442336081655391!GO:0005741;mitochondrial outer membrane;0.000456702080094236!GO:0046467;membrane lipid biosynthetic process;0.00047392227900556!GO:0051540;metal cluster binding;0.000475725018594499!GO:0051536;iron-sulfur cluster binding;0.000475725018594499!GO:0051920;peroxiredoxin activity;0.000486880192991691!GO:0006275;regulation of DNA replication;0.000512946698646121!GO:0006818;hydrogen transport;0.000512946698646121!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.0005284340464312!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000555527905282662!GO:0051789;response to protein stimulus;0.000555527905282662!GO:0006986;response to unfolded protein;0.000555527905282662!GO:0005684;U2-dependent spliceosome;0.000566847713482056!GO:0006520;amino acid metabolic process;0.000573459893570497!GO:0006506;GPI anchor biosynthetic process;0.000591200183295307!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000612698303229636!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000612698303229636!GO:0016563;transcription activator activity;0.000631142957865107!GO:0006270;DNA replication initiation;0.000634645610761405!GO:0016310;phosphorylation;0.000663172198963369!GO:0000049;tRNA binding;0.000665056543964397!GO:0044262;cellular carbohydrate metabolic process;0.000684276220720753!GO:0008361;regulation of cell size;0.000701913507934463!GO:0016363;nuclear matrix;0.000704814056575658!GO:0007006;mitochondrial membrane organization and biogenesis;0.000714415684315602!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00073035537223611!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00073035537223611!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00073035537223611!GO:0009116;nucleoside metabolic process;0.000741938809088729!GO:0032508;DNA duplex unwinding;0.000742436629772124!GO:0032392;DNA geometric change;0.000742436629772124!GO:0006767;water-soluble vitamin metabolic process;0.000749941174559253!GO:0048519;negative regulation of biological process;0.00077271620769533!GO:0005885;Arp2/3 protein complex;0.000786570216119281!GO:0048471;perinuclear region of cytoplasm;0.000805322941537772!GO:0016049;cell growth;0.000806970129427513!GO:0065009;regulation of a molecular function;0.000862803515100318!GO:0030176;integral to endoplasmic reticulum membrane;0.000881152273682835!GO:0016564;transcription repressor activity;0.000894204278399495!GO:0001558;regulation of cell growth;0.000902808602592941!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000910337828852078!GO:0000428;DNA-directed RNA polymerase complex;0.000910337828852078!GO:0006505;GPI anchor metabolic process;0.000984462420291516!GO:0051287;NAD binding;0.00101487803647518!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00102270437296158!GO:0006733;oxidoreduction coenzyme metabolic process;0.00102926139553261!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00115158180523696!GO:0007052;mitotic spindle organization and biogenesis;0.00117730502092843!GO:0031988;membrane-bound vesicle;0.00122118928380858!GO:0007093;mitotic cell cycle checkpoint;0.00132131921421297!GO:0000139;Golgi membrane;0.00137946419588468!GO:0048500;signal recognition particle;0.00138889150959177!GO:0003711;transcription elongation regulator activity;0.00139239595914301!GO:0008312;7S RNA binding;0.00142765935062756!GO:0006284;base-excision repair;0.00143660381572443!GO:0006007;glucose catabolic process;0.00146141061944554!GO:0051087;chaperone binding;0.00147684651524559!GO:0016023;cytoplasmic membrane-bound vesicle;0.00150924294215417!GO:0031252;leading edge;0.00151790421069562!GO:0008408;3'-5' exonuclease activity;0.0015444921424205!GO:0016272;prefoldin complex;0.00154968259145471!GO:0035258;steroid hormone receptor binding;0.00154968259145471!GO:0006405;RNA export from nucleus;0.00155489077064342!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00157275348678983!GO:0030132;clathrin coat of coated pit;0.00159728505701442!GO:0006268;DNA unwinding during replication;0.00160089273636349!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00162397287413669!GO:0030384;phosphoinositide metabolic process;0.00172778613238971!GO:0009451;RNA modification;0.001791869909472!GO:0008180;signalosome;0.00184711269900564!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00190026505463387!GO:0005876;spindle microtubule;0.00190026505463387!GO:0030663;COPI coated vesicle membrane;0.0019147546371581!GO:0030126;COPI vesicle coat;0.0019147546371581!GO:0006611;protein export from nucleus;0.00207741634689264!GO:0005769;early endosome;0.00211058500215461!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00211355970945806!GO:0043601;nuclear replisome;0.00211355970945806!GO:0030894;replisome;0.00211355970945806!GO:0000086;G2/M transition of mitotic cell cycle;0.00215840252344594!GO:0042393;histone binding;0.00228244667410553!GO:0006891;intra-Golgi vesicle-mediated transport;0.00234879360669713!GO:0006497;protein amino acid lipidation;0.00237348994852801!GO:0032561;guanyl ribonucleotide binding;0.00239758440654847!GO:0019001;guanyl nucleotide binding;0.00239758440654847!GO:0016125;sterol metabolic process;0.00240991350476117!GO:0048487;beta-tubulin binding;0.00243903419434381!GO:0042770;DNA damage response, signal transduction;0.00246299389287243!GO:0003746;translation elongation factor activity;0.00247703828901906!GO:0006352;transcription initiation;0.00249163233293128!GO:0006595;polyamine metabolic process;0.00255116323091105!GO:0000082;G1/S transition of mitotic cell cycle;0.00270203836812253!GO:0006144;purine base metabolic process;0.00279440472569154!GO:0006401;RNA catabolic process;0.00285056787413531!GO:0030118;clathrin coat;0.00291697121846852!GO:0008632;apoptotic program;0.00292521230794559!GO:0006066;alcohol metabolic process;0.00297977386522801!GO:0000096;sulfur amino acid metabolic process;0.00301243275378936!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00301243275378936!GO:0015002;heme-copper terminal oxidase activity;0.00301243275378936!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00301243275378936!GO:0004129;cytochrome-c oxidase activity;0.00301243275378936!GO:0022890;inorganic cation transmembrane transporter activity;0.00302888610258017!GO:0044255;cellular lipid metabolic process;0.00305290412638849!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00316488930572934!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00320560093893322!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00333279707885416!GO:0045047;protein targeting to ER;0.00333279707885416!GO:0004532;exoribonuclease activity;0.00341699461992177!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00341699461992177!GO:0006519;amino acid and derivative metabolic process;0.00349228779106856!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00362454436285055!GO:0000178;exosome (RNase complex);0.00363823279027596!GO:0005905;coated pit;0.00368042224884465!GO:0005637;nuclear inner membrane;0.00377671340536489!GO:0008320;protein transmembrane transporter activity;0.00403173429964002!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00426355606525299!GO:0005758;mitochondrial intermembrane space;0.00428493491739622!GO:0030137;COPI-coated vesicle;0.00438364199351035!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00449386525408729!GO:0000287;magnesium ion binding;0.00451621206375994!GO:0051252;regulation of RNA metabolic process;0.00451621206375994!GO:0031982;vesicle;0.00462794662237636!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00487175973012163!GO:0048522;positive regulation of cellular process;0.00498004517603786!GO:0006778;porphyrin metabolic process;0.00515635353110351!GO:0033013;tetrapyrrole metabolic process;0.00515635353110351!GO:0016408;C-acyltransferase activity;0.00526345863071501!GO:0051539;4 iron, 4 sulfur cluster binding;0.00535425785482251!GO:0016044;membrane organization and biogenesis;0.00538679718130272!GO:0008022;protein C-terminus binding;0.00558111540818369!GO:0016481;negative regulation of transcription;0.00572716990894128!GO:0003725;double-stranded RNA binding;0.0057962141562157!GO:0006979;response to oxidative stress;0.00586671614334121!GO:0031410;cytoplasmic vesicle;0.00642393597373612!GO:0009124;nucleoside monophosphate biosynthetic process;0.00656135514133036!GO:0009123;nucleoside monophosphate metabolic process;0.00656135514133036!GO:0006509;membrane protein ectodomain proteolysis;0.00657370256717816!GO:0033619;membrane protein proteolysis;0.00657370256717816!GO:0003714;transcription corepressor activity;0.00673436703906798!GO:0000922;spindle pole;0.00697578439620283!GO:0004003;ATP-dependent DNA helicase activity;0.00709806233269587!GO:0022884;macromolecule transmembrane transporter activity;0.00709872860139332!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.00709872860139332!GO:0050790;regulation of catalytic activity;0.00726648026988223!GO:0004549;tRNA-specific ribonuclease activity;0.00751122546014826!GO:0006400;tRNA modification;0.00754868881501552!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00757269397857792!GO:0030658;transport vesicle membrane;0.00760966703780681!GO:0008139;nuclear localization sequence binding;0.00761437422824574!GO:0006402;mRNA catabolic process;0.00774580326629229!GO:0030119;AP-type membrane coat adaptor complex;0.00778018591291523!GO:0008637;apoptotic mitochondrial changes;0.00794335888903078!GO:0031570;DNA integrity checkpoint;0.00809212555867212!GO:0043022;ribosome binding;0.00809743828670112!GO:0042158;lipoprotein biosynthetic process;0.00810696243007063!GO:0000725;recombinational repair;0.00825295827747581!GO:0000724;double-strand break repair via homologous recombination;0.00825295827747581!GO:0006730;one-carbon compound metabolic process;0.00826305304857978!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00871334036643399!GO:0004526;ribonuclease P activity;0.00872773180548164!GO:0005832;chaperonin-containing T-complex;0.00872773180548164!GO:0043154;negative regulation of caspase activity;0.00875234824363521!GO:0040008;regulation of growth;0.00891343240458684!GO:0006338;chromatin remodeling;0.00918651712190272!GO:0009119;ribonucleoside metabolic process;0.00920744186971465!GO:0032259;methylation;0.00930401424577557!GO:0009303;rRNA transcription;0.00943139953892885!GO:0006807;nitrogen compound metabolic process;0.00978193793135607!GO:0008234;cysteine-type peptidase activity;0.0102307726419677!GO:0043414;biopolymer methylation;0.0103043141069947!GO:0004540;ribonuclease activity;0.0103043141069947!GO:0000339;RNA cap binding;0.0104542962460207!GO:0045792;negative regulation of cell size;0.0104700304833398!GO:0030131;clathrin adaptor complex;0.0105500049835157!GO:0051338;regulation of transferase activity;0.0107791819910181!GO:0006096;glycolysis;0.0112031614013396!GO:0030308;negative regulation of cell growth;0.0112063416867359!GO:0031124;mRNA 3'-end processing;0.0112249428650936!GO:0016251;general RNA polymerase II transcription factor activity;0.0112650137380374!GO:0008629;induction of apoptosis by intracellular signals;0.0114941004577889!GO:0007243;protein kinase cascade;0.0116417370016135!GO:0000175;3'-5'-exoribonuclease activity;0.0120892295358448!GO:0005874;microtubule;0.012131588137415!GO:0016407;acetyltransferase activity;0.0124856536031156!GO:0006289;nucleotide-excision repair;0.0130584344472068!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0131838616926346!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0132458115590384!GO:0008299;isoprenoid biosynthetic process;0.0134964411196457!GO:0030660;Golgi-associated vesicle membrane;0.0137638563226629!GO:0046966;thyroid hormone receptor binding;0.0137822385442012!GO:0031970;organelle envelope lumen;0.0139962540508139!GO:0000228;nuclear chromosome;0.0140843073373512!GO:0005862;muscle thin filament tropomyosin;0.014106525230619!GO:0006779;porphyrin biosynthetic process;0.0142376543663022!GO:0033014;tetrapyrrole biosynthetic process;0.0142376543663022!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0145573943357558!GO:0009161;ribonucleoside monophosphate metabolic process;0.0145573943357558!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0145573943357558!GO:0030659;cytoplasmic vesicle membrane;0.0149395792632498!GO:0043549;regulation of kinase activity;0.0151759444445532!GO:0008652;amino acid biosynthetic process;0.0151759444445532!GO:0006740;NADPH regeneration;0.0151759444445532!GO:0006098;pentose-phosphate shunt;0.0151759444445532!GO:0004523;ribonuclease H activity;0.0153354037000004!GO:0030125;clathrin vesicle coat;0.0154290888574582!GO:0030665;clathrin coated vesicle membrane;0.0154290888574582!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0154628264360238!GO:0043189;H4/H2A histone acetyltransferase complex;0.015490643544828!GO:0006769;nicotinamide metabolic process;0.015558183512548!GO:0051053;negative regulation of DNA metabolic process;0.0155984546555504!GO:0043624;cellular protein complex disassembly;0.0156705464407304!GO:0044438;microbody part;0.0159553212029051!GO:0044439;peroxisomal part;0.0159553212029051!GO:0009308;amine metabolic process;0.0159553212029051!GO:0005996;monosaccharide metabolic process;0.0160572381220646!GO:0008203;cholesterol metabolic process;0.0161991135484975!GO:0005663;DNA replication factor C complex;0.0162076152839127!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0167635230860509!GO:0050178;phenylpyruvate tautomerase activity;0.0168291497400419!GO:0030521;androgen receptor signaling pathway;0.0168882956819288!GO:0006629;lipid metabolic process;0.0171814330294076!GO:0042168;heme metabolic process;0.0173345345630204!GO:0031902;late endosome membrane;0.0173345345630204!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0175105467502988!GO:0045039;protein import into mitochondrial inner membrane;0.0175105467502988!GO:0009003;signal peptidase activity;0.0175486717098434!GO:0006541;glutamine metabolic process;0.0176111515844112!GO:0008538;proteasome activator activity;0.0185477968865382!GO:0007034;vacuolar transport;0.0186180329269578!GO:0007021;tubulin folding;0.0186379210220642!GO:0006360;transcription from RNA polymerase I promoter;0.0186995950057772!GO:0006354;RNA elongation;0.0187026855219079!GO:0048146;positive regulation of fibroblast proliferation;0.0189406944035969!GO:0015631;tubulin binding;0.0190511052503813!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0190511052503813!GO:0019318;hexose metabolic process;0.0193192570078161!GO:0048144;fibroblast proliferation;0.0193585806609499!GO:0048145;regulation of fibroblast proliferation;0.0193585806609499!GO:0046365;monosaccharide catabolic process;0.0193587263197722!GO:0045045;secretory pathway;0.0193587263197722!GO:0006378;mRNA polyadenylation;0.019423365283024!GO:0000070;mitotic sister chromatid segregation;0.0196328002513344!GO:0043433;negative regulation of transcription factor activity;0.0197698384673733!GO:0000726;non-recombinational repair;0.0198798261334167!GO:0050681;androgen receptor binding;0.0201451285902426!GO:0007017;microtubule-based process;0.0203027872720482!GO:0005869;dynactin complex;0.0206343834332081!GO:0000030;mannosyltransferase activity;0.0208170826734697!GO:0016788;hydrolase activity, acting on ester bonds;0.0209190563769933!GO:0006006;glucose metabolic process;0.0213681829798639!GO:0000819;sister chromatid segregation;0.021403481645481!GO:0007010;cytoskeleton organization and biogenesis;0.0215967003234293!GO:0035267;NuA4 histone acetyltransferase complex;0.0217103083192159!GO:0032200;telomere organization and biogenesis;0.0217344154572732!GO:0000723;telomere maintenance;0.0217344154572732!GO:0030133;transport vesicle;0.0217811471436209!GO:0000152;nuclear ubiquitin ligase complex;0.0219863445407633!GO:0003923;GPI-anchor transamidase activity;0.0220517286617937!GO:0016255;attachment of GPI anchor to protein;0.0220517286617937!GO:0042765;GPI-anchor transamidase complex;0.0220517286617937!GO:0051059;NF-kappaB binding;0.0220886046582304!GO:0004860;protein kinase inhibitor activity;0.0220992131206699!GO:0043488;regulation of mRNA stability;0.0220992131206699!GO:0043487;regulation of RNA stability;0.0220992131206699!GO:0045859;regulation of protein kinase activity;0.0225872245916846!GO:0019899;enzyme binding;0.0227673648504201!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0228941298381951!GO:0030508;thiol-disulfide exchange intermediate activity;0.0229212357658528!GO:0022406;membrane docking;0.0233090028147338!GO:0048278;vesicle docking;0.0233090028147338!GO:0031903;microbody membrane;0.0233090028147338!GO:0005778;peroxisomal membrane;0.0233090028147338!GO:0006376;mRNA splice site selection;0.0233090028147338!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0233090028147338!GO:0008250;oligosaccharyl transferase complex;0.0233829435966951!GO:0019362;pyridine nucleotide metabolic process;0.0233829435966951!GO:0006220;pyrimidine nucleotide metabolic process;0.0234290502340038!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0234806812462219!GO:0010257;NADH dehydrogenase complex assembly;0.0234806812462219!GO:0033108;mitochondrial respiratory chain complex assembly;0.0234806812462219!GO:0043065;positive regulation of apoptosis;0.0237351313289461!GO:0042364;water-soluble vitamin biosynthetic process;0.0238165686492871!GO:0004576;oligosaccharyl transferase activity;0.0241851099901108!GO:0007040;lysosome organization and biogenesis;0.0244240829780411!GO:0016197;endosome transport;0.0249784284888135!GO:0030134;ER to Golgi transport vesicle;0.0250483425434208!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0252863061797479!GO:0046164;alcohol catabolic process;0.0254594053379447!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0254594053379447!GO:0032984;macromolecular complex disassembly;0.0254594053379447!GO:0006643;membrane lipid metabolic process;0.0257362200639189!GO:0006596;polyamine biosynthetic process;0.0258728052650925!GO:0006213;pyrimidine nucleoside metabolic process;0.0261077210533859!GO:0006417;regulation of translation;0.0264083631401055!GO:0046112;nucleobase biosynthetic process;0.0266671852661022!GO:0046519;sphingoid metabolic process;0.0268028684405794!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0268623031135093!GO:0005777;peroxisome;0.0270702033155553!GO:0042579;microbody;0.0270702033155553!GO:0005774;vacuolar membrane;0.0272943158231994!GO:0005732;small nucleolar ribonucleoprotein complex;0.0272943158231994!GO:0012506;vesicle membrane;0.0274431044378795!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0274840397978996!GO:0046982;protein heterodimerization activity;0.0274913071934981!GO:0046128;purine ribonucleoside metabolic process;0.0277389161508917!GO:0042278;purine nucleoside metabolic process;0.0277389161508917!GO:0046983;protein dimerization activity;0.0277723007439678!GO:0043068;positive regulation of programmed cell death;0.0280567714717859!GO:0031123;RNA 3'-end processing;0.0292058366859671!GO:0044433;cytoplasmic vesicle part;0.0295085099745582!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0296260044947654!GO:0031529;ruffle organization and biogenesis;0.0297918930060473!GO:0019320;hexose catabolic process;0.0300081981655789!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0305009800532715!GO:0000781;chromosome, telomeric region;0.0306979235265938!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0318892182823056!GO:0006518;peptide metabolic process;0.0318892182823056!GO:0009081;branched chain family amino acid metabolic process;0.0318892182823056!GO:0006904;vesicle docking during exocytosis;0.0318892182823056!GO:0042769;DNA damage response, detection of DNA damage;0.0326134828877452!GO:0009225;nucleotide-sugar metabolic process;0.0326428943940268!GO:0031406;carboxylic acid binding;0.0327175894990369!GO:0005658;alpha DNA polymerase:primase complex;0.0328084192298037!GO:0000077;DNA damage checkpoint;0.032839553209006!GO:0044454;nuclear chromosome part;0.0332021917223423!GO:0017166;vinculin binding;0.0334063570677072!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0336290288169123!GO:0030127;COPII vesicle coat;0.0339038746180922!GO:0012507;ER to Golgi transport vesicle membrane;0.0339038746180922!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0339038746180922!GO:0005669;transcription factor TFIID complex;0.0339038746180922!GO:0051716;cellular response to stimulus;0.0339889020022212!GO:0016790;thiolester hydrolase activity;0.0341592616231972!GO:0000123;histone acetyltransferase complex;0.0352854914871001!GO:0043241;protein complex disassembly;0.0353856792383158!GO:0004448;isocitrate dehydrogenase activity;0.035533389105525!GO:0006308;DNA catabolic process;0.0356478091889882!GO:0008156;negative regulation of DNA replication;0.0359500894272008!GO:0006739;NADP metabolic process;0.036206775554956!GO:0016453;C-acetyltransferase activity;0.0362624646464479!GO:0015036;disulfide oxidoreductase activity;0.0362990117596671!GO:0001836;release of cytochrome c from mitochondria;0.0364586320151375!GO:0022411;cellular component disassembly;0.0364586320151375!GO:0030503;regulation of cell redox homeostasis;0.0367418260947067!GO:0006672;ceramide metabolic process;0.0370369610076852!GO:0019206;nucleoside kinase activity;0.0371582914663849!GO:0016835;carbon-oxygen lyase activity;0.0373636606117117!GO:0006749;glutathione metabolic process;0.037449553869141!GO:0005784;translocon complex;0.0380296526841009!GO:0016417;S-acyltransferase activity;0.0382942607274617!GO:0004659;prenyltransferase activity;0.0386669316885223!GO:0031371;ubiquitin conjugating enzyme complex;0.0387473272882953!GO:0007346;regulation of progression through mitotic cell cycle;0.0388642990967108!GO:0007050;cell cycle arrest;0.0390278576713492!GO:0007033;vacuole organization and biogenesis;0.039137022684296!GO:0031326;regulation of cellular biosynthetic process;0.0392246155462005!GO:0008601;protein phosphatase type 2A regulator activity;0.0396368193207122!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0396537699470137!GO:0019783;small conjugating protein-specific protease activity;0.0399714985706549!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0401372922797266!GO:0050811;GABA receptor binding;0.0421656359195328!GO:0030677;ribonuclease P complex;0.0421656359195328!GO:0031577;spindle checkpoint;0.0426047144434634!GO:0006644;phospholipid metabolic process;0.0426775076468186!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0427971018577753!GO:0009889;regulation of biosynthetic process;0.044091559737467!GO:0030433;ER-associated protein catabolic process;0.044464400400943!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.044464400400943!GO:0017056;structural constituent of nuclear pore;0.0445058247546225!GO:0005971;ribonucleoside-diphosphate reductase complex;0.0446167851500677!GO:0006783;heme biosynthetic process;0.0448252079350923!GO:0030911;TPR domain binding;0.0448252079350923!GO:0008173;RNA methyltransferase activity;0.0448353661075774!GO:0003756;protein disulfide isomerase activity;0.0448906425271948!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0448906425271948!GO:0009066;aspartate family amino acid metabolic process;0.0449007540839555!GO:0040029;regulation of gene expression, epigenetic;0.0451241337070811!GO:0007041;lysosomal transport;0.0454395932782645!GO:0030032;lamellipodium biogenesis;0.0464607847998592!GO:0000097;sulfur amino acid biosynthetic process;0.0466722430400461!GO:0007004;telomere maintenance via telomerase;0.0466937728321718!GO:0004861;cyclin-dependent protein kinase inhibitor activity;0.0467527360553508!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0467527360553508!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0467527360553508!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0467527360553508!GO:0008536;Ran GTPase binding;0.0481085203698301!GO:0030027;lamellipodium;0.0481725843163851!GO:0050750;low-density lipoprotein receptor binding;0.0481837951976848!GO:0005975;carbohydrate metabolic process;0.0484195846503266!GO:0003702;RNA polymerase II transcription factor activity;0.0487011227683552!GO:0004177;aminopeptidase activity;0.0487679762094339!GO:0044437;vacuolar part;0.0491219946154894
|sample_id=11896
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=ESRRA:1.86248839871;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.7390907079;PPARG:1.63215805797;HES1:1.58500911002;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.5752529006;E2F1..5:1.56929398055;FOXM1:1.39421945517;NR5A1,2:1.28255545967;ELK1,4_GABP{A,B1}:1.18770515853;FOXQ1:1.13261384624;YY1:0.997614625131;bHLH_family:0.831316974252;FOXN1:0.754792402688;NRF1:0.740816926278;NR6A1:0.731997661223;PAX8:0.707827628405;NKX3-1:0.699796016955;MYB:0.666081308914;HOX{A6,A7,B6,B7}:0.652718517127;HIF1A:0.648179948692;NFY{A,B,C}:0.646232658876;PAX1,9:0.64410205857;PAX5:0.644101714842;HNF4A_NR2F1,2:0.639023635174;ARID5B:0.616084063431;HOXA9_MEIS1:0.602672584121;ZNF143:0.566445022769;CREB1:0.55764098358;POU1F1:0.554564454952;GCM1,2:0.523959422643;EP300:0.505362351454;NKX3-2:0.496400031793;SNAI1..3:0.469385710638;ZEB1:0.459405404609;LEF1_TCF7_TCF7L1,2:0.391784572962;IRF7:0.349794326131;TBX4,5:0.339978860671;IKZF1:0.33748103118;ALX1:0.322842375428;GFI1:0.319898193415;FOX{F1,F2,J1}:0.309981194126;FOXD3:0.307423083018;TEAD1:0.304008515469;UFEwm:0.274361973746;ZNF148:0.271024938889;PDX1:0.26669207568;MYOD1:0.265700889472;TP53:0.244284799276;PAX2:0.197703552853;ATF5_CREB3:0.18831326365;HLF:0.159038433675;NFE2L1:0.147581294606;ZBTB16:0.142496515685;VSX1,2:0.118762020676;HSF1,2:0.118435829074;GFI1B:0.111427148587;HOX{A5,B5}:0.106065640727;PAX3,7:0.105032802875;STAT5{A,B}:0.0906725838824;BACH2:0.0800196761053;NANOG:0.0622206517278;ONECUT1,2:0.0579448438128;LHX3,4:0.0560130523313;ATF6:0.0534931896222;NFE2:0.0496793575842;PAX4:0.041252383219;CUX2:0.0405113384999;RORA:0.0299556835015;OCT4_SOX2{dimer}:0.0207230402247;NR3C1:0.012279031095;ZNF423:0.000144463227079;TFDP1:-0.00254373317081;CDX1,2,4:-0.014366090772;PRRX1,2:-0.0172398188364;PITX1..3:-0.0302242377374;FOS_FOS{B,L1}_JUN{B,D}:-0.0388208617707;MYBL2:-0.0390773840808;PBX1:-0.0501136517204;ALX4:-0.0515958467604;CDC5L:-0.0562854499129;HAND1,2:-0.059875092564;HNF1A:-0.0636352481454;NFE2L2:-0.0650710439108;RXR{A,B,G}:-0.0699595740251;AHR_ARNT_ARNT2:-0.0809970546272;GTF2A1,2:-0.0818407751011;BREu{core}:-0.0880193787657;MEF2{A,B,C,D}:-0.0960019869584;HOX{A4,D4}:-0.097530679401;TBP:-0.128870249928;MAFB:-0.13421604669;ESR1:-0.137865781791;TLX1..3_NFIC{dimer}:-0.143441387458;TEF:-0.144120193483;MTF1:-0.16749102535;IKZF2:-0.180574678624;ATF4:-0.181908141354;RFX2..5_RFXANK_RFXAP:-0.199825358749;SOX{8,9,10}:-0.215058671001;NFIL3:-0.232674887838;ZBTB6:-0.244307935822;GLI1..3:-0.256826042682;LMO2:-0.257990414999;NFKB1_REL_RELA:-0.259789206718;FOXA2:-0.267238588621;FOSL2:-0.269503720913;ELF1,2,4:-0.274787949646;NKX2-2,8:-0.278810234454;NKX6-1,2:-0.284601477753;GZF1:-0.304735363647;PAX6:-0.306407427952;FOX{I1,J2}:-0.308304577953;POU3F1..4:-0.312571261033;CEBPA,B_DDIT3:-0.324760000012;T:-0.341790694616;JUN:-0.348621625835;RXRA_VDR{dimer}:-0.349147883795;NR1H4:-0.352660466046;KLF4:-0.354288787917;TFCP2:-0.361384440193;RFX1:-0.365820996854;STAT2,4,6:-0.371890423009;GATA6:-0.381746056397;EN1,2:-0.386136630658;SREBF1,2:-0.402756652526;DBP:-0.468124699849;CRX:-0.469680846239;SOX17:-0.477425436985;FOXP3:-0.480293023094;IRF1,2:-0.497234541142;BPTF:-0.51854499828;EVI1:-0.524643733645;SPIB:-0.532988890978;REST:-0.537992442169;ZFP161:-0.538681650538;EBF1:-0.549173252988;HIC1:-0.553840003838;GTF2I:-0.592896027457;POU6F1:-0.598633978513;TFAP2{A,C}:-0.600091991239;ZNF384:-0.602674728103;SPI1:-0.607914945987;POU2F1..3:-0.618322410853;RBPJ:-0.623423343977;NKX2-1,4:-0.628351551876;SOX5:-0.629245244715;AIRE:-0.636389888401;SRF:-0.644525280826;RUNX1..3:-0.714574963597;AR:-0.733633911191;TFAP4:-0.749329310444;FOXL1:-0.766126064617;FOXP1:-0.766505046527;ETS1,2:-0.778404935305;ADNP_IRX_SIX_ZHX:-0.788683521583;TFAP2B:-0.800013143371;TAL1_TCF{3,4,12}:-0.817946110633;HBP1_HMGB_SSRP1_UBTF:-0.827578125879;NHLH1,2:-0.830999368108;SP1:-0.838981653975;ZIC1..3:-0.839492205281;NFATC1..3:-0.857323076363;ATF2:-0.873550525048;MED-1{core}:-0.876171177111;HMGA1,2:-0.895567831727;GATA4:-0.901231281242;POU5F1:-0.952923916914;FOX{D1,D2}:-0.998328630513;SOX2:-1.0048757321;DMAP1_NCOR{1,2}_SMARC:-1.01193891764;RREB1:-1.03186458498;MYFfamily:-1.03526332826;TGIF1:-1.07054829679;MAZ:-1.0757838636;ZNF238:-1.12023944195;XCPE1{core}:-1.12617481611;EGR1..3:-1.14081430107;FOXO1,3,4:-1.14224191136;SMAD1..7,9:-1.15090251932;MTE{core}:-1.16996079383;XBP1:-1.170358838;NKX2-3_NKX2-5:-1.18711068592;TOPORS:-1.19851168107;PRDM1:-1.20146455297;STAT1,3:-1.34962664711;HMX1:-1.35552506957;MZF1:-1.36819348115;TLX2:-1.39672016351;NFIX:-1.40924611381;PATZ1:-1.42485524419;NANOG{mouse}:-1.45782202847;SPZ1:-1.83550848291
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11896-125E6;search_select_hide=table117:FF:11896-125E6
}}
}}

Latest revision as of 18:27, 4 June 2020

Name:Hep-2 cells treated with Streptococci strain JRS4, biol_rep3
Species:Human (Homo sapiens)
Library ID:CNhs13499
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age56
cell typeunclassifiable
cell lineHep-2
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2c
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005842
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13499 CAGE DRX007790 DRR008662
Accession ID Hg19

Library idBAMCTSS
CNhs13499 DRZ000087 DRZ001472
Accession ID Hg38

Library idBAMCTSS
CNhs13499 DRZ011437 DRZ012822
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0366
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0.805
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.486
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0575
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.211
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.111
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0973
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0775
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.831
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.199
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.0074
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.881
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.543
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.53
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13499

Jaspar motifP-value
MA0002.20.244
MA0003.10.779
MA0004.10.109
MA0006.10.478
MA0007.10.687
MA0009.10.512
MA0014.10.566
MA0017.10.13
MA0018.20.714
MA0019.10.892
MA0024.16.35105e-8
MA0025.10.418
MA0027.10.516
MA0028.13.19456e-5
MA0029.10.775
MA0030.10.344
MA0031.10.123
MA0035.20.291
MA0038.10.789
MA0039.20.0577
MA0040.10.703
MA0041.10.366
MA0042.10.485
MA0043.10.19
MA0046.10.902
MA0047.20.716
MA0048.10.129
MA0050.10.0052
MA0051.10.766
MA0052.10.0249
MA0055.11.59644e-4
MA0057.10.173
MA0058.10.0388
MA0059.10.00513
MA0060.10.239
MA0061.10.5
MA0062.20.0137
MA0065.20.0034
MA0066.10.424
MA0067.10.476
MA0068.17.34898e-7
MA0069.10.237
MA0070.10.639
MA0071.10.0161
MA0072.10.508
MA0073.10.526
MA0074.10.446
MA0076.11.95894e-4
MA0077.10.659
MA0078.10.286
MA0079.20.249
MA0080.25.82923e-7
MA0081.10.45
MA0083.10.0193
MA0084.10.187
MA0087.10.237
MA0088.10.0363
MA0090.10.0269
MA0091.10.536
MA0092.10.549
MA0093.10.0699
MA0099.20.92
MA0100.10.385
MA0101.10.459
MA0102.20.459
MA0103.10.0129
MA0104.25.88423e-4
MA0105.10.467
MA0106.10.428
MA0107.10.188
MA0108.20.0641
MA0111.10.611
MA0112.20.00165
MA0113.10.796
MA0114.10.0031
MA0115.10.0136
MA0116.10.122
MA0117.10.631
MA0119.10.388
MA0122.10.924
MA0124.10.955
MA0125.10.695
MA0131.10.42
MA0135.10.543
MA0136.10.0125
MA0137.20.00796
MA0138.20.207
MA0139.10.451
MA0140.10.847
MA0141.13.13853e-4
MA0142.10.942
MA0143.10.131
MA0144.10.348
MA0145.10.791
MA0146.10.198
MA0147.11.71582e-4
MA0148.10.124
MA0149.10.0141
MA0150.10.797
MA0152.10.432
MA0153.10.104
MA0154.10.788
MA0155.10.373
MA0156.10.163
MA0157.10.134
MA0159.10.0299
MA0160.10.00129
MA0162.10.124
MA0163.10.00328
MA0164.10.277
MA0258.10.229
MA0259.10.0286



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13499

Novel motifP-value
10.0294
100.0469
1000.0409
1010.276
1020.911
1030.493
1040.851
1050.174
1060.0967
1070.184
1080.783
1090.00111
110.468
1100.228
1110.272
1120.779
1130.00478
1140.187
1150.524
1160.218
1170.11
1180.0822
1190.255
120.477
1200.0145
1210.352
1220.152
1230.063
1240.771
1250.505
1260.564
1270.101
1280.00115
1290.693
132.64397e-4
1300.765
1310.175
1320.95
1330.119
1340.878
1350.316
1360.00925
1370.292
1380.605
1390.263
140.34
1400.596
1410.0561
1420.868
1430.615
1440.571
1450.24
1460.996
1470.579
1480.392
1490.678
150.255
1500.466
1510.863
1520.662
1530.517
1540.285
1550.183
1560.0145
1570.116
1580.356
1590.277
160.503
1600.337
1610.228
1620.886
1630.32
1640.0205
1650.9
1660.0181
1670.111
1680.704
1690.143
170.789
180.54
190.794
20.612
200.0942
210.13
220.928
230.0142
240.233
250.219
260.41
270.87
280.912
290.0066
30.879
300.394
310.696
320.187
330.141
340.267
350.789
360.0479
370.223
380.571
390.833
40.239
400.00591
410.346
420.765
430.896
440.0348
450.301
460.908
470.158
480.388
490.499
50.584
500.932
510.869
520.342
530.217
540.607
550.0609
560.788
570.286
580.703
590.82
60.877
600.879
610.0294
620.59
630.42
640.692
650.761
660.843
670.734
680.597
690.885
70.0194
700.851
710.00993
720.841
730.352
740.249
750.0986
760.175
770.294
780.1
790.937
80.0313
800.0559
810.522
820.301
830.439
840.352
850.0874
860.921
870.0068
880.989
890.513
90.72
900.0278
910.0082
920.37
930.207
940.805
950.011
960.593
970.888
980.712
990.705



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13499


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001737 (larynx)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000072 (segment of respiratory tract)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0001004 (respiratory system)
0001557 (upper respiratory tract)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000632 (group A streptococci treatment sample)
0104978 (HEp-2 cell sample)
0000639 (Streptococcus strain JRS4 treatment sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0011134 (human Hep-2 cells treated with Streptococci strain JRS4 sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

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