FF:11836-124G9: Difference between revisions

Latest revision as of 18:22, 4 June 2020

Name:	mesenchymal precursor cell - ovarian cancer left ovary, donor4
Species:	Human (Homo sapiens)
Library ID:	CNhs13094
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	ovary
dev stage	NA
sex	NA
age	NA
cell type	mesenchymal precursor cell
cell line	NA
company	NA
collaboration	Claudio Schneider LNCIB
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005599

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13094		CAGE		DRX008558		DRR009430

Accession ID Hg19

Library id		BAM		CTSS
CNhs13094		DRZ000855		DRZ002240

Accession ID Hg38

Library id		BAM		CTSS
CNhs13094		DRZ012205		DRZ013590

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.1
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.0535
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.00976
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.132
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.269
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.351
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0928
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0422
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0116
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.667
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.00636
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.457
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0133
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.262
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.262
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.151
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.425
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.425
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.365
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.425
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.488
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.686
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13094

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.668
MA0003.1	MA0003.1	0.905
MA0004.1	MA0004.1	0.127
MA0006.1	MA0006.1	0.95
MA0007.1	MA0007.1	0.378
MA0009.1	MA0009.1	0.759
MA0014.1	MA0014.1	0.401
MA0017.1	MA0017.1	0.709
MA0018.2	MA0018.2	1.24264e-5
MA0019.1	MA0019.1	0.227
MA0024.1	MA0024.1	9.85074e-4
MA0025.1	MA0025.1	6.26562e-4
MA0027.1	MA0027.1	0.299
MA0028.1	MA0028.1	0.017
MA0029.1	MA0029.1	0.882
MA0030.1	MA0030.1	0.00176
MA0031.1	MA0031.1	0.0606
MA0035.2	MA0035.2	0.0143
MA0038.1	MA0038.1	3.56012e-4
MA0039.2	MA0039.2	0.0353
MA0040.1	MA0040.1	0.766
MA0041.1	MA0041.1	0.811
MA0042.1	MA0042.1	0.839
MA0043.1	MA0043.1	1.80647e-6
MA0046.1	MA0046.1	0.111
MA0047.2	MA0047.2	0.798
MA0048.1	MA0048.1	0.482
MA0050.1	MA0050.1	0.139
MA0051.1	MA0051.1	0.071
MA0052.1	MA0052.1	0.0918
MA0055.1	MA0055.1	0.652
MA0057.1	MA0057.1	0.498
MA0058.1	MA0058.1	0.0659
MA0059.1	MA0059.1	0.826
MA0060.1	MA0060.1	2.75066e-15
MA0061.1	MA0061.1	0.954
MA0062.2	MA0062.2	1.51486e-7
MA0065.2	MA0065.2	0.775
MA0066.1	MA0066.1	0.641
MA0067.1	MA0067.1	0.0338
MA0068.1	MA0068.1	0.0221
MA0069.1	MA0069.1	0.425
MA0070.1	MA0070.1	0.596
MA0071.1	MA0071.1	0.632
MA0072.1	MA0072.1	0.0997
MA0073.1	MA0073.1	0.92
MA0074.1	MA0074.1	0.16
MA0076.1	MA0076.1	6.72387e-4
MA0077.1	MA0077.1	0.197
MA0078.1	MA0078.1	0.63
MA0079.2	MA0079.2	0.126
MA0080.2	MA0080.2	2.8403e-7
MA0081.1	MA0081.1	0.00338
MA0083.1	MA0083.1	0.0297
MA0084.1	MA0084.1	0.0504
MA0087.1	MA0087.1	0.976
MA0088.1	MA0088.1	0.826
MA0090.1	MA0090.1	0.0097
MA0091.1	MA0091.1	0.111
MA0092.1	MA0092.1	0.381
MA0093.1	MA0093.1	0.152
MA0099.2	MA0099.2	8.05117e-4
MA0100.1	MA0100.1	0.463
MA0101.1	MA0101.1	0.0333
MA0102.2	MA0102.2	0.137
MA0103.1	MA0103.1	0.00859
MA0104.2	MA0104.2	0.335
MA0105.1	MA0105.1	0.00102
MA0106.1	MA0106.1	0.135
MA0107.1	MA0107.1	0.0201
MA0108.2	MA0108.2	0.431
MA0111.1	MA0111.1	0.475
MA0112.2	MA0112.2	0.00216
MA0113.1	MA0113.1	0.647
MA0114.1	MA0114.1	0.712
MA0115.1	MA0115.1	0.187
MA0116.1	MA0116.1	3.38522e-4
MA0117.1	MA0117.1	0.705
MA0119.1	MA0119.1	0.00729
MA0122.1	MA0122.1	0.253
MA0124.1	MA0124.1	0.136
MA0125.1	MA0125.1	0.202
MA0131.1	MA0131.1	0.505
MA0135.1	MA0135.1	0.224
MA0136.1	MA0136.1	6.49593e-9
MA0137.2	MA0137.2	0.96
MA0138.2	MA0138.2	0.863
MA0139.1	MA0139.1	0.655
MA0140.1	MA0140.1	0.229
MA0141.1	MA0141.1	0.528
MA0142.1	MA0142.1	0.112
MA0143.1	MA0143.1	0.81
MA0144.1	MA0144.1	0.357
MA0145.1	MA0145.1	0.657
MA0146.1	MA0146.1	0.356
MA0147.1	MA0147.1	0.872
MA0148.1	MA0148.1	0.675
MA0149.1	MA0149.1	0.736
MA0150.1	MA0150.1	0.179
MA0152.1	MA0152.1	0.0282
MA0153.1	MA0153.1	0.867
MA0154.1	MA0154.1	0.0617
MA0155.1	MA0155.1	0.831
MA0156.1	MA0156.1	1.86458e-5
MA0157.1	MA0157.1	0.244
MA0159.1	MA0159.1	0.615
MA0160.1	MA0160.1	0.106
MA0162.1	MA0162.1	0.347
MA0163.1	MA0163.1	1.73058e-6
MA0164.1	MA0164.1	0.663
MA0258.1	MA0258.1	0.409
MA0259.1	MA0259.1	0.659

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13094

Novel motif	Logo	P-value
1	1	0.186
10	10	0.105
100	100	0.486
101	101	0.688
102	102	0.487
103	103	0.193
104	104	0.937
105	105	0.0056
106	106	0.0666
107	107	0.0332
108	108	0.61
109	109	0.842
11	11	0.14
110	110	0.0643
111	111	0.628
112	112	0.463
113	113	0.182
114	114	0.0144
115	115	0.0308
116	116	0.0748
117	117	0.26
118	118	0.875
119	119	0.738
12	12	0.201
120	120	0.166
121	121	0.915
122	122	0.0377
123	123	0.102
124	124	0.956
125	125	0.448
126	126	0.725
127	127	0.871
128	128	0.312
129	129	0.236
13	13	0.966
130	130	0.937
131	131	0.351
132	132	0.868
133	133	0.418
134	134	0.471
135	135	0.667
136	136	0.296
137	137	0.86
138	138	0.899
139	139	0.457
14	14	0.123
140	140	0.477
141	141	0.663
142	142	0.37
143	143	0.554
144	144	0.228
145	145	0.144
146	146	0.615
147	147	0.138
148	148	0.0147
149	149	0.353
15	15	0.29
150	150	0.216
151	151	0.714
152	152	0.431
153	153	0.524
154	154	0.717
155	155	0.0891
156	156	0.338
157	157	0.844
158	158	0.0678
159	159	0.108
16	16	0.0246
160	160	0.124
161	161	0.495
162	162	0.466
163	163	0.241
164	164	0.0583
165	165	0.374
166	166	0.00371
167	167	0.97
168	168	0.403
169	169	0.0772
17	17	0.289
18	18	0.0942
19	19	0.0611
2	2	0.476
20	20	0.416
21	21	0.286
22	22	0.507
23	23	0.0223
24	24	0.761
25	25	0.189
26	26	0.118
27	27	0.485
28	28	0.232
29	29	0.0912
3	3	0.109
30	30	0.937
31	31	0.561
32	32	1.40416e-7
33	33	0.7
34	34	0.79
35	35	0.293
36	36	0.254
37	37	0.027
38	38	0.694
39	39	0.0944
4	4	0.248
40	40	0.495
41	41	0.641
42	42	0.412
43	43	0.23
44	44	0.348
45	45	0.627
46	46	0.0283
47	47	0.488
48	48	0.33
49	49	0.917
5	5	0.564
50	50	0.526
51	51	0.593
52	52	0.998
53	53	0.208
54	54	0.367
55	55	0.271
56	56	0.8
57	57	0.459
58	58	0.969
59	59	0.0775
6	6	0.187
60	60	0.62
61	61	0.678
62	62	0.33
63	63	0.161
64	64	0.958
65	65	0.266
66	66	0.295
67	67	0.653
68	68	0.626
69	69	0.748
7	7	0.462
70	70	0.115
71	71	0.0421
72	72	0.419
73	73	0.311
74	74	0.291
75	75	0.459
76	76	0.777
77	77	0.0444
78	78	0.693
79	79	0.0342
8	8	0.0187
80	80	0.473
81	81	0.178
82	82	0.256
83	83	0.637
84	84	0.687
85	85	0.137
86	86	0.253
87	87	0.965
88	88	0.565
89	89	0.0691
9	9	0.385
90	90	0.114
91	91	0.14
92	92	0.203
93	93	0.909
94	94	0.661
95	95	0.837
96	96	0.689
97	97	0.422
98	98	0.243
99	99	0.0288

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13094

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000273 human mesenchymal precursor cell- ovarian cancer-left ovary sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002119 (left ovary)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000273 (human mesenchymal precursor cell- ovarian cancer-left ovary sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS008450
+|DRA_sample_Accession=CAGE@SAMD00005599
+|accession_numbers=CAGE;DRX008558;DRR009430;DRZ000855;DRZ002240;DRZ012205;DRZ013590
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002119,UBERON:0003100,UBERON:0000474
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034
@@ Line 8: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.81!63.45!TCF21;;chr2:19558373..19558392,-!p1@OSR1!1.63!111.56!OSR1;;chr1:170632285..170632309,+!p1@PRRX1!1.56!39.81!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.46!27.79!HOXC5;;chr17:1959369..1959388,+!p2@HIC1!1.39!60.13!HIC1;;chr5:92918919..92918942,+!p1@NR2F1!1.38!99.11!NR2F1;;chr11:46299539..46299620,+!p2@CREB3L1!1.35!36.08!CREB3L1;;chr11:46299199..46299233,+!p1@CREB3L1!1.34!104.51!CREB3L1;;chr16:86600426..86600441,+!p1@FOXC2!1.33!49.35!FOXC2;;chr18:19749541..19749557,+!p1@GATA6!1.31!60.55!GATA6;;chr2:239756671..239756732,+!p1@TWIST2!1.26!54.74!TWIST2;;chr12:66218255..66218304,+!p3@HMGA2!1.26!45.62!HMGA2;;chr18:19749386..19749404,+!p2@GATA6!1.26!24.47!GATA6;;chr1:170632959..170632987,+!p4@PRRX1!1.26!18.66!PRRX1;;chr12:66218598..66218645,+!p2@HMGA2!1.23!73.40!HMGA2;;chr12:54422217..54422239,+!p3@HOXC6!1.21!15.34!HOXC6;;chr12:54402745..54402788,+!p1@HOXC8!1.19!14.51!HOXC8;;chr19:13134772..13134822,+!p2@NFIX!1.14!18.66!NFIX;;chr2:102091144..102091183,-!p2@RFX8!1.13!12.44!RFX8;;chr19:45971246..45971265,+!p1@FOSB!1.11!220.62!FOSB;;chr20:50179368..50179392,-!p2@NFATC2!1.10!14.93!NFATC2;;chr11:32457075..32457095,-!p1@WT1!1.09!11.20!WT1;;chr12:52445218..52445237,+!p1@NR4A1!1.07!136.44!NR4A1;;chr2:239756739..239756755,+!p2@TWIST2!1.07!18.66!TWIST2;;chr12:66218212..66218244,+!p5@HMGA2!1.04!14.51!HMGA2;;chr2:66662281..66662308,+!p1@MEIS1!1.02!33.18!MEIS1;;chr1:170633348..170633399,+!p2@PRRX1!1.02!12.86!PRRX1;;chr15:67430351..67430366,+!p10@SMAD3!1.02!9.54!SMAD3;;chr15:96874145..96874166,+!p7@NR2F2!1.00!17.42!NR2F2;;chr12:66218183..66218209,+!p4@HMGA2!1.00!17.42!HMGA2;;chr15:96874012..96874042,+!p2@NR2F2!0.99!81.70!NR2F2;;chr8:106330656..106330684,+!p1@ZFPM2!0.98!22.81!ZFPM2;;chr11:65686802..65686818,+!p6@DRAP1!0.98!14.93!DRAP1;;chr12:54402790..54402805,+!p2@HOXC8!0.97!8.29!HOXC8;;chr2:176994408..176994492,+!p1@HOXD8!0.97!8.29!HOXD8;;chr12:66218836..66218888,+!p1@HMGA2!0.96!78.79!HMGA2;;chr15:96874244..96874259,+!p5@NR2F2!0.95!19.49!NR2F2;;chr1:170633262..170633285,+!p3@PRRX1!0.95!9.12!PRRX1;;chr5:92918956..92918969,+!p4@NR2F1!0.95!8.71!NR2F1;;chr2:102091566..102091581,-!p1@RFX8!0.95!7.88!RFX8;;chr9:16705069..16705086,-!p3@BNC2!0.95!7.88!BNC2;;chr19:13134457..13134462,+!p5@NFIX!0.93!13.69!NFIX;;chr4:81104985..81105005,+!p4@PRDM8!0.93!9.12!PRDM8;;chr8:93107451..93107468,-!p2@RUNX1T1!0.93!7.46!RUNX1T1;;chr15:96873984..96873999,+!p3@NR2F2!0.92!55.99!NR2F2;;chr17:7492684..7492778,-!p2@SOX15!0.92!15.76!SOX15;;chr11:65687362..65687436,+!p3@DRAP1!0.91!33.59!DRAP1;;chr4:81105027..81105039,+!p3@PRDM8!0.91!8.29!PRDM8;;chr19:54041669..54041697,+!p2@ZNF331!0.91!7.05!ZNF331;;chr18:19749517..19749531,+!p3@GATA6!0.90!12.86!GATA6;;chr18:53068911..53068935,-!p4@TCF4!0.90!7.88!TCF4;;chr5:92918894..92918912,+!p2@NR2F1!0.88!22.39!NR2F1;;chr17:46622070..46622109,-!p1@HOXB2!0.88!15.34!HOXB2;;chr21:36260343..36260402,-!p6@RUNX1!0.88!10.78!RUNX1;;chr11:46299186..46299195,+!p3@CREB3L1!0.88!7.46!CREB3L1;;chr16:31076332..31076388,-!p3@ZNF668!0.88!6.64!ZNF668;;chr19:13135386..13135435,+!p4@NFIX!0.88!6.64!NFIX;;chr9:102584262..102584276,+!p1@NR4A3!0.87!14.93!NR4A3;;chr3:141121847..141121868,+!p5@ZBTB38!0.87!9.95!ZBTB38;;chr7:44143925..44143970,+!p1@AEBP1!0.86!148.05!AEBP1;;chr8:99956662..99956684,+!p1@OSR2!0.86!9.95!OSR2;;chr8:40755333..40755352,-!p1@ZMAT4!0.86!6.22!ZMAT4;;chr12:54410948..54410992,+!p3@HOXC5!0.86!6.22!HOXC5;;chr17:1958388..1958404,+!p1@HIC1!0.85!41.47!HIC1;;chr2:157189180..157189290,-!p1@NR4A2!0.83!32.35!NR4A2;;chr17:46621937..46621966,-!p2@HOXB2!0.83!16.59!HOXB2;;chr1:170632250..170632277,+!p7@PRRX1!0.83!5.81!PRRX1;;chr9:110252035..110252057,-!p1@KLF4!0.82!97.04!KLF4;;chr5:137804484..137804498,+!p2@EGR1!0.81!23.64!EGR1;;chr15:96874216..96874236,+!p13@NR2F2!0.81!8.71!NR2F2;;chr8:106330696..106330719,+!p2@ZFPM2!0.81!7.05!ZFPM2;;chr19:46801639..46801699,+!p1@HIF3A!0.81!5.39!HIF3A;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.81!5.39!HOXC5;;chr5:92919100..92919135,+!p3@NR2F1!0.80!6.64!NR2F1;;chr7:44143978..44143989,+!p2@AEBP1!0.79!9.95!AEBP1;;chr19:31840130..31840160,-!p2@TSHZ3!0.79!8.29!TSHZ3;;chr3:141087393..141087426,+!p3@ZBTB38!0.78!21.56!ZBTB38;;chr2:66662396..66662407,+!p4@MEIS1!0.78!4.98!MEIS1;;chr11:46333934..46333963,+!p5@CREB3L1!0.78!4.98!CREB3L1;;chr8:25902876..25902936,-!p1@EBF2!0.78!4.98!EBF2;;chr19:54058073..54058088,+!p1@ZNF331!0.78!4.98!ZNF331;;chr1:170632723..170632739,+!p8@PRRX1!0.78!4.98!PRRX1;;chr15:96874927..96874938,+!p8@NR2F2!0.77!11.20!NR2F2;;chr21:36260295..36260310,-!p3@RUNX1!0.77!8.29!RUNX1;;chr6:34204921..34204939,+!p3@HMGA1!0.76!156.76!HMGA1;;chr15:96869511..96869525,+!p16@NR2F2!0.76!5.39!NR2F2;;chr8:49833978..49833996,-!p1@SNAI2!0.75!106.16!SNAI2;;chr5:158526917..158526932,-!p1@EBF1!0.75!12.44!EBF1;;chr3:5021268..5021282,+!p4@BHLHE40!0.75!9.95!BHLHE40;;chr2:66662510..66662521,+!p6@MEIS1!0.75!4.56!MEIS1;;chr6:28321909..28321965,-!p3@ZNF323!0.75!4.56!ZNF323;;chr11:46299443..46299459,+!p4@CREB3L1!0.75!4.56!CREB3L1;;chr12:54447637..54447659,+!p4@HOXC4!0.75!4.56!HOXC4;;chr12:54447686..54447704,+!p5@HOXC4!0.75!4.56!HOXC4;;chr11:65686732..65686756,+!p2@DRAP1!0.74!20.74!DRAP1;;chr6:106546808..106546833,+!p3@PRDM1!0.74!5.81!PRDM1;;chr17:70117153..70117174,+!p1@SOX9!0.73!50.18!SOX9;;chr7:44143997..44144008,+!p3@AEBP1!0.73!5.81!AEBP1;;chr1:151032860..151032918,+!p1@MLLT11!0.71!55.99!MLLT11;;chr17:46622114..46622138,-!p4@HOXB2!0.71!6.64!HOXB2;;chr3:141121820..141121838,+!p9@ZBTB38!0.71!4.15!ZBTB38;;chr12:54402729..54402743,+!p3@HOXC8!0.71!4.15!HOXC8;;chr12:54422245..54422263,+!p7@HOXC6!0.71!4.15!HOXC6;;chr12:115121962..115121987,-!p1@TBX3!0.70!38.57!TBX3;;chr11:65687158..65687216,+!p4@DRAP1!0.70!25.71!DRAP1;;chr2:66662249..66662267,+!p2@MEIS1!0.70!17.42!MEIS1;;chr6:85473156..85473210,-!p2@TBX18!0.70!4.98!TBX18;;chr14:75745523..75745537,+!p1@FOS!0.69!542.02!FOS;;chr15:96873921..96873946,+!p1@NR2F2!0.69!125.66!NR2F2;;chr7:14029283..14029311,-!p1@ETV1!0.69!23.22!ETV1;;chr19:31840313..31840380,-!p1@TSHZ3!0.68!10.78!TSHZ3;;chr11:65687222..65687240,+!p7@DRAP1!0.68!4.98!DRAP1;;chr5:92919375..92919438,+!p6@NR2F1!0.68!4.15!NR2F1;;chr5:142780237..142780261,-!p7@NR3C1!0.68!3.73!NR3C1;;chr12:54426831..54426836,+!p10@HOXC5!0.68!3.73!HOXC5;;chr1:170632115..170632136,+!p9@PRRX1!0.68!3.73!PRRX1;;chr1:170632137..170632172,+!p10@PRRX1!0.68!3.73!PRRX1;;chr1:44513995..44514031,+!p1@KLF17!0.68!3.73!KLF17;;chr15:96869206..96869220,+!p21@NR2F2!0.68!3.73!NR2F2;;chr16:86600870..86600921,+!p2@FOXC2!0.68!3.73!FOXC2;;chr2:102091478..102091490,-!p3@RFX8!0.68!3.73!RFX8;;chr2:19558327..19558334,-!p2@OSR1!0.68!3.73!OSR1;;chr8:49833948..49833973,-!p2@SNAI2!0.67!26.96!SNAI2;;chr9:2158443..2158481,+!p2@SMARCA2!0.67!11.61!SMARCA2;;chr6:34204672..34204692,+!p1@HMGA1!0.66!471.52!HMGA1;;chr1:158979792..158979814,+!p2@IFI16!0.66!39.81!IFI16;;chr7:19157043..19157088,-!p2@TWIST1!0.66!9.95!TWIST1;;chr9:102584159..102584174,+!p2@NR4A3!0.66!7.05!NR4A3;;chr15:96876966..96877017,+!p12@NR2F2!0.66!5.39!NR2F2;;chr12:54447599..54447630,+!p3@HOXC4!0.66!4.56!HOXC4;;chr19:13106214..13106382,+!p1@NFIX!0.65!94.97!NFIX;;chr12:124873357..124873401,-!p1@NCOR2!0.65!47.28!NCOR2;;chr12:66218378..66218401,+!p6@HMGA2!0.65!5.81!HMGA2;;chr12:72056800..72056834,+!p1@THAP2!0.65!4.98!THAP2;;chr5:137801160..137801176,+!p1@EGR1!0.64!397.70!EGR1;;chr15:37392724..37392757,-!p1@MEIS2!0.64!17.83!MEIS2;;chr3:114343768..114343822,-!p1@ZBTB20!0.64!17.00!ZBTB20;;chr2:121493425..121493474,+!p1@GLI2!0.64!8.29!GLI2;;chr15:96869255..96869291,+!p6@NR2F2!0.64!6.64!NR2F2;;chr12:66218573..66218596,+!p7@HMGA2!0.64!5.39!HMGA2;;chr5:92919068..92919082,+!p5@NR2F1!0.64!4.15!NR2F1;;chr6:28321971..28321995,-!p1@ZNF323!0.64!3.32!ZNF323;;chr12:54393880..54393962,+!p1@HOXC9!0.64!3.32!HOXC9;;chr12:54422268..54422278,+!p8@HOXC6!0.64!3.32!HOXC6;;chr12:66218904..66218913,+!p11@HMGA2!0.64!3.32!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.64!3.32!HMGA2;;chr15:67430381..67430396,+!p21@SMAD3!0.64!3.32!SMAD3;;chr16:86601052..86601066,+!p4@FOXC2!0.64!3.32!FOXC2;;chr18:19749353..19749367,+!p4@GATA6!0.64!3.32!GATA6;;chr1:170633058..170633084,+!p5@PRRX1!0.64!3.32!PRRX1;;chr8:77593474..77593612,+!p1@ZFHX4!0.63!16.17!ZFHX4;;chr11:65667884..65667895,-!p2@FOSL1!0.63!14.51!FOSL1;;chr15:96881221..96881240,+!p19@NR2F2!0.63!4.56!NR2F2;;chr7:14029312..14029325,-!p4@ETV1!0.63!4.15!ETV1;;chr1:158979872..158979898,+!p3@IFI16!0.62!11.20!IFI16;;chr19:22235279..22235301,+!p1@ZNF257!0.62!6.64!ZNF257;;chr17:38256799..38256815,-!p3@NR1D1!0.62!6.22!NR1D1;;chr16:86544113..86544145,+!p1@FOXF1!0.62!4.15!FOXF1;;chr2:66662895..66662907,+!p3@MEIS1!0.62!4.15!MEIS1;;chr15:96874063..96874074,+!p10@NR2F2!0.61!6.22!NR2F2;;chr12:66218443..66218461,+!p8@HMGA2!0.61!4.15!HMGA2;;chr2:145275162..145275202,-!p2@ZEB2!0.60!21.15!ZEB2;;chr2:121493492..121493537,+!p2@GLI2!0.60!5.39!GLI2;;chr9:110251836..110251887,-!p4@KLF4!0.60!4.15!KLF4;;chr10:64134120..64134183,+!p1@ZNF365!0.60!3.73!ZNF365;;chr15:37392576..37392589,-!p12@MEIS2!0.60!3.73!MEIS2;;chr15:96869114..96869160,+!p11@NR2F2!0.59!4.15!NR2F2;;chr17:46622440..46622477,-!p5@HOXB2!0.59!3.32!HOXB2;;chr5:92918860..92918871,+!p10@NR2F1!0.59!3.32!NR2F1;;chr3:21792585..21792625,-!p2@ZNF385D!0.59!3.32!ZNF385D;;chr2:66662697..66662711,+!p8@MEIS1!0.59!2.90!MEIS1;;chr6:152011654..152011682,+!p1@ESR1!0.59!2.90!ESR1;;chr8:77593448..77593471,+!p2@ZFHX4!0.59!2.90!ZFHX4;;chr8:93115274..93115323,-!p4@RUNX1T1!0.59!2.90!RUNX1T1;;chr16:86600458..86600461,+!p3@FOXC2!0.59!2.90!FOXC2;;chr9:16728327..16728338,-!p5@BNC2!0.59!2.90!BNC2;;chr11:32456954..32456965,-!p4@WT1!0.59!2.90!WT1;;chr12:45444873..45444888,-!p1@DBX2!0.59!2.90!DBX2;;chr12:66357214..66357233,+!p13@HMGA2!0.59!2.90!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.59!2.90!HMGA2;;chr1:170632477..170632506,+!p6@PRRX1!0.59!2.90!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.59!2.90!PRRX1;;chr1:170633194..170633205,+!p18@PRRX1!0.59!2.90!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.59!2.90!PRRX1;;chr1:197886461..197886558,+!p1@LHX9!0.59!2.90!LHX9;;chr14:62203595..62203676,+!p4@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@@ Line 39: / Line 41: @@
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@@ Line 48: / Line 60: @@
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-}} {{DRAAccessionNumbers
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-|DRA_sample_Accession=CAGE@DRS008450
-|accession_numbers=DRX008558;DRR009430;DRZ000855;DRZ002240;CAGE
-|library_id=CNhs13094
 }}

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FF:11836-124G9: Difference between revisions

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Latest revision as of 18:22, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0