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{{f5samples
{{f5samples
|id=FF:11517-119H5
|DRA_sample_Accession=CAGE@SAMD00005877
|name=Renal Epithelial Cells, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005877
|sample_id=11517
|accession_numbers=CAGE;DRX008427;DRR009299;DRZ000724;DRZ002109;DRZ012074;DRZ013459
|rna_tube_id=119H5
|accession_numbers_RNASeq=sRNA-Seq;DRX037176;DRR041542;DRZ007184
|rna_box=119
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002113,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0000064,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0006555,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003103,UBERON:0009569,UBERON:0004211,UBERON:0009773,UBERON:0000489,UBERON:0005177,UBERON:0005172,UBERON:0001231,UBERON:0004819,UBERON:0005173,UBERON:0004810,UBERON:0001285,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0007684,UBERON:0000916
|rna_position=H5
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:1000497,CL:0002518,CL:1000449,CL:1000507,CL:1000494
|sample_cell_lot=N/A
|sample_cell_catalog=lot:0546
|sample_company=Sciencell/3H
|rna_lot_number=
|rna_catalog_number=SC4125
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=kidney
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.6
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=epithelial cell of kidney
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1.23
|sample_note=
|profile_hcage=CNhs11332,LSID768,release014,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10011,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000144,CL:0000255,CL:0000548,CL:0002371,CL:0002518,CL:1000494,CL:1000497,CL:1000507
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000058,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000080,UBERON:0000083,UBERON:0000119,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000489,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001008,UBERON:0001062,UBERON:0001231,UBERON:0001285,UBERON:0002050,UBERON:0002100,UBERON:0002113,UBERON:0002120,UBERON:0002417,UBERON:0002532,UBERON:0002553,UBERON:0003060,UBERON:0003064,UBERON:0003074,UBERON:0003081,UBERON:0003103,UBERON:0003104,UBERON:0003220,UBERON:0003886,UBERON:0003887,UBERON:0003914,UBERON:0003918,UBERON:0004111,UBERON:0004120,UBERON:0004211,UBERON:0004810,UBERON:0004819,UBERON:0004875,UBERON:0004876,UBERON:0005095,UBERON:0005103,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005291,UBERON:0005423,UBERON:0005721,UBERON:0005754,UBERON:0006553,UBERON:0006554,UBERON:0006555,UBERON:0007684,UBERON:0007687,UBERON:0009142,UBERON:0009201
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000151
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!2.30!197.66!PAX8;;chr17:36105042..36105060,-!p1@HNF1B!2.28!188.24!HNF1B;;chr1:201979703..201979721,+!p2@ELF3!2.08!120.01!ELF3;;chr17:46703687..46703740,-!p1@HOXB9!2.06!113.73!HOXB9;;chr1:201979743..201979762,+!p1@ELF3!1.98!94.12!ELF3;;chr17:46682321..46682362,-!p1@HOXB6!1.75!54.90!HOXB6;;chr6:134210243..134210257,+!p1@TCF21!1.67!45.49!TCF21;;chr16:86600426..86600441,+!p1@FOXC2!1.65!105.10!FOXC2;;chr7:27153454..27153469,-!p2@HOXA3!1.60!38.43!HOXA3;;chr6:34204921..34204939,+!p3@HMGA1!1.56!995.34!HMGA1;;chr7:27205136..27205164,-!p1@HOXA9!1.52!32.16!HOXA9;;chr17:35294075..35294102,+!p1@ENST00000559335!1.47!28.24!LHX1;;chr11:61520075..61520136,+!p1@C11orf9!1.46!57.26!C11orf9;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.45!27.45!HOXC5;;chr17:46622205..46622218,-!p3@HOXB2!1.42!29.02!HOXB2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.42!25.10!POU3F3;;chr19:45260775..45260838,+!p5@BCL3!1.39!30.59!BCL3;;chr21:38071430..38071456,+!p1@SIM2!1.39!23.53!SIM2;;chr20:42295745..42295765,+!p1@MYBL2!1.37!349.82!MYBL2;;chr10:102505493..102505546,+!p2@PAX2!1.36!21.96!PAX2;;chr6:34204672..34204692,+!p1@HMGA1!1.35!2298.14!HMGA1;;chr20:42295713..42295738,+!p2@MYBL2!1.35!123.14!MYBL2;;chr7:27196217..27196246,-!p2@HOXA7!1.31!19.61!HOXA7;;chr7:27205106..27205134,-!p2@HOXA9!1.31!19.61!HOXA9;;chr17:46703826..46703845,-!p3@HOXB9!1.30!18.82!HOXB9;;chr5:2751762..2751784,-!p1@IRX2!1.26!17.26!IRX2;;chr5:72744594..72744609,-!p1@FOXD1!1.22!70.59!FOXD1;;chr7:27224795..27224840,-!p2@HOXA11!1.20!14.90!HOXA11;;chr7:27224842..27224872,-!p1@HOXA11!1.20!14.90!HOXA11;;chr17:41623692..41623715,-!p1@ETV4!1.18!59.61!ETV4;;chr12:66218255..66218304,+!p3@HMGA2!1.18!37.65!HMGA2;;chr1:209979467..209979494,-!p1@IRF6!1.18!15.69!IRF6;;chr11:32457075..32457095,-!p1@WT1!1.18!14.12!WT1;;chr17:46690839..46690884,-!p1@HOXB8!1.18!14.12!HOXB8;;chr19:17356436..17356481,-!p3@NR2F6!1.17!23.53!NR2F6;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.17!14.90!GLIS1;;chr17:46622229..46622257,-!p6@HOXB2!1.16!15.69!HOXB2;;chr7:27192185..27192209,-!p1@HOXA3!1.16!13.33!HOXA3;;chr12:54378923..54378966,+!p1@HOXC10!1.16!13.33!HOXC10;;chr12:54393880..54393962,+!p1@HOXC9!1.16!13.33!HOXC9;;chr20:31350184..31350200,+!p1@DNMT3B!1.13!25.88!DNMT3B;;chr20:50721803..50721857,-!p2@ZFP64!1.11!18.82!ZFP64;;chr5:3595934..3595957,+!p2@IRX1!1.11!11.77!IRX1;;chr17:46675558..46675577,-!p2@HOXB6!1.11!11.77!HOXB6;;chr2:5832508..5832524,+!p1@SOX11!1.11!11.77!SOX11;;chr2:176987441..176987454,+!p1@HOXD9!1.08!10.98!HOXD9;;chr2:176994408..176994492,+!p1@HOXD8!1.08!10.98!HOXD8;;chr7:27170359..27170381,-!p1@HOXA4!1.08!10.98!HOXA4;;chr7:27213893..27213954,-!p1@HOXA10!1.08!10.98!HOXA10;;chr17:46667594..46667619,-!p1@HOXB3!1.08!10.98!HOXB3;;chr12:3069037..3069119,+!p2@TEAD4!1.06!36.86!TEAD4;;chr17:41622765..41622821,-!p2@ETV4!1.05!15.69!ETV4;;chr16:54964740..54964789,+!p1@IRX5!1.05!14.90!IRX5;;chr17:36105074..36105086,-!p2@HNF1B!1.05!10.20!HNF1B;;chr10:102505327..102505344,+!p1@PAX2!1.05!10.20!PAX2;;chr3:52001448..52001478,-!p2@PCBP4!1.04!139.61!PCBP4;;chr11:65667846..65667868,-!p1@FOSL1!1.03!260.40!FOSL1;;chr17:38465413..38465438,+!p5@RARA!1.03!15.69!RARA;;chr11:65667884..65667895,-!p2@FOSL1!1.02!37.65!FOSL1;;chr6:10415276..10415341,-!p2@TFAP2A!1.02!11.77!TFAP2A;;chr5:3595977..3595999,+!p1@IRX1!1.02!9.41!IRX1;;chr16:51185172..51185197,-!p1@SALL1!1.02!9.41!SALL1;;chr17:7493405..7493419,-!p1@SOX15!1.02!9.41!SOX15;;chr2:177053386..177053402,+!p1@HOXD1!1.02!9.41!HOXD1;;chr5:72744445..72744466,-!p2@FOXD1!1.01!15.69!FOXD1;;chr7:44143925..44143970,+!p1@AEBP1!0.99!202.36!AEBP1;;chr3:52001426..52001447,-!p3@PCBP4!0.99!25.10!PCBP4;;chr3:69811858..69811881,+!p5@MITF!0.98!8.63!MITF;;chr7:27153428..27153440,-!p3@HOXA3!0.98!8.63!HOXA3;;chr16:86600870..86600921,+!p2@FOXC2!0.98!8.63!FOXC2;;chr12:54379029..54379057,+!p2@HOXC10!0.98!8.63!HOXC10;;chr19:49865646..49865718,-!p1@TEAD2!0.96!71.38!TEAD2;;chr12:2986206..2986258,-!p2@FOXM1!0.96!50.20!FOXM1;;chr2:239148671..239148686,-!p1@HES6!0.96!30.59!HES6;;chr14:21994337..21994442,-!p1@SALL2!0.96!22.75!SALL2;;chr17:41623009..41623053,-!p4@ETV4!0.96!13.33!ETV4;;chr16:54320158..54320200,-!p5@IRX3!0.96!11.77!IRX3;;chr17:46622070..46622109,-!p1@HOXB2!0.95!18.04!HOXB2;;chr21:38071403..38071428,+!p2@SIM2!0.95!7.84!SIM2;;chr6:50786591..50786614,+!p1@TFAP2B!0.95!7.84!TFAP2B;;chr7:27196267..27196311,-!p1@HOXA7!0.95!7.84!HOXA7;;chr17:70117153..70117174,+!p1@SOX9!0.94!82.36!SOX9;;chr3:52001396..52001425,-!p4@PCBP4!0.94!14.12!PCBP4;;chr12:66218003..66218018,+!p9@HMGA2!0.94!9.41!HMGA2;;chr17:46622440..46622477,-!p5@HOXB2!0.94!8.63!HOXB2;;chr1:935467..935484,-!p1@HES4!0.93!34.51!HES4;;chr16:54320675..54320715,-!p1@IRX3!0.93!16.47!IRX3;;chr12:54447599..54447630,+!p3@HOXC4!0.93!9.41!HOXC4;;chr7:28448965..28448994,+!p2@CREB5!0.92!26.67!CREB5;;chr11:63684602..63684664,-!p1@RCOR2!0.92!14.90!RCOR2;;chr16:86600458..86600461,+!p3@FOXC2!0.91!7.06!FOXC2;;chr17:46667561..46667572,-!p4@HOXB3!0.91!7.06!HOXB3;;chr2:122042770..122042785,-!p1@TFCP2L1!0.91!7.06!TFCP2L1;;chr3:69811882..69811898,+!p6@MITF!0.91!7.06!MITF;;chr16:8962853..8962878,-!p1@CARHSP1!0.90!429.04!CARHSP1;;chr16:29817789..29817838,+!p2@MAZ!0.90!98.04!MAZ;;chr17:46688334..46688385,-!p1@HOXB7!0.90!10.20!HOXB7;;chr12:66218183..66218209,+!p4@HMGA2!0.89!13.33!HMGA2;;chr6:34204642..34204664,+!p2@HMGA1!0.88!938.08!HMGA1;;chr12:2986275..2986363,-!p1@FOXM1!0.88!69.02!FOXM1;;chr19:19516464..19516492,+!p4@GATAD2A!0.88!34.51!GATAD2A;;chr6:1610293..1610310,+!p1@FOXC1!0.87!10.98!FOXC1;;chr17:41622834..41622883,-!p6@ETV4!0.87!7.84!ETV4;;chr20:32274179..32274213,-!p1@E2F1!0.86!43.92!E2F1;;chr11:65686952..65686975,+!p5@DRAP1!0.86!36.08!DRAP1;;chr22:41697497..41697515,+!p2@ZC3H7B!0.86!18.04!ZC3H7B;;chr11:46299539..46299620,+!p2@CREB3L1!0.86!10.98!CREB3L1;;chr10:102505954..102505973,+!p3@PAX2!0.86!6.27!PAX2;;chr17:46667628..46667642,-!p2@HOXB3!0.86!6.27!HOXB3;;chr17:46671504..46671541,-!p2@HOXB5!0.86!6.27!HOXB5;;chr17:46692318..46692362,-!p5@HOXB8!0.86!6.27!HOXB8;;chr7:27196196..27196210,-!p5@HOXA7!0.86!6.27!HOXA7;;chr7:27219754..27219759,-!p16@HOXA10!0.86!6.27!HOXA10;;chr2:176969228..176969260,+!p1@HOXD11!0.86!6.27!HOXD11;;chr6:41514078..41514158,+!p1@FOXP4!0.85!58.83!FOXP4;;chr17:7492684..7492778,-!p2@SOX15!0.85!13.33!SOX15;;chr17:41622925..41622976,-!p3@ETV4!0.85!9.41!ETV4;;chr15:83953397..83953425,-!p1@BNC1!0.85!7.06!BNC1;;chr15:67357924..67357952,+!p2@SMAD3!0.84!42.35!SMAD3;;chr5:176738887..176738934,-!p1@MXD3!0.84!42.35!MXD3;;chr16:29818160..29818188,+!p6@MAZ!0.84!29.81!MAZ;;chr12:66218598..66218645,+!p2@HMGA2!0.84!29.02!HMGA2;;chr8:145669791..145669834,-!p1@TONSL!0.84!18.04!TONSL;;chr16:8962544..8962584,-!p2@CARHSP1!0.84!14.12!CARHSP1;;chr16:54320101..54320125,-!p4@IRX3!0.84!8.63!IRX3;;chr17:3571887..3571918,-!p2@TAX1BP3!0.83!69.81!TAX1BP3;;chr14:61116183..61116208,-!p1@SIX1!0.83!23.53!SIX1;;chr6:34204973..34204990,+!p4@HMGA1!0.82!80.79!HMGA1;;chr11:46299199..46299233,+!p1@CREB3L1!0.82!31.37!CREB3L1;;chr1:8938766..8938774,-!p2@ENO1!0.81!406.29!ENO1;;chr7:44143738..44143760,+!p4@AEBP1!0.81!6.27!AEBP1;;chr5:3595961..3595975,+!p3@IRX1!0.81!5.49!IRX1;;chr7:27219833..27219845,-!p7@HOXA10!0.81!5.49!HOXA10;;chr11:32457413..32457431,-!p2@WT1!0.81!5.49!WT1;;chr17:46692457..46692484,-!p2@HOXB8!0.81!5.49!HOXB8;;chr17:46692624..46692659,-!p3@HOXB8!0.81!5.49!HOXB8;;chr2:45236540..45236577,-!p1@SIX2!0.81!5.49!SIX2;;chr9:4300050..4300118,-!p1@GLIS3!0.79!36.86!GLIS3;;chr11:65686802..65686818,+!p6@DRAP1!0.79!9.41!DRAP1;;chr12:66218212..66218244,+!p5@HMGA2!0.79!7.84!HMGA2;;chr20:50159198..50159299,-!p1@NFATC2!0.79!7.84!NFATC2;;chr8:128748308..128748324,+!p2@MYC!0.78!153.73!MYC;;chr16:29817841..29817865,+!p1@MAZ!0.78!116.87!MAZ;;chr19:59031131..59031193,-!p1@ZBTB45!0.78!71.38!ZBTB45;;chr12:124873852..124873881,-!p3@NCOR2!0.78!32.94!NCOR2;;chr19:45252008..45252024,+!p2@BCL3!0.78!18.04!BCL3;;chr17:3571863..3571881,-!p1@TAX1BP3!0.77!380.41!TAX1BP3;;chr19:46271505..46271575,-!p2@SIX5!0.77!13.33!SIX5;;chr19:57183114..57183145,-!p1@ZNF835!0.77!5.49!ZNF835;;chr19:56652643..56652683,+!p1@ZNF444!0.76!28.24!ZNF444;;chr10:48355030..48355090,+!p1@ZNF488!0.76!6.27!ZNF488;;chr1:54203698..54203719,-!p@chr1:54203698..54203719,-!0.76!4.71!GLIS1;;chr16:51185573..51185593,-!p3@SALL1!0.76!4.71!SALL1;;chr16:54964899..54964914,+!p2@IRX5!0.76!4.71!IRX5;;chr17:41622731..41622764,-!p5@ETV4!0.76!4.71!ETV4;;chr17:46703212..46703238,-!p2@HOXB9!0.76!4.71!HOXB9;;chr5:2751785..2751808,-!p2@IRX2!0.76!4.71!IRX2;;chr6:34210478..34210481,+!p8@HMGA1!0.76!4.71!HMGA1;;chr7:27183291..27183324,-!p1@HOXA5!0.76!4.71!HOXA5;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!0.76!4.71!POU3F3;;chr2:176987463..176987479,+!p2@HOXD9!0.76!4.71!HOXD9;;chr2:177016272..177016286,+!p2@HOXD4!0.76!4.71!HOXD4;;chr2:177016336..177016350,+!p1@HOXD4!0.76!4.71!HOXD4;;chr2:45236579..45236596,-!p2@SIX2!0.76!4.71!SIX2;;chr4:299227..299272,-!p1@ZNF732!0.76!4.71!ZNF732;;chr10:135122380..135122458,+!p1@ZNF511!0.75!157.65!ZNF511;;chr19:45251943..45252006,+!p1@BCL3!0.75!134.91!BCL3;;chr19:1863591..1863611,-!p2@KLF16!0.75!49.41!KLF16;;chr19:19516507..19516539,+!p7@GATAD2A!0.75!14.90!GATAD2A;;chr17:46675420..46675465,-!p3@HOXB6!0.75!5.49!HOXB6;;chr19:6424783..6424802,-!p2@KHSRP!0.74!101.18!KHSRP;;chr2:242576460..242576600,-!p1@THAP4!0.74!75.30!THAP4;;chr11:65687362..65687436,+!p3@DRAP1!0.74!22.75!DRAP1;;chr16:29818199..29818216,+!p11@MAZ!0.74!7.84!MAZ;;chr2:25475120..25475176,-!p2@DNMT3A!0.74!6.27!DNMT3A;;chr17:38498510..38498540,+!p7@RARA!0.74!5.49!RARA;;chr19:6424813..6424835,-!p1@KHSRP!0.73!304.33!KHSRP;;chr19:1863568..1863586,-!p1@KLF16!0.73!159.22!KLF16;;chr19:3572925..3573014,+!p1@HMG20B!0.73!144.32!HMG20B;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.73!49.41!GLIS2;;chr11:65686732..65686756,+!p2@DRAP1!0.73!20.39!DRAP1;;chr14:21994449..21994524,-!p2@SALL2!0.73!14.12!SALL2;;chr12:66218378..66218401,+!p6@HMGA2!0.73!7.06!HMGA2;;chr19:49864746..49864780,-!p2@TEAD2!0.73!6.27!TEAD2;;chr12:132628963..132629027,+!p1@NOC4L!0.72!69.02!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Line 66: Line 42:
|fonse_treatment=
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|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Renal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11332.11517-119H5.hg38.nobarcode.ctss.bed.gz
|id=FF:11517-119H5
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|is_obsolete=
|library_id=CNhs11332
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|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11517
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10011.CCGTCC.11517
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|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10011.CCGTCC.11517
|name=Renal Epithelial Cells, donor1
|namespace=FANTOM5
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|rna_box=119
|rna_catalog_number=SC4125
|rna_concentration=1.23
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=H5
|rna_rin=9.6
|rna_sample_type=total RNA
|rna_tube_id=119H5
|rna_weight_ug=10
|rnaseq_library_id=SRhi10011.CCGTCC
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=lot:0546
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=epithelial cell of kidney
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.5296295958441e-216!GO:0005737;cytoplasm;1.45551920691467e-173!GO:0043226;organelle;2.17050851633684e-158!GO:0043229;intracellular organelle;2.86665007937897e-158!GO:0043231;intracellular membrane-bound organelle;3.6222481905241e-150!GO:0043227;membrane-bound organelle;9.02193977472901e-150!GO:0044444;cytoplasmic part;8.19287524819507e-121!GO:0044422;organelle part;7.07817774799807e-120!GO:0044446;intracellular organelle part;8.01178421253383e-119!GO:0005515;protein binding;2.42779695221312e-74!GO:0032991;macromolecular complex;1.66854576792506e-68!GO:0044237;cellular metabolic process;1.70859099950365e-66!GO:0044238;primary metabolic process;4.9165996090828e-66!GO:0005739;mitochondrion;7.80049052500753e-64!GO:0030529;ribonucleoprotein complex;3.46555752820698e-62!GO:0043170;macromolecule metabolic process;2.69498280836225e-57!GO:0043233;organelle lumen;7.80542897868352e-52!GO:0031974;membrane-enclosed lumen;7.80542897868352e-52!GO:0005634;nucleus;5.43895755827191e-50!GO:0044428;nuclear part;6.8753194749237e-48!GO:0031090;organelle membrane;2.0446304241352e-45!GO:0005840;ribosome;9.72399559352212e-45!GO:0003723;RNA binding;8.28443992919395e-44!GO:0016043;cellular component organization and biogenesis;8.28443992919395e-44!GO:0044429;mitochondrial part;2.21517011791156e-41!GO:0009058;biosynthetic process;2.99678698405122e-41!GO:0019538;protein metabolic process;5.13044493400765e-41!GO:0006412;translation;4.12146467690478e-40!GO:0003735;structural constituent of ribosome;7.68805970191578e-40!GO:0044249;cellular biosynthetic process;3.59772627642386e-38!GO:0044260;cellular macromolecule metabolic process;5.32819783114994e-37!GO:0044267;cellular protein metabolic process;1.07585715219807e-36!GO:0031967;organelle envelope;4.36553658547295e-36!GO:0031975;envelope;1.01084870306235e-35!GO:0006996;organelle organization and biogenesis;5.60385437963103e-35!GO:0043234;protein complex;1.6786899540992e-34!GO:0033279;ribosomal subunit;2.91308869586969e-34!GO:0043228;non-membrane-bound organelle;2.36191904301419e-33!GO:0043232;intracellular non-membrane-bound organelle;2.36191904301419e-33!GO:0009059;macromolecule biosynthetic process;2.99713957419179e-33!GO:0043283;biopolymer metabolic process;3.24041502572665e-31!GO:0006396;RNA processing;1.42854605218607e-30!GO:0005829;cytosol;2.77644628198034e-30!GO:0015031;protein transport;2.77644628198034e-30!GO:0033036;macromolecule localization;3.04663126966928e-30!GO:0031981;nuclear lumen;6.40362805331113e-29!GO:0005740;mitochondrial envelope;9.20373152050807e-29!GO:0008104;protein localization;1.5846992250472e-28!GO:0045184;establishment of protein localization;1.17045908427342e-27!GO:0046907;intracellular transport;7.97296924653537e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.61131912890419e-26!GO:0031966;mitochondrial membrane;1.64303485186343e-26!GO:0019866;organelle inner membrane;2.25257523733615e-26!GO:0005743;mitochondrial inner membrane;6.12282870493774e-25!GO:0006259;DNA metabolic process;1.85772668938237e-24!GO:0065003;macromolecular complex assembly;5.37951740881262e-24!GO:0016071;mRNA metabolic process;7.06917238442009e-24!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.41168784590202e-23!GO:0010467;gene expression;1.55267403361059e-23!GO:0007049;cell cycle;1.6358743383366e-22!GO:0022607;cellular component assembly;6.78316381668636e-22!GO:0006886;intracellular protein transport;2.75591819599608e-21!GO:0008380;RNA splicing;6.4504565293929e-21!GO:0044445;cytosolic part;9.81441168822391e-21!GO:0006397;mRNA processing;2.22597593875293e-20!GO:0022402;cell cycle process;4.36144636700527e-18!GO:0000166;nucleotide binding;4.38914113862089e-18!GO:0015934;large ribosomal subunit;6.58521255053558e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.20456282147337e-17!GO:0015935;small ribosomal subunit;2.28420087066468e-17!GO:0012505;endomembrane system;2.88091870848393e-17!GO:0051641;cellular localization;4.86517521676316e-17!GO:0051649;establishment of cellular localization;6.31316857862457e-17!GO:0005654;nucleoplasm;6.54932838817943e-17!GO:0000278;mitotic cell cycle;3.22689736275424e-16!GO:0031980;mitochondrial lumen;4.15319018142263e-16!GO:0005759;mitochondrial matrix;4.15319018142263e-16!GO:0008134;transcription factor binding;4.26798168752624e-16!GO:0006119;oxidative phosphorylation;5.67933339621282e-16!GO:0005783;endoplasmic reticulum;1.42296565996915e-15!GO:0048770;pigment granule;1.87478496535735e-15!GO:0042470;melanosome;1.87478496535735e-15!GO:0005681;spliceosome;2.66685645705001e-15!GO:0044455;mitochondrial membrane part;3.61424515490347e-15!GO:0043412;biopolymer modification;5.65340821775805e-15!GO:0016462;pyrophosphatase activity;7.5578732046656e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.13663456522743e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.23015508371303e-14!GO:0016874;ligase activity;2.16631139135755e-14!GO:0017111;nucleoside-triphosphatase activity;4.17934054779526e-14!GO:0051186;cofactor metabolic process;4.30021852363941e-14!GO:0005794;Golgi apparatus;6.18551021254819e-14!GO:0032553;ribonucleotide binding;8.08642442613663e-14!GO:0032555;purine ribonucleotide binding;8.08642442613663e-14!GO:0044451;nucleoplasm part;1.07171842666955e-13!GO:0006464;protein modification process;1.07171842666955e-13!GO:0006457;protein folding;1.46144300979357e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.69954452002003e-13!GO:0044432;endoplasmic reticulum part;1.90394503157453e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.19529457583713e-13!GO:0051276;chromosome organization and biogenesis;3.16712942011882e-13!GO:0017076;purine nucleotide binding;3.33692934734932e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;5.23579726134337e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.35265424729167e-12!GO:0006512;ubiquitin cycle;1.39765724983635e-12!GO:0005746;mitochondrial respiratory chain;1.41031036493076e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.59432901435556e-12!GO:0003954;NADH dehydrogenase activity;1.59432901435556e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.59432901435556e-12!GO:0022403;cell cycle phase;1.66744481582811e-12!GO:0005730;nucleolus;2.2413578981387e-12!GO:0006605;protein targeting;4.32893632162176e-12!GO:0006323;DNA packaging;4.35643083421582e-12!GO:0012501;programmed cell death;4.9089085979593e-12!GO:0005524;ATP binding;5.08264891807445e-12!GO:0032559;adenyl ribonucleotide binding;5.86196928099627e-12!GO:0006915;apoptosis;1.10019985157787e-11!GO:0044265;cellular macromolecule catabolic process;1.86896450138669e-11!GO:0043687;post-translational protein modification;2.66223516833135e-11!GO:0005694;chromosome;2.74830420709839e-11!GO:0030554;adenyl nucleotide binding;3.24658049169579e-11!GO:0006732;coenzyme metabolic process;4.15312261507566e-11!GO:0044427;chromosomal part;4.83873662800799e-11!GO:0005761;mitochondrial ribosome;5.41148404582811e-11!GO:0000313;organellar ribosome;5.41148404582811e-11!GO:0007067;mitosis;6.1050138729165e-11!GO:0008219;cell death;9.35455914726462e-11!GO:0016265;death;9.35455914726462e-11!GO:0000087;M phase of mitotic cell cycle;1.03585869474991e-10!GO:0051726;regulation of cell cycle;1.10240929064205e-10!GO:0000074;regulation of progression through cell cycle;1.82579398193212e-10!GO:0000785;chromatin;2.64070770088883e-10!GO:0006974;response to DNA damage stimulus;2.74278057367938e-10!GO:0042775;organelle ATP synthesis coupled electron transport;2.86570478026199e-10!GO:0042773;ATP synthesis coupled electron transport;2.86570478026199e-10!GO:0030964;NADH dehydrogenase complex (quinone);3.02431152249564e-10!GO:0045271;respiratory chain complex I;3.02431152249564e-10!GO:0005747;mitochondrial respiratory chain complex I;3.02431152249564e-10!GO:0016740;transferase activity;3.18863399190411e-10!GO:0044248;cellular catabolic process;3.28786265479102e-10!GO:0022618;protein-RNA complex assembly;5.46840814274964e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.22066235542063e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.62211904556784e-10!GO:0003712;transcription cofactor activity;6.77810129070853e-10!GO:0005789;endoplasmic reticulum membrane;6.85187255568511e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.97366658398444e-10!GO:0009057;macromolecule catabolic process;9.61132982496771e-10!GO:0043285;biopolymer catabolic process;1.21434840788785e-09!GO:0006333;chromatin assembly or disassembly;1.95800431960472e-09!GO:0051082;unfolded protein binding;2.06234122766538e-09!GO:0000502;proteasome complex (sensu Eukaryota);2.14472171236529e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;2.19232795577765e-09!GO:0048523;negative regulation of cellular process;2.20510310917671e-09!GO:0043067;regulation of programmed cell death;2.27114843840967e-09!GO:0019941;modification-dependent protein catabolic process;2.71835546333336e-09!GO:0043632;modification-dependent macromolecule catabolic process;2.71835546333336e-09!GO:0042981;regulation of apoptosis;2.79021290628333e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.17341732409173e-09!GO:0000375;RNA splicing, via transesterification reactions;3.17341732409173e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.17341732409173e-09!GO:0009055;electron carrier activity;4.22452372801417e-09!GO:0006511;ubiquitin-dependent protein catabolic process;4.28007179781217e-09!GO:0065004;protein-DNA complex assembly;4.63558063470076e-09!GO:0003676;nucleic acid binding;4.82431786904077e-09!GO:0044257;cellular protein catabolic process;4.82431786904077e-09!GO:0000279;M phase;5.68255686822541e-09!GO:0048193;Golgi vesicle transport;7.09858596181837e-09!GO:0051301;cell division;9.49494783665233e-09!GO:0005635;nuclear envelope;1.1141371556071e-08!GO:0006260;DNA replication;1.42729805949147e-08!GO:0006334;nucleosome assembly;1.47983280706582e-08!GO:0031497;chromatin assembly;1.47983280706582e-08!GO:0015630;microtubule cytoskeleton;2.08442097267463e-08!GO:0006913;nucleocytoplasmic transport;2.15348647010926e-08!GO:0048519;negative regulation of biological process;2.15356781342891e-08!GO:0051188;cofactor biosynthetic process;2.25756834405181e-08!GO:0009719;response to endogenous stimulus;2.56087170186919e-08!GO:0008135;translation factor activity, nucleic acid binding;3.0085247557763e-08!GO:0031965;nuclear membrane;3.9284339433218e-08!GO:0051169;nuclear transport;4.20108317144281e-08!GO:0006163;purine nucleotide metabolic process;4.28634000257968e-08!GO:0006399;tRNA metabolic process;4.46499052779257e-08!GO:0006281;DNA repair;4.64239674184758e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.42036328989438e-08!GO:0009259;ribonucleotide metabolic process;6.75564461075703e-08!GO:0007005;mitochondrion organization and biogenesis;6.77694984402371e-08!GO:0042254;ribosome biogenesis and assembly;7.51237858329562e-08!GO:0030163;protein catabolic process;7.53676748925887e-08!GO:0005793;ER-Golgi intermediate compartment;8.13998715255672e-08!GO:0009150;purine ribonucleotide metabolic process;8.26578633386303e-08!GO:0030532;small nuclear ribonucleoprotein complex;8.6718633875024e-08!GO:0016192;vesicle-mediated transport;8.95437091415551e-08!GO:0042623;ATPase activity, coupled;1.19990714044536e-07!GO:0016070;RNA metabolic process;1.25504845750967e-07!GO:0017038;protein import;1.33673272030602e-07!GO:0006164;purine nucleotide biosynthetic process;1.50009113458266e-07!GO:0016563;transcription activator activity;2.1831443430943e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.87525032851696e-07!GO:0044453;nuclear membrane part;2.90700614274977e-07!GO:0009260;ribonucleotide biosynthetic process;3.54712672353266e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.96333166202002e-07!GO:0008639;small protein conjugating enzyme activity;4.10139249994128e-07!GO:0016568;chromatin modification;4.70767409906354e-07!GO:0006461;protein complex assembly;4.74733496757267e-07!GO:0005768;endosome;4.87338617792006e-07!GO:0016887;ATPase activity;7.12966004918836e-07!GO:0004842;ubiquitin-protein ligase activity;7.98176479678445e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.58182527002973e-07!GO:0006366;transcription from RNA polymerase II promoter;1.01751680655404e-06!GO:0006793;phosphorus metabolic process;1.03934463736612e-06!GO:0006796;phosphate metabolic process;1.03934463736612e-06!GO:0050794;regulation of cellular process;1.04040508148127e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.09937604194763e-06!GO:0065002;intracellular protein transport across a membrane;1.28584080958269e-06!GO:0043069;negative regulation of programmed cell death;1.28669831404252e-06!GO:0019787;small conjugating protein ligase activity;1.6104814896715e-06!GO:0045786;negative regulation of progression through cell cycle;1.6104814896715e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.6104814896715e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.6104814896715e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.6104814896715e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.78803527608817e-06!GO:0044431;Golgi apparatus part;1.80605293439284e-06!GO:0009141;nucleoside triphosphate metabolic process;2.00475929925406e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.10338683130164e-06!GO:0007010;cytoskeleton organization and biogenesis;2.12170024486215e-06!GO:0016604;nuclear body;2.87091608774476e-06!GO:0043066;negative regulation of apoptosis;2.89966421083e-06!GO:0051329;interphase of mitotic cell cycle;2.90536181855757e-06!GO:0006446;regulation of translational initiation;2.9102995941016e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.20578718995884e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.20578718995884e-06!GO:0009108;coenzyme biosynthetic process;3.23605396806894e-06!GO:0030036;actin cytoskeleton organization and biogenesis;4.14898275597547e-06!GO:0009117;nucleotide metabolic process;4.20769799541005e-06!GO:0051325;interphase;4.24678703491476e-06!GO:0043038;amino acid activation;4.24678703491476e-06!GO:0006418;tRNA aminoacylation for protein translation;4.24678703491476e-06!GO:0043039;tRNA aminoacylation;4.24678703491476e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.13590596261314e-06!GO:0016023;cytoplasmic membrane-bound vesicle;5.32807868166105e-06!GO:0003714;transcription corepressor activity;5.99460779076332e-06!GO:0006916;anti-apoptosis;6.20914728068409e-06!GO:0016881;acid-amino acid ligase activity;6.56291922074678e-06!GO:0008654;phospholipid biosynthetic process;7.17918084754786e-06!GO:0009142;nucleoside triphosphate biosynthetic process;7.30312957525725e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.30312957525725e-06!GO:0006413;translational initiation;7.5055852381344e-06!GO:0003743;translation initiation factor activity;8.92019175936575e-06!GO:0008565;protein transporter activity;9.18253107348863e-06!GO:0031988;membrane-bound vesicle;9.20361432927527e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.48957889537739e-06!GO:0005643;nuclear pore;9.74108592951226e-06!GO:0016310;phosphorylation;1.02396939309253e-05!GO:0009056;catabolic process;1.09518048965243e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.32791116847329e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.32791116847329e-05!GO:0031252;leading edge;1.32791116847329e-05!GO:0015986;ATP synthesis coupled proton transport;1.33961339955831e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.33961339955831e-05!GO:0006364;rRNA processing;1.33990876844781e-05!GO:0003924;GTPase activity;1.45630246535638e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.50236840246537e-05!GO:0000786;nucleosome;1.86482101725799e-05!GO:0048522;positive regulation of cellular process;2.42169736586091e-05!GO:0016564;transcription repressor activity;2.43521054993341e-05!GO:0030029;actin filament-based process;2.46244799790665e-05!GO:0045259;proton-transporting ATP synthase complex;2.72460259453785e-05!GO:0019829;cation-transporting ATPase activity;2.74327378657876e-05!GO:0001558;regulation of cell growth;2.84393798505821e-05!GO:0051246;regulation of protein metabolic process;2.85313301774557e-05!GO:0030120;vesicle coat;2.89811506726131e-05!GO:0030662;coated vesicle membrane;2.89811506726131e-05!GO:0016072;rRNA metabolic process;2.90379093426269e-05!GO:0016491;oxidoreductase activity;2.90379093426269e-05!GO:0046034;ATP metabolic process;2.91892615705172e-05!GO:0005813;centrosome;3.05927801314265e-05!GO:0005762;mitochondrial large ribosomal subunit;3.28476359462674e-05!GO:0000315;organellar large ribosomal subunit;3.28476359462674e-05!GO:0042802;identical protein binding;3.31657090915011e-05!GO:0009060;aerobic respiration;3.33254757901204e-05!GO:0007264;small GTPase mediated signal transduction;3.50815740570294e-05!GO:0044440;endosomal part;3.82683055153545e-05!GO:0010008;endosome membrane;3.82683055153545e-05!GO:0005788;endoplasmic reticulum lumen;3.87432681890595e-05!GO:0008610;lipid biosynthetic process;3.95585764951036e-05!GO:0005815;microtubule organizing center;4.10506890906457e-05!GO:0005667;transcription factor complex;4.15463876195926e-05!GO:0016787;hydrolase activity;4.20785734502704e-05!GO:0032446;protein modification by small protein conjugation;4.7240909376758e-05!GO:0016779;nucleotidyltransferase activity;4.99846807148867e-05!GO:0016567;protein ubiquitination;5.63648826302151e-05!GO:0048475;coated membrane;5.63949155013094e-05!GO:0030117;membrane coat;5.63949155013094e-05!GO:0031410;cytoplasmic vesicle;5.72533747938587e-05!GO:0051170;nuclear import;5.88693432090762e-05!GO:0008361;regulation of cell size;6.98383607838809e-05!GO:0046930;pore complex;6.99873040738732e-05!GO:0031982;vesicle;7.05455617863905e-05!GO:0019899;enzyme binding;7.20498451266917e-05!GO:0005905;coated pit;7.23449558172091e-05!GO:0016049;cell growth;7.38370036793467e-05!GO:0000139;Golgi membrane;7.38370036793467e-05!GO:0004386;helicase activity;7.9962186354541e-05!GO:0031324;negative regulation of cellular metabolic process;8.07126107216001e-05!GO:0006606;protein import into nucleus;8.07126107216001e-05!GO:0051427;hormone receptor binding;8.57431823490662e-05!GO:0015078;hydrogen ion transmembrane transporter activity;9.2642854312571e-05!GO:0048468;cell development;9.70461676884876e-05!GO:0050789;regulation of biological process;0.000102870149613169!GO:0065009;regulation of a molecular function;0.000109331898856257!GO:0006754;ATP biosynthetic process;0.000110912257848992!GO:0006753;nucleoside phosphate metabolic process;0.000110912257848992!GO:0009892;negative regulation of metabolic process;0.000121657600210931!GO:0045333;cellular respiration;0.000123222153989279!GO:0005839;proteasome core complex (sensu Eukaryota);0.000125609352123092!GO:0003713;transcription coactivator activity;0.000127433873236572!GO:0035257;nuclear hormone receptor binding;0.00014803108621775!GO:0016469;proton-transporting two-sector ATPase complex;0.000154808848188258!GO:0005874;microtubule;0.000170924282825976!GO:0006888;ER to Golgi vesicle-mediated transport;0.000174099672393742!GO:0016607;nuclear speck;0.000174099672393742!GO:0006752;group transfer coenzyme metabolic process;0.0001828390878611!GO:0008092;cytoskeletal protein binding;0.00018727875755095!GO:0005773;vacuole;0.000225033391866023!GO:0019843;rRNA binding;0.000225033391866023!GO:0016853;isomerase activity;0.000227941214294865!GO:0005770;late endosome;0.000240357050970841!GO:0003899;DNA-directed RNA polymerase activity;0.000283265840355436!GO:0040008;regulation of growth;0.000286561931093368!GO:0016126;sterol biosynthetic process;0.000316556762924402!GO:0006403;RNA localization;0.000328864947127975!GO:0050657;nucleic acid transport;0.000328864947127975!GO:0051236;establishment of RNA localization;0.000328864947127975!GO:0050658;RNA transport;0.000328864947127975!GO:0008026;ATP-dependent helicase activity;0.000362437725893974!GO:0044262;cellular carbohydrate metabolic process;0.000363974827111907!GO:0046474;glycerophospholipid biosynthetic process;0.000363974827111907!GO:0006099;tricarboxylic acid cycle;0.000367735734554478!GO:0046356;acetyl-CoA catabolic process;0.000367735734554478!GO:0008637;apoptotic mitochondrial changes;0.000376088057273865!GO:0016301;kinase activity;0.00041095736753774!GO:0006084;acetyl-CoA metabolic process;0.000412191256416711!GO:0007243;protein kinase cascade;0.000416047422335353!GO:0043623;cellular protein complex assembly;0.000435017531708768!GO:0004674;protein serine/threonine kinase activity;0.000443909989999199!GO:0045454;cell redox homeostasis;0.000465354178732266!GO:0003697;single-stranded DNA binding;0.000487043683737196!GO:0030867;rough endoplasmic reticulum membrane;0.000534204426358236!GO:0030176;integral to endoplasmic reticulum membrane;0.000565334692799147!GO:0005819;spindle;0.000581089080135773!GO:0000245;spliceosome assembly;0.000590629627178496!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000592206922854569!GO:0008632;apoptotic program;0.000682035750112394!GO:0005525;GTP binding;0.000718335749654625!GO:0046467;membrane lipid biosynthetic process;0.000721517538097137!GO:0006695;cholesterol biosynthetic process;0.000740565407192447!GO:0000151;ubiquitin ligase complex;0.000756617753420107!GO:0043065;positive regulation of apoptosis;0.000759023907453923!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000782663336133024!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000864572330369509!GO:0004298;threonine endopeptidase activity;0.000867496324861643!GO:0043068;positive regulation of programmed cell death;0.000955961598961606!GO:0006082;organic acid metabolic process;0.00102690596175008!GO:0033116;ER-Golgi intermediate compartment membrane;0.00102690596175008!GO:0051187;cofactor catabolic process;0.00104187309342913!GO:0005769;early endosome;0.00107596196576712!GO:0048518;positive regulation of biological process;0.00108321846667621!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00120822110568129!GO:0007265;Ras protein signal transduction;0.0012790369446523!GO:0019752;carboxylic acid metabolic process;0.0013285242171908!GO:0030133;transport vesicle;0.00138897541021951!GO:0016481;negative regulation of transcription;0.0014084610214811!GO:0009165;nucleotide biosynthetic process;0.00150304196040572!GO:0000323;lytic vacuole;0.00157551684415697!GO:0005764;lysosome;0.00157551684415697!GO:0008629;induction of apoptosis by intracellular signals;0.00161326203146919!GO:0045941;positive regulation of transcription;0.00162830351927753!GO:0006261;DNA-dependent DNA replication;0.00166210038909615!GO:0043566;structure-specific DNA binding;0.00172312631028636!GO:0016859;cis-trans isomerase activity;0.00172525633730243!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00172542898664789!GO:0009109;coenzyme catabolic process;0.00181662149172399!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00185480727302663!GO:0008250;oligosaccharyl transferase complex;0.00192046211905726!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0019389034800599!GO:0005798;Golgi-associated vesicle;0.00194075977824751!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00194478459559822!GO:0015399;primary active transmembrane transporter activity;0.00194478459559822!GO:0033673;negative regulation of kinase activity;0.00201467469368348!GO:0006469;negative regulation of protein kinase activity;0.00201467469368348!GO:0030132;clathrin coat of coated pit;0.00220875673968985!GO:0051920;peroxiredoxin activity;0.00225907004105976!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00229327492390504!GO:0007006;mitochondrial membrane organization and biogenesis;0.00233885027785866!GO:0051348;negative regulation of transferase activity;0.00246677339403672!GO:0001726;ruffle;0.00246677339403672!GO:0030118;clathrin coat;0.00254516287502518!GO:0048471;perinuclear region of cytoplasm;0.00257687084166351!GO:0045792;negative regulation of cell size;0.00266883962378283!GO:0045893;positive regulation of transcription, DNA-dependent;0.00277916809131112!GO:0005774;vacuolar membrane;0.00294264869977851!GO:0001836;release of cytochrome c from mitochondria;0.00296773462762209!GO:0000314;organellar small ribosomal subunit;0.00298728644248991!GO:0005763;mitochondrial small ribosomal subunit;0.00298728644248991!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00303959040017297!GO:0006595;polyamine metabolic process;0.0031129931341401!GO:0030308;negative regulation of cell growth;0.00312708954098314!GO:0006839;mitochondrial transport;0.00318983436397038!GO:0032561;guanyl ribonucleotide binding;0.00333149927676277!GO:0019001;guanyl nucleotide binding;0.00333149927676277!GO:0046489;phosphoinositide biosynthetic process;0.00340142059290414!GO:0006414;translational elongation;0.00359650395532851!GO:0006091;generation of precursor metabolites and energy;0.00362841115319192!GO:0008033;tRNA processing;0.00376147967015981!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00381005432804399!GO:0043681;protein import into mitochondrion;0.00388252348280662!GO:0051028;mRNA transport;0.00410287941037752!GO:0006520;amino acid metabolic process;0.00416239492472496!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0042712251273787!GO:0031968;organelle outer membrane;0.00441268728125507!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00443675099777128!GO:0006979;response to oxidative stress;0.00445008682953073!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00457030828070246!GO:0005791;rough endoplasmic reticulum;0.00467844281868025!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00475651709098618!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00502677581202413!GO:0043488;regulation of mRNA stability;0.00502677581202413!GO:0043487;regulation of RNA stability;0.00502677581202413!GO:0005048;signal sequence binding;0.00536475770476057!GO:0017166;vinculin binding;0.00551922376925744!GO:0005885;Arp2/3 protein complex;0.0055930785422106!GO:0030119;AP-type membrane coat adaptor complex;0.00566455014303163!GO:0006402;mRNA catabolic process;0.00575301267334055!GO:0005684;U2-dependent spliceosome;0.0058003995573216!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0058003995573216!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0058003995573216!GO:0019867;outer membrane;0.00587013554821274!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00609963126676501!GO:0031902;late endosome membrane;0.00620977684385566!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00625188147421562!GO:0030131;clathrin adaptor complex;0.00635214781150778!GO:0005996;monosaccharide metabolic process;0.00668140298374236!GO:0030658;transport vesicle membrane;0.00669508931662577!GO:0040029;regulation of gene expression, epigenetic;0.00669641401835941!GO:0051789;response to protein stimulus;0.0067905782428379!GO:0006986;response to unfolded protein;0.0067905782428379!GO:0030027;lamellipodium;0.00687856441352329!GO:0006778;porphyrin metabolic process;0.00695434090606006!GO:0033013;tetrapyrrole metabolic process;0.00695434090606006!GO:0006650;glycerophospholipid metabolic process;0.00699545651628229!GO:0051101;regulation of DNA binding;0.00701332715767801!GO:0005741;mitochondrial outer membrane;0.00718567185769543!GO:0003682;chromatin binding;0.00736421953011406!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00759318848594092!GO:0044437;vacuolar part;0.00762868411836223!GO:0030880;RNA polymerase complex;0.00776519895788472!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00779275007834015!GO:0035258;steroid hormone receptor binding;0.00785981558880777!GO:0018196;peptidyl-asparagine modification;0.00792091740390264!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00792091740390264!GO:0006740;NADPH regeneration;0.00804827272650081!GO:0006098;pentose-phosphate shunt;0.00804827272650081!GO:0043492;ATPase activity, coupled to movement of substances;0.00811280503407866!GO:0008094;DNA-dependent ATPase activity;0.00816870974816723!GO:0043284;biopolymer biosynthetic process;0.00816870974816723!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0081782417736092!GO:0007088;regulation of mitosis;0.00825498068152964!GO:0019318;hexose metabolic process;0.00836112570928128!GO:0016044;membrane organization and biogenesis;0.00836112570928128!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00843634645475241!GO:0005765;lysosomal membrane;0.00870556655563732!GO:0015980;energy derivation by oxidation of organic compounds;0.00881839444476066!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00895175929249236!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00895175929249236!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00895175929249236!GO:0008047;enzyme activator activity;0.00910435756480751!GO:0006066;alcohol metabolic process;0.00943157721844444!GO:0006626;protein targeting to mitochondrion;0.00947305927869806!GO:0007242;intracellular signaling cascade;0.00957465951833432!GO:0007266;Rho protein signal transduction;0.00984504154993979!GO:0006613;cotranslational protein targeting to membrane;0.00995962182415839!GO:0007346;regulation of progression through mitotic cell cycle;0.00995962182415839!GO:0030031;cell projection biogenesis;0.0103003656789578!GO:0030125;clathrin vesicle coat;0.0110080927290846!GO:0030665;clathrin coated vesicle membrane;0.0110080927290846!GO:0043021;ribonucleoprotein binding;0.011390287514892!GO:0006779;porphyrin biosynthetic process;0.011390287514892!GO:0033014;tetrapyrrole biosynthetic process;0.011390287514892!GO:0050790;regulation of catalytic activity;0.0114729298045178!GO:0009967;positive regulation of signal transduction;0.0115536169505414!GO:0030659;cytoplasmic vesicle membrane;0.0116458474907487!GO:0006509;membrane protein ectodomain proteolysis;0.011676127924369!GO:0033619;membrane protein proteolysis;0.011676127924369!GO:0006749;glutathione metabolic process;0.0120846627638308!GO:0051098;regulation of binding;0.0120846627638308!GO:0051168;nuclear export;0.0121888113862152!GO:0006401;RNA catabolic process;0.0121888113862152!GO:0006917;induction of apoptosis;0.0127701609455549!GO:0000118;histone deacetylase complex;0.0129334920928482!GO:0007051;spindle organization and biogenesis;0.0132104807090327!GO:0001666;response to hypoxia;0.0133062885602737!GO:0000082;G1/S transition of mitotic cell cycle;0.0133699055997548!GO:0003678;DNA helicase activity;0.0136300682001756!GO:0051252;regulation of RNA metabolic process;0.0137462425024043!GO:0015992;proton transport;0.0148635895651516!GO:0005083;small GTPase regulator activity;0.0148980956706182!GO:0006268;DNA unwinding during replication;0.0149246562466048!GO:0004680;casein kinase activity;0.0149345693741879!GO:0031301;integral to organelle membrane;0.0158151751652316!GO:0032508;DNA duplex unwinding;0.0159530545798812!GO:0032392;DNA geometric change;0.0159530545798812!GO:0004576;oligosaccharyl transferase activity;0.016261771111699!GO:0016741;transferase activity, transferring one-carbon groups;0.0164844375832821!GO:0045926;negative regulation of growth;0.0165181026706312!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0165252551143376!GO:0000428;DNA-directed RNA polymerase complex;0.0165252551143376!GO:0048487;beta-tubulin binding;0.0165583625654893!GO:0030660;Golgi-associated vesicle membrane;0.0166447618987725!GO:0012502;induction of programmed cell death;0.0166610078374652!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0167393026668582!GO:0006818;hydrogen transport;0.0170032841499004!GO:0042168;heme metabolic process;0.0170754073177454!GO:0006643;membrane lipid metabolic process;0.0173334102593854!GO:0045892;negative regulation of transcription, DNA-dependent;0.0173504030355151!GO:0000902;cell morphogenesis;0.0173767293674077!GO:0032989;cellular structure morphogenesis;0.0173767293674077!GO:0003746;translation elongation factor activity;0.0180669650517087!GO:0000075;cell cycle checkpoint;0.0182764755565582!GO:0003684;damaged DNA binding;0.0183645503992573!GO:0006497;protein amino acid lipidation;0.0188231563704339!GO:0008283;cell proliferation;0.0189885160987735!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0191807835035514!GO:0043086;negative regulation of catalytic activity;0.0201644870331242!GO:0008168;methyltransferase activity;0.0209462849911857!GO:0046483;heterocycle metabolic process;0.0210446635096733!GO:0005856;cytoskeleton;0.021130459461399!GO:0016125;sterol metabolic process;0.0215337188861167!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0216299885748232!GO:0003779;actin binding;0.0217056082034153!GO:0006007;glucose catabolic process;0.0218151135079706!GO:0000049;tRNA binding;0.0221135466055472!GO:0005657;replication fork;0.0221135466055472!GO:0015631;tubulin binding;0.022216373399523!GO:0043154;negative regulation of caspase activity;0.0236665849814751!GO:0007017;microtubule-based process;0.0239317491483207!GO:0044433;cytoplasmic vesicle part;0.0239317491483207!GO:0003729;mRNA binding;0.0239734514584672!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0240085330601659!GO:0008286;insulin receptor signaling pathway;0.0246635925172779!GO:0006220;pyrimidine nucleotide metabolic process;0.0247129982569657!GO:0007040;lysosome organization and biogenesis;0.0251471786478298!GO:0003724;RNA helicase activity;0.0251471786478298!GO:0006611;protein export from nucleus;0.0252867343644974!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0253890320100743!GO:0006807;nitrogen compound metabolic process;0.0253890320100743!GO:0065007;biological regulation;0.0262003486270758!GO:0006506;GPI anchor biosynthetic process;0.0273286922748562!GO:0000096;sulfur amino acid metabolic process;0.0274231966346779!GO:0006783;heme biosynthetic process;0.0275275339533342!GO:0046822;regulation of nucleocytoplasmic transport;0.0286055437043614!GO:0007050;cell cycle arrest;0.0289112963255227!GO:0051287;NAD binding;0.0289630114836028!GO:0005637;nuclear inner membrane;0.0289630114836028!GO:0006644;phospholipid metabolic process;0.029217101641001!GO:0009966;regulation of signal transduction;0.0293809780574284!GO:0043414;biopolymer methylation;0.0293870719827763!GO:0042158;lipoprotein biosynthetic process;0.0295244473471428!GO:0006739;NADP metabolic process;0.0305049076553885!GO:0030145;manganese ion binding;0.0305049076553885!GO:0006519;amino acid and derivative metabolic process;0.0309922971582589!GO:0016791;phosphoric monoester hydrolase activity;0.0310721895367065!GO:0016311;dephosphorylation;0.031475856633486!GO:0008652;amino acid biosynthetic process;0.0315811807351254!GO:0051128;regulation of cellular component organization and biogenesis;0.0315811807351254!GO:0008538;proteasome activator activity;0.0318535755902293!GO:0006284;base-excision repair;0.0318535755902293!GO:0050662;coenzyme binding;0.0319107085694972!GO:0016363;nuclear matrix;0.031921236794636!GO:0033559;unsaturated fatty acid metabolic process;0.0320860894471959!GO:0006636;unsaturated fatty acid biosynthetic process;0.0320860894471959!GO:0031124;mRNA 3'-end processing;0.0321513562482308!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0323609053561789!GO:0005938;cell cortex;0.0323729671227792!GO:0045334;clathrin-coated endocytic vesicle;0.0323753050390773!GO:0006289;nucleotide-excision repair;0.0323903750842011!GO:0000084;S phase of mitotic cell cycle;0.0323903750842011!GO:0006733;oxidoreduction coenzyme metabolic process;0.0323903750842011!GO:0005862;muscle thin filament tropomyosin;0.0324744156350444!GO:0008139;nuclear localization sequence binding;0.0333793504505722!GO:0042393;histone binding;0.0334566868549248!GO:0030134;ER to Golgi transport vesicle;0.0334998130134407!GO:0051087;chaperone binding;0.0335876012384448!GO:0051338;regulation of transferase activity;0.0336887018191605!GO:0016569;covalent chromatin modification;0.0337824699369501!GO:0006950;response to stress;0.033832847859743!GO:0050178;phenylpyruvate tautomerase activity;0.0338861531614295!GO:0006505;GPI anchor metabolic process;0.0340530028514782!GO:0051059;NF-kappaB binding;0.0346253124809914!GO:0044452;nucleolar part;0.0347161480769994!GO:0016272;prefoldin complex;0.0352339737639064!GO:0045806;negative regulation of endocytosis;0.0352339737639064!GO:0006769;nicotinamide metabolic process;0.0352339737639064!GO:0046870;cadmium ion binding;0.0352339737639064!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0358763833432381!GO:0009262;deoxyribonucleotide metabolic process;0.0358879416433732!GO:0006612;protein targeting to membrane;0.0365866366166018!GO:0019206;nucleoside kinase activity;0.0367978793947052!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0368496269743542!GO:0006352;transcription initiation;0.0374999027995346!GO:0030521;androgen receptor signaling pathway;0.037827605087087!GO:0008186;RNA-dependent ATPase activity;0.0378743600672453!GO:0004177;aminopeptidase activity;0.0379487017184687!GO:0031072;heat shock protein binding;0.038364130323187!GO:0044255;cellular lipid metabolic process;0.039420674685627!GO:0006338;chromatin remodeling;0.039420674685627!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0399972976171018!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0399972976171018!GO:0009126;purine nucleoside monophosphate metabolic process;0.0399972976171018!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0399972976171018!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0399972976171018!GO:0015002;heme-copper terminal oxidase activity;0.0399972976171018!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0399972976171018!GO:0004129;cytochrome-c oxidase activity;0.0399972976171018!GO:0009308;amine metabolic process;0.0400430998708795!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0408988728108992!GO:0008022;protein C-terminus binding;0.0410613574700326!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0413884991545971!GO:0010257;NADH dehydrogenase complex assembly;0.0413884991545971!GO:0033108;mitochondrial respiratory chain complex assembly;0.0413884991545971!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0415196444122261!GO:0043433;negative regulation of transcription factor activity;0.0415196444122261!GO:0030433;ER-associated protein catabolic process;0.0424774784426416!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0424774784426416!GO:0000059;protein import into nucleus, docking;0.0425345517532124!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0427487153980876!GO:0046519;sphingoid metabolic process;0.0429231080651555!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.044516892500832!GO:0009124;nucleoside monophosphate biosynthetic process;0.044652482290853!GO:0009123;nucleoside monophosphate metabolic process;0.044652482290853!GO:0031529;ruffle organization and biogenesis;0.0448294005729746!GO:0003923;GPI-anchor transamidase activity;0.0449521126246317!GO:0016255;attachment of GPI anchor to protein;0.0449521126246317!GO:0042765;GPI-anchor transamidase complex;0.0449521126246317!GO:0051270;regulation of cell motility;0.0449521126246317!GO:0006383;transcription from RNA polymerase III promoter;0.0452385026419934!GO:0016584;nucleosome positioning;0.0453666039588958!GO:0016783;sulfurtransferase activity;0.0455675252162469!GO:0005881;cytoplasmic microtubule;0.0457737120975781!GO:0007033;vacuole organization and biogenesis;0.0465132295331695!GO:0051090;regulation of transcription factor activity;0.0476470038355167!GO:0007021;tubulin folding;0.0483543203704166!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0485417883155224
|sample_id=11517
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=kidney
|top_motifs=XCPE1{core}:3.20883137547;SP1:2.43651972267;POU2F1..3:2.06248300908;ZNF423:2.05292760357;GTF2A1,2:2.04828986018;TFAP2{A,C}:1.90547187919;PBX1:1.77330953045;TFCP2:1.75016051508;ZNF148:1.72843596027;EBF1:1.56496409751;RXRA_VDR{dimer}:1.53132326793;RXR{A,B,G}:1.5171972088;MYOD1:1.4530040849;HNF1A:1.39352027562;SPZ1:1.35955067121;TFAP2B:1.29740389569;SOX{8,9,10}:1.24631268928;bHLH_family:1.22962010167;NR6A1:1.16889495622;VSX1,2:1.1664968792;NKX2-3_NKX2-5:1.14463235183;ESRRA:1.13344508914;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.1261413532;HIC1:1.07371680454;ESR1:1.05490364;SNAI1..3:1.05412243598;ZEB1:1.0409641478;NFY{A,B,C}:1.02872953655;HOX{A5,B5}:1.0156865162;MTF1:0.928794150665;GLI1..3:0.905876176749;NR5A1,2:0.903716153436;RREB1:0.900335270983;PAX5:0.880722556662;TEAD1:0.820439548611;TP53:0.811222649437;IKZF1:0.790727237522;LEF1_TCF7_TCF7L1,2:0.780980529751;ZIC1..3:0.727371279308;NR3C1:0.718911354125;HAND1,2:0.696922806555;LMO2:0.670609206679;JUN:0.629212854922;LHX3,4:0.625342665245;TBX4,5:0.613357703131;GFI1:0.600246586085;ADNP_IRX_SIX_ZHX:0.523020225389;NR1H4:0.51381264143;SRF:0.508614463109;ZNF143:0.502892739331;ONECUT1,2:0.498610680419;PATZ1:0.480739790215;E2F1..5:0.469010528316;GZF1:0.465946346906;FOXQ1:0.461497837774;GTF2I:0.455413409483;PAX8:0.451249629442;TFDP1:0.421590745121;STAT5{A,B}:0.359000348913;PPARG:0.351575169296;TBP:0.350770113841;EP300:0.330880697361;FOSL2:0.324763602856;TLX1..3_NFIC{dimer}:0.306241502096;GFI1B:0.282472377544;BACH2:0.243575671149;FOS_FOS{B,L1}_JUN{B,D}:0.230480745502;SOX2:0.216249593286;HNF4A_NR2F1,2:0.205499966539;ZBTB6:0.203014100167;REST:0.191220927241;NFE2L1:0.162247719497;MAZ:0.128212665339;GCM1,2:0.115982222302;SOX17:0.0896624749803;POU5F1:0.0854724318582;NFE2:0.0836643163183;PRRX1,2:0.0785100693887;NFE2L2:0.0496296099173;HOXA9_MEIS1:0.048549030905;STAT2,4,6:0.0469873036422;MED-1{core}:0.0268785622024;ZFP161:-0.0140547147139;MEF2{A,B,C,D}:-0.018550554238;NFKB1_REL_RELA:-0.0228785386479;EGR1..3:-0.0335170152728;PAX1,9:-0.0392124727958;TAL1_TCF{3,4,12}:-0.0415642993113;POU3F1..4:-0.065433667411;ATF2:-0.0801049409318;TFAP4:-0.0930540970596;NANOG:-0.12325745877;POU1F1:-0.157161988153;HOX{A6,A7,B6,B7}:-0.182357068768;NRF1:-0.219760094802;AR:-0.223162566283;HLF:-0.229360020058;GATA6:-0.234890998284;OCT4_SOX2{dimer}:-0.256689680584;FOXM1:-0.263727488457;ETS1,2:-0.268709968523;BREu{core}:-0.271411333482;RFX1:-0.271806650951;RUNX1..3:-0.285909561673;CRX:-0.286737473432;NHLH1,2:-0.29085543755;ZNF238:-0.310000490069;KLF4:-0.315998669999;CDC5L:-0.331623067941;HES1:-0.334258583136;FOX{F1,F2,J1}:-0.346106860985;MZF1:-0.358903839379;TOPORS:-0.366860747572;DBP:-0.383025892755;MTE{core}:-0.386893255893;POU6F1:-0.388066425596;ARID5B:-0.413230201047;ELK1,4_GABP{A,B1}:-0.459482022169;CREB1:-0.513439964898;TEF:-0.523458404446;RORA:-0.523825632029;PAX6:-0.535172823785;MYB:-0.548349794259;CEBPA,B_DDIT3:-0.554059435529;SPIB:-0.565413489678;MYBL2:-0.572278483889;PDX1:-0.596318950681;NFIL3:-0.609033921975;SREBF1,2:-0.61538424634;XBP1:-0.625649906023;CUX2:-0.630348863849;UFEwm:-0.634065922899;PITX1..3:-0.638399172287;PAX2:-0.66529673715;STAT1,3:-0.73375636593;SOX5:-0.734857791722;FOX{I1,J2}:-0.738520158046;ATF6:-0.753725220808;ZNF384:-0.765256524488;SPI1:-0.766621437375;YY1:-0.770542076046;NFATC1..3:-0.778426773492;FOXL1:-0.805255886965;ATF4:-0.806939446113;HMX1:-0.818962516528;ALX4:-0.851867643488;FOXA2:-0.893002557575;EN1,2:-0.908909462646;NKX3-1:-0.921163651141;HSF1,2:-0.950595554493;PAX3,7:-0.958826798914;SMAD1..7,9:-0.976303172115;PRDM1:-0.98406093388;FOX{D1,D2}:-0.992771321353;NKX6-1,2:-1.02617975133;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.03223260916;MYFfamily:-1.04775986562;IRF7:-1.06339733891;NANOG{mouse}:-1.0739025746;ATF5_CREB3:-1.0903290566;ELF1,2,4:-1.10202776737;IRF1,2:-1.11300055197;HOX{A4,D4}:-1.12948161162;AHR_ARNT_ARNT2:-1.15505517099;CDX1,2,4:-1.15679685222;ALX1:-1.17496154697;NKX3-2:-1.22790265766;RFX2..5_RFXANK_RFXAP:-1.23118911315;T:-1.25028539091;HIF1A:-1.2645586993;DMAP1_NCOR{1,2}_SMARC:-1.29205349544;HBP1_HMGB_SSRP1_UBTF:-1.29856933218;FOXP3:-1.33832904495;NKX2-2,8:-1.3412732606;TGIF1:-1.41235865273;EVI1:-1.41579175985;AIRE:-1.44349805682;FOXP1:-1.46043745815;MAFB:-1.54702085441;RBPJ:-1.5757071438;NKX2-1,4:-1.60693858;NFIX:-1.62926319573;FOXN1:-1.6841607016;FOXD3:-1.70519504317;IKZF2:-1.73801763207;GATA4:-1.80561123954;TLX2:-1.81650169837;ZBTB16:-1.82760055463;BPTF:-1.88516579191;FOXO1,3,4:-1.92760028445;HMGA1,2:-2.00355545193;PAX4:-2.42299850182
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11517-119H5;search_select_hide=table117:FF:11517-119H5
}}
}}

Latest revision as of 18:05, 4 June 2020

Name:Renal Epithelial Cells, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11332
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuekidney
dev stageNA
sexNA
ageNA
cell typeepithelial cell of kidney
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberSC4125
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005877
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11332 CAGE DRX008427 DRR009299
Accession ID Hg19

Library idBAMCTSS
CNhs11332 DRZ000724 DRZ002109
Accession ID Hg38

Library idBAMCTSS
CNhs11332 DRZ012074 DRZ013459
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005877
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10011.CCGTCC sRNA-Seq DRX037176 DRR041542
Accession ID Hg19

Library idBAMCTSS
SRhi10011.CCGTCC DRZ007184


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0806
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0475
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0379
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.352
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0843
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.153
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.224
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.13
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.251
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.889
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.637
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11332

Jaspar motifP-value
MA0002.20.514
MA0003.10.41
MA0004.10.231
MA0006.10.137
MA0007.10.131
MA0009.11
MA0014.10.664
MA0017.10.396
MA0018.20.15
MA0019.10.0341
MA0024.10.0133
MA0025.10.0424
MA0027.10.443
MA0028.10.494
MA0029.10.441
MA0030.10.868
MA0031.10.268
MA0035.20.134
MA0038.14.41426e-4
MA0039.20.0221
MA0040.10.597
MA0041.10.181
MA0042.10.599
MA0043.10.931
MA0046.11.68027e-14
MA0047.20.506
MA0048.10.69
MA0050.10.0012
MA0051.10.0925
MA0052.10.0877
MA0055.10.00357
MA0057.10.492
MA0058.10.281
MA0059.10.869
MA0060.15.80189e-14
MA0061.10.623
MA0062.20.261
MA0065.20.825
MA0066.10.681
MA0067.10.13
MA0068.10.993
MA0069.10.654
MA0070.14.95692e-4
MA0071.10.682
MA0072.10.748
MA0073.10.948
MA0074.10.648
MA0076.10.215
MA0077.10.024
MA0078.10.715
MA0079.20.244
MA0080.26.50161e-4
MA0081.10.119
MA0083.10.00296
MA0084.10.306
MA0087.10.828
MA0088.10.962
MA0090.10.00582
MA0091.10.361
MA0092.10.38
MA0093.10.228
MA0099.20.0142
MA0100.10.249
MA0101.10.698
MA0102.20.0253
MA0103.10.00463
MA0104.20.518
MA0105.10.0744
MA0106.10.158
MA0107.10.563
MA0108.24.20113e-10
MA0111.10.0598
MA0112.20.761
MA0113.10.676
MA0114.10.883
MA0115.10.689
MA0116.10.131
MA0117.10.4
MA0119.10.0948
MA0122.10.942
MA0124.10.679
MA0125.10.332
MA0131.10.496
MA0135.10.123
MA0136.10.00479
MA0137.20.854
MA0138.20.887
MA0139.10.845
MA0140.10.724
MA0141.10.705
MA0142.10.63
MA0143.10.206
MA0144.10.731
MA0145.10.283
MA0146.10.0668
MA0147.10.495
MA0148.10.507
MA0149.10.575
MA0150.10.453
MA0152.10.0673
MA0153.11.81872e-7
MA0154.10.73
MA0155.10.158
MA0156.10.138
MA0157.10.16
MA0159.10.851
MA0160.10.731
MA0162.10.293
MA0163.10.127
MA0164.10.965
MA0258.10.395
MA0259.10.376



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11332

Novel motifP-value
10.0543
100.0073
1000.473
1010.0411
1020.478
1030.177
1040.489
1050.182
1060.864
1070.334
1080.731
1090.727
110.731
1100.833
1110.21
1120.212
1130.0737
1140.0105
1150.918
1160.697
1170.24
1180.859
1190.622
120.478
1200.744
1210.467
1220.212
1230.00227
1240.211
1250.195
1260.929
1270.238
1280.589
1290.263
130.897
1300.0398
1310.187
1320.147
1330.142
1340.78
1350.321
1360.153
1370.0643
1380.0362
1390.0122
140.566
1400.227
1410.076
1420.708
1430.404
1440.705
1450.768
1460.0987
1470.748
1480.0128
1490.686
150.189
1500.474
1510.749
1520.107
1530.0456
1540.109
1550.897
1560.504
1570.548
1580.255
1590.611
160.465
1600.383
1610.572
1620.461
1630.597
1640.129
1650.122
1660.76
1670.0482
1680.33
1690.445
170.918
180.326
190.731
20.51
200.977
210.337
220.378
230.593
240.917
250.343
260.541
270.69
280.243
290.312
30.0657
300.0528
310.61
320.341
330.279
340.408
350.0275
360.674
370.824
380.918
390.694
40.525
400.0357
410.409
420.234
430.184
440.507
450.309
460.396
470.551
480.986
490.111
50.143
500.317
510.871
520.714
530.149
540.957
550.0574
560.652
570.308
580.0767
590.237
60.228
600.631
610.766
620.0116
630.869
640.968
650.384
660.141
670.541
680.312
690.166
70.471
700.0798
710.0872
720.328
730.108
740.186
750.142
760.0637
770.406
780.489
790.207
80.844
800.495
810.025
820.0635
830.787
840.426
850.142
860.411
870.0986
880.81
890.847
90.734
900.00106
910.54
920.0408
930.633
940.0793
950.961
960.198
970.927
980.387
990.0221



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11332


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
1000497 (kidney cell)
0002518 (kidney epithelial cell)
1000449 (epithelial cell of nephron)
1000507 (kidney tubule cell)
1000494 (nephron tubule epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002113 (kidney)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0006555 (excretory tube)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003103 (compound organ)
0009569 (subdivision of trunk)
0004211 (nephron epithelium)
0009773 (renal tubule)
0000489 (cavitated compound organ)
0005177 (trunk region element)
0005172 (abdomen element)
0001231 (nephron tubule)
0004819 (kidney epithelium)
0005173 (abdominal segment element)
0004810 (nephron tubule epithelium)
0001285 (nephron)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0007684 (uriniferous tubule)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000151 (human renal epithelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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