FF:11468-119C1: Difference between revisions

Latest revision as of 18:03, 4 June 2020

Name:	Preadipocyte - omental, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs11065
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	omentum
dev stage	58 years old adult
sex	female
age	58
cell type	preadipocyte
cell line	NA
company	Zenbio
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004851

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11065		CAGE		DRX008409		DRR009281

Accession ID Hg19

Library id		BAM		CTSS
CNhs11065		DRZ000706		DRZ002091

Accession ID Hg38

Library id		BAM		CTSS
CNhs11065		DRZ012056		DRZ013441

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

HumanCAGEScan Download raw sequence, BAM & CTSS

Library id		3prime-FASTQ		5prime-FASTQ		BAM		CTSS
NCig10051		download		download		download		download

RNA-Seq Accession numbers

Method		Sample accession id
sRNA-Seq		SAMD00004851

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
SRhi10006.CCGTCC		sRNA-Seq		DRX037081		DRR041447

Accession ID Hg19

Library id		BAM		CTSS
SRhi10006.CCGTCC		DRZ007089

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0935
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.407
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.662
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0551
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0642
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0524
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.333
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0799
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0705
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.18
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.18
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0.404
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.996
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0524
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.197
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.484
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.53
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.18
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0991
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.248
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.636
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	1.004
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.596
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	1.028
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0524
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.805
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11065

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.241
MA0003.1	MA0003.1	0.531
MA0004.1	MA0004.1	0.232
MA0006.1	MA0006.1	0.211
MA0007.1	MA0007.1	0.806
MA0009.1	MA0009.1	0.138
MA0014.1	MA0014.1	0.155
MA0017.1	MA0017.1	0.247
MA0018.2	MA0018.2	1.44911e-4
MA0019.1	MA0019.1	0.841
MA0024.1	MA0024.1	1.52337e-7
MA0025.1	MA0025.1	0.0262
MA0027.1	MA0027.1	0.387
MA0028.1	MA0028.1	0.0818
MA0029.1	MA0029.1	0.522
MA0030.1	MA0030.1	0.812
MA0031.1	MA0031.1	0.971
MA0035.2	MA0035.2	0.0842
MA0038.1	MA0038.1	0.00299
MA0039.2	MA0039.2	0.0059
MA0040.1	MA0040.1	0.239
MA0041.1	MA0041.1	0.578
MA0042.1	MA0042.1	0.704
MA0043.1	MA0043.1	0.00608
MA0046.1	MA0046.1	0.312
MA0047.2	MA0047.2	0.971
MA0048.1	MA0048.1	0.992
MA0050.1	MA0050.1	0.00522
MA0051.1	MA0051.1	0.392
MA0052.1	MA0052.1	0.391
MA0055.1	MA0055.1	0.372
MA0057.1	MA0057.1	0.688
MA0058.1	MA0058.1	0.169
MA0059.1	MA0059.1	0.399
MA0060.1	MA0060.1	8.34837e-13
MA0061.1	MA0061.1	5.88221e-5
MA0062.2	MA0062.2	4.84771e-6
MA0065.2	MA0065.2	0.126
MA0066.1	MA0066.1	0.645
MA0067.1	MA0067.1	0.0448
MA0068.1	MA0068.1	0.674
MA0069.1	MA0069.1	0.0826
MA0070.1	MA0070.1	0.523
MA0071.1	MA0071.1	0.951
MA0072.1	MA0072.1	0.398
MA0073.1	MA0073.1	0.958
MA0074.1	MA0074.1	0.891
MA0076.1	MA0076.1	0.0174
MA0077.1	MA0077.1	0.382
MA0078.1	MA0078.1	0.849
MA0079.2	MA0079.2	0.54
MA0080.2	MA0080.2	1.50554e-6
MA0081.1	MA0081.1	0.00555
MA0083.1	MA0083.1	0.206
MA0084.1	MA0084.1	0.475
MA0087.1	MA0087.1	0.451
MA0088.1	MA0088.1	0.299
MA0090.1	MA0090.1	8.79672e-8
MA0091.1	MA0091.1	0.0552
MA0092.1	MA0092.1	0.0443
MA0093.1	MA0093.1	0.277
MA0099.2	MA0099.2	3.99293e-4
MA0100.1	MA0100.1	0.541
MA0101.1	MA0101.1	3.0021e-7
MA0102.2	MA0102.2	0.351
MA0103.1	MA0103.1	5.07916e-4
MA0104.2	MA0104.2	0.00305
MA0105.1	MA0105.1	3.76727e-4
MA0106.1	MA0106.1	0.258
MA0107.1	MA0107.1	1.85714e-6
MA0108.2	MA0108.2	0.383
MA0111.1	MA0111.1	0.377
MA0112.2	MA0112.2	0.0956
MA0113.1	MA0113.1	0.161
MA0114.1	MA0114.1	0.183
MA0115.1	MA0115.1	0.00964
MA0116.1	MA0116.1	0.729
MA0117.1	MA0117.1	0.401
MA0119.1	MA0119.1	0.807
MA0122.1	MA0122.1	0.561
MA0124.1	MA0124.1	0.129
MA0125.1	MA0125.1	0.367
MA0131.1	MA0131.1	0.373
MA0135.1	MA0135.1	0.224
MA0136.1	MA0136.1	2.23597e-9
MA0137.2	MA0137.2	0.949
MA0138.2	MA0138.2	0.65
MA0139.1	MA0139.1	0.427
MA0140.1	MA0140.1	0.796
MA0141.1	MA0141.1	0.542
MA0142.1	MA0142.1	0.00849
MA0143.1	MA0143.1	0.845
MA0144.1	MA0144.1	0.671
MA0145.1	MA0145.1	0.265
MA0146.1	MA0146.1	0.524
MA0147.1	MA0147.1	0.0108
MA0148.1	MA0148.1	0.739
MA0149.1	MA0149.1	0.561
MA0150.1	MA0150.1	0.117
MA0152.1	MA0152.1	0.00641
MA0153.1	MA0153.1	0.494
MA0154.1	MA0154.1	0.636
MA0155.1	MA0155.1	0.362
MA0156.1	MA0156.1	1.7388e-6
MA0157.1	MA0157.1	0.744
MA0159.1	MA0159.1	0.306
MA0160.1	MA0160.1	0.0248
MA0162.1	MA0162.1	0.0831
MA0163.1	MA0163.1	0.647
MA0164.1	MA0164.1	0.531
MA0258.1	MA0258.1	0.868
MA0259.1	MA0259.1	0.309

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11065

Novel motif	Logo	P-value
1	1	0.459
10	10	0.723
100	100	0.606
101	101	0.411
102	102	0.0331
103	103	0.655
104	104	0.943
105	105	0.134
106	106	0.579
107	107	0.486
108	108	0.391
109	109	0.632
11	11	0.353
110	110	0.649
111	111	0.752
112	112	0.879
113	113	0.0124
114	114	0.152
115	115	0.122
116	116	0.222
117	117	0.395
118	118	0.146
119	119	0.212
12	12	0.428
120	120	0.689
121	121	0.704
122	122	0.299
123	123	0.00137
124	124	0.341
125	125	0.123
126	126	0.299
127	127	0.124
128	128	0.807
129	129	0.975
13	13	0.247
130	130	0.702
131	131	0.114
132	132	0.862
133	133	0.265
134	134	0.53
135	135	0.686
136	136	0.727
137	137	0.897
138	138	0.258
139	139	0.411
14	14	0.209
140	140	0.39
141	141	0.784
142	142	0.454
143	143	0.844
144	144	0.715
145	145	0.115
146	146	0.317
147	147	0.135
148	148	0.666
149	149	8.6522e-5
15	15	0.899
150	150	0.606
151	151	0.874
152	152	0.0206
153	153	0.0679
154	154	0.683
155	155	0.00568
156	156	0.306
157	157	0.839
158	158	0.0073
159	159	0.379
16	16	0.013
160	160	0.467
161	161	0.261
162	162	0.983
163	163	0.0442
164	164	0.61
165	165	0.919
166	166	0.0657
167	167	0.379
168	168	0.432
169	169	0.0908
17	17	0.866
18	18	0.158
19	19	0.0258
2	2	0.342
20	20	0.351
21	21	0.32
22	22	0.225
23	23	0.268
24	24	0.0535
25	25	0.284
26	26	0.397
27	27	0.668
28	28	0.217
29	29	0.487
3	3	0.854
30	30	0.378
31	31	0.762
32	32	8.40543e-16
33	33	0.927
34	34	0.939
35	35	0.726
36	36	0.0276
37	37	0.461
38	38	0.17
39	39	0.22
4	4	0.559
40	40	0.191
41	41	0.694
42	42	0.205
43	43	0.963
44	44	0.692
45	45	0.948
46	46	0.721
47	47	0.405
48	48	0.492
49	49	0.483
5	5	0.394
50	50	0.846
51	51	0.459
52	52	0.712
53	53	0.0765
54	54	0.89
55	55	0.224
56	56	0.402
57	57	0.674
58	58	0.279
59	59	0.373
6	6	0.444
60	60	0.983
61	61	0.346
62	62	0.504
63	63	0.989
64	64	0.213
65	65	0.827
66	66	0.239
67	67	0.546
68	68	0.899
69	69	0.423
7	7	0.201
70	70	0.464
71	71	0.978
72	72	0.948
73	73	0.0262
74	74	0.283
75	75	0.746
76	76	0.438
77	77	0.134
78	78	0.1
79	79	0.0235
8	8	0.815
80	80	0.511
81	81	0.675
82	82	0.395
83	83	0.996
84	84	0.275
85	85	0.0912
86	86	0.37
87	87	0.194
88	88	0.605
89	89	0.342
9	9	0.547
90	90	0.871
91	91	0.494
92	92	0.135
93	93	0.76
94	94	0.929
95	95	0.835
96	96	0.823
97	97	0.264
98	98	0.179
99	99	0.152

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11065

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000140 human omentum preadipocyte sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002579 (omentum preadipocyte)

UBERON: Anatomy
0000468 (multi-cellular organism)
0003688 (omentum)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0000042 (serous membrane)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002417 (abdominal segment of trunk)
0002358 (peritoneum)
0000916 (abdomen)
0003684 (abdominal cavity)
0001178 (visceral peritoneum)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000140 (human omentum preadipocyte sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:11468-119C1
+|DRA_sample_Accession=CAGE@SAMD00004851
-|name=Preadipocyte - omental, donor1
+|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004851
-|sample_id=11468
+|HumanCAGEScanFiles=NCig10051;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Preadipocyte%2520-%2520omental%252c%2520donor1.NCig10051.11468-119C1.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Preadipocyte%2520-%2520omental%252c%2520donor1.NCig10051.11468-119C1.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Preadipocyte%2520-%2520omental%252c%2520donor1.NCig10051.11468-119C1.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Preadipocyte%2520-%2520omental%252c%2520donor1.NCig10051.11468-119C1.hg19.GCTATA.pairs.bed.gz
-|rna_tube_id=119C1
+|accession_numbers=CAGE;DRX008409;DRR009281;DRZ000706;DRZ002091;DRZ012056;DRZ013441
-|rna_box=119
+|accession_numbers_RNASeq=sRNA-Seq;DRX037081;DRR041447;DRZ007089
-|rna_position=C1
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003688,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0004457,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004923,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0000042,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002417,UBERON:0002358,UBERON:0000916,UBERON:0003684,UBERON:0001178
-|sample_cell_lot=lot:OM042105B
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002579
-|sample_cell_catalog=F-OP-F
-|sample_company=Zenbio
-|rna_lot_number=
-|rna_catalog_number=N/A
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=58 years old adult
-|sample_tissue=omentum
-|sample_donor(cell lot)=
-|sample_sex=female
-|sample_age=58
-|sample_ethnicity=C
-|rna_rin=
-|rna_od260/230=1.90000
-|rna_od260/280=1.98000
-|sample_cell_type=preadipocyte
-|sample_cell_line=
-|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
-|rna_weight_ug=11.80000
-|rna_concentration=0.47000
-|sample_note=
-|profile_hcage=CNhs11065,LSID723,release008,COMPLETED
-|profile_cagescan=NCig10051,,,
-|profile_srnaseq=SRhi10006,,,
-|profile_rnaseq=,,,
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002334,CL:0002371,CL:0002579
-|ancestors_in_anatomy_facet=UBERON:0000042,UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001178,UBERON:0002050,UBERON:0002100,UBERON:0002323,UBERON:0002358,UBERON:0002384,UBERON:0002417,UBERON:0002532,UBERON:0002553,UBERON:0003684,UBERON:0003688,UBERON:0004120,UBERON:0004457,UBERON:0004458,UBERON:0004923,UBERON:0005423
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000137,FF:0000140
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
+|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.24!172.99!TCF21;;chr2:19558373..19558392,-!p1@OSR1!1.63!110.58!OSR1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.55!34.47!ZBED1;;chr8:72756637..72756664,-!p3@MSC!1.53!37.16!MSC;;chr9:96717629..96717644,-!p1@BARX1!1.48!29.47!BARX1;;chr14:62162285..62162296,+!p3@HIF1A!1.44!132.75!HIF1A;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.44!26.65!HOXC5;;chr14:62162258..62162269,+!p2@HIF1A!1.43!242.57!HIF1A;;chr19:47523058..47523114,+!p1@NPAS1!1.36!21.66!NPAS1;;chr18:53068911..53068935,-!p4@TCF4!1.33!23.19!TCF4;;chr1:170632285..170632309,+!p1@PRRX1!1.32!22.42!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.30!95.34!CREB3L1;;chr18:19749541..19749557,+!p1@GATA6!1.29!56.64!GATA6;;chr8:72756667..72756736,-!p2@MSC!1.29!28.45!MSC;;chr12:54402745..54402788,+!p1@HOXC8!1.27!17.81!HOXC8;;chr18:19749386..19749404,+!p2@GATA6!1.26!24.73!GATA6;;chr8:25902876..25902936,-!p1@EBF2!1.26!17.04!EBF2;;chr2:239756671..239756732,+!p1@TWIST2!1.21!48.31!TWIST2;;chr4:174450089..174450153,-!p2@HAND2!1.21!15.25!HAND2;;chr17:46682321..46682362,-!p1@HOXB6!1.21!15.25!HOXB6;;chr11:46299539..46299620,+!p2@CREB3L1!1.20!24.86!CREB3L1;;chr15:96874145..96874166,+!p7@NR2F2!1.18!26.91!NR2F2;;chr9:132427883..132427951,+!p2@PRRX2!1.17!13.84!PRRX2;;chr8:49833948..49833973,-!p2@SNAI2!1.15!82.65!SNAI2;;chr2:8822176..8822196,+!p1@ID2!1.14!1776.65!ID2;;chr8:72756267..72756296,-!p4@MSC!1.13!18.58!MSC;;chr2:239756739..239756755,+!p2@TWIST2!1.12!20.63!TWIST2;;chr1:23885981..23886002,-!p1@ID3!1.10!1993.20!ID3;;chr7:27183291..27183324,-!p1@HOXA5!1.10!11.53!HOXA5;;chr7:27183263..27183284,-!p2@HOXA5!1.07!10.76!HOXA5;;chr19:50432453..50432468,+!p1@ATF5!1.05!574.58!ATF5;;chr6:19837592..19837621,+!p1@ID4!1.04!62.28!ID4;;chr5:92918919..92918942,+!p1@NR2F1!1.03!43.95!NR2F1;;chr8:72756213..72756243,-!p5@MSC!1.03!12.69!MSC;;chr1:170633058..170633084,+!p5@PRRX1!1.02!9.48!PRRX1;;chr12:54393880..54393962,+!p1@HOXC9!1.02!9.35!HOXC9;;chr15:96869255..96869291,+!p6@NR2F2!1.01!17.17!NR2F2;;chr1:170632959..170632987,+!p4@PRRX1!1.01!10.12!PRRX1;;chr5:72744594..72744609,-!p1@FOXD1!1.00!41.77!FOXD1;;chr16:31076332..31076388,-!p3@ZNF668!1.00!8.97!ZNF668;;chrX:106960180..106960197,-!p2@TSC22D3!0.99!33.96!TSC22D3;;chr9:132427972..132428056,+!p1@PRRX2!0.98!11.15!PRRX2;;chr10:63809013..63809041,+!p3@ARID5B!0.97!47.28!ARID5B;;chr15:96874244..96874259,+!p5@NR2F2!0.97!20.50!NR2F2;;chr20:30193083..30193098,+!p1@ID1!0.96!669.27!ID1;;chr15:42749722..42749739,-!p2@ZFP106!0.96!14.99!ZFP106;;chr8:72756063..72756125,-!p1@MSC!0.95!16.53!MSC;;chr8:72756380..72756427,-!p8@MSC!0.95!7.94!MSC;;chr2:119605214..119605230,-!p1@EN1!0.95!7.94!EN1;;chr8:106330656..106330684,+!p1@ZFPM2!0.94!20.63!ZFPM2;;chr7:27192185..27192209,-!p1@HOXA3!0.94!7.69!HOXA3;;chr17:46688334..46688385,-!p1@HOXB7!0.92!10.76!HOXB7;;chr15:96873984..96873999,+!p3@NR2F2!0.91!54.59!NR2F2;;chr4:174451370..174451387,-!p1@HAND2!0.91!7.18!HAND2;;chr10:131762504..131762555,-!p1@EBF3!0.90!6.92!EBF3;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.90!6.92!HOXC5;;chr7:150946015..150946070,-!p3@SMARCD3!0.88!14.74!SMARCD3;;chr14:62203595..62203676,+!p4@HIF1A!0.88!12.69!HIF1A;;chr9:96717678..96717689,-!p2@BARX1!0.88!6.66!BARX1;;chr13:45151259..45151326,-!p2@TSC22D1!0.87!40.36!TSC22D1;;chr19:13134772..13134822,+!p2@NFIX!0.87!9.74!NFIX;;chr17:46687959..46688007,-!p2@HOXB7!0.87!8.97!HOXB7;;chr2:119604456..119604501,-!p2@EN1!0.86!6.28!EN1;;chr17:1959369..1959388,+!p2@HIC1!0.85!16.79!HIC1;;chr2:85981027..85981047,+!p8@ATOH8!0.85!6.15!ATOH8;;chr14:62164416..62164443,+!p27@HIF1A!0.85!6.02!HIF1A;;chr10:77161504..77161530,-!p1@ZNF503!0.84!84.32!ZNF503;;chr15:96874012..96874042,+!p2@NR2F2!0.84!56.38!NR2F2;;chr12:54394309..54394336,+!p2@HOXC9!0.84!5.89!HOXC9;;chr11:12696071..12696086,+!p3@TEAD1!0.83!7.82!TEAD1;;chr14:62162224..62162254,+!p1@HIF1A!0.82!874.93!HIF1A;;chr8:49833978..49833996,-!p1@SNAI2!0.82!125.45!SNAI2;;chr12:80085061..80085119,-!p6@PAWR!0.82!9.23!PAWR;;chr8:106330696..106330719,+!p2@ZFPM2!0.82!7.30!ZFPM2;;chr6:144329384..144329405,-!p1@PLAGL1!0.81!69.20!PLAGL1;;chr5:72744445..72744466,-!p2@FOXD1!0.81!9.48!FOXD1;;chr15:96876966..96877017,+!p12@NR2F2!0.81!8.07!NR2F2;;chr14:95236551..95236576,-!p2@GSC!0.81!5.51!GSC;;chr17:46132044..46132080,+!p4@NFE2L1!0.81!5.51!NFE2L1;;chr18:19749353..19749367,+!p4@GATA6!0.81!5.51!GATA6;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.80!58.18!GLIS2;;chr15:96869292..96869320,+!p15@NR2F2!0.80!7.94!NR2F2;;chr8:72755987..72756002,-!p7@MSC!0.80!5.38!MSC;;chr7:150945754..150945789,-!p2@SMARCD3!0.79!17.04!SMARCD3;;chr3:170076314..170076334,+!p2@SKIL!0.79!6.92!SKIL;;chr1:158979872..158979898,+!p3@IFI16!0.78!16.66!IFI16;;chr6:32095523..32095564,-!p2@ATF6B!0.78!7.05!ATF6B;;chr15:96874216..96874236,+!p13@NR2F2!0.77!7.94!NR2F2;;chr5:92919100..92919135,+!p3@NR2F1!0.77!6.02!NR2F1;;chr6:126102292..126102329,+!p3@NCOA7!0.76!17.04!NCOA7;;chr15:96869114..96869160,+!p11@NR2F2!0.76!6.66!NR2F2;;chr17:46675420..46675465,-!p3@HOXB6!0.76!5.64!HOXB6;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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 67: / Line 44: @@
 |fonse_treatment=
 |fonse_treatment_closure=
+|has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor1.CNhs11065.11468-119C1.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor1.CNhs11065.11468-119C1.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor1.CNhs11065.11468-119C1.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor1.CNhs11065.11468-119C1.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520omental%252c%2520donor1.CNhs11065.11468-119C1.hg38.nobarcode.ctss.bed.gz
+|id=FF:11468-119C1
+|is_a=EFO:0002091;;FF:0000140
+|is_obsolete=
+|library_id=CNhs11065
+|library_id_phase_based=2:CNhs11065
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11468
+|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10006.CCGTCC.11468
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11468
+|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10006.CCGTCC.11468
+|name=Preadipocyte - omental, donor1
+|namespace=FANTOM5
+|part_of=
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+|profile_hcage=CNhs11065,LSID723,release008,COMPLETED
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+|rna_box=119
+|rna_catalog_number=N/A
+|rna_concentration=0.47
+|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
+|rna_lot_number=
+|rna_od260/230=1.9
+|rna_od260/280=1.98
+|rna_position=C1
+|rna_rin=
+|rna_sample_type=total RNA
+|rna_tube_id=119C1
+|rna_weight_ug=11.8
+|rnaseq_library_id=SRhi10006.CCGTCC
+|sample_age=58
+|sample_category=primary cells
+|sample_cell_catalog=F-OP-F
+|sample_cell_line=
+|sample_cell_lot=lot:OM042105B
+|sample_cell_type=preadipocyte
+|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
+|sample_company=Zenbio
+|sample_description=
+|sample_dev_stage=58 years old adult
+|sample_disease=
+|sample_donor(cell lot)=
+|sample_ethnicity=C
+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.09282612511634e-227!GO:0005737;cytoplasm;2.86467714564485e-175!GO:0043226;organelle;2.57947696658624e-140!GO:0043229;intracellular organelle;5.75927769893897e-140!GO:0043231;intracellular membrane-bound organelle;1.48049210788418e-139!GO:0043227;membrane-bound organelle;2.27588208399964e-139!GO:0044444;cytoplasmic part;1.53634246999194e-138!GO:0044422;organelle part;3.24792884106034e-102!GO:0044446;intracellular organelle part;7.57945644835968e-101!GO:0005515;protein binding;7.06245060235582e-71!GO:0032991;macromolecular complex;8.06157593379866e-68!GO:0044238;primary metabolic process;2.50128339647653e-65!GO:0044237;cellular metabolic process;2.78520642381945e-64!GO:0030529;ribonucleoprotein complex;7.34863846142899e-63!GO:0043170;macromolecule metabolic process;5.87559534352679e-57!GO:0005739;mitochondrion;1.28894734841952e-55!GO:0043233;organelle lumen;2.89804987768605e-55!GO:0031974;membrane-enclosed lumen;2.89804987768605e-55!GO:0031090;organelle membrane;3.33107505056898e-52!GO:0044428;nuclear part;3.05898802015624e-49!GO:0003723;RNA binding;6.59150240780726e-48!GO:0019538;protein metabolic process;5.40937491633868e-45!GO:0015031;protein transport;2.18524628987611e-42!GO:0033036;macromolecule localization;1.4133274299912e-40!GO:0044260;cellular macromolecule metabolic process;4.79162162581637e-40!GO:0045184;establishment of protein localization;2.42639785261663e-39!GO:0005840;ribosome;2.64813506217083e-39!GO:0044267;cellular protein metabolic process;7.13266319499687e-39!GO:0006412;translation;5.18085234020052e-38!GO:0008104;protein localization;5.76834735535543e-38!GO:0044429;mitochondrial part;5.15569979069253e-37!GO:0009058;biosynthetic process;1.06577266817357e-36!GO:0005634;nucleus;1.35272942086165e-36!GO:0016043;cellular component organization and biogenesis;4.00609930427921e-36!GO:0003735;structural constituent of ribosome;2.19748083562367e-34!GO:0005829;cytosol;6.51181841915732e-34!GO:0031967;organelle envelope;7.94764178823155e-34!GO:0031975;envelope;1.13949277101547e-33!GO:0043234;protein complex;3.5023371914749e-33!GO:0006396;RNA processing;1.10338022652615e-32!GO:0046907;intracellular transport;1.26532372143625e-32!GO:0044249;cellular biosynthetic process;5.62777277464525e-32!GO:0009059;macromolecule biosynthetic process;4.97994279480404e-31!GO:0031981;nuclear lumen;7.52967560215717e-30!GO:0033279;ribosomal subunit;1.10634256498018e-29!GO:0006886;intracellular protein transport;2.14151484228979e-28!GO:0016071;mRNA metabolic process;5.53940805486015e-28!GO:0005783;endoplasmic reticulum;2.03477684806197e-26!GO:0043283;biopolymer metabolic process;2.94649803311743e-26!GO:0010467;gene expression;1.47312757929303e-25!GO:0008380;RNA splicing;2.81414308803788e-25!GO:0005740;mitochondrial envelope;3.92167247224639e-25!GO:0031966;mitochondrial membrane;4.43704757948831e-24!GO:0006397;mRNA processing;1.13793868123338e-23!GO:0012505;endomembrane system;8.71471957881556e-23!GO:0019866;organelle inner membrane;3.60193567802775e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.21553977654142e-22!GO:0005743;mitochondrial inner membrane;1.55349531841771e-21!GO:0044432;endoplasmic reticulum part;1.14857999139748e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.00069270613306e-20!GO:0006457;protein folding;4.2091592053185e-20!GO:0065003;macromolecular complex assembly;4.65882278752182e-20!GO:0006119;oxidative phosphorylation;1.665617912879e-19!GO:0051649;establishment of cellular localization;2.1373761264691e-19!GO:0051641;cellular localization;2.29360302257125e-19!GO:0005654;nucleoplasm;6.01891480003736e-19!GO:0048770;pigment granule;1.48156848195596e-18!GO:0042470;melanosome;1.48156848195596e-18!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.53981787204549e-18!GO:0005794;Golgi apparatus;1.93251461120571e-18!GO:0022607;cellular component assembly;5.87197298410248e-18!GO:0005681;spliceosome;7.06703198668802e-18!GO:0044445;cytosolic part;1.55282849575676e-17!GO:0044455;mitochondrial membrane part;2.49300420940149e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.23525444310105e-16!GO:0016462;pyrophosphatase activity;4.96809329194677e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;6.23433142898643e-16!GO:0044451;nucleoplasm part;7.58124948953736e-16!GO:0006996;organelle organization and biogenesis;8.84615937443594e-16!GO:0015934;large ribosomal subunit;9.75404040116504e-16!GO:0048193;Golgi vesicle transport;1.504202807904e-15!GO:0008134;transcription factor binding;1.91514445997813e-15!GO:0000166;nucleotide binding;2.27410484951105e-15!GO:0017111;nucleoside-triphosphatase activity;2.50851697232495e-15!GO:0016874;ligase activity;3.40448380196748e-15!GO:0051186;cofactor metabolic process;3.71433203906213e-15!GO:0006512;ubiquitin cycle;4.0705499643919e-15!GO:0015935;small ribosomal subunit;9.00411147371893e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.01567740287286e-14!GO:0051082;unfolded protein binding;2.11586396448717e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.14397593275728e-14!GO:0031980;mitochondrial lumen;2.32525312277096e-14!GO:0005759;mitochondrial matrix;2.32525312277096e-14!GO:0016192;vesicle-mediated transport;2.67906802887137e-14!GO:0006605;protein targeting;3.73163206049125e-14!GO:0022618;protein-RNA complex assembly;3.86837626840172e-14!GO:0019941;modification-dependent protein catabolic process;4.20905816400445e-14!GO:0043632;modification-dependent macromolecule catabolic process;4.20905816400445e-14!GO:0005746;mitochondrial respiratory chain;4.49844573289409e-14!GO:0044257;cellular protein catabolic process;4.53564851641985e-14!GO:0006511;ubiquitin-dependent protein catabolic process;6.01096458901563e-14!GO:0044265;cellular macromolecule catabolic process;6.08809591503131e-14!GO:0005789;endoplasmic reticulum membrane;7.01125654678169e-14!GO:0043228;non-membrane-bound organelle;1.89028921432892e-13!GO:0043232;intracellular non-membrane-bound organelle;1.89028921432892e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.00876601589839e-13!GO:0043285;biopolymer catabolic process;3.02924920374511e-13!GO:0000502;proteasome complex (sensu Eukaryota);6.57269000713281e-13!GO:0008135;translation factor activity, nucleic acid binding;8.94655217060226e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.45109025185148e-12!GO:0003954;NADH dehydrogenase activity;2.45109025185148e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.45109025185148e-12!GO:0005730;nucleolus;2.8050251425307e-12!GO:0030163;protein catabolic process;3.57603021442741e-12!GO:0006732;coenzyme metabolic process;3.90818637655008e-12!GO:0009057;macromolecule catabolic process;5.57444436572543e-12!GO:0044248;cellular catabolic process;5.57444436572543e-12!GO:0009055;electron carrier activity;8.59217474551027e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.34246623781198e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.49414639975628e-11!GO:0043412;biopolymer modification;1.62856743646302e-11!GO:0005793;ER-Golgi intermediate compartment;1.74664141227167e-11!GO:0005761;mitochondrial ribosome;2.98811101844135e-11!GO:0000313;organellar ribosome;2.98811101844135e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.75596233792237e-11!GO:0042775;organelle ATP synthesis coupled electron transport;8.09330119435976e-11!GO:0042773;ATP synthesis coupled electron transport;8.09330119435976e-11!GO:0030964;NADH dehydrogenase complex (quinone);9.83933938226334e-11!GO:0045271;respiratory chain complex I;9.83933938226334e-11!GO:0005747;mitochondrial respiratory chain complex I;9.83933938226334e-11!GO:0006464;protein modification process;9.91693460025957e-11!GO:0017076;purine nucleotide binding;1.0317656745e-10!GO:0032553;ribonucleotide binding;1.23854687881898e-10!GO:0032555;purine ribonucleotide binding;1.23854687881898e-10!GO:0003712;transcription cofactor activity;1.53776049325896e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.747016784696e-10!GO:0008565;protein transporter activity;2.98071580438608e-10!GO:0012501;programmed cell death;6.85275911987555e-10!GO:0005635;nuclear envelope;1.33649956467845e-09!GO:0006915;apoptosis;1.33649956467845e-09!GO:0009259;ribonucleotide metabolic process;1.50926585299382e-09!GO:0003743;translation initiation factor activity;1.71858662053961e-09!GO:0005788;endoplasmic reticulum lumen;1.93284161717046e-09!GO:0016070;RNA metabolic process;1.98180574408214e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.56500001073128e-09!GO:0006413;translational initiation;3.01197600688731e-09!GO:0008639;small protein conjugating enzyme activity;3.29488718283257e-09!GO:0019787;small conjugating protein ligase activity;3.86939830422464e-09!GO:0006446;regulation of translational initiation;4.74956112986178e-09!GO:0009150;purine ribonucleotide metabolic process;4.90907521806291e-09!GO:0008219;cell death;5.14037638870694e-09!GO:0016265;death;5.14037638870694e-09!GO:0005768;endosome;5.5698693543859e-09!GO:0004842;ubiquitin-protein ligase activity;5.64154728199331e-09!GO:0048523;negative regulation of cellular process;6.14617055301966e-09!GO:0043687;post-translational protein modification;6.90231600428229e-09!GO:0006163;purine nucleotide metabolic process;7.31445993616651e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;7.51741372314646e-09!GO:0000375;RNA splicing, via transesterification reactions;7.51741372314646e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.51741372314646e-09!GO:0031965;nuclear membrane;8.40203650311819e-09!GO:0003676;nucleic acid binding;8.58949746037718e-09!GO:0005773;vacuole;1.06591512241847e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.0804355412512e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.27505459869693e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.40898809503649e-08!GO:0006913;nucleocytoplasmic transport;1.55568122568104e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.09029590601515e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.09029590601515e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.20760343540269e-08!GO:0009260;ribonucleotide biosynthetic process;2.35226110728526e-08!GO:0044431;Golgi apparatus part;2.35226110728526e-08!GO:0030120;vesicle coat;2.68133690091902e-08!GO:0030662;coated vesicle membrane;2.68133690091902e-08!GO:0051169;nuclear transport;2.71738985637933e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.76286547476509e-08!GO:0009141;nucleoside triphosphate metabolic process;2.76286547476509e-08!GO:0048475;coated membrane;3.09575850785138e-08!GO:0030117;membrane coat;3.09575850785138e-08!GO:0016491;oxidoreductase activity;3.1610348625398e-08!GO:0006164;purine nucleotide biosynthetic process;3.406537776249e-08!GO:0006259;DNA metabolic process;4.00661764455461e-08!GO:0016881;acid-amino acid ligase activity;4.06922010506093e-08!GO:0015986;ATP synthesis coupled proton transport;4.49185478888559e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.49185478888559e-08!GO:0016604;nuclear body;4.50328197172757e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.52271833015231e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.52271833015231e-08!GO:0006461;protein complex assembly;7.74930941724155e-08!GO:0003714;transcription corepressor activity;7.89706560090693e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.26224134483808e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.26224134483808e-08!GO:0009060;aerobic respiration;1.01043235157058e-07!GO:0005524;ATP binding;1.06920530269375e-07!GO:0032559;adenyl ribonucleotide binding;1.29458860468815e-07!GO:0030554;adenyl nucleotide binding;1.3541165084218e-07!GO:0017038;protein import;1.40803077568932e-07!GO:0016887;ATPase activity;1.41538347325766e-07!GO:0009056;catabolic process;1.74949044717993e-07!GO:0008654;phospholipid biosynthetic process;1.75639835673524e-07!GO:0045333;cellular respiration;1.81682995258389e-07!GO:0000323;lytic vacuole;1.90315238019302e-07!GO:0005764;lysosome;1.90315238019302e-07!GO:0019829;cation-transporting ATPase activity;2.08140108617029e-07!GO:0051188;cofactor biosynthetic process;2.09189026441221e-07!GO:0046034;ATP metabolic process;2.2095383556746e-07!GO:0044453;nuclear membrane part;2.23652380028407e-07!GO:0003924;GTPase activity;2.40679433419521e-07!GO:0048519;negative regulation of biological process;2.66314586712089e-07!GO:0031988;membrane-bound vesicle;2.76207531877969e-07!GO:0042623;ATPase activity, coupled;3.00484543426212e-07!GO:0042254;ribosome biogenesis and assembly;3.04267233122695e-07!GO:0016023;cytoplasmic membrane-bound vesicle;3.18113690262669e-07!GO:0016607;nuclear speck;4.29982797388319e-07!GO:0008361;regulation of cell size;5.71711017725617e-07!GO:0043069;negative regulation of programmed cell death;6.43990731313778e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.82809012069094e-07!GO:0006366;transcription from RNA polymerase II promoter;7.11769160633737e-07!GO:0016564;transcription repressor activity;7.30884460936299e-07!GO:0031982;vesicle;7.73049112129563e-07!GO:0006754;ATP biosynthetic process;7.98551362534413e-07!GO:0006753;nucleoside phosphate metabolic process;7.98551362534413e-07!GO:0007005;mitochondrion organization and biogenesis;8.99097724927035e-07!GO:0016049;cell growth;9.3698175434462e-07!GO:0006399;tRNA metabolic process;9.65884992658305e-07!GO:0043066;negative regulation of apoptosis;1.00734093587241e-06!GO:0031410;cytoplasmic vesicle;1.01478838381941e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.12491777524871e-06!GO:0005798;Golgi-associated vesicle;1.18793626286972e-06!GO:0051789;response to protein stimulus;1.78005401667411e-06!GO:0006986;response to unfolded protein;1.78005401667411e-06!GO:0044440;endosomal part;2.07119785019832e-06!GO:0010008;endosome membrane;2.07119785019832e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.08598191398807e-06!GO:0006974;response to DNA damage stimulus;2.17531272486314e-06!GO:0006099;tricarboxylic acid cycle;2.36530497603935e-06!GO:0046356;acetyl-CoA catabolic process;2.36530497603935e-06!GO:0065002;intracellular protein transport across a membrane;2.60448232191974e-06!GO:0051187;cofactor catabolic process;2.76893846431185e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.21038196699033e-06!GO:0004812;aminoacyl-tRNA ligase activity;3.21038196699033e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.21038196699033e-06!GO:0051246;regulation of protein metabolic process;3.45791303062314e-06!GO:0031252;leading edge;3.66967051012305e-06!GO:0009109;coenzyme catabolic process;3.86852032300181e-06!GO:0043038;amino acid activation;3.93068256001128e-06!GO:0006418;tRNA aminoacylation for protein translation;3.93068256001128e-06!GO:0043039;tRNA aminoacylation;3.93068256001128e-06!GO:0000151;ubiquitin ligase complex;4.76423831426739e-06!GO:0000139;Golgi membrane;5.01084429913192e-06!GO:0032446;protein modification by small protein conjugation;5.2563085811531e-06!GO:0016567;protein ubiquitination;5.36964147765175e-06!GO:0016469;proton-transporting two-sector ATPase complex;5.73738774026717e-06!GO:0001558;regulation of cell growth;6.1331775219815e-06!GO:0009108;coenzyme biosynthetic process;6.31701572492189e-06!GO:0006091;generation of precursor metabolites and energy;6.67647745256268e-06!GO:0005643;nuclear pore;6.82210145772558e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.64262507958423e-06!GO:0016787;hydrolase activity;7.72462083788052e-06!GO:0009117;nucleotide metabolic process;7.98651628935617e-06!GO:0006084;acetyl-CoA metabolic process;8.42880375589249e-06!GO:0006752;group transfer coenzyme metabolic process;1.04179339557432e-05!GO:0006916;anti-apoptosis;1.1235920867602e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.30639386957677e-05!GO:0043067;regulation of programmed cell death;1.3160417868526e-05!GO:0008026;ATP-dependent helicase activity;1.32060714310091e-05!GO:0004386;helicase activity;1.42168756130138e-05!GO:0005770;late endosome;1.48963866331065e-05!GO:0042981;regulation of apoptosis;1.49954596500067e-05!GO:0050794;regulation of cellular process;1.51189425252672e-05!GO:0007049;cell cycle;1.55704162917775e-05!GO:0005791;rough endoplasmic reticulum;1.62573132306775e-05!GO:0006613;cotranslational protein targeting to membrane;1.80569211938438e-05!GO:0005525;GTP binding;1.89038542244919e-05!GO:0019867;outer membrane;1.89950980787795e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.10784713075155e-05!GO:0030133;transport vesicle;2.35331653405137e-05!GO:0045259;proton-transporting ATP synthase complex;2.41116242595697e-05!GO:0016853;isomerase activity;2.61011928434468e-05!GO:0051170;nuclear import;2.73841373661037e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.97969482097654e-05!GO:0009719;response to endogenous stimulus;2.99231218661602e-05!GO:0005905;coated pit;3.02503650466883e-05!GO:0031968;organelle outer membrane;3.03603654781851e-05!GO:0045786;negative regulation of progression through cell cycle;3.36810121972542e-05!GO:0045454;cell redox homeostasis;3.37853448441537e-05!GO:0046474;glycerophospholipid biosynthetic process;3.45207485884164e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.53201970399293e-05!GO:0005667;transcription factor complex;3.54645222399729e-05!GO:0006606;protein import into nucleus;3.66064769101043e-05!GO:0030532;small nuclear ribonucleoprotein complex;5.82249561580116e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.82249561580116e-05!GO:0046930;pore complex;6.02698828792079e-05!GO:0030867;rough endoplasmic reticulum membrane;6.40194836560033e-05!GO:0032561;guanyl ribonucleotide binding;7.11209686839644e-05!GO:0019001;guanyl nucleotide binding;7.11209686839644e-05!GO:0006403;RNA localization;7.60281670339426e-05!GO:0050657;nucleic acid transport;7.85974336623183e-05!GO:0051236;establishment of RNA localization;7.85974336623183e-05!GO:0050658;RNA transport;7.85974336623183e-05!GO:0006281;DNA repair;9.40002512154435e-05!GO:0033116;ER-Golgi intermediate compartment membrane;0.000101777942414713!GO:0008610;lipid biosynthetic process;0.000106034404839712!GO:0000245;spliceosome assembly;0.00010895415598236!GO:0003724;RNA helicase activity;0.000128747305347754!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00013551346268476!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000141103808280094!GO:0030029;actin filament-based process;0.000155911609300141!GO:0004298;threonine endopeptidase activity;0.000156563169846657!GO:0043566;structure-specific DNA binding;0.000164876015528815!GO:0044262;cellular carbohydrate metabolic process;0.000168432337064972!GO:0016859;cis-trans isomerase activity;0.000170058379502892!GO:0005769;early endosome;0.000171194688288225!GO:0016740;transferase activity;0.000173566414536469!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000185343878527273!GO:0006793;phosphorus metabolic process;0.000185343878527273!GO:0006796;phosphate metabolic process;0.000185343878527273!GO:0005048;signal sequence binding;0.000190663521429617!GO:0005741;mitochondrial outer membrane;0.000201082470628644!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000201082470628644!GO:0003713;transcription coactivator activity;0.000212983887944858!GO:0006612;protein targeting to membrane;0.000222921365822744!GO:0031324;negative regulation of cellular metabolic process;0.000226233123013856!GO:0046467;membrane lipid biosynthetic process;0.00024229565636376!GO:0051726;regulation of cell cycle;0.000259418236586654!GO:0006364;rRNA processing;0.000261386924697569!GO:0030663;COPI coated vesicle membrane;0.000268114754853574!GO:0030126;COPI vesicle coat;0.000268114754853574!GO:0003697;single-stranded DNA binding;0.000271522837863933!GO:0004576;oligosaccharyl transferase activity;0.000309148808164287!GO:0046489;phosphoinositide biosynthetic process;0.000327369651592815!GO:0006650;glycerophospholipid metabolic process;0.000327693972367719!GO:0016044;membrane organization and biogenesis;0.000334616710339763!GO:0005762;mitochondrial large ribosomal subunit;0.000353797883252496!GO:0000315;organellar large ribosomal subunit;0.000353797883252496!GO:0051427;hormone receptor binding;0.00035384005862906!GO:0008250;oligosaccharyl transferase complex;0.000362913108692952!GO:0000074;regulation of progression through cell cycle;0.000372066401568334!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000403431067368819!GO:0016072;rRNA metabolic process;0.000410017733320374!GO:0040008;regulation of growth;0.000447180956971085!GO:0050789;regulation of biological process;0.000456242199923292!GO:0030137;COPI-coated vesicle;0.000498765246965801!GO:0016310;phosphorylation;0.000511428895577018!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000527040145073293!GO:0015399;primary active transmembrane transporter activity;0.000527040145073293!GO:0006839;mitochondrial transport;0.000566014835888216!GO:0043021;ribonucleoprotein binding;0.000567782577596134!GO:0005885;Arp2/3 protein complex;0.000569113587420996!GO:0006891;intra-Golgi vesicle-mediated transport;0.000585713310746337!GO:0016563;transcription activator activity;0.000616529775950759!GO:0043623;cellular protein complex assembly;0.000616529775950759!GO:0035257;nuclear hormone receptor binding;0.000631736258959289!GO:0007050;cell cycle arrest;0.000689296522600781!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000692743847165197!GO:0004177;aminopeptidase activity;0.000839102200914744!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000905826646160777!GO:0006643;membrane lipid metabolic process;0.00096988351004128!GO:0008092;cytoskeletal protein binding;0.000980875416643892!GO:0051920;peroxiredoxin activity;0.000996944003358855!GO:0009892;negative regulation of metabolic process;0.0010027279100122!GO:0018196;peptidyl-asparagine modification;0.00109032665157827!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00109032665157827!GO:0022402;cell cycle process;0.00111385030269525!GO:0051028;mRNA transport;0.00120296510396855!GO:0030118;clathrin coat;0.00123151692515317!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00125060359531259!GO:0008186;RNA-dependent ATPase activity;0.00133981516552579!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00146636730510644!GO:0016779;nucleotidyltransferase activity;0.00155119588887437!GO:0000314;organellar small ribosomal subunit;0.00159784265676612!GO:0005763;mitochondrial small ribosomal subunit;0.00159784265676612!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00174018722887749!GO:0006979;response to oxidative stress;0.00176069096992461!GO:0007264;small GTPase mediated signal transduction;0.00180557405537704!GO:0043284;biopolymer biosynthetic process;0.00188165447519219!GO:0016568;chromatin modification;0.00194503997269521!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00196932746728327!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00196932746728327!GO:0007243;protein kinase cascade;0.00209641380647865!GO:0016197;endosome transport;0.00212380749643615!GO:0009165;nucleotide biosynthetic process;0.00227796859750561!GO:0007040;lysosome organization and biogenesis;0.00229469315337247!GO:0030658;transport vesicle membrane;0.00229469315337247!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00234148631963474!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00237639390609062!GO:0048471;perinuclear region of cytoplasm;0.00239262605568774!GO:0030027;lamellipodium;0.00240253782281212!GO:0007006;mitochondrial membrane organization and biogenesis;0.00244411928693178!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00258492203949023!GO:0043681;protein import into mitochondrion;0.00264490862414856!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00278267285650436!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00278746190206663!GO:0030132;clathrin coat of coated pit;0.00286803045905692!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00287243007993212!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00287243007993212!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00287243007993212!GO:0043433;negative regulation of transcription factor activity;0.00300213373285646!GO:0006626;protein targeting to mitochondrion;0.00306733062975319!GO:0006497;protein amino acid lipidation;0.00311166153974126!GO:0030176;integral to endoplasmic reticulum membrane;0.00313272604795875!GO:0006644;phospholipid metabolic process;0.00314355637530874!GO:0003729;mRNA binding;0.00317316189957198!GO:0030384;phosphoinositide metabolic process;0.00324191612297345!GO:0030659;cytoplasmic vesicle membrane;0.00329432829494464!GO:0019899;enzyme binding;0.00329727716082123!GO:0004004;ATP-dependent RNA helicase activity;0.00329727716082123!GO:0016126;sterol biosynthetic process;0.00350032718291477!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0035209617818437!GO:0048500;signal recognition particle;0.00375525700670076!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0037623665265615!GO:0019843;rRNA binding;0.00388400725658543!GO:0048487;beta-tubulin binding;0.00399892254237481!GO:0043492;ATPase activity, coupled to movement of substances;0.00410939684025133!GO:0006892;post-Golgi vesicle-mediated transport;0.00414006681098895!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00424186618253299!GO:0019752;carboxylic acid metabolic process;0.00436696014775324!GO:0005774;vacuolar membrane;0.00442190157160407!GO:0001726;ruffle;0.00443358325203578!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00446701248907122!GO:0006082;organic acid metabolic process;0.004699847955902!GO:0015992;proton transport;0.00476563538600708!GO:0006414;translational elongation;0.00483433913436052!GO:0007033;vacuole organization and biogenesis;0.0048672036285723!GO:0006509;membrane protein ectodomain proteolysis;0.00497661948799283!GO:0033619;membrane protein proteolysis;0.00497661948799283!GO:0051168;nuclear export;0.00506623593956676!GO:0006818;hydrogen transport;0.00508007591503959!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00512193278636966!GO:0045045;secretory pathway;0.00520738223668264!GO:0044255;cellular lipid metabolic process;0.00521269680319451!GO:0006506;GPI anchor biosynthetic process;0.00530171869767129!GO:0003899;DNA-directed RNA polymerase activity;0.00530171869767129!GO:0051252;regulation of RNA metabolic process;0.00560345064226684!GO:0051087;chaperone binding;0.00572148074323391!GO:0045792;negative regulation of cell size;0.00573766334155027!GO:0016481;negative regulation of transcription;0.00573766334155027!GO:0022890;inorganic cation transmembrane transporter activity;0.00585371986076003!GO:0035258;steroid hormone receptor binding;0.00588766362766249!GO:0030521;androgen receptor signaling pathway;0.00607883045865683!GO:0031072;heat shock protein binding;0.00614095948496543!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00621745244273068!GO:0048522;positive regulation of cellular process;0.00642640911068358!GO:0030134;ER to Golgi transport vesicle;0.00650054670220473!GO:0006383;transcription from RNA polymerase III promoter;0.00652082566583933!GO:0030127;COPII vesicle coat;0.00654136209806727!GO:0012507;ER to Golgi transport vesicle membrane;0.00654136209806727!GO:0050811;GABA receptor binding;0.00676939669531707!GO:0006790;sulfur metabolic process;0.00679117986263855!GO:0030660;Golgi-associated vesicle membrane;0.00689156192597854!GO:0046483;heterocycle metabolic process;0.00703937585081078!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00703937585081078!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00712526787583967!GO:0045047;protein targeting to ER;0.00712526787583967!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00731248883944935!GO:0006505;GPI anchor metabolic process;0.00738698826944804!GO:0031901;early endosome membrane;0.00738698826944804!GO:0030308;negative regulation of cell growth;0.00743115090831827!GO:0051540;metal cluster binding;0.00743115090831827!GO:0051536;iron-sulfur cluster binding;0.00743115090831827!GO:0042158;lipoprotein biosynthetic process;0.00757949911118675!GO:0030518;steroid hormone receptor signaling pathway;0.0079192733333269!GO:0000096;sulfur amino acid metabolic process;0.0079441639295738!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00796705483638596!GO:0003746;translation elongation factor activity;0.00803080441078264!GO:0007034;vacuolar transport;0.00809416035015484!GO:0003711;transcription elongation regulator activity;0.00830106424361487!GO:0005583;fibrillar collagen;0.00860218728764497!GO:0044433;cytoplasmic vesicle part;0.00878377076555805!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.00889598789989117!GO:0005869;dynactin complex;0.00894621248606313!GO:0003690;double-stranded DNA binding;0.00894710293674347!GO:0007010;cytoskeleton organization and biogenesis;0.00903112608443883!GO:0031902;late endosome membrane;0.00940839576620226!GO:0006260;DNA replication;0.00992077827712129!GO:0033673;negative regulation of kinase activity;0.00992077827712129!GO:0006469;negative regulation of protein kinase activity;0.00992077827712129!GO:0008139;nuclear localization sequence binding;0.0100411935416568!GO:0043488;regulation of mRNA stability;0.0100993639521001!GO:0043487;regulation of RNA stability;0.0100993639521001!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0105564046214649!GO:0017166;vinculin binding;0.0106830019124471!GO:0000059;protein import into nucleus, docking;0.0106830019124471!GO:0012506;vesicle membrane;0.0106830019124471!GO:0005813;centrosome;0.0106863733292431!GO:0006740;NADPH regeneration;0.0107859772442948!GO:0006098;pentose-phosphate shunt;0.0107859772442948!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0108779735429696!GO:0006984;ER-nuclear signaling pathway;0.0109682475352746!GO:0006402;mRNA catabolic process;0.0113715709189549!GO:0016363;nuclear matrix;0.011671780621578!GO:0044437;vacuolar part;0.0117122784464055!GO:0065009;regulation of a molecular function;0.0117889491490537!GO:0030880;RNA polymerase complex;0.0121767679281565!GO:0051128;regulation of cellular component organization and biogenesis;0.0122159118537259!GO:0006323;DNA packaging;0.0122159118537259!GO:0008312;7S RNA binding;0.012247041458429!GO:0046519;sphingoid metabolic process;0.0122785611896467!GO:0001527;microfibril;0.0123453072681262!GO:0030119;AP-type membrane coat adaptor complex;0.0123695083625672!GO:0051348;negative regulation of transferase activity;0.0124228667092496!GO:0016860;intramolecular oxidoreductase activity;0.0125506915020974!GO:0006354;RNA elongation;0.0134680440116608!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0135221510272551!GO:0015002;heme-copper terminal oxidase activity;0.0135221510272551!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0135221510272551!GO:0004129;cytochrome-c oxidase activity;0.0135221510272551!GO:0031543;peptidyl-proline dioxygenase activity;0.0137231627553762!GO:0005765;lysosomal membrane;0.0137818049140053!GO:0009967;positive regulation of signal transduction;0.0138556567986875!GO:0006352;transcription initiation;0.0140045381178528!GO:0031418;L-ascorbic acid binding;0.0141469842524786!GO:0006739;NADP metabolic process;0.0146455723113064!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0148494821980605!GO:0008180;signalosome;0.0149078002569184!GO:0016408;C-acyltransferase activity;0.0149317558731449!GO:0015630;microtubule cytoskeleton;0.014955335150897!GO:0030503;regulation of cell redox homeostasis;0.0156479404445042!GO:0005581;collagen;0.0158296327334462!GO:0005815;microtubule organizing center;0.0164754068878981!GO:0006695;cholesterol biosynthetic process;0.0164812632332893!GO:0006897;endocytosis;0.0165580211578447!GO:0010324;membrane invagination;0.0165580211578447!GO:0030125;clathrin vesicle coat;0.0165787341376672!GO:0030665;clathrin coated vesicle membrane;0.0165787341376672!GO:0006607;NLS-bearing substrate import into nucleus;0.0166027724775954!GO:0030041;actin filament polymerization;0.0173654204885937!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0174163056816692!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0174163056816692!GO:0033559;unsaturated fatty acid metabolic process;0.0176315097841744!GO:0006636;unsaturated fatty acid biosynthetic process;0.0176315097841744!GO:0000049;tRNA binding;0.0178646318573154!GO:0000339;RNA cap binding;0.0182072759651571!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0183146516835197!GO:0007041;lysosomal transport;0.0185705115320003!GO:0005862;muscle thin filament tropomyosin;0.0186782174340595!GO:0006672;ceramide metabolic process;0.0190959240718256!GO:0030131;clathrin adaptor complex;0.0191199238371854!GO:0065007;biological regulation;0.0198500380381956!GO:0051287;NAD binding;0.0199998146725249!GO:0050681;androgen receptor binding;0.0203104287734923!GO:0005586;collagen type III;0.0213692068796346!GO:0019222;regulation of metabolic process;0.0213692068796346!GO:0007021;tubulin folding;0.021591121067429!GO:0035035;histone acetyltransferase binding;0.0216497397404106!GO:0000287;magnesium ion binding;0.0219596261066569!GO:0001872;zymosan binding;0.0224392981024281!GO:0001878;response to yeast;0.0224392981024281!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0224627993398595!GO:0000428;DNA-directed RNA polymerase complex;0.0224627993398595!GO:0016272;prefoldin complex;0.0231520760875018!GO:0003779;actin binding;0.0233122836374431!GO:0005520;insulin-like growth factor binding;0.0233606670257723!GO:0016251;general RNA polymerase II transcription factor activity;0.0236487645532756!GO:0044420;extracellular matrix part;0.0239023393319141!GO:0000209;protein polyubiquitination;0.0245891841059106!GO:0030865;cortical cytoskeleton organization and biogenesis;0.024677392008484!GO:0065004;protein-DNA complex assembly;0.0246932260483795!GO:0006118;electron transport;0.0247139341821406!GO:0015631;tubulin binding;0.0254889870972992!GO:0008147;structural constituent of bone;0.0257309324186793!GO:0050662;coenzyme binding;0.0259119551790518!GO:0007030;Golgi organization and biogenesis;0.0260286991847422!GO:0031529;ruffle organization and biogenesis;0.0262200889763085!GO:0006693;prostaglandin metabolic process;0.0262533857565945!GO:0006692;prostanoid metabolic process;0.0262533857565945!GO:0019798;procollagen-proline dioxygenase activity;0.027038921478519!GO:0009112;nucleobase metabolic process;0.0273671491287865!GO:0006595;polyamine metabolic process;0.0273671491287865!GO:0006289;nucleotide-excision repair;0.0274558735731669!GO:0051329;interphase of mitotic cell cycle;0.0279904568377981!GO:0032940;secretion by cell;0.0286719433742912!GO:0008320;protein transmembrane transporter activity;0.0287440135338239!GO:0043022;ribosome binding;0.0295739009959406!GO:0006749;glutathione metabolic process;0.0308789196409902!GO:0008047;enzyme activator activity;0.0311725514960893!GO:0005595;collagen type XII;0.0313119040043505!GO:0005832;chaperonin-containing T-complex;0.0316382991080707!GO:0030522;intracellular receptor-mediated signaling pathway;0.0317074457110223!GO:0006778;porphyrin metabolic process;0.0322408456668429!GO:0033013;tetrapyrrole metabolic process;0.0322408456668429!GO:0051325;interphase;0.0326459142742859!GO:0048468;cell development;0.0329962346423013!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0332318329268284!GO:0003923;GPI-anchor transamidase activity;0.033261402097433!GO:0016255;attachment of GPI anchor to protein;0.033261402097433!GO:0042765;GPI-anchor transamidase complex;0.033261402097433!GO:0007160;cell-matrix adhesion;0.0334540737786729!GO:0005801;cis-Golgi network;0.034006578198615!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0342821099653466!GO:0048144;fibroblast proliferation;0.0343247252224973!GO:0048145;regulation of fibroblast proliferation;0.0343247252224973!GO:0031625;ubiquitin protein ligase binding;0.0343857742909696!GO:0008154;actin polymerization and/or depolymerization;0.0344157485095463!GO:0045926;negative regulation of growth;0.0344157485095463!GO:0008652;amino acid biosynthetic process;0.0351879339655505!GO:0004287;prolyl oligopeptidase activity;0.0358250045088291!GO:0030145;manganese ion binding;0.0363733660119959!GO:0031589;cell-substrate adhesion;0.0365843707633947!GO:0006629;lipid metabolic process;0.0370269719268564!GO:0006769;nicotinamide metabolic process;0.0371169653940148!GO:0051101;regulation of DNA binding;0.0371611157654995!GO:0043086;negative regulation of catalytic activity;0.0377716135624855!GO:0051098;regulation of binding;0.0380963755722371!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0384042159539745!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0384042159539745!GO:0022408;negative regulation of cell-cell adhesion;0.0391454552570592!GO:0008033;tRNA processing;0.0393360827232033!GO:0032984;macromolecular complex disassembly;0.0393697937545769!GO:0006767;water-soluble vitamin metabolic process;0.0398816301284114!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0403617103636794!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0404501863030382!GO:0030833;regulation of actin filament polymerization;0.0416177599418327!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0420373504741724!GO:0000030;mannosyltransferase activity;0.0420648302061984!GO:0008287;protein serine/threonine phosphatase complex;0.0420648302061984!GO:0005777;peroxisome;0.042584061329422!GO:0042579;microbody;0.042584061329422!GO:0044452;nucleolar part;0.0432028355011065!GO:0048146;positive regulation of fibroblast proliferation;0.0439801740589944!GO:0008234;cysteine-type peptidase activity;0.0441819795142935!GO:0008601;protein phosphatase type 2A regulator activity;0.0447981858874233!GO:0030508;thiol-disulfide exchange intermediate activity;0.0452722065390545!GO:0030032;lamellipodium biogenesis;0.045864926860797!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0460481777133887!GO:0003756;protein disulfide isomerase activity;0.0466525797811945!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0466525797811945!GO:0006302;double-strand break repair;0.0484698785750104!GO:0042168;heme metabolic process;0.0485735102924689!GO:0004197;cysteine-type endopeptidase activity;0.0492605722217429!GO:0044438;microbody part;0.0495718217089392!GO:0044439;peroxisomal part;0.0495718217089392
+|sample_id=11468
+|sample_note=
+|sample_sex=female
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=omentum
+|top_motifs=TAL1_TCF{3,4,12}:2.37535353476;HIF1A:2.22782089852;HMGA1,2:2.1544250167;GZF1:2.05895595024;ESR1:1.93665325315;MYBL2:1.8923182423;NKX3-1:1.88351741287;TEF:1.81935242524;IKZF1:1.7959183239;RXRA_VDR{dimer}:1.75294725866;HOX{A5,B5}:1.72683946664;HES1:1.71792719606;GLI1..3:1.6783957263;FOXL1:1.65776601795;TEAD1:1.65285563854;MAFB:1.61140198655;XBP1:1.55990425847;NFIX:1.51432436033;UFEwm:1.47545087888;NFE2L1:1.45788852056;NKX2-2,8:1.41236785758;HOX{A4,D4}:1.40707148031;HBP1_HMGB_SSRP1_UBTF:1.39538347951;EBF1:1.38473850142;ATF6:1.32778524434;ZNF238:1.32327873248;SMAD1..7,9:1.2814499772;ZNF423:1.21837101284;EVI1:1.19195367569;SPZ1:1.17030678207;NR3C1:1.14377041617;NKX2-1,4:1.13920681536;AIRE:1.1145731877;TP53:1.06923641413;KLF4:1.05711352243;GCM1,2:1.02618371192;TFAP4:1.01584127823;PAX1,9:0.998451362979;NFATC1..3:0.977454987614;RXR{A,B,G}:0.963093053231;EN1,2:0.95836469823;TLX1..3_NFIC{dimer}:0.955573135353;HLF:0.909493591821;SRF:0.885980536019;DBP:0.879365046344;FOXO1,3,4:0.873549621849;ADNP_IRX_SIX_ZHX:0.863464555166;MTE{core}:0.862888249812;NHLH1,2:0.862041501247;GTF2I:0.851771654146;HMX1:0.801272249323;ALX4:0.792436265223;TFAP2B:0.76899676467;MAZ:0.768414323789;bHLH_family:0.739519080071;NANOG{mouse}:0.731243637116;GTF2A1,2:0.705681676156;ZNF148:0.694872504698;HOX{A6,A7,B6,B7}:0.682433989454;SREBF1,2:0.681634122643;CDC5L:0.646291550568;HIC1:0.622020363895;NR6A1:0.618892258715;LHX3,4:0.612535778847;HSF1,2:0.6110090737;PAX5:0.596375702656;TBX4,5:0.582948009155;HAND1,2:0.578705767549;TFAP2{A,C}:0.553251433812;GATA4:0.528533183121;MYFfamily:0.511384192495;NFE2L2:0.505923834702;PATZ1:0.470594701559;SOX17:0.470367380897;FOXA2:0.458325883441;ZNF384:0.421225212834;TFCP2:0.418244710848;MZF1:0.415869472443;T:0.344773795863;POU6F1:0.344386923899;STAT1,3:0.341307014891;NKX3-2:0.325396139184;ARID5B:0.324927668611;MTF1:0.313066190885;STAT2,4,6:0.311717658735;ESRRA:0.285292428346;MEF2{A,B,C,D}:0.269273580108;CEBPA,B_DDIT3:0.26627022975;FOX{D1,D2}:0.250474465988;PRDM1:0.244028913319;EP300:0.209759054215;PAX4:0.181263860247;AHR_ARNT_ARNT2:0.166007471519;XCPE1{core}:0.160544267991;STAT5{A,B}:0.156164967358;GFI1B:0.104103547155;TBP:0.0890242999507;ELK1,4_GABP{A,B1}:0.0399337661452;ZIC1..3:0.00235698496911;PAX6:-0.00336821911351;IRF1,2:-0.00792271643188;HNF1A:-0.013465836671;TGIF1:-0.0171606306756;REST:-0.0238030660977;ZNF143:-0.0250329990931;FOX{I1,J2}:-0.0533420818048;ZBTB6:-0.0626887989114;BACH2:-0.0696171905422;SOX5:-0.0959221055676;NFIL3:-0.129083900964;FOXM1:-0.132801152472;EGR1..3:-0.152597548836;NRF1:-0.160779479561;RREB1:-0.175897069146;AR:-0.185346305176;MED-1{core}:-0.207920646438;TLX2:-0.208676707015;PAX2:-0.223641094252;MYB:-0.226579244523;ZFP161:-0.242041803707;FOXP3:-0.258515570228;HNF4A_NR2F1,2:-0.259941035043;RFX1:-0.265147561444;ZBTB16:-0.273826036863;TOPORS:-0.286572099171;YY1:-0.287676521682;JUN:-0.299512086864;HOXA9_MEIS1:-0.309656366469;FOSL2:-0.329020999;FOXN1:-0.331652803437;FOS_FOS{B,L1}_JUN{B,D}:-0.338589333724;VSX1,2:-0.349872207077;ATF2:-0.352690007033;POU3F1..4:-0.355223577113;SP1:-0.373735390563;CRX:-0.374672737281;SOX2:-0.391891053393;NKX6-1,2:-0.391966547851;FOXD3:-0.399571152274;ATF5_CREB3:-0.409022093825;PAX3,7:-0.415415263771;ETS1,2:-0.426202254798;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.429136206625;CREB1:-0.435515354943;NFE2:-0.436730798055;RUNX1..3:-0.439415593905;ATF4:-0.476614439217;DMAP1_NCOR{1,2}_SMARC:-0.512608577097;SPI1:-0.532494021793;LEF1_TCF7_TCF7L1,2:-0.54435085334;PPARG:-0.55003879704;PRRX1,2:-0.578831408042;LMO2:-0.585654974329;ELF1,2,4:-0.593506504176;TFDP1:-0.597933526311;IRF7:-0.60870098128;BPTF:-0.6335351223;GATA6:-0.67665528772;FOXQ1:-0.676835096684;NFKB1_REL_RELA:-0.682881995784;IKZF2:-0.688191496516;CUX2:-0.694944286535;SPIB:-0.699440361928;ONECUT1,2:-0.704806358509;POU5F1:-0.710553794836;ZEB1:-0.737750535641;SNAI1..3:-0.7580819445;PAX8:-0.782916299359;CDX1,2,4:-0.821428601941;NR1H4:-0.823928580915;POU1F1:-0.839370493444;GFI1:-0.842652876878;FOXP1:-0.865007674655;BREu{core}:-0.886547894826;FOX{F1,F2,J1}:-0.902471509591;RORA:-0.904645211913;OCT4_SOX2{dimer}:-0.906742130807;RBPJ:-1.00385752131;NKX2-3_NKX2-5:-1.06798517797;RFX2..5_RFXANK_RFXAP:-1.07213150495;MYOD1:-1.07282990604;NR5A1,2:-1.08270538873;E2F1..5:-1.12108213233;SOX{8,9,10}:-1.17569188729;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.18570025342;NANOG:-1.19041547029;PITX1..3:-1.19627298493;NFY{A,B,C}:-1.28402260705;PDX1:-1.48223155471;PBX1:-1.50952453097;ALX1:-1.81351213982;POU2F1..3:-2.38422253686
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11468-119C1;search_select_hide=table117:FF:11468-119C1
 }}

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FF:11468-119C1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:03, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0