FF:11414-118F1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005909 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005909 | ||
|accession_numbers=CAGE;DRX008228;DRR009100;DRZ000525;DRZ001910;DRZ011875;DRZ013260 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037085;DRR041451;DRZ007093 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0000487,UBERON:0004638,UBERON:0007500,UBERON:0001981,UBERON:0010523,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001915,UBERON:0004535,UBERON:0001982,UBERON:0004537,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:0002144 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000001,FF:0000050 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor3.CNhs12024.11414-118F1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor3.CNhs12024.11414-118F1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor3.CNhs12024.11414-118F1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor3.CNhs12024.11414-118F1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor3.CNhs12024.11414-118F1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11414-118F1 | |id=FF:11414-118F1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000050 | ||
|is_obsolete= | |||
|library_id=CNhs12024 | |||
|library_id_phase_based=2:CNhs12024 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11414 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10006.GTGGCC.11414 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11414 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10006.GTGGCC.11414 | |||
|name=Endothelial Cells - Microvascular, donor3 | |name=Endothelial Cells - Microvascular, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12024,LSID837,release011,COMPLETED | |profile_hcage=CNhs12024,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10006,,, | |profile_srnaseq=SRhi10006,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=CA100-R10a | |rna_catalog_number=CA100-R10a | ||
| Line 56: | Line 82: | ||
|rna_tube_id=118F1 | |rna_tube_id=118F1 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10006.GTGGCC | |||
|sample_age=47 | |sample_age=47 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.36588823297148e-215!GO:0005737;cytoplasm;1.14414159599365e-190!GO:0043226;organelle;1.19286864165085e-166!GO:0043229;intracellular organelle;3.79400414742028e-166!GO:0043231;intracellular membrane-bound organelle;8.92029808366031e-161!GO:0043227;membrane-bound organelle;1.43804874481428e-160!GO:0044444;cytoplasmic part;2.61782040253719e-135!GO:0044422;organelle part;1.58779790629468e-115!GO:0044446;intracellular organelle part;3.05175789564874e-114!GO:0005515;protein binding;7.87287061993306e-88!GO:0044238;primary metabolic process;3.94248676320762e-74!GO:0032991;macromolecular complex;1.44943961088545e-73!GO:0044237;cellular metabolic process;4.48836082221896e-73!GO:0030529;ribonucleoprotein complex;7.44810343030524e-68!GO:0043170;macromolecule metabolic process;6.11779945328328e-67!GO:0005739;mitochondrion;1.3083938151726e-62!GO:0043233;organelle lumen;1.21186965677739e-53!GO:0031974;membrane-enclosed lumen;1.21186965677739e-53!GO:0005634;nucleus;3.72749253280177e-52!GO:0019538;protein metabolic process;1.22601778867387e-51!GO:0003723;RNA binding;5.90963513318086e-51!GO:0044428;nuclear part;2.44666010369321e-49!GO:0031090;organelle membrane;2.50478295206072e-49!GO:0005840;ribosome;1.92177082730779e-45!GO:0044260;cellular macromolecule metabolic process;9.82790646294722e-45!GO:0044267;cellular protein metabolic process;1.86266687591009e-44!GO:0016043;cellular component organization and biogenesis;6.65179682926065e-43!GO:0044429;mitochondrial part;2.85464230557119e-41!GO:0006412;translation;8.787092212083e-41!GO:0003735;structural constituent of ribosome;1.79963331881064e-40!GO:0031967;organelle envelope;1.11380905978534e-37!GO:0031975;envelope;2.72995115272142e-37!GO:0015031;protein transport;6.50118512800905e-37!GO:0043234;protein complex;3.31896324427317e-36!GO:0005829;cytosol;7.19262802714202e-36!GO:0043283;biopolymer metabolic process;9.85762950852451e-36!GO:0033036;macromolecule localization;2.10991388737459e-35!GO:0033279;ribosomal subunit;8.28213944266376e-35!GO:0045184;establishment of protein localization;4.10031641707135e-34!GO:0008104;protein localization;3.55867273238422e-33!GO:0009058;biosynthetic process;1.44389067575419e-32!GO:0009059;macromolecule biosynthetic process;2.96567644919369e-32!GO:0006396;RNA processing;5.64251515880841e-31!GO:0044249;cellular biosynthetic process;1.4328088122063e-30!GO:0031981;nuclear lumen;1.59563505192351e-30!GO:0005740;mitochondrial envelope;5.86658617038816e-30!GO:0046907;intracellular transport;1.28849351327813e-28!GO:0065003;macromolecular complex assembly;1.90389330034441e-28!GO:0031966;mitochondrial membrane;2.27877502880592e-28!GO:0006996;organelle organization and biogenesis;2.91851989150168e-28!GO:0010467;gene expression;3.61402901845564e-28!GO:0043228;non-membrane-bound organelle;6.48084680398299e-27!GO:0043232;intracellular non-membrane-bound organelle;6.48084680398299e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.91304530139425e-27!GO:0019866;organelle inner membrane;9.24680801941642e-27!GO:0016071;mRNA metabolic process;9.27998229258006e-27!GO:0022607;cellular component assembly;5.19105970695367e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.59891192032346e-25!GO:0005743;mitochondrial inner membrane;8.30684117832642e-25!GO:0008380;RNA splicing;1.68915015552371e-24!GO:0006886;intracellular protein transport;9.18082262054707e-24!GO:0006397;mRNA processing;2.7414067395681e-22!GO:0006119;oxidative phosphorylation;2.20976643533375e-20!GO:0044445;cytosolic part;3.36233192891389e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.11827230227998e-20!GO:0005654;nucleoplasm;4.35585226857754e-19!GO:0012505;endomembrane system;7.02040791933963e-19!GO:0005783;endoplasmic reticulum;7.05308509522603e-19!GO:0044455;mitochondrial membrane part;8.4247138054543e-19!GO:0015934;large ribosomal subunit;8.4247138054543e-19!GO:0000166;nucleotide binding;8.88606561660616e-19!GO:0051649;establishment of cellular localization;1.80879103940496e-18!GO:0051641;cellular localization;2.48661681431027e-18!GO:0005681;spliceosome;2.65999409913709e-18!GO:0005794;Golgi apparatus;2.82368802338138e-18!GO:0006259;DNA metabolic process;1.50843240417253e-17!GO:0015935;small ribosomal subunit;5.23612416811233e-17!GO:0008134;transcription factor binding;6.62532916130019e-17!GO:0048770;pigment granule;1.24493706912757e-16!GO:0042470;melanosome;1.24493706912757e-16!GO:0043412;biopolymer modification;1.45847573877569e-16!GO:0044451;nucleoplasm part;2.51411688318234e-16!GO:0005746;mitochondrial respiratory chain;5.34321181129522e-16!GO:0016192;vesicle-mediated transport;7.6262448151965e-16!GO:0006464;protein modification process;1.12908174977927e-15!GO:0006512;ubiquitin cycle;1.49500243964786e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.24105872494783e-15!GO:0016462;pyrophosphatase activity;2.43021496118904e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.46157738723892e-15!GO:0031980;mitochondrial lumen;5.81413440183484e-15!GO:0005759;mitochondrial matrix;5.81413440183484e-15!GO:0016874;ligase activity;6.15690875471659e-15!GO:0007049;cell cycle;6.39362419047239e-15!GO:0017111;nucleoside-triphosphatase activity;9.84275184248981e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.106970726478e-14!GO:0006457;protein folding;1.24617245304016e-14!GO:0044432;endoplasmic reticulum part;2.18150119135872e-14!GO:0012501;programmed cell death;2.92336741890819e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.56496129563894e-14!GO:0003954;NADH dehydrogenase activity;3.56496129563894e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.56496129563894e-14!GO:0006915;apoptosis;3.93507221450332e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.75428746600499e-14!GO:0051186;cofactor metabolic process;5.43452060896626e-14!GO:0032553;ribonucleotide binding;6.52855248850545e-14!GO:0032555;purine ribonucleotide binding;6.52855248850545e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.20349956538559e-13!GO:0017076;purine nucleotide binding;1.48214702492472e-13!GO:0043687;post-translational protein modification;1.49086999381465e-13!GO:0043285;biopolymer catabolic process;1.73554982158502e-13!GO:0022618;protein-RNA complex assembly;2.37745874524146e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.59198971905649e-13!GO:0044265;cellular macromolecule catabolic process;3.40773856086757e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.36193319679787e-12!GO:0019941;modification-dependent protein catabolic process;1.78333715322648e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.78333715322648e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.84943210821788e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.42813941135579e-12!GO:0042773;ATP synthesis coupled electron transport;2.42813941135579e-12!GO:0044257;cellular protein catabolic process;2.68984379400418e-12!GO:0006511;ubiquitin-dependent protein catabolic process;2.91668311348119e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.91668311348119e-12!GO:0045271;respiratory chain complex I;2.91668311348119e-12!GO:0005747;mitochondrial respiratory chain complex I;2.91668311348119e-12!GO:0009057;macromolecule catabolic process;3.2693383113248e-12!GO:0008219;cell death;3.51784877997187e-12!GO:0016265;death;3.51784877997187e-12!GO:0030163;protein catabolic process;4.9706835635422e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.31865793314245e-12!GO:0006605;protein targeting;9.16728238694561e-12!GO:0005730;nucleolus;1.24191834825131e-11!GO:0048193;Golgi vesicle transport;1.31664666024401e-11!GO:0008135;translation factor activity, nucleic acid binding;2.18967289993814e-11!GO:0005761;mitochondrial ribosome;2.48881778381545e-11!GO:0000313;organellar ribosome;2.48881778381545e-11!GO:0044248;cellular catabolic process;3.14761759319174e-11!GO:0050794;regulation of cellular process;3.32001519921235e-11!GO:0003712;transcription cofactor activity;3.66114061901059e-11!GO:0022402;cell cycle process;5.79628231874998e-11!GO:0003676;nucleic acid binding;6.19268631818875e-11!GO:0051082;unfolded protein binding;8.81752309830044e-11!GO:0006461;protein complex assembly;1.08815653258142e-10!GO:0006732;coenzyme metabolic process;2.8490147210079e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;3.08012583135658e-10!GO:0000375;RNA splicing, via transesterification reactions;3.08012583135658e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.08012583135658e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.44058837896194e-10!GO:0016070;RNA metabolic process;4.88825457868925e-10!GO:0008639;small protein conjugating enzyme activity;5.3815968387704e-10!GO:0005789;endoplasmic reticulum membrane;6.49101509801135e-10!GO:0004842;ubiquitin-protein ligase activity;1.01410186483805e-09!GO:0005793;ER-Golgi intermediate compartment;1.36568560898712e-09!GO:0032559;adenyl ribonucleotide binding;1.42692618933082e-09!GO:0005773;vacuole;1.43817488204704e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.48627235613189e-09!GO:0005524;ATP binding;1.72597819067462e-09!GO:0009055;electron carrier activity;1.95616735319401e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.37189133034812e-09!GO:0048523;negative regulation of cellular process;2.49660925953246e-09!GO:0019787;small conjugating protein ligase activity;2.76923874255573e-09!GO:0051726;regulation of cell cycle;2.7943622131146e-09!GO:0008565;protein transporter activity;2.79644004726111e-09!GO:0009150;purine ribonucleotide metabolic process;2.91803705426653e-09!GO:0006163;purine nucleotide metabolic process;3.1863863652826e-09!GO:0030554;adenyl nucleotide binding;3.38498005557109e-09!GO:0009259;ribonucleotide metabolic process;4.15835755376809e-09!GO:0000074;regulation of progression through cell cycle;4.24648439290007e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;4.67605554650178e-09!GO:0016023;cytoplasmic membrane-bound vesicle;5.13097193702362e-09!GO:0005635;nuclear envelope;5.1318087072131e-09!GO:0042981;regulation of apoptosis;6.09153543978344e-09!GO:0043067;regulation of programmed cell death;6.55460912107381e-09!GO:0031988;membrane-bound vesicle;7.04254797132615e-09!GO:0006793;phosphorus metabolic process;8.71345307963786e-09!GO:0006796;phosphate metabolic process;8.71345307963786e-09!GO:0016604;nuclear body;1.08413066921209e-08!GO:0003743;translation initiation factor activity;1.10563528388152e-08!GO:0006446;regulation of translational initiation;1.24273198098022e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.36622930946259e-08!GO:0000278;mitotic cell cycle;1.5567003220529e-08!GO:0003924;GTPase activity;2.01339652715152e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.17521174998601e-08!GO:0006323;DNA packaging;2.31003935311779e-08!GO:0000323;lytic vacuole;2.52899347268995e-08!GO:0005764;lysosome;2.52899347268995e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.73204375962012e-08!GO:0006164;purine nucleotide biosynthetic process;3.00219969624071e-08!GO:0005768;endosome;3.01851000549763e-08!GO:0006413;translational initiation;3.24036225650683e-08!GO:0009199;ribonucleoside triphosphate metabolic process;3.29044192764125e-08!GO:0031982;vesicle;3.89308013253602e-08!GO:0009141;nucleoside triphosphate metabolic process;3.92117051761669e-08!GO:0006366;transcription from RNA polymerase II promoter;3.9516275624945e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.00414488592613e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.00414488592613e-08!GO:0048519;negative regulation of biological process;4.22125798292357e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.38088413572289e-08!GO:0031410;cytoplasmic vesicle;5.12292611058149e-08!GO:0016881;acid-amino acid ligase activity;5.45727896828263e-08!GO:0051276;chromosome organization and biogenesis;5.45727896828263e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.0247691006116e-08!GO:0044431;Golgi apparatus part;6.25182878499171e-08!GO:0009260;ribonucleotide biosynthetic process;8.41475470977508e-08!GO:0006974;response to DNA damage stimulus;8.95980128114574e-08!GO:0016310;phosphorylation;1.00657229018819e-07!GO:0050789;regulation of biological process;1.00672439909437e-07!GO:0031252;leading edge;1.10013965640786e-07!GO:0006916;anti-apoptosis;1.14873548731235e-07!GO:0006913;nucleocytoplasmic transport;1.17185769003386e-07!GO:0009056;catabolic process;1.38126152964608e-07!GO:0031965;nuclear membrane;1.54037449345977e-07!GO:0009060;aerobic respiration;1.59140920711827e-07!GO:0005525;GTP binding;1.71546139237594e-07!GO:0007243;protein kinase cascade;1.71783687913691e-07!GO:0007264;small GTPase mediated signal transduction;1.73343064276837e-07!GO:0046034;ATP metabolic process;1.73415202504328e-07!GO:0015986;ATP synthesis coupled proton transport;1.7486284508671e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.7486284508671e-07!GO:0042254;ribosome biogenesis and assembly;2.22682574107298e-07!GO:0044453;nuclear membrane part;2.27369096507709e-07!GO:0051169;nuclear transport;2.52189866850133e-07!GO:0043069;negative regulation of programmed cell death;2.8182137361972e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.38590071703032e-07!GO:0043066;negative regulation of apoptosis;3.46083315012879e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.52690840598734e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.52690840598734e-07!GO:0005694;chromosome;5.20513451013173e-07!GO:0051188;cofactor biosynthetic process;5.40376502706688e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.53937678603957e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.53937678603957e-07!GO:0007005;mitochondrion organization and biogenesis;5.9099069175084e-07!GO:0030036;actin cytoskeleton organization and biogenesis;6.1538167290806e-07!GO:0017038;protein import;7.21056025874417e-07!GO:0016607;nuclear speck;8.77356927188227e-07!GO:0042623;ATPase activity, coupled;1.01111572987594e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.11827068900406e-06!GO:0006260;DNA replication;1.12479990148387e-06!GO:0005788;endoplasmic reticulum lumen;1.30839181962172e-06!GO:0045333;cellular respiration;1.4611388576678e-06!GO:0045786;negative regulation of progression through cell cycle;1.52925922773145e-06!GO:0030120;vesicle coat;1.56734493771184e-06!GO:0030662;coated vesicle membrane;1.56734493771184e-06!GO:0005770;late endosome;1.622118790764e-06!GO:0000785;chromatin;1.79417955299858e-06!GO:0006333;chromatin assembly or disassembly;1.93916338098193e-06!GO:0019829;cation-transporting ATPase activity;1.96246426811299e-06!GO:0048475;coated membrane;2.05932303439112e-06!GO:0030117;membrane coat;2.05932303439112e-06!GO:0051246;regulation of protein metabolic process;2.13663062725534e-06!GO:0006754;ATP biosynthetic process;2.28343012329785e-06!GO:0006753;nucleoside phosphate metabolic process;2.28343012329785e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.65495994948141e-06!GO:0016740;transferase activity;2.77626932837277e-06!GO:0016044;membrane organization and biogenesis;2.90192439168779e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.90811447467206e-06!GO:0016887;ATPase activity;2.95346399088251e-06!GO:0000139;Golgi membrane;3.20692281643554e-06!GO:0006281;DNA repair;3.2316235593524e-06!GO:0048522;positive regulation of cellular process;3.39091088589166e-06!GO:0009117;nucleotide metabolic process;3.46859581478362e-06!GO:0044427;chromosomal part;3.72369372659532e-06!GO:0032561;guanyl ribonucleotide binding;3.88242120300704e-06!GO:0019001;guanyl nucleotide binding;3.88242120300704e-06!GO:0006399;tRNA metabolic process;4.02488655584287e-06!GO:0009719;response to endogenous stimulus;5.01758059601456e-06!GO:0032446;protein modification by small protein conjugation;5.3778226408553e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.95930632503194e-06!GO:0030029;actin filament-based process;6.02183023120452e-06!GO:0006099;tricarboxylic acid cycle;6.67784624419792e-06!GO:0046356;acetyl-CoA catabolic process;6.67784624419792e-06!GO:0065004;protein-DNA complex assembly;6.85668475485693e-06!GO:0003713;transcription coactivator activity;6.88801819768374e-06!GO:0016567;protein ubiquitination;7.24183156359237e-06!GO:0045259;proton-transporting ATP synthase complex;7.85402390097386e-06!GO:0016564;transcription repressor activity;7.89390113494287e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.14856629697309e-06!GO:0003714;transcription corepressor activity;8.66955486533531e-06!GO:0019899;enzyme binding;9.73044538101255e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.1468117187432e-05!GO:0007010;cytoskeleton organization and biogenesis;1.36824876116849e-05!GO:0065002;intracellular protein transport across a membrane;1.55943370312739e-05!GO:0044440;endosomal part;1.76210249436513e-05!GO:0010008;endosome membrane;1.76210249436513e-05!GO:0051187;cofactor catabolic process;1.781419978596e-05!GO:0016568;chromatin modification;1.8045813400937e-05!GO:0006084;acetyl-CoA metabolic process;1.86677937105287e-05!GO:0005643;nuclear pore;1.92534167389388e-05!GO:0004298;threonine endopeptidase activity;2.20428584553555e-05!GO:0008092;cytoskeletal protein binding;2.24771263266579e-05!GO:0009108;coenzyme biosynthetic process;2.26456240248151e-05!GO:0003697;single-stranded DNA binding;2.35029195377601e-05!GO:0016491;oxidoreductase activity;2.44698719913331e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.44698719913331e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.44698719913331e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.44698719913331e-05!GO:0005769;early endosome;2.64961142888834e-05!GO:0000151;ubiquitin ligase complex;2.88901363434669e-05!GO:0016787;hydrolase activity;3.49249266778715e-05!GO:0045454;cell redox homeostasis;3.60532203291948e-05!GO:0065007;biological regulation;4.17959774644081e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.2410691251101e-05!GO:0051301;cell division;4.32840477268014e-05!GO:0015630;microtubule cytoskeleton;4.80119439737124e-05!GO:0007067;mitosis;4.87583414310276e-05!GO:0043038;amino acid activation;4.90516610285635e-05!GO:0006418;tRNA aminoacylation for protein translation;4.90516610285635e-05!GO:0043039;tRNA aminoacylation;4.90516610285635e-05!GO:0007265;Ras protein signal transduction;4.96710256710725e-05!GO:0000087;M phase of mitotic cell cycle;5.51405278868348e-05!GO:0019867;outer membrane;5.95497529176762e-05!GO:0009109;coenzyme catabolic process;5.97970418920158e-05!GO:0005667;transcription factor complex;6.10384623982632e-05!GO:0022403;cell cycle phase;6.94576926878146e-05!GO:0000245;spliceosome assembly;7.43582286573734e-05!GO:0016563;transcription activator activity;7.95640154330365e-05!GO:0005905;coated pit;8.13036096932965e-05!GO:0006364;rRNA processing;8.37868315835178e-05!GO:0009967;positive regulation of signal transduction;9.17016283317075e-05!GO:0043623;cellular protein complex assembly;0.000103914577765947!GO:0031968;organelle outer membrane;0.000108064271514804!GO:0007242;intracellular signaling cascade;0.000108930380481264!GO:0016072;rRNA metabolic process;0.00010953866986628!GO:0006752;group transfer coenzyme metabolic process;0.000109928702382402!GO:0008654;phospholipid biosynthetic process;0.000109928702382402!GO:0046930;pore complex;0.000111616078629808!GO:0004386;helicase activity;0.00011855248008508!GO:0048471;perinuclear region of cytoplasm;0.000118900307422428!GO:0030867;rough endoplasmic reticulum membrane;0.000137079973589037!GO:0005741;mitochondrial outer membrane;0.000138977015187676!GO:0031497;chromatin assembly;0.000139714295761614!GO:0005762;mitochondrial large ribosomal subunit;0.000141438804385978!GO:0000315;organellar large ribosomal subunit;0.000141438804385978!GO:0008026;ATP-dependent helicase activity;0.000141907157657046!GO:0006334;nucleosome assembly;0.000151133631901296!GO:0065009;regulation of a molecular function;0.000151603441059968!GO:0005774;vacuolar membrane;0.000157400534349109!GO:0005798;Golgi-associated vesicle;0.000170196886995529!GO:0051170;nuclear import;0.000174782097216746!GO:0009966;regulation of signal transduction;0.000197911520790432!GO:0033116;ER-Golgi intermediate compartment membrane;0.000228264645008909!GO:0016779;nucleotidyltransferase activity;0.000242741000586922!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000260011000749668!GO:0042802;identical protein binding;0.000260011000749668!GO:0006897;endocytosis;0.000268540829566547!GO:0010324;membrane invagination;0.000268540829566547!GO:0050657;nucleic acid transport;0.000280628307676108!GO:0051236;establishment of RNA localization;0.000280628307676108!GO:0050658;RNA transport;0.000280628307676108!GO:0051427;hormone receptor binding;0.000282231441376671!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000288776582477763!GO:0006613;cotranslational protein targeting to membrane;0.000291220900032214!GO:0006606;protein import into nucleus;0.00029125328593978!GO:0030133;transport vesicle;0.000315712914825303!GO:0031324;negative regulation of cellular metabolic process;0.000322888966511716!GO:0006403;RNA localization;0.000330980156095135!GO:0008361;regulation of cell size;0.000332832405334563!GO:0048518;positive regulation of biological process;0.000365916538044424!GO:0016049;cell growth;0.00036815949799597!GO:0003724;RNA helicase activity;0.000368309020197073!GO:0008047;enzyme activator activity;0.000393636393498563!GO:0043566;structure-specific DNA binding;0.000466941126331428!GO:0005885;Arp2/3 protein complex;0.000486177704656266!GO:0005765;lysosomal membrane;0.000492286434130899!GO:0030027;lamellipodium;0.000516477246975657!GO:0035257;nuclear hormone receptor binding;0.000539232958295642!GO:0044437;vacuolar part;0.000579727386303862!GO:0001558;regulation of cell growth;0.0005907854775731!GO:0005813;centrosome;0.000592798001557878!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000593357357253347!GO:0051329;interphase of mitotic cell cycle;0.000705056589209259!GO:0007266;Rho protein signal transduction;0.000727992009611473!GO:0006414;translational elongation;0.000757819955396049!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00078973041979809!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000855539386980008!GO:0008250;oligosaccharyl transferase complex;0.000882378916533265!GO:0005048;signal sequence binding;0.000888101643007027!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000961786855599811!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00100043060457686!GO:0019843;rRNA binding;0.00101783375325389!GO:0001726;ruffle;0.0010295033567847!GO:0005083;small GTPase regulator activity;0.00108926206877601!GO:0009165;nucleotide biosynthetic process;0.00111178046521829!GO:0005096;GTPase activator activity;0.00112815591094991!GO:0051325;interphase;0.00114774699022932!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00132365958824561!GO:0009892;negative regulation of metabolic process;0.00134212092801847!GO:0016853;isomerase activity;0.00138136986837334!GO:0043021;ribonucleoprotein binding;0.00162062608392821!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00164614188861216!GO:0006950;response to stress;0.0016525761036709!GO:0030041;actin filament polymerization;0.00176058400361217!GO:0005815;microtubule organizing center;0.00177015429658129!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00177015429658129!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00177015429658129!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00177015429658129!GO:0051789;response to protein stimulus;0.00177015429658129!GO:0006986;response to unfolded protein;0.00177015429658129!GO:0051087;chaperone binding;0.00177747548738986!GO:0030695;GTPase regulator activity;0.0017779309061119!GO:0031902;late endosome membrane;0.00183702438585531!GO:0043681;protein import into mitochondrion;0.00184594242563985!GO:0018196;peptidyl-asparagine modification;0.00192415373963874!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00192415373963874!GO:0051920;peroxiredoxin activity;0.00192415373963874!GO:0048487;beta-tubulin binding;0.00201339810066158!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00215508634077888!GO:0006509;membrane protein ectodomain proteolysis;0.0021598410379198!GO:0033619;membrane protein proteolysis;0.0021598410379198!GO:0030658;transport vesicle membrane;0.00218703036501276!GO:0004576;oligosaccharyl transferase activity;0.00228867708272435!GO:0008186;RNA-dependent ATPase activity;0.00229721300896078!GO:0007040;lysosome organization and biogenesis;0.00233470082741731!GO:0008632;apoptotic program;0.00233893592157546!GO:0048468;cell development;0.00235272889770196!GO:0001944;vasculature development;0.00235943507772122!GO:0000314;organellar small ribosomal subunit;0.00237945708541213!GO:0005763;mitochondrial small ribosomal subunit;0.00237945708541213!GO:0015980;energy derivation by oxidation of organic compounds;0.00245609981511541!GO:0044262;cellular carbohydrate metabolic process;0.00253649686516717!GO:0006979;response to oxidative stress;0.00261308052617797!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00265301048130028!GO:0015399;primary active transmembrane transporter activity;0.00265301048130028!GO:0030118;clathrin coat;0.00270910011790929!GO:0030659;cytoplasmic vesicle membrane;0.00286572824746857!GO:0016859;cis-trans isomerase activity;0.00295065368253458!GO:0016481;negative regulation of transcription;0.00298987918046715!GO:0015631;tubulin binding;0.00315781567974421!GO:0006839;mitochondrial transport;0.00318053583147434!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00330301901234444!GO:0051028;mRNA transport;0.00341908347254913!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00342763088446044!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00355558434301941!GO:0040008;regulation of growth;0.0036356965687683!GO:0006091;generation of precursor metabolites and energy;0.00363620048048575!GO:0048660;regulation of smooth muscle cell proliferation;0.00371271009383532!GO:0017166;vinculin binding;0.00379852500161721!GO:0007006;mitochondrial membrane organization and biogenesis;0.00385696654420805!GO:0016126;sterol biosynthetic process;0.00390446330952529!GO:0005791;rough endoplasmic reticulum;0.00391066167200233!GO:0043488;regulation of mRNA stability;0.0039701638923041!GO:0043487;regulation of RNA stability;0.0039701638923041!GO:0019222;regulation of metabolic process;0.00417442333827071!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00419179843040618!GO:0006402;mRNA catabolic process;0.00430088719925791!GO:0008154;actin polymerization and/or depolymerization;0.0043381370154558!GO:0006818;hydrogen transport;0.00436001480970912!GO:0003899;DNA-directed RNA polymerase activity;0.00442105144159618!GO:0046474;glycerophospholipid biosynthetic process;0.00462831881334287!GO:0046467;membrane lipid biosynthetic process;0.00470516036989879!GO:0015992;proton transport;0.00488421059693323!GO:0030132;clathrin coat of coated pit;0.00490641961326455!GO:0003729;mRNA binding;0.00492078171453615!GO:0006612;protein targeting to membrane;0.00511395816448282!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00512528852694002!GO:0001568;blood vessel development;0.00540224152154755!GO:0050790;regulation of catalytic activity;0.00540224152154755!GO:0000279;M phase;0.00557729105758247!GO:0007033;vacuole organization and biogenesis;0.00557729105758247!GO:0004004;ATP-dependent RNA helicase activity;0.00574370113887996!GO:0033673;negative regulation of kinase activity;0.00595402472787218!GO:0006469;negative regulation of protein kinase activity;0.00595402472787218!GO:0006401;RNA catabolic process;0.00607210475162779!GO:0044433;cytoplasmic vesicle part;0.00646628922487205!GO:0008139;nuclear localization sequence binding;0.00646628922487205!GO:0030660;Golgi-associated vesicle membrane;0.00650090606445405!GO:0004177;aminopeptidase activity;0.00660759725108914!GO:0051348;negative regulation of transferase activity;0.0067245663382164!GO:0003779;actin binding;0.00676529578042026!GO:0005637;nuclear inner membrane;0.00698870904526047!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00707995797567865!GO:0004674;protein serine/threonine kinase activity;0.00731683171590546!GO:0016301;kinase activity;0.00751692407206218!GO:0007050;cell cycle arrest;0.00757483535311294!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00798263948557524!GO:0016197;endosome transport;0.00812385679262875!GO:0006626;protein targeting to mitochondrion;0.00824074107566639!GO:0006891;intra-Golgi vesicle-mediated transport;0.00845781547276769!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00889710541424412!GO:0015036;disulfide oxidoreductase activity;0.00901291124569495!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00927518050075624!GO:0015002;heme-copper terminal oxidase activity;0.00927518050075624!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00927518050075624!GO:0004129;cytochrome-c oxidase activity;0.00927518050075624!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00929331334705633!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00929331334705633!GO:0006643;membrane lipid metabolic process;0.00932156020394199!GO:0043492;ATPase activity, coupled to movement of substances;0.0095200911291882!GO:0043284;biopolymer biosynthetic process;0.00974702395040773!GO:0008637;apoptotic mitochondrial changes;0.00986380374935043!GO:0005869;dynactin complex;0.00986380374935043!GO:0030119;AP-type membrane coat adaptor complex;0.00986380374935043!GO:0005684;U2-dependent spliceosome;0.00987709847042056!GO:0030663;COPI coated vesicle membrane;0.00999342144644193!GO:0030126;COPI vesicle coat;0.00999342144644193!GO:0006383;transcription from RNA polymerase III promoter;0.0101263568471595!GO:0005819;spindle;0.0104387861718304!GO:0030100;regulation of endocytosis;0.0104724495334355!GO:0005874;microtubule;0.0111755221197223!GO:0043065;positive regulation of apoptosis;0.0115815889040758!GO:0043068;positive regulation of programmed cell death;0.0115815889040758!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0118995626290081!GO:0051101;regulation of DNA binding;0.0121289782809001!GO:0006650;glycerophospholipid metabolic process;0.0121629979695562!GO:0006778;porphyrin metabolic process;0.0123289749242312!GO:0033013;tetrapyrrole metabolic process;0.0123289749242312!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.012795434162343!GO:0046489;phosphoinositide biosynthetic process;0.0128131719413177!GO:0051270;regulation of cell motility;0.0128742604486474!GO:0030833;regulation of actin filament polymerization;0.013103499134605!GO:0003746;translation elongation factor activity;0.0131373970472409!GO:0005099;Ras GTPase activator activity;0.0132119858048304!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0132800263413948!GO:0051252;regulation of RNA metabolic process;0.0133544954292657!GO:0040011;locomotion;0.0133822273429085!GO:0030521;androgen receptor signaling pathway;0.0133866980534792!GO:0030880;RNA polymerase complex;0.0134471584813318!GO:0048659;smooth muscle cell proliferation;0.0139926620635033!GO:0016363;nuclear matrix;0.0142015466257414!GO:0051059;NF-kappaB binding;0.0146627812309254!GO:0012506;vesicle membrane;0.0148088210277804!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0150481029721214!GO:0051168;nuclear export;0.0150481029721214!GO:0030131;clathrin adaptor complex;0.0155913352324084!GO:0006740;NADPH regeneration;0.0159250104410934!GO:0006098;pentose-phosphate shunt;0.0159250104410934!GO:0001836;release of cytochrome c from mitochondria;0.0159282745326371!GO:0035035;histone acetyltransferase binding;0.0161366010779627!GO:0030137;COPI-coated vesicle;0.0161642778727393!GO:0008287;protein serine/threonine phosphatase complex;0.0166129461192329!GO:0006695;cholesterol biosynthetic process;0.0168809643409738!GO:0006644;phospholipid metabolic process;0.0168809643409738!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0172931381507919!GO:0030134;ER to Golgi transport vesicle;0.0172992933381062!GO:0030125;clathrin vesicle coat;0.0173338793431395!GO:0030665;clathrin coated vesicle membrane;0.0173338793431395!GO:0016311;dephosphorylation;0.0173338793431395!GO:0031901;early endosome membrane;0.0173834122917548!GO:0000786;nucleosome;0.0175956147868234!GO:0031072;heat shock protein binding;0.0179940735670869!GO:0048500;signal recognition particle;0.0184818381699551!GO:0030518;steroid hormone receptor signaling pathway;0.0187488026511592!GO:0040012;regulation of locomotion;0.0189154678892726!GO:0051098;regulation of binding;0.019117251318714!GO:0007034;vacuolar transport;0.0193321580728981!GO:0050811;GABA receptor binding;0.0195632348377722!GO:0000059;protein import into nucleus, docking;0.0198691696289317!GO:0046483;heterocycle metabolic process;0.0198824274277118!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0199420528338131!GO:0045941;positive regulation of transcription;0.0202070656476984!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0202654058217232!GO:0030127;COPII vesicle coat;0.020888905821285!GO:0012507;ER to Golgi transport vesicle membrane;0.020888905821285!GO:0035258;steroid hormone receptor binding;0.0211850317258582!GO:0000305;response to oxygen radical;0.0215590437249767!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0216187873637263!GO:0043086;negative regulation of catalytic activity;0.0224742716057902!GO:0030145;manganese ion binding;0.0231313144850661!GO:0045926;negative regulation of growth;0.0231562465762463!GO:0042168;heme metabolic process;0.0236348342529119!GO:0006892;post-Golgi vesicle-mediated transport;0.0238977991460665!GO:0006595;polyamine metabolic process;0.0241550152850189!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0243452564596876!GO:0006352;transcription initiation;0.0249806045455789!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0251283665277841!GO:0000428;DNA-directed RNA polymerase complex;0.0251283665277841!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0254283245169794!GO:0043022;ribosome binding;0.0255550482269568!GO:0007162;negative regulation of cell adhesion;0.0258117731484839!GO:0004722;protein serine/threonine phosphatase activity;0.0261270702016141!GO:0006917;induction of apoptosis;0.0268156087024489!GO:0048514;blood vessel morphogenesis;0.0269740770799165!GO:0008033;tRNA processing;0.027016715484102!GO:0005832;chaperonin-containing T-complex;0.0274139889142897!GO:0006261;DNA-dependent DNA replication;0.0276211628576559!GO:0006497;protein amino acid lipidation;0.0276211628576559!GO:0045892;negative regulation of transcription, DNA-dependent;0.0279790816157176!GO:0030032;lamellipodium biogenesis;0.0281113960628062!GO:0006338;chromatin remodeling;0.0281559015613266!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0284554471268985!GO:0010257;NADH dehydrogenase complex assembly;0.0284554471268985!GO:0033108;mitochondrial respiratory chain complex assembly;0.0284554471268985!GO:0003684;damaged DNA binding;0.0284554471268985!GO:0016791;phosphoric monoester hydrolase activity;0.0288901042499322!GO:0051128;regulation of cellular component organization and biogenesis;0.0289174027638399!GO:0003756;protein disulfide isomerase activity;0.0291191885202938!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0291191885202938!GO:0007041;lysosomal transport;0.0291191885202938!GO:0043433;negative regulation of transcription factor activity;0.0291191885202938!GO:0030031;cell projection biogenesis;0.0291723903779869!GO:0030176;integral to endoplasmic reticulum membrane;0.0305818058771293!GO:0004680;casein kinase activity;0.0309587830338641!GO:0004860;protein kinase inhibitor activity;0.0311002473297479!GO:0012502;induction of programmed cell death;0.0311002473297479!GO:0042987;amyloid precursor protein catabolic process;0.0311609680812651!GO:0006516;glycoprotein catabolic process;0.0315970479540855!GO:0005092;GDP-dissociation inhibitor activity;0.0320297360312372!GO:0022890;inorganic cation transmembrane transporter activity;0.0323427060787064!GO:0003711;transcription elongation regulator activity;0.0328868427184187!GO:0050662;coenzyme binding;0.0336741604016932!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0338474259690022!GO:0006289;nucleotide-excision repair;0.0341019231638658!GO:0000082;G1/S transition of mitotic cell cycle;0.0349279276046087!GO:0001953;negative regulation of cell-matrix adhesion;0.0351078932708254!GO:0051287;NAD binding;0.0356143303233381!GO:0031625;ubiquitin protein ligase binding;0.035943303284803!GO:0008601;protein phosphatase type 2A regulator activity;0.035943303284803!GO:0001952;regulation of cell-matrix adhesion;0.0360527788952542!GO:0008538;proteasome activator activity;0.0363992103221203!GO:0000159;protein phosphatase type 2A complex;0.0363992103221203!GO:0006026;aminoglycan catabolic process;0.0364415245639789!GO:0006027;glycosaminoglycan catabolic process;0.0364415245639789!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0380641216133086!GO:0045047;protein targeting to ER;0.0380641216133086!GO:0022408;negative regulation of cell-cell adhesion;0.0383189037724738!GO:0000209;protein polyubiquitination;0.038365560407452!GO:0008064;regulation of actin polymerization and/or depolymerization;0.038909843087713!GO:0016272;prefoldin complex;0.0392379655599793!GO:0006779;porphyrin biosynthetic process;0.0392896814468766!GO:0033014;tetrapyrrole biosynthetic process;0.0392896814468766!GO:0045893;positive regulation of transcription, DNA-dependent;0.0396239230658562!GO:0008610;lipid biosynthetic process;0.0397869716216784!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0399836398018451!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0404038093033725!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0407924396423596!GO:0009303;rRNA transcription;0.0410536670134887!GO:0001525;angiogenesis;0.0419741668845156!GO:0046519;sphingoid metabolic process;0.0420367905120689!GO:0042158;lipoprotein biosynthetic process;0.0425079970600009!GO:0043281;regulation of caspase activity;0.042953141552157!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0431189631498456!GO:0032507;maintenance of cellular protein localization;0.0437901757958834!GO:0019904;protein domain specific binding;0.04543211233069!GO:0045792;negative regulation of cell size;0.0456329963600282!GO:0045045;secretory pathway;0.046200909891768!GO:0006220;pyrimidine nucleotide metabolic process;0.0462529408264026!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0462587534006207!GO:0005784;translocon complex;0.0464984288737982!GO:0008234;cysteine-type peptidase activity;0.0468921666868031!GO:0030308;negative regulation of cell growth;0.0475732072407344!GO:0031418;L-ascorbic acid binding;0.0476823902974102!GO:0000303;response to superoxide;0.0477637916253874!GO:0000118;histone deacetylase complex;0.0479756955679938!GO:0008312;7S RNA binding;0.0481048554578657!GO:0031272;regulation of pseudopodium formation;0.0481048554578657!GO:0031269;pseudopodium formation;0.0481048554578657!GO:0031344;regulation of cell projection organization and biogenesis;0.0481048554578657!GO:0031268;pseudopodium organization and biogenesis;0.0481048554578657!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0481048554578657!GO:0031274;positive regulation of pseudopodium formation;0.0481048554578657!GO:0006506;GPI anchor biosynthetic process;0.0487949902053244!GO:0051539;4 iron, 4 sulfur cluster binding;0.0488450524895191!GO:0018193;peptidyl-amino acid modification;0.0496220824067234!GO:0042982;amyloid precursor protein metabolic process;0.0496220824067234 | |||
|sample_id=11414 | |sample_id=11414 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=capillary | |sample_tissue=capillary | ||
|top_motifs=SOX{8,9,10}:2.57369343519;RXR{A,B,G}:1.49801485596;XCPE1{core}:1.49070225;TP53:1.37425823456;TLX1..3_NFIC{dimer}:1.21692928226;ZNF423:1.17611901054;TFAP2B:1.16419404812;NFATC1..3:1.16272869915;ZNF238:1.1426628428;ZIC1..3:1.10961642342;TFAP4:1.01321429902;IKZF1:1.00637754895;TFAP2{A,C}:1.00079379587;SP1:0.983322332799;PAX1,9:0.878660259395;EGR1..3:0.838200999427;HIC1:0.809083983137;UFEwm:0.78804598888;EBF1:0.757656365787;ZBTB6:0.749466296307;SOX2:0.732688049873;PAX6:0.708846597645;PAX5:0.689846389621;SPZ1:0.653183051181;HBP1_HMGB_SSRP1_UBTF:0.615204814153;ZNF148:0.555214705508;TEAD1:0.541366407638;ETS1,2:0.536665208689;SOX5:0.529521305414;TEF:0.523862166378;AR:0.521503441562;FOXL1:0.494833451412;PATZ1:0.483509888055;LMO2:0.44820366697;IKZF2:0.433424661997;GZF1:0.430508044266;MAZ:0.422230424373;HES1:0.418704928161;bHLH_family:0.414130950058;GATA6:0.407034868792;MYOD1:0.403748000096;POU3F1..4:0.398631873645;GATA4:0.398380025587;MTE{core}:0.389627698202;SPIB:0.388346861488;TOPORS:0.349300199407;REST:0.343130631947;HNF4A_NR2F1,2:0.298127921903;GTF2A1,2:0.279052590442;SOX17:0.275451186719;RREB1:0.238686289334;ADNP_IRX_SIX_ZHX:0.232953505894;TBP:0.229637416595;NR5A1,2:0.222110068864;NKX2-2,8:0.221455532019;TAL1_TCF{3,4,12}:0.198229845084;ELF1,2,4:0.184369560796;LHX3,4:0.181278151585;ONECUT1,2:0.170341167598;HAND1,2:0.165166428583;ALX4:0.15647165698;LEF1_TCF7_TCF7L1,2:0.141520987992;STAT2,4,6:0.140656400837;ZFP161:0.123837534112;NFKB1_REL_RELA:0.100819326402;ARID5B:0.0939880522168;FOX{D1,D2}:0.0647489466328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0604454163874;NANOG{mouse}:0.0540654298545;EVI1:0.0368548426214;SRF:0.0258533966506;ZNF384:0.0146873436614;GFI1B:0.00422523108982;FOXO1,3,4:-0.00925327138595;FOXQ1:-0.0107137912987;NKX2-3_NKX2-5:-0.0288643792622;MED-1{core}:-0.0297668337885;TFDP1:-0.0452613211856;TFCP2:-0.0606510906083;XBP1:-0.0666159784996;GTF2I:-0.0739532858428;ESR1:-0.0785841889506;ESRRA:-0.123616652886;NFE2:-0.137452611568;MEF2{A,B,C,D}:-0.139631719434;RXRA_VDR{dimer}:-0.149425181935;YY1:-0.153097237134;FOXM1:-0.165861923793;CDC5L:-0.166863476408;PITX1..3:-0.184636414806;SPI1:-0.184706586843;ATF2:-0.185583676244;SNAI1..3:-0.198395180717;IRF1,2:-0.200566131452;HNF1A:-0.244534504056;PRDM1:-0.249275544971;BACH2:-0.256024436088;MTF1:-0.260539561847;GLI1..3:-0.265683767868;KLF4:-0.27006496995;FOS_FOS{B,L1}_JUN{B,D}:-0.279877974711;SREBF1,2:-0.282389195227;FOX{F1,F2,J1}:-0.290361673405;E2F1..5:-0.296768202058;HOX{A5,B5}:-0.299158879817;NANOG:-0.304460748532;PPARG:-0.310571488293;NR6A1:-0.317928242473;EN1,2:-0.319179257532;GCM1,2:-0.323833359389;NFE2L2:-0.326819727933;CUX2:-0.331324323598;FOXD3:-0.337415819185;NR3C1:-0.359479260008;ZNF143:-0.370152282639;NHLH1,2:-0.388956785761;ZEB1:-0.4048601028;FOX{I1,J2}:-0.413117031786;FOXA2:-0.429485710006;MYB:-0.455348830547;FOSL2:-0.457002142672;NFY{A,B,C}:-0.460880755145;AIRE:-0.463041076108;ALX1:-0.475284425902;NR1H4:-0.478860423813;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.481771768838;T:-0.485221598726;SMAD1..7,9:-0.488469560091;BPTF:-0.501359840175;TBX4,5:-0.502151761657;MYFfamily:-0.511819907805;GFI1:-0.524703541066;POU6F1:-0.530059398601;HLF:-0.562734692615;HIF1A:-0.583377502549;DMAP1_NCOR{1,2}_SMARC:-0.59292326151;RBPJ:-0.614203292047;RFX1:-0.639511961742;CDX1,2,4:-0.662744799551;MZF1:-0.671515507717;FOXP1:-0.676200385764;NFE2L1:-0.678101167185;NRF1:-0.680561537551;HMGA1,2:-0.683222938474;PAX4:-0.683262878492;BREu{core}:-0.695567518903;STAT1,3:-0.69771344218;POU1F1:-0.710385018171;ZBTB16:-0.710933908132;PAX8:-0.715721951838;IRF7:-0.718849118458;TLX2:-0.720051110213;CREB1:-0.743848498037;CRX:-0.751350146568;PBX1:-0.76284241708;ATF6:-0.776926627829;JUN:-0.78100760902;RUNX1..3:-0.781854047982;EP300:-0.783582891691;CEBPA,B_DDIT3:-0.805095542444;PAX3,7:-0.824933274585;PAX2:-0.830397927844;NKX2-1,4:-0.833020091049;OCT4_SOX2{dimer}:-0.859168362478;RORA:-0.877836862422;MYBL2:-0.880904383348;ATF4:-0.886997228931;TGIF1:-0.892231990353;DBP:-0.906118831771;POU5F1:-0.918645096922;POU2F1..3:-0.94716125398;NKX3-2:-0.990994025555;NKX6-1,2:-1.01128526049;HMX1:-1.01773022143;HOX{A4,D4}:-1.02518976814;FOXN1:-1.03026311363;STAT5{A,B}:-1.04507873598;FOXP3:-1.07408076918;AHR_ARNT_ARNT2:-1.08106596288;ELK1,4_GABP{A,B1}:-1.14969688083;ATF5_CREB3:-1.23937028529;NKX3-1:-1.25560340721;HSF1,2:-1.27247923135;NFIX:-1.29741358723;PRRX1,2:-1.30424022856;RFX2..5_RFXANK_RFXAP:-1.3250668206;NFIL3:-1.36410025851;PDX1:-1.37488474949;MAFB:-1.38707178753;VSX1,2:-1.42110617202;HOX{A6,A7,B6,B7}:-1.45976703797;HOXA9_MEIS1:-2.24482890671 | |top_motifs=SOX{8,9,10}:2.57369343519;RXR{A,B,G}:1.49801485596;XCPE1{core}:1.49070225;TP53:1.37425823456;TLX1..3_NFIC{dimer}:1.21692928226;ZNF423:1.17611901054;TFAP2B:1.16419404812;NFATC1..3:1.16272869915;ZNF238:1.1426628428;ZIC1..3:1.10961642342;TFAP4:1.01321429902;IKZF1:1.00637754895;TFAP2{A,C}:1.00079379587;SP1:0.983322332799;PAX1,9:0.878660259395;EGR1..3:0.838200999427;HIC1:0.809083983137;UFEwm:0.78804598888;EBF1:0.757656365787;ZBTB6:0.749466296307;SOX2:0.732688049873;PAX6:0.708846597645;PAX5:0.689846389621;SPZ1:0.653183051181;HBP1_HMGB_SSRP1_UBTF:0.615204814153;ZNF148:0.555214705508;TEAD1:0.541366407638;ETS1,2:0.536665208689;SOX5:0.529521305414;TEF:0.523862166378;AR:0.521503441562;FOXL1:0.494833451412;PATZ1:0.483509888055;LMO2:0.44820366697;IKZF2:0.433424661997;GZF1:0.430508044266;MAZ:0.422230424373;HES1:0.418704928161;bHLH_family:0.414130950058;GATA6:0.407034868792;MYOD1:0.403748000096;POU3F1..4:0.398631873645;GATA4:0.398380025587;MTE{core}:0.389627698202;SPIB:0.388346861488;TOPORS:0.349300199407;REST:0.343130631947;HNF4A_NR2F1,2:0.298127921903;GTF2A1,2:0.279052590442;SOX17:0.275451186719;RREB1:0.238686289334;ADNP_IRX_SIX_ZHX:0.232953505894;TBP:0.229637416595;NR5A1,2:0.222110068864;NKX2-2,8:0.221455532019;TAL1_TCF{3,4,12}:0.198229845084;ELF1,2,4:0.184369560796;LHX3,4:0.181278151585;ONECUT1,2:0.170341167598;HAND1,2:0.165166428583;ALX4:0.15647165698;LEF1_TCF7_TCF7L1,2:0.141520987992;STAT2,4,6:0.140656400837;ZFP161:0.123837534112;NFKB1_REL_RELA:0.100819326402;ARID5B:0.0939880522168;FOX{D1,D2}:0.0647489466328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0604454163874;NANOG{mouse}:0.0540654298545;EVI1:0.0368548426214;SRF:0.0258533966506;ZNF384:0.0146873436614;GFI1B:0.00422523108982;FOXO1,3,4:-0.00925327138595;FOXQ1:-0.0107137912987;NKX2-3_NKX2-5:-0.0288643792622;MED-1{core}:-0.0297668337885;TFDP1:-0.0452613211856;TFCP2:-0.0606510906083;XBP1:-0.0666159784996;GTF2I:-0.0739532858428;ESR1:-0.0785841889506;ESRRA:-0.123616652886;NFE2:-0.137452611568;MEF2{A,B,C,D}:-0.139631719434;RXRA_VDR{dimer}:-0.149425181935;YY1:-0.153097237134;FOXM1:-0.165861923793;CDC5L:-0.166863476408;PITX1..3:-0.184636414806;SPI1:-0.184706586843;ATF2:-0.185583676244;SNAI1..3:-0.198395180717;IRF1,2:-0.200566131452;HNF1A:-0.244534504056;PRDM1:-0.249275544971;BACH2:-0.256024436088;MTF1:-0.260539561847;GLI1..3:-0.265683767868;KLF4:-0.27006496995;FOS_FOS{B,L1}_JUN{B,D}:-0.279877974711;SREBF1,2:-0.282389195227;FOX{F1,F2,J1}:-0.290361673405;E2F1..5:-0.296768202058;HOX{A5,B5}:-0.299158879817;NANOG:-0.304460748532;PPARG:-0.310571488293;NR6A1:-0.317928242473;EN1,2:-0.319179257532;GCM1,2:-0.323833359389;NFE2L2:-0.326819727933;CUX2:-0.331324323598;FOXD3:-0.337415819185;NR3C1:-0.359479260008;ZNF143:-0.370152282639;NHLH1,2:-0.388956785761;ZEB1:-0.4048601028;FOX{I1,J2}:-0.413117031786;FOXA2:-0.429485710006;MYB:-0.455348830547;FOSL2:-0.457002142672;NFY{A,B,C}:-0.460880755145;AIRE:-0.463041076108;ALX1:-0.475284425902;NR1H4:-0.478860423813;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.481771768838;T:-0.485221598726;SMAD1..7,9:-0.488469560091;BPTF:-0.501359840175;TBX4,5:-0.502151761657;MYFfamily:-0.511819907805;GFI1:-0.524703541066;POU6F1:-0.530059398601;HLF:-0.562734692615;HIF1A:-0.583377502549;DMAP1_NCOR{1,2}_SMARC:-0.59292326151;RBPJ:-0.614203292047;RFX1:-0.639511961742;CDX1,2,4:-0.662744799551;MZF1:-0.671515507717;FOXP1:-0.676200385764;NFE2L1:-0.678101167185;NRF1:-0.680561537551;HMGA1,2:-0.683222938474;PAX4:-0.683262878492;BREu{core}:-0.695567518903;STAT1,3:-0.69771344218;POU1F1:-0.710385018171;ZBTB16:-0.710933908132;PAX8:-0.715721951838;IRF7:-0.718849118458;TLX2:-0.720051110213;CREB1:-0.743848498037;CRX:-0.751350146568;PBX1:-0.76284241708;ATF6:-0.776926627829;JUN:-0.78100760902;RUNX1..3:-0.781854047982;EP300:-0.783582891691;CEBPA,B_DDIT3:-0.805095542444;PAX3,7:-0.824933274585;PAX2:-0.830397927844;NKX2-1,4:-0.833020091049;OCT4_SOX2{dimer}:-0.859168362478;RORA:-0.877836862422;MYBL2:-0.880904383348;ATF4:-0.886997228931;TGIF1:-0.892231990353;DBP:-0.906118831771;POU5F1:-0.918645096922;POU2F1..3:-0.94716125398;NKX3-2:-0.990994025555;NKX6-1,2:-1.01128526049;HMX1:-1.01773022143;HOX{A4,D4}:-1.02518976814;FOXN1:-1.03026311363;STAT5{A,B}:-1.04507873598;FOXP3:-1.07408076918;AHR_ARNT_ARNT2:-1.08106596288;ELK1,4_GABP{A,B1}:-1.14969688083;ATF5_CREB3:-1.23937028529;NKX3-1:-1.25560340721;HSF1,2:-1.27247923135;NFIX:-1.29741358723;PRRX1,2:-1.30424022856;RFX2..5_RFXANK_RFXAP:-1.3250668206;NFIL3:-1.36410025851;PDX1:-1.37488474949;MAFB:-1.38707178753;VSX1,2:-1.42110617202;HOX{A6,A7,B6,B7}:-1.45976703797;HOXA9_MEIS1:-2.24482890671 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11414-118F1;search_select_hide=table117:FF:11414-118F1 | |||
}} | }} | ||
Latest revision as of 17:59, 4 June 2020
| Name: | Endothelial Cells - Microvascular, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12024 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12024
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12024
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.422 |
| 10 | 10 | 0.0721 |
| 100 | 100 | 0.222 |
| 101 | 101 | 0.0846 |
| 102 | 102 | 0.611 |
| 103 | 103 | 0.96 |
| 104 | 104 | 0.876 |
| 105 | 105 | 0.296 |
| 106 | 106 | 0.0578 |
| 107 | 107 | 0.00983 |
| 108 | 108 | 0.349 |
| 109 | 109 | 0.39 |
| 11 | 11 | 0.507 |
| 110 | 110 | 0.306 |
| 111 | 111 | 0.672 |
| 112 | 112 | 0.709 |
| 113 | 113 | 0.202 |
| 114 | 114 | 0.995 |
| 115 | 115 | 0.281 |
| 116 | 116 | 0.556 |
| 117 | 117 | 0.854 |
| 118 | 118 | 0.908 |
| 119 | 119 | 0.286 |
| 12 | 12 | 0.849 |
| 120 | 120 | 0.0713 |
| 121 | 121 | 0.998 |
| 122 | 122 | 0.905 |
| 123 | 123 | 0.163 |
| 124 | 124 | 0.00486 |
| 125 | 125 | 0.615 |
| 126 | 126 | 0.711 |
| 127 | 127 | 0.223 |
| 128 | 128 | 0.865 |
| 129 | 129 | 0.343 |
| 13 | 13 | 0.587 |
| 130 | 130 | 0.403 |
| 131 | 131 | 0.0415 |
| 132 | 132 | 0.017 |
| 133 | 133 | 0.0235 |
| 134 | 134 | 0.917 |
| 135 | 135 | 0.903 |
| 136 | 136 | 0.014 |
| 137 | 137 | 0.102 |
| 138 | 138 | 0.837 |
| 139 | 139 | 0.713 |
| 14 | 14 | 0.672 |
| 140 | 140 | 0.105 |
| 141 | 141 | 1 |
| 142 | 142 | 0.746 |
| 143 | 143 | 0.637 |
| 144 | 144 | 0.825 |
| 145 | 145 | 0.276 |
| 146 | 146 | 0.517 |
| 147 | 147 | 0.0837 |
| 148 | 148 | 0.249 |
| 149 | 149 | 0.143 |
| 15 | 15 | 0.236 |
| 150 | 150 | 0.0632 |
| 151 | 151 | 0.754 |
| 152 | 152 | 0.00642 |
| 153 | 153 | 0.536 |
| 154 | 154 | 0.0798 |
| 155 | 155 | 0.793 |
| 156 | 156 | 0.428 |
| 157 | 157 | 1 |
| 158 | 158 | 0.147 |
| 159 | 159 | 0.859 |
| 16 | 16 | 0.675 |
| 160 | 160 | 0.14 |
| 161 | 161 | 0.741 |
| 162 | 162 | 0.743 |
| 163 | 163 | 0.7 |
| 164 | 164 | 0.302 |
| 165 | 165 | 0.112 |
| 166 | 166 | 0.588 |
| 167 | 167 | 0.178 |
| 168 | 168 | 0.709 |
| 169 | 169 | 0.0949 |
| 17 | 17 | 0.322 |
| 18 | 18 | 0.272 |
| 19 | 19 | 0.204 |
| 2 | 2 | 0.822 |
| 20 | 20 | 0.672 |
| 21 | 21 | 0.83 |
| 22 | 22 | 0.268 |
| 23 | 23 | 0.932 |
| 24 | 24 | 0.951 |
| 25 | 25 | 0.131 |
| 26 | 26 | 0.674 |
| 27 | 27 | 0.299 |
| 28 | 28 | 0.157 |
| 29 | 29 | 0.437 |
| 3 | 3 | 0.737 |
| 30 | 30 | 0.992 |
| 31 | 31 | 0.378 |
| 32 | 32 | 0.179 |
| 33 | 33 | 0.317 |
| 34 | 34 | 0.404 |
| 35 | 35 | 0.184 |
| 36 | 36 | 0.152 |
| 37 | 37 | 0.535 |
| 38 | 38 | 0.336 |
| 39 | 39 | 0.421 |
| 4 | 4 | 0.83 |
| 40 | 40 | 0.00532 |
| 41 | 41 | 0.822 |
| 42 | 42 | 0.433 |
| 43 | 43 | 0.587 |
| 44 | 44 | 0.779 |
| 45 | 45 | 0.364 |
| 46 | 46 | 0.982 |
| 47 | 47 | 0.971 |
| 48 | 48 | 0.757 |
| 49 | 49 | 0.34 |
| 5 | 5 | 0.537 |
| 50 | 50 | 0.512 |
| 51 | 51 | 0.895 |
| 52 | 52 | 0.776 |
| 53 | 53 | 0.218 |
| 54 | 54 | 0.778 |
| 55 | 55 | 0.298 |
| 56 | 56 | 0.665 |
| 57 | 57 | 0.864 |
| 58 | 58 | 0.0736 |
| 59 | 59 | 0.166 |
| 6 | 6 | 0.0643 |
| 60 | 60 | 0.877 |
| 61 | 61 | 0.202 |
| 62 | 62 | 0.119 |
| 63 | 63 | 0.667 |
| 64 | 64 | 0.85 |
| 65 | 65 | 0.27 |
| 66 | 66 | 0.744 |
| 67 | 67 | 0.951 |
| 68 | 68 | 0.0708 |
| 69 | 69 | 0.636 |
| 7 | 7 | 0.224 |
| 70 | 70 | 0.64 |
| 71 | 71 | 0.0683 |
| 72 | 72 | 0.37 |
| 73 | 73 | 0.00172 |
| 74 | 74 | 0.411 |
| 75 | 75 | 0.686 |
| 76 | 76 | 0.441 |
| 77 | 77 | 0.279 |
| 78 | 78 | 0.747 |
| 79 | 79 | 0.0191 |
| 8 | 8 | 0.0983 |
| 80 | 80 | 0.0615 |
| 81 | 81 | 0.402 |
| 82 | 82 | 0.667 |
| 83 | 83 | 0.274 |
| 84 | 84 | 0.191 |
| 85 | 85 | 0.638 |
| 86 | 86 | 0.82 |
| 87 | 87 | 0.0822 |
| 88 | 88 | 0.994 |
| 89 | 89 | 0.462 |
| 9 | 9 | 0.854 |
| 90 | 90 | 0.18 |
| 91 | 91 | 0.74 |
| 92 | 92 | 0.764 |
| 93 | 93 | 0.856 |
| 94 | 94 | 0.244 |
| 95 | 95 | 0.0571 |
| 96 | 96 | 0.446 |
| 97 | 97 | 0.354 |
| 98 | 98 | 0.811 |
| 99 | 99 | 0.0286 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12024
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000050 human microvascular endothelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
0002144 (capillary endothelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0000487 (simple squamous epithelium)
0004638 (blood vessel endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0010523 (microcirculatory vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001915 (endothelium of capillary)
0004535 (cardiovascular system)
0001982 (capillary)
0004537 (blood vasculature)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000001 (sample)
0000050 (human microvascular endothelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)
